BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00027659
         (1918 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP09717.1| unnamed protein product [Coffea canephora]            329   e-101
emb|CDP14470.1| unnamed protein product [Coffea canephora]            317   7e-96
ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein A...   277   4e-82
ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein A...   272   4e-81
ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein A...   281   1e-79
ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein A...   273   2e-77
ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein A...   267   3e-77
ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein A...   271   1e-76
ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein A...   270   2e-76
ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein A...   269   8e-76
ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein A...   267   1e-75
ref|XP_009102110.1| PREDICTED: putative ribonuclease H protein A...   265   1e-75
ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein A...   270   1e-75
ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413...   271   9e-75
ref|XP_009130050.1| PREDICTED: putative ribonuclease H protein A...   268   2e-74
ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein A...   262   6e-74
ref|XP_013650925.1| PREDICTED: uncharacterized protein LOC106355...   269   6e-74
ref|XP_010495244.1| PREDICTED: uncharacterized protein LOC104772...   266   1e-73
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...   262   2e-73
ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362...   266   2e-73

>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score =  329 bits (844), Expect = e-101
 Identities = 160/411 (38%), Positives = 243/411 (59%), Gaps = 3/411 (0%)
 Frame = -1

Query: 1798 KKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKKIGQ 1619
            +++VF ++ +++  RM +WKNK LS  GKEVL+K+V  A+PVY +SCFKLP  +CK++  
Sbjct: 15   QQQVFGYIKDSISRRMNSWKNKLLSQGGKEVLLKSVSMAMPVYTMSCFKLPNKLCKEVTS 74

Query: 1618 IVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQPNL 1439
            I +N+WW  ++G + K+HW +W ++   K  GGLGF ++  FN+AL+ K +WR++S+PNL
Sbjct: 75   IFANYWWGESEG-RNKMHWCSWGRLARDKKEGGLGFRELQNFNKALLAKQVWRVISKPNL 133

Query: 1438 LISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQAPW 1259
            L+SKVLRA+Y+   +    ++ + ASW+W+  M+ R+ ++ G R ++G+GK+  IW+  W
Sbjct: 134  LVSKVLRAKYFHKESIFKCKIPKCASWIWQSLMNVRDFVRKGTRRKIGNGKATNIWEDNW 193

Query: 1258 IPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVKRDR 1079
            IP N   + +TV P   +   V EL+S  G  W   +V  +FN  D+ +IL I      R
Sbjct: 194  IPGNKDGKVTTVMPQSCNIRRVEELIS--GFRWRIPLVSRIFNRKDAKEILDIPISIAGR 251

Query: 1078 RDKLVWHFEDKGKFTVKSTYHQL---ISNKISKMDLAESSGNAGLHQSIRKRSWGLKIKS 908
             D   W     G +TV S Y  L    S    + D    + +A  ++   K  W LK+KS
Sbjct: 252  EDSNYWLHSGSGTYTVNSGYKALCQETSQHKGRRDNEAGTSSANSNEKQWKWLWKLKVKS 311

Query: 907  KIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLAPI 728
            KIKHF+W+  +G+LP  + V  R            ++ E+IEH+FF+C RAQ VWK+API
Sbjct: 312  KIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSRAQEVWKMAPI 371

Query: 727  QWDGLENMTDSFPVWWGKICGLNGNPCSVRRIQLTSYLLWWLWKTRNLWVF 575
            QWDGL   T +  VWW  +            ++LT  +LW +WK RN W F
Sbjct: 372  QWDGLTEQTRNILVWWNSMLEATNRIEGREHVELTVNILWQIWKRRNEWKF 422


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score =  317 bits (812), Expect = 7e-96
 Identities = 159/418 (38%), Positives = 241/418 (57%), Gaps = 6/418 (1%)
 Frame = -1

Query: 1804 RSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKKI 1625
            R+K+++F F+ E +  +M +W+NK LS AGKEV++KAV  A+P Y +S FKLP  +CK I
Sbjct: 55   RTKEQIFGFIKENIKRKMHDWRNKLLSTAGKEVMLKAVSMAMPTYAMSVFKLPRKLCKDI 114

Query: 1624 GQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQP 1445
              +++N+WW G    K KLHW +W K+++ ++AGGLGF DI  +N+AL+ K +WRIL++P
Sbjct: 115  SALMANYWW-GEANGKNKLHWLSWRKMSLSRNAGGLGFKDIEAYNKALLGKQVWRILTKP 173

Query: 1444 NLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQA 1265
            NLLISKVLRARY+P  + L+   KQ+ASW+W+  +  R  ++ G+   +G+G+S  IW  
Sbjct: 174  NLLISKVLRARYFPKDSILTCRPKQNASWIWQGLLGARRVVEKGVIRRIGNGRSTSIWGH 233

Query: 1264 PWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVKR 1085
             WIP +   R +++ P   +   V+EL+S   + W ++ +   FN+ D+ KIL I     
Sbjct: 234  RWIPGSSSGRPTSLGPQSYNLKMVNELIS--HHRWKRNTIFQHFNQSDAEKILNIPLSLM 291

Query: 1084 DRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLA-ESSGNAGLHQSIRKRS-----WG 923
             R D   W     G +TV S Y  ++  + +   +A E +G +   +  + R      W 
Sbjct: 292  GREDNYYWQHNPGGIYTVSSGYKCIMKERTNVKQIAPEEAGPSITGEDQQSRQMWTTLWK 351

Query: 922  LKIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVW 743
            L IK K+K F+WKC +G LP    +  +            ++ ET+EH+   C  +Q VW
Sbjct: 352  LNIKHKVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQVW 411

Query: 742  KLAPIQWDGLENMTDSFPVWWGKICGLNGNPCSVRRIQLTSYLLWWLWKTRNLWVFED 569
            K APIQWDG  +    F  WW +I         +  I LT+ +LW LWK RN   FE+
Sbjct: 412  KAAPIQWDGAMDQKGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLWKERNSKEFEN 469


>ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 524

 Score =  277 bits (708), Expect = 4e-82
 Identities = 151/445 (33%), Positives = 239/445 (53%), Gaps = 10/445 (2%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            GR K E+FQ+++  V +  + W  KFLS  GKEVL+KAV  A+P++ ++ F+LP  IC +
Sbjct: 24   GRKKSEMFQYIINKVKAATQGWNKKFLSHGGKEVLLKAVALAMPIFSMNVFRLPRNICDE 83

