BLASTX nr result
ID: Rehmannia27_contig00027478
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00027478
(3080 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 320 e-155
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 305 e-148
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 286 e-142
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 279 e-141
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 278 e-141
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 283 e-137
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 270 e-136
gb|AAB82754.1| retrofit [Oryza longistaminata] 273 e-136
ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868... 256 e-135
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 270 e-135
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo... 261 e-135
emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera] 263 e-135
ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420... 268 e-135
emb|CCH50966.1| T4.5 [Malus x robusta] 246 e-134
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 273 e-134
ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513, p... 253 e-134
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 271 e-134
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 269 e-133
dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group] 271 e-133
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo... 264 e-133
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 320 bits (820), Expect(2) = e-155
Identities = 159/275 (57%), Positives = 198/275 (72%)
Frame = +1
Query: 1693 DNTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSC 1872
+N + TLIQ L F+LKDLG V FLG +RT+ G+HL Q+KY DLL KT M S
Sbjct: 694 NNVPLVQTLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKTKMHSA 753
Query: 1873 KSAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTL 2052
K PTP+ + KL F +P LYRST+GALQYLT T PDI+F VNKLSQ+LQ PT
Sbjct: 754 KPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTE 813
Query: 2053 NHWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNL 2232
HW C RVLRYLKG +H GL F P S L L+ Y DAD AS IDDRRST+GYC+FLG+NL
Sbjct: 814 LHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGYCVFLGTNL 873
Query: 2233 IAWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTL 2412
WSS+KQ VVARSST++EYRALA A+ E+ W+ SLF+ELG+SL ++ V+W DN GA L
Sbjct: 874 FTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISLVNTPVIWCDNQGAGAL 933
Query: 2413 ASNPVYHARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
A+NPV+H+RTKHIE+DV ++R ++ +KL + P
Sbjct: 934 AANPVFHSRTKHIEVDVXYVREQVLDKKLVVSYVP 968
Score = 258 bits (660), Expect(2) = e-155
Identities = 125/232 (53%), Positives = 168/232 (72%), Gaps = 7/232 (3%)
Frame = +2
Query: 1007 HPMHTMSKSGIFKPKIF-------SLAVSSSISEPTTVSEALSLPHWKSAMDEEYHVLVR 1165
HPM T SK G KPK+ S +VS S PTTVS+AL P+W + M EEY LVR
Sbjct: 458 HPMTTRSKVGTIKPKLLPDHITYLSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQALVR 517
Query: 1166 NHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVV 1345
N+TW LVP P ++ I +KWIF+VK+ +DG+++R KARLVA+GF+Q+AGV++ +TFSPV+
Sbjct: 518 NNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTFSPVI 577
Query: 1346 KPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKA 1525
K TIR++F+LA+T W I Q+D +NAFLNG++ E VY+ QP G+ +HP HVC+L KA
Sbjct: 578 KASTIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQPAGFVSTSHPQHVCKLQKA 637
Query: 1526 LYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
LYGLKQAP+ W+ KL+ L + GF SS SD+SLF NG +L+LVYV+D+
Sbjct: 638 LYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDL 689
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 305 bits (782), Expect(2) = e-148
Identities = 151/267 (56%), Positives = 197/267 (73%)
Frame = +1
Query: 1696 NTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCK 1875
+TA I +LI QLN FSLKDLG VHYFLG+ T++G+HL QTKYIRDLL KT M CK
Sbjct: 1140 DTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCK 1199
Query: 1876 SAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLN 2055
A TP+ + KL +GD P ++ YRSTVGALQY+T+T P++SF VNK+ QF+Q PT
Sbjct: 1200 PARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEE 1259
Query: 2056 HWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLI 2235
HWK+ R+LRYL+G++ GL + S L L G+ DAD AS +DDRRSTSG+C+FLG NLI
Sbjct: 1260 HWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLI 1319
Query: 2236 AWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLA 2415
+W SKKQH+V+RSS E EYR+LA E+ W+ SL +EL L LA ++W DN+ + L+
Sbjct: 1320 SWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLS 1379
Query: 2416 SNPVYHARTKHIEIDVHFIRTRLRIRK 2496
+NPV