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I  I++ FWW   D  K  +HW +W ++++PK  GGLGF D+  FN+AL+ K +WRI+  
Sbjct: 84   INSILAKFWWGSGD--KTGMHWYSWKRVSVPKREGGLGFRDLEKFNQALLGKQVWRIIQN 141

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P  L++++++ARY+PDGN  +  +K+ +S+ W+  +  R+ LK G+RF +GDG ++ +W 
Sbjct: 142  PQCLMARIIKARYFPDGNIFTATIKRKSSYAWKSLIYGRDLLKRGMRFIIGDGSTVNMWA 201

Query: 1267 APWIPEN----HQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRI 1100
             PW+P +     + R  T   + +  + +      DG  WN D ++     +D   IL +
Sbjct: 202  DPWLPVHPPRAPRSRNGTQALESVRNYMLE-----DGTGWNIDKLRDNVVPEDVEVILSL 256

Query: 1099 SSVKRDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGL 920
                  + D L WH+ D G +TVKS Y   +S  +   D+ E      L   I++R W +
Sbjct: 257  KISSNAQLDLLGWHYTDDGIYTVKSGY--WLSTHLPDNDIIEPIWGDPL---IKQRVWKM 311

Query: 919  KIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWK 740
                KIKHFLWK  S  L   +N+K R              +ET +H+ F C  AQ +W+
Sbjct: 312  NSPPKIKHFLWKTLSRSLAVGSNLKRRHITRYDQCMRCCSAIETEQHMLFDCPYAQKIWR 371

Query: 739  LAPIQWDGLENMTDSFPVWWGKI--CGLNGNPCSVRRIQ-LTSYLLWWLWKTRNLWVFED 569
             + I  + +     S+     KI  C       S+  I+ L  YLLW +WK+RN+ +F+ 
Sbjct: 372  ASGISSNIING---SYSTLEEKIEACLTCNRSSSLTHIKDLPIYLLWRIWKSRNMMMFQQ 428

Query: 568  ---IWTPEIHTVDAAVMECWEFHNQ 503
                W   IH  +A   E W  ++Q
Sbjct: 429  RNIQWWSVIHQANADAAE-WSKYSQ 452


>ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 459

 Score =  272 bits (696), Expect = 4e-81
 Identities = 152/445 (34%), Positives = 237/445 (53%), Gaps = 10/445 (2%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            GR K E+FQ+++  V +  + W  KFLS  GKEVL+KAV  A+P++ ++ F+LP  IC +
Sbjct: 24   GRKKSEMFQYIINKVKAATQGWNKKFLSHGGKEVLLKAVALAMPIFSMNVFRLPRNICDE 83

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I  I++ FWW    G K  +HW +W ++++PK  GGLGF D+  FN+AL+ K +WRI+  
Sbjct: 84   INSILAKFWWGS--GVKKGMHWYSWKRVSVPKREGGLGFRDLEKFNQALLGKQVWRIIQN 141

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P  L++++++ARY+PDGN  +  +K+ +S+ W+  +  R+ LK G+RF +GDG ++ +W 
Sbjct: 142  PQCLMARIIKARYFPDGNTFTATIKRKSSYAWKSLIYGRDLLKRGMRFIIGDGSTVNMWA 201

Query: 1267 APWI----PENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRI 1100
             PW+    P   + R  T   +      V   +  DG  WN D ++     +D   IL +
Sbjct: 202  DPWLQVHPPIAPRSRNGTQVLES-----VRNYMKEDGTGWNIDKLRDNVVPEDVEVILSL 256

Query: 1099 SSVKRDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGL 920
                  + D L WH+ D G +TVKS Y   +S  +   D+ E      L   I++R W +
Sbjct: 257  KISSNAQLDLLGWHYTDDGIYTVKSGY--WLSTHLPDNDIIEPIWGDPL---IKQRVWKM 311

Query: 919  KIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWK 740
                KIKHFLWK  S  L   +N+K R              +ET +H+ F C  AQ +W+
Sbjct: 312  NSPPKIKHFLWKTLSRSLVVGSNLKRRHITRYDQCMRCCSAIETEQHMLFDCPYAQKIWR 371

Query: 739  LAPIQWDGLENMTDSFPVWWGKI--CGLNGNPCSVRRIQ-LTSYLLWWLWKTRNLWVFED 569
             + I  + +     S+     KI  C       S+  I+ L  YLLW +WK+RN+ +F+ 
Sbjct: 372  ASGISSNIING---SYSTLEEKIEACLTCNRSSSLAHIKDLPIYLLWRIWKSRNMMMFQQ 428

Query: 568  ---IWTPEIHTVDAAVMECWEFHNQ 503
                W   IH  +A   E W  ++Q
Sbjct: 429  RNIQWWSVIHQANADAAE-WSKYSQ 452


>ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 961

 Score =  281 bits (718), Expect = 1e-79
 Identities = 155/419 (36%), Positives = 218/419 (52%), Gaps = 5/419 (1%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G SKK VF  + E + SRM  W  +FLS AGKE+LIKAV  A+P Y +SCFKLP G+CK 
Sbjct: 336  GLSKKAVFGEIRERIESRMVGWAEQFLSQAGKEILIKAVAMAMPNYAMSCFKLPIGVCKD 395

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I + V N+WW G+ G +  +HW AW+KI   K  GGLGF DI  FN AL+ K  WRI  Q
Sbjct: 396  IEKAVRNYWWRGS-GDRKGIHWVAWEKIRSQKRNGGLGFKDIQCFNLALLAKIGWRITLQ 454

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P+ L++ VLR +Y+P   F      +  SW W+     R+ L  G+R+ VGDG  I I +
Sbjct: 455  PBSLJANVLREKYFPGKTFREASGGRGTSWGWKGIFEARKVLDKGIRWRVGDGNCINIRE 514

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PW P+   F+      + L    V +L+      W  D+VK  F E D + IL I   +
Sbjct: 515  DPWFPKPSTFKARV--XEGLQAIMVRDLIDPGSREWKTDMVKGGFLEKDVTSILSIPLSR 572

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTYHQLI----SNKISKMDLAESSGNAGLHQSIRKRSWGL 920
                D L+WH    G++TV++ Y   +    +  + K      S    L   +  + W L
Sbjct: 573  YGMSDXLIWHHXRNGEYTVRTGYGVALGLMENGDMGKKGRGMPSSAPSL-SHVWNKIWNL 631

Query: 919  KIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWK 740
            ++ +K+K F+WKC +  L    N+K R               ET  H+FF+C  + I W 
Sbjct: 632  EVPNKMKFFVWKCCNNALAVRRNLKRRXLRVXNFCEGCMQPDETENHLFFRCEISHIFWF 691

Query: 739  LAPIQWDGLENMTDSFPVWWGKICG-LNGNPCSVRRIQLTSYLLWWLWKTRNLWVFEDI 566
             +P+Q + LE   + F   WG  CG + G       +Q   + LW LWK RN  +F+ +
Sbjct: 692  CSPLQINSLELEGNDFLASWGSFCGRVKGKENEXELMQEFVFGLWHLWKNRNDLIFKGV 750


>ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 866

 Score =  273 bits (698), Expect = 2e-77
 Identities = 149/435 (34%), Positives = 238/435 (54%), Gaps = 3/435 (0%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            GR K E+ ++V E V ++ + W+NKFLS  GKEVLIK+V  A  VY ++ FKLP  +C++
Sbjct: 258  GRKKAEILKYVTEKVKTKTQGWQNKFLSPGGKEVLIKSVASATSVYPMNTFKLPKSVCEE 317

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I  I++ FWW  +DGSK  +HW AW+++++PK  GG+GF DI  FN+AL+ K  WRIL++
Sbjct: 318  INNILATFWWGKDDGSKG-MHWFAWNRMSLPKKEGGMGFRDIEKFNDALLGKQAWRILTK 376

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            PN L+++V++ RY+P  + L+    +  S++WR  +  ++ L  G+R  +G+G +I  W 
Sbjct: 377  PNSLMARVMKGRYFPSTSILNARETRQNSYIWRSILHGKDLLTKGVRCVIGNGNTIDTWT 436

Query: 1267 APWIPENHQFRTSTVPPDDLH-PFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSV 1091
             PW+P N     + VP  D H    VS+ +      WN++++++  N+ D+ +IL I   
Sbjct: 437  DPWLPTNPP--RAPVPIFDQHGNSKVSDFMHRGLKEWNEELIRNTMNQADAEEILAIKLC 494

Query: 1090 KRDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGLKIK 911
              D  D+LVWH+   G +TVKS Y  L ++  +   +    G+  L Q I    W L   
Sbjct: 495  SSDEDDQLVWHYNKTGDYTVKSGY-WLATHTPNNQQVIPPPGDTQLKQLI----WKLNTA 549

Query: 910  SKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLAP 731
             K+K F+WK  +  LP   N++ R             E ET +H+FF C  AQ +W+ + 
Sbjct: 550  PKVKQFMWKMITLSLPLGKNLQRRHITNSVKCPHCYQE-ETADHLFFDCINAQCIWRASG 608

Query: 730  IQWDGLENMTDSFPVWWGKICGLNGNPCSV--RRIQLTSYLLWWLWKTRNLWVFEDIWTP 557
                GL     +      K+  L     ++     QL  ++LW +WK RN  +F+   T 
Sbjct: 609  YPNSGLLRSQVTLE---AKLSLLLNQDATIPDHLKQLPWWILWRIWKDRNKMIFQQKLTH 665

Query: 556  EIHTVDAAVMECWEF 512
              + + AA  +  E+
Sbjct: 666  WRYLLQAAYQDTKEW 680


>ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 623

 Score =  267 bits (682), Expect = 3e-77
 Identities = 147/414 (35%), Positives = 218/414 (52%), Gaps = 4/414 (0%)
 Frame = -1

Query: 1801 SKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKKIG 1622
            SKK VF  V E + +R+  W  +FLS AGKEVL+KAV  ALP Y +SCFKLP G+C+ + 
Sbjct: 2    SKKVVFAEVREKIEARLAGWSEQFLSHAGKEVLVKAVAMALPNYAMSCFKLPIGVCRDVE 61

Query: 1621 QIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQPN 1442
            + + N+WW GND  K  +HW +WD++   K  GGLGF DI  FN A + K  WRIL  P+
Sbjct: 62   RAIRNYWWRGND-QKMGVHWISWDRLMRNKKLGGLGFKDIQCFNLAFLAKIGWRILQNPS 120

Query: 1441 LLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQAP 1262
             L++ VLR +Y+PD  F      ++ SW W+     R  L+ G+R+ VGDG  I I   P
Sbjct: 121  SLLACVLREKYFPDKTFREAGKGKNTSWGWKGIFEARRVLQHGIRWRVGDGNQINIRNDP 180

Query: 1261 WIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVKRD 1082
            W P+   F     P + L    VSEL+  +  SW ++V+   F+ +D+  IL I   K  
Sbjct: 181  WFPKPTTFLVK--PRECLQETLVSELIEPNSRSWKREVILHGFSSEDTKHILSIPLSKFG 238

Query: 1081 RRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQS---IRKRSWGLKIK 911
              D+LVWH    G ++VK+ Y   +S   +     +  G    H +   + K  W L++ 
Sbjct: 239  CCDRLVWHHTVDGSYSVKTGYRVAVSLLENGALGKKGRGAPSTHHTSNQVWKGIWNLQVP 298

Query: 910  SKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLAP 731
            +KIK F+W+C +  L   +N+K R               E+  H+FF+C  +Q +W  +P
Sbjct: 299  NKIKFFIWRCCNKALAVRHNLKRRHMRIDNVCGVCNLVDESENHLFFRCDLSQRLWFCSP 358

Query: 730  IQWDGLENMTDSFPVWWGKIC-GLNGNPCSVRRIQLTSYLLWWLWKTRNLWVFE 572
            +    +E +   F   W   C  +     +   +Q  ++ LW +WK RN  VF+
Sbjct: 359  LHLYSIELIGADFLESWNNFCTSIKDREDAEAILQEFAFGLWRIWKNRNDVVFK 412


>ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 900

 Score =  271 bits (694), Expect = 1e-76
 Identities = 140/418 (33%), Positives = 238/418 (56%), Gaps = 7/418 (1%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G  K E+F +++E V S  ++WK ++LS  GKEVL+KA+  A+P++ ++ F+LP  +C +
Sbjct: 291  GSKKSEMFAYIIEKVKSVTQSWKQRYLSTGGKEVLLKAIAVAMPIFSMNIFRLPKEVCAE 350

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I  +++ FWW   D  K  LHW +WD++++PK  GGLGF D+ +FN+AL++K +WR++  
Sbjct: 351  INAVLAKFWWGAGD--KKGLHWYSWDRVSVPKREGGLGFKDLEIFNQALLSKQVWRVMQH 408

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P+ L++++L+ARY+P+ + L+ ++K+ AS+ W+  +  R+ +  G+R+ +GDG  + +W 
Sbjct: 409  PHCLMARILKARYFPEEDILNAKLKKKASYPWKSILHGRDLINKGMRYIIGDGSLVNMWT 468

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PWIP+ H  R+            V E  +  G+ WN+  ++ +  ++D  KIL +    
Sbjct: 469  DPWIPD-HPPRSPRARGVYQLEEKVREYFNTTGDQWNEQKLREMIIDEDVDKILALKISP 527

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGLKIKS 908
              ++D L WH+ + G +TVKS Y  L ++  S      + G A L   +    W  K  +
Sbjct: 528  VAQQDLLGWHYNEDGIYTVKSGY-WLGTHLPSNPPTIPTHGPAVLKHKV----WKTKAPA 582

Query: 907  KIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLAPI 728
            K+KHFLW+  S  L T NN+K R              +ET +HIFF+C  A+I+W+ +  
Sbjct: 583  KLKHFLWRVLSRSLATGNNLKRRHIIQNDQCRRCCLAIETADHIFFECPYAKIIWRAS-- 640

Query: 727  QWDGLENM--TDSFPVWWGKI-----CGLNGNPCSVRRIQLTSYLLWWLWKTRNLWVF 575
               G+ N+   +S      KI     C L+     ++   L  +LLW +WK+RN  +F
Sbjct: 641  ---GVSNLIINNSSSTLEEKIEACLQCSLSTRLSHMQ--DLPFWLLWRIWKSRNTLIF 693


>ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 896

 Score =  270 bits (691), Expect = 2e-76
 Identities = 144/417 (34%), Positives = 229/417 (54%), Gaps = 5/417 (1%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            GR K E  ++VV  V ++   W ++FLS  GKEVL K++  A PVY ++ FK+P  +C  
Sbjct: 287  GRKKTENLEYVVATVKAKTNGWHHRFLSPGGKEVLTKSIASATPVYPMNVFKMPKKVCDD 346

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I   ++ FWW  +DGSK  +HW AW ++++PK  GG+GF D   FN+AL+ K +WRIL +
Sbjct: 347  INNTLAQFWWGKSDGSKG-MHWFAWQRMSLPKKEGGMGFRDFEKFNDALLAKQVWRILIK 405

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            PN L+++VL+ +Y+P+ N L    K+ +S++W   +  +  LK GLRF +G+G+S+ +W 
Sbjct: 406  PNSLMARVLKGKYFPNSNILKAGTKKQSSYIWNSLLHGQALLKRGLRFIIGNGESVSLWA 465

Query: 1267 APWIPENHQFRTSTVPPDDLHPFW-VSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSV 1091
             PW+P +     S +P D  +P   VSEL+  +   WN+++++    E D+ +IL +   
Sbjct: 466  DPWLPTSPP--RSPIPKDQSNPMTKVSELMKQNQTGWNEELIRHTIVEADAEEILSMKLC 523

Query: 1090 KRDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGLKIK 911
                 D LVWH+   G+++VKS Y  L ++    + +    G+  L   I    W L   
Sbjct: 524  AYADTDPLVWHYNKSGEYSVKSGY-WLATHDPQDLPIEPPPGSIILKNMI----WKLPTA 578

Query: 910  SKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLA- 734
             K++HFLWK  +  LP  +N++ R             E ET EH+FF+C  AQ +W+ + 
Sbjct: 579  PKLQHFLWKMVTSSLPLGSNLQRRHVTTSVKCPHCQQE-ETTEHLFFECFYAQRIWRASG 637

Query: 733  ---PIQWDGLENMTDSFPVWWGKICGLNGNPCSVRRIQLTSYLLWWLWKTRNLWVFE 572
                I +     + D       KI  L   P  +R   L  ++LW +WK RN  +F+
Sbjct: 638  LPHNIFYQAQSTLEDKLMALLQKIPNL---PDHLR--HLPWWILWRIWKCRNKMIFQ 689


>ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 887

 Score =  269 bits (687), Expect = 8e-76
 Identities = 146/427 (34%), Positives = 229/427 (53%), Gaps = 4/427 (0%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G SKK VF+ V EA+  R+  W  +FLS AGKEV+IK V  ALP Y +SCFKLP  +CK+
Sbjct: 345  GASKKVVFEGVREALEGRINGWAEQFLSPAGKEVMIKTVAMALPNYAMSCFKLPVNLCKE 404

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            +   ++NFWW G+   K  +HW +W+K+   K  GGLGF DI+ FN A +TK  WRIL+ 
Sbjct: 405  METNIANFWWRGSR-EKNGMHWISWEKMKRRKKVGGLGFRDILSFNLAYLTKIGWRILTN 463

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P  L+ K+L+ +Y+P+ +F+  +V + +SW W+  M  +  L+ G R+ VGDG SI++  
Sbjct: 464  PLSLLGKILKEKYFPECSFMEAKVGKRSSWGWKGIMQGKRILERGRRWRVGDGSSIRVKI 523

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PW+P  H FR ++  PD   P  V +L+     SW  ++VK  F E++S+ IL I +  
Sbjct: 524  DPWLPRPHTFRVNSNHPD--MPVMVKDLIDPVTGSWMVELVKGCFEEEESNIILGIPTXL 581

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKR---SWGLK 917
                D+++WH    G +TV++ Y   +  + +     + +G         KR    W L+
Sbjct: 582  EGCDDRIIWHXTSNGDYTVRTGYGIAMDMQENXELGRKGTGGCSRRDEPBKRWMEIWRLE 641

Query: 916  IKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKL 737
            + +K+K F+W+C    L    N+  R            D  ET  H+FF+C  +++ W  
Sbjct: 642  VPNKMKFFIWRCCXSSLAVRGNLHRRRMRVNTACVLCGDARETEHHLFFECEFSRVFWFS 701

Query: 736  APIQWDGLENMTDSFPVWWGKICG-LNGNPCSVRRIQLTSYLLWWLWKTRNLWVFEDIWT 560
             P+Q D        F   W  +C         V  +Q   +++W +WK RN  +F+ +  
Sbjct: 702  CPLQLDITFASGKEFGDCWHXLCNRFRKEKNHVLILQECVFIMWRIWKCRNDLMFKGMEA 761

Query: 559  PEIHTVD 539
              + +V+
Sbjct: 762  NPMESVN 768


>ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 812

 Score =  267 bits (682), Expect = 1e-75
 Identities = 146/436 (33%), Positives = 236/436 (54%), Gaps = 4/436 (0%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G SKK VF+ V EA+  R+  W  +FLS AGKEV+IKAV  ALP Y +SCFKLP  +CK+
Sbjct: 330  GASKKAVFEGVREALDGRINGWAEQFLSPAGKEVMIKAVAIALPNYAMSCFKLPVNLCKE 389

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            +   ++NFWW G+   K  +HW +W+K+   K  GGLGF D++ FN A + K  WRIL+ 
Sbjct: 390  MESNIANFWWRGSR-EKNGMHWISWEKMKRRKKVGGLGFRDLLSFNLAYLAKIGWRILTN 448

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P  L+SK+L+ +Y+P+ +F+  +V + ++W W+  M  ++ L+ G R+ VGDG SI++  
Sbjct: 449  PLSLLSKILKXKYFPECSFMEAKVGKRSTWGWKGIMQGKKILERGRRWRVGDGSSIRVKY 508

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PW+P  H FR  +   D   P  V +L++    SW  D+VK  F E++S+ IL I +  
Sbjct: 509  DPWLPRPHTFRVISKHLD--MPVMVKDLINPVTGSWMVDLVKGCFEEEESNIILGIPTSL 566

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTYHQLIS-NKISKMDLAESSGNAGLHQSIR--KRSWGLK 917
                D+++WH    G +TVK+ Y  ++   +  ++    + G +   +  +     W LK
Sbjct: 567  EGCNDRIIWHHTSNGDYTVKTGYGIVMEMQENCELGRKRTRGCSRRDEPDKCWMEIWRLK 626

Query: 916  IKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKL 737
            + +K+K+F+W+C +  L    N+  R            D  ET  H+FF+C  +++ W  
Sbjct: 627  VPNKMKYFIWRCCTSSLAARGNLHRRRMRVNTTCVLCGDAKETEHHLFFECEFSRVFWFS 686

Query: 736  APIQWDGLENMTDSFPVWWGKICGLNGNPCSVRRI-QLTSYLLWWLWKTRNLWVFEDIWT 560
             P+Q D        F   W  +C       +   I Q   +++W +WK RN  +F+    
Sbjct: 687  CPLQLDIKLATRKDFGDCWYSLCNRFRKEKNHELILQECVFIMWRIWKCRNDLLFKGTEA 746

Query: 559  PEIHTVDAAVMECWEF 512
              + +V+    +  E+
Sbjct: 747  NPMESVNVVRSQIMEY 762


>ref|XP_009102110.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 712

 Score =  265 bits (676), Expect = 1e-75
 Identities = 140/413 (33%), Positives = 232/413 (56%), Gaps = 1/413 (0%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G  K E+F ++V+ V   +  WK K L+  GKEVL+K++  A+P++ ++ F+LP  +C++
Sbjct: 100  GSKKGEMFAYIVDKVKKVVHGWKQKHLTHGGKEVLLKSIALAMPIFSMNIFRLPKEVCEE 159

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I  I++ FWW    G    LHW AW ++ IPK  GGLGF D+  FN+AL+ K +WRI+  
Sbjct: 160  INAILARFWWG--TGESKGLHWYAWKRVCIPKREGGLGFRDLESFNQALLGKQVWRIMQN 217

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            PN L+++VLRARY+P+G+ L   +K+ +S+ W+  +  ++ +  G+R+ +G+G+S K+W 
Sbjct: 218  PNCLMARVLRARYFPEGDILKATLKKKSSYAWKSILHGKDLIVKGMRYIIGNGESTKMWT 277

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
              W+   H  R      +      VS+ +  +G  WN D ++    ++D  KIL +    
Sbjct: 278  DSWL-SLHPPRPPRSRGEVNTNSKVSDYVLNNGRGWNLDKLREDVIQEDIEKILELKISS 336

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGLKIKS 908
            + R+D + WH+ D G +TVKS Y  L+++      +  + G+  L Q +    W +K+ +
Sbjct: 337  KARQDLMGWHYTDNGLYTVKSGY-WLVTHLPDNNYIPPTYGSVALKQKL----WKVKVPA 391

Query: 907  KIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLAPI 728
            K+KHFLW+  S  + T NN+K R             E ET EH+FF C  A+ VW+ + I
Sbjct: 392  KLKHFLWRISSRSIATGNNLKRRHVTPDAICKRCWLEEETEEHLFFTCPYAKKVWRASGI 451

Query: 727  QWDGLENMTDSFPVWWGKICGLNGNPCSVRRIQ-LTSYLLWWLWKTRNLWVFE 572
                L++   ++     + C       S+   Q L  ++LW LWK+RN+ VF+
Sbjct: 452  NNLVLDSTMSTYEEKL-EACLQVSTAISLSHYQDLPIWILWRLWKSRNVLVFQ 503


>ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 1009

 Score =  270 bits (690), Expect = 1e-75
 Identities = 151/441 (34%), Positives = 238/441 (53%), Gaps = 5/441 (1%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G SK++VF+ V   +  ++  W  +FLS AGKEVLIKAV  A+P Y +SCFKLP  +CK+
Sbjct: 390  GTSKRKVFEEVRRKLDGKLHGWAEQFLSPAGKEVLIKAVAMAMPCYTMSCFKLPVTLCKE 449

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I   ++ FWW  +   K  +HW +W K++  K AGGLGF D+  FN AL+ K  WRIL  
Sbjct: 450  IEAAMARFWWKSHT-DKNGIHWASWTKLSQLKKAGGLGFRDLQCFNMALLAKIGWRILLN 508

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P+ L++ +L  +Y+   +FL+   ++S+SW W+  +  R  L+SGLR+ +GDG ++++  
Sbjct: 509  PSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILLGRRLLESGLRWRIGDGTTVQVRN 568

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PW+P  + FRT +   D   P  V EL+     +W +DV+   F  +++S IL I   +
Sbjct: 569  DPWLPTPYTFRTLSRHLD--LPSMVHELIDPLLKTWKKDVINRCFVPEEASHILSIPINR 626

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTY----HQLISNKISKMDLAESSGNAGLHQSIRKRSWGL 920
                DKL+WHF   G++TV+S Y    H   + ++ +    E+S ++    ++ K  W +
Sbjct: 627  WGCPDKLIWHFSMHGRYTVRSGYELALHLQRNGELGRKGAGEASSSSS-QSAVWKSVWHV 685

Query: 919  KIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWK 740
                K+K F+W+  S  L   +N++ R             + ET  HIFF+C  A+  W 
Sbjct: 686  DAPPKLKAFIWRGCSNFLAVRHNLRRRRVPCTGECGFCGFQDETQAHIFFECDFARAFWF 745

Query: 739  LAPIQWDGLENMTDSF-PVWWGKICGLNGNPCSVRRIQLTSYLLWWLWKTRNLWVFEDIW 563
             +P+Q D  +   D F   W   +  LN +  +   IQ   + LW +WK RNL VF+ + 
Sbjct: 746  ASPLQLDVSKLAGDDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWKARNLAVFDGVQ 805

Query: 562  TPEIHTVDAAVMECWEFHNQR 500
               I  V   + +  EF   +
Sbjct: 806  ADPIEAVLLLLKQVSEFRTAK 826


>ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413636 [Brassica napus]
          Length = 1521

 Score =  271 bits (693), Expect = 9e-75
 Identities = 141/418 (33%), Positives = 238/418 (56%), Gaps = 4/418 (0%)
 Frame = -1

Query: 1813 RHGRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGIC 1634
            + GR K E+F +++E V    + W  KFLS  GKE+L+KA+  A+P+Y ++ FKL   IC
Sbjct: 761  KFGRKKSEMFHYIIEKVKKITQGWHQKFLSPGGKEILLKAIALAMPIYSMNVFKLTKEIC 820

Query: 1633 KKIGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRIL 1454
            ++I  I++ FWW+   G K  +HW +W K+ +PK  GGLGF D+  FN+AL+ K +WRI+
Sbjct: 821  EEINGILARFWWDS--GEKKGIHWFSWKKMGLPKREGGLGFRDLENFNQALLGKQVWRIM 878

Query: 1453 SQPNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKI 1274
              P  L++++LRARY+PDG+ L+  +++ AS+ W+  +  R  +K G+RF +G+G+ I +
Sbjct: 879  QHPECLMARILRARYFPDGDILNARLQKRASYAWKSLLHGRNLVKQGMRFIIGNGELINM 938

Query: 1273 WQAPWIPENHQFRTSTVPPDDLHP----FWVSELLSWDGNSWNQDVVKSVFNEDDSSKIL 1106
            W  PWIP+ H  R    PP  L+       V+E  S D N W++  ++   + +D  KIL
Sbjct: 939  WTDPWIPD-HPPR----PPRPLNQTEEICKVNEFFSADRNHWDERKLRERIHPEDVDKIL 993

Query: 1105 RISSVKRDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSW 926
             I    + ++D + WH+ + G ++VKS Y  + S++  +  + +  G+  L Q    R W
Sbjct: 994  AIKISSKAQQDLMGWHYNEDGIYSVKSGY-WVSSHQQEQGLIYQIPGSIVLKQ----RIW 1048

Query: 925  GLKIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIV 746
             LK   K++HFLW+  S  LP  +N+K R             + E+  H+FF+C  A+++
Sbjct: 1049 KLKSPPKLQHFLWRILSQCLPVGSNLKRRHVVPDDVCQRCFQQEESELHVFFECPYAKMI 1108

Query: 745  WKLAPIQWDGLENMTDSFPVWWGKICGLNGNPCSVRRIQLTSYLLWWLWKTRNLWVFE 572
            W+ + +    + + T SF     +   +  +   +       ++LW LWK+RN+ +F+
Sbjct: 1109 WRTSGLDNAVINSSTSSFEDKIQECINIGTSTRLIHFQDQPIWILWRLWKSRNMLIFQ 1166


>ref|XP_009130050.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 1128

 Score =  268 bits (685), Expect = 2e-74
 Identities = 147/440 (33%), Positives = 244/440 (55%), Gaps = 7/440 (1%)
 Frame = -1

Query: 1804 RSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKKI 1625
            R K ++F ++V+ V +  + W  K+LS  GKEVL+K++  A+P++ ++ F+LP  +C +I
Sbjct: 518  RRKSDMFTYIVDKVKAVTQGWSQKYLSPGGKEVLLKSIALAMPIFSMNVFRLPKEVCDEI 577

Query: 1624 GQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQP 1445
             ++++ FWW    G    +HW  W ++++PKS GGLGF D+  FN+AL+ K +WRIL  P
Sbjct: 578  NRVLARFWWGS--GENKGMHWYDWKRVSLPKSEGGLGFRDLEKFNQALLGKQVWRILQNP 635

Query: 1444 NLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQA 1265
              L++++L+ARY+ DG+ LS E+K  AS+ W+  +  R+ +K G+R+ +GDG  I  W  
Sbjct: 636  GCLMARILKARYFLDGDILSAELKTKASYAWKSILYGRDLVKQGMRYIIGDGSLINTWTD 695

Query: 1264 PWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVKR 1085
            PWIP+ H  R        L    V++L S  G  W++  V++V  ++D  K+L +     
Sbjct: 696  PWIPD-HTPRAPRPRTPGLRIGKVNQLFSQYGYGWDEQKVRAVIVDEDIPKVLALKLSTT 754

Query: 1084 DRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGLKIKSK 905
             ++D L WH++D G +TVKS Y  L ++  ++  +  + GN     S++K+ W  K+ SK
Sbjct: 755  AKQDLLGWHYKDDGIYTVKSGY-WLSTHLPTRERMEPTLGN----PSLKKKIWNTKLPSK 809

Query: 904  IKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLAPIQ 725
            I HF+WK  S  + +  N+K R            +  ET +H+ F C  AQ +W+ +   
Sbjct: 810  IHHFIWKVLSRSIASGANLKRRHIMPDAQCRRCCNGDETDKHLLFDCIYAQQIWRAS--- 866

Query: 724  WDGLEN--MTDSFPVWWGKI--CGLNGNPCSVRRI-QLTSYLLWWLWKTRNLWVFEDIWT 560
              G+ N  +TD       KI  C        +R +  L  +LLW +WK+RNL +F++   
Sbjct: 867  --GISNTILTDPRASLEEKIEVCLQCCTSIHLRHLTNLPFWLLWRIWKSRNLLIFQNKQI 924

Query: 559  PEIHTVDAAVMEC--WEFHN 506
               H +  A  +   W  H+
Sbjct: 925  DGRHVLQQARRDAQEWSTHS 944


>ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 806

 Score =  262 bits (670), Expect = 6e-74
 Identities = 155/435 (35%), Positives = 221/435 (50%), Gaps = 5/435 (1%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G SKK VF  + + + +R+  W  +FLS AGKEVLIKAV   LP + +SCFKLP G+C+ 
Sbjct: 230  GLSKKAVFXEIRDKMEARLAGWSEQFLSQAGKEVLIKAVAMXLPNFAMSCFKLPIGVCRD 289

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            + + V ++WW GN   K   HW +WDK+   KSAGGLGF DI  FN A + K  WR++  
Sbjct: 290  MEKAVRSYWWRGNS-QKRGCHWASWDKLMKQKSAGGLGFKDIQCFNLAFLAKIGWRLIQN 348

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P  L++ VLR +YYP   F      ++ SW W+     R  L+ G+R+ VGDG+SI I +
Sbjct: 349  PTSLLANVLRDKYYPGKCFKDAGKGRNTSWGWKGIFESRTVLQHGVRWRVGDGESINIRK 408

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PW+P    F     P D+L    V +L+     SW + V+   FN +++  IL I   K
Sbjct: 409  DPWLPTPTTFLAK--PLDNLEEIKVRDLIDPISKSWKEGVITEGFNREEARTILSIPLSK 466

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTY----HQLISNKISKMDLAESSGNAGLHQSIRKRSWGL 920
                D+LVWH+   G ++VK+ Y    + + +  + K     SS     +    KR W L
Sbjct: 467  SGCLDRLVWHYTVNGDYSVKTGYGVAMNMMENGALGKKGRGASS-MLRKNNLTWKRIWKL 525

Query: 919  KIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWK 740
            ++ +KIK FLWKC +  L   +N++ R               E+  H+FF+C  +   W 
Sbjct: 526  QVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQCDFSHRFWF 585

Query: 739  LAPIQWDGLENMTDSFPVWWGKICGLNGNPCSVRRI-QLTSYLLWWLWKTRNLWVFEDIW 563
             +P+  +  E     F   W KIC    N      I Q  ++ LW LWK RN  VF    
Sbjct: 586  GSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQEVAFGLWRLWKNRNDVVFNG-- 643

Query: 562  TPEIHTVDAAVMECW 518
               +H     VM  W
Sbjct: 644  ---VHRQHLEVMMLW 655


>ref|XP_013650925.1| PREDICTED: uncharacterized protein LOC106355549 [Brassica napus]
          Length = 1726

 Score =  269 bits (687), Expect = 6e-74
 Identities = 149/445 (33%), Positives = 242/445 (54%), Gaps = 8/445 (1%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G  K E+F ++V+ V   +  WK K L+  GKEVL+K++  A+P++ ++ F+LP  +C++
Sbjct: 763  GSKKGEMFAYIVDKVKKVVHGWKQKHLTHGGKEVLLKSIALAMPIFSMNIFRLPKEVCEE 822

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I  I++ FWW    G    LHW AW ++ IPK  GGLGF D+  FN+AL+ K +WRI+  
Sbjct: 823  INAILARFWWG--TGESKGLHWYAWKRVCIPKREGGLGFRDLESFNQALLGKQVWRIMQN 880

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            PN L+++VLRARY+PDG+ L   +K  +S+ W+  +  +E +  G+R+ +G+G+S K+W 
Sbjct: 881  PNCLMARVLRARYFPDGDILKATLKNKSSYAWKSILYGKELIVKGMRYIIGNGESTKMWT 940

Query: 1267 APWIPENHQFRTSTVPPDDLHP-------FWVSELLSWDGNSWNQDVVKSVFNEDDSSKI 1109
              W+        S  PP    P         VS+ +  +G  WN D ++    ++D  KI
Sbjct: 941  DSWL--------SLHPPRPPRPRGEVNITSKVSDYVLNNGRGWNLDKLREDVIQEDVGKI 992

Query: 1108 LRISSVKRDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRS 929
            L +    + R+D + WH+ D G +TVKS Y  L+++      +  + G+  L Q +    
Sbjct: 993  LELKISSKARQDLMGWHYTDNGLYTVKSGY-WLVTHLPDNNYIPPTYGSVALKQKL---- 1047

Query: 928  WGLKIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQI 749
            W +K+ +K+KHFLW+  S  + T NN+K R             E ET EH+FF C  A+ 
Sbjct: 1048 WKVKVPAKLKHFLWRISSRSIATGNNLKRRHVTPDVICKRCWLEEETEEHLFFTCPYAKK 1107

Query: 748  VWKLAPIQWDGLENMTDSFPVWWGKICGLNGNPCSVRRIQ-LTSYLLWWLWKTRNLWVFE 572
            VW+ + I    L++   ++     ++C       S+   Q L  ++LW LWK+RN+ VF+
Sbjct: 1108 VWRASGINNLVLDSTVSTYEEKL-EVCLQVSTATSLCHYQDLPIWILWRLWKSRNVLVFQ 1166

Query: 571  DIWTPEIHTVDAAVMECWEFHNQRA 497
                   + + AA  +  E+ N  A
Sbjct: 1167 QRAFHWRNILSAARSDAREWRNIEA 1191


>ref|XP_010495244.1| PREDICTED: uncharacterized protein LOC104772312 [Camelina sativa]
          Length = 1200

 Score =  266 bits (681), Expect = 1e-73
 Identities = 147/415 (35%), Positives = 212/415 (51%), Gaps = 1/415 (0%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G+ K E+FQ++VE V +R + W NKFLS  GKE+L+KA+  A+PVY ++CFK+P  IC++
Sbjct: 585  GQKKIEMFQYIVEKVQNRTKGWNNKFLSHRGKEILLKAIALAMPVYTMNCFKIPKWICEE 644

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I +I++N+WWN      A +HW AWD++   K  GGLGF DI  FNEAL+ K  WRIL  
Sbjct: 645  IERIIANYWWNTQQNGNA-VHWVAWDRLKYMKKEGGLGFRDIEQFNEALLAKQAWRILQH 703

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            PN L+S++L+ RY+ D N L        S+ W+  +  R+ LK GLRF VGD  SIK W 
Sbjct: 704  PNSLMSRILKGRYFSDSNILDATRGTQPSFGWQSLLVGRDLLKKGLRFTVGDETSIKTWT 763

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PW+P +                 V+ L   + +SWN+ +V+     DD + IL I    
Sbjct: 764  DPWLPVHPPRPPRLAKNIQGDSSTVNTLFLPNRSSWNESLVRDKVYLDDVNHILLIKKSH 823

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWGLKIKS 908
               +D L WH+ + G + VKS Y         +  +    GN  L   I    W  K+  
Sbjct: 824  WQNQDYLGWHYTENGIYPVKSGYWLATHLPEQEFQVRPPYGNPQLKTDI----WKTKLPP 879

Query: 907  KIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWKLAPI 728
            K KHFLW+     L T + ++ R              +ET EH+FF C  A  +W+ + I
Sbjct: 880  KFKHFLWRMSFRTLATGDELERRHISTNPFCKRCVHVVETTEHLFFTCPNAMQIWRCSNI 939

Query: 727  QWDGLENMTDSFPVWWGKICGLNGNPCSVRRIQLTSY-LLWWLWKTRNLWVFEDI 566
                L N  +        I           R+ L  + +LW +W +RN  +F+ I
Sbjct: 940  PIRSLLNPNEHLEDKLKAILEFYKQRSHYDRLSLLPFWILWKIWTSRNKLIFQKI 994


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 883

 Score =  262 bits (670), Expect = 2e-73
 Identities = 155/435 (35%), Positives = 220/435 (50%), Gaps = 5/435 (1%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G SKK VF  + + + +R+  W  +FLS AGKEVLIKAV   LP + +SCFKLP G+C+ 
Sbjct: 258  GLSKKAVFXEIRDKMEARLAGWSEQFLSQAGKEVLIKAVAMXLPNFAMSCFKLPIGVCRD 317

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            + + V ++WW GN   K   HW +WDK+   KSAGGLGF DI  FN A + K  WR++  
Sbjct: 318  MEKAVRSYWWRGNS-QKRGCHWASWDKLMKQKSAGGLGFKDIQCFNLAFLAKIGWRLIQN 376

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P  L++ VLR +YYP   F      ++ SW W+     R  L+ G+R+ VGDG+SI I +
Sbjct: 377  PTSLLANVLRDKYYPGKCFKDAGKGRNTSWGWKGIFESRTVLQHGVRWRVGDGESINIRK 436

Query: 1267 APWIPENHQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILRISSVK 1088
             PW+P    F     P D+L    V +L+     SW + V+   FN +++  IL I   K
Sbjct: 437  DPWLPTPTTFLAK--PLDNLEEIKVRDLIDPISKSWKEGVITEGFNREEARTILSIPLSK 494

Query: 1087 RDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAG----LHQSIRKRSWGL 920
                D+LVWH+   G ++VK+ Y  +  N +    L +    A      +    KR W L
Sbjct: 495  SGCLDRLVWHYTVNGDYSVKTGY-GVAMNXMENGALGKKGRGASSMLRKNNLTWKRIWKL 553

Query: 919  KIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVWK 740
            ++ +KIK FLWKC +  L   +N++ R               E+  H+FF+C  +   W 
Sbjct: 554  QVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQCDFSHRFWF 613

Query: 739  LAPIQWDGLENMTDSFPVWWGKICGLNGNPCSVRRI-QLTSYLLWWLWKTRNLWVFEDIW 563
             +P+  +  E     F   W KIC    N      I Q  ++ LW LWK RN  VF    
Sbjct: 614  GSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQEVAFGLWRLWKNRNDVVFNG-- 671

Query: 562  TPEIHTVDAAVMECW 518
               +H     VM  W
Sbjct: 672  ---VHRQHLEVMMLW 683


>ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362852 [Brassica napus]
          Length = 1350

 Score =  266 bits (681), Expect = 2e-73
 Identities = 146/422 (34%), Positives = 229/422 (54%), Gaps = 10/422 (2%)
 Frame = -1

Query: 1807 GRSKKEVFQFVVEAVCSRMENWKNKFLSLAGKEVLIKAVLDALPVYVLSCFKLPAGICKK 1628
            G  K E+F +++E V S  ++WK K LS  GKEVL+K++  ALP+Y ++ F+LP  +C+ 
Sbjct: 738  GSKKGEMFAYIIEKVKSVTQSWKQKHLSPGGKEVLLKSIALALPIYSMNVFRLPKEVCEL 797

Query: 1627 IGQIVSNFWWNGNDGSKAKLHWKAWDKITIPKSAGGLGFHDIILFNEALMTKNLWRILSQ 1448
            I  +++ FWW    G +  +HW +W ++ +PK  GGLGF D+  FN+AL+ K +WRIL  
Sbjct: 798  INNLLAKFWWG--KGDRKGMHWYSWKRVCVPKREGGLGFRDLETFNQALLGKQVWRILQH 855

Query: 1447 PNLLISKVLRARYYPDGNFLSVEVKQSASWMWRCWMSCRETLKSGLRFEVGDGKSIKIWQ 1268
            P+ L++++L+ARY+PD   L    K  AS+ W+  +  +E +  G+++ +GDG    +W 
Sbjct: 856  PSCLMARILKARYFPDCTILEAVQKTKASYAWKSILYGKELVTKGMKYVIGDGSHANMWT 915

Query: 1267 APWIPEN-----HQFRTSTVPPDDLHPFWVSELLSWDGNSWNQDVVKSVFNEDDSSKILR 1103
             PWIP++          S+V    +  F+V     WD +   +DVV      +D  +ILR
Sbjct: 916  DPWIPDHPPRPPRALDNSSVTDCKVRDFFVVGRNEWDVSKLREDVV-----HEDVERILR 970

Query: 1102 ISSVKRDRRDKLVWHFEDKGKFTVKSTYHQLISNKISKMDLAESSGNAGLHQSIRKRSWG 923
            +      ++D + WH+ + G +TVKS Y  L ++   +  +  + GN     + ++R W 
Sbjct: 971  LKISPHAQQDLMGWHYNEDGLYTVKSGY-WLATHLPQQNLILPTFGNV----TQKQRIWK 1025

Query: 922  LKIKSKIKHFLWKCYSGILPTANNVKIRXXXXXXXXXXXXDEMETIEHIFFKCHRAQIVW 743
             K+ SKIKHF+WK  S  LPT  N+K R             E ET  H+FF C  AQ VW
Sbjct: 1026 TKVPSKIKHFVWKMLSKSLPTGENLKRRHVTQQALCRRCGLEDETEHHLFFNCPYAQCVW 1085

Query: 742  KLAPIQWDGLENM--TDSFPVWWGKICGLNGNPCSVRRIQLTS---YLLWWLWKTRNLWV 578
            + +     G+ NM  T +   +  KI        SVR   L     ++LW LWK+RN  +
Sbjct: 1086 RAS-----GISNMIITSTTTTFEEKIEACLQCSTSVRLSHLQDLPWWILWRLWKSRNQMI 1140

Query: 577  FE 572
            F+
Sbjct: 1141 FQ 1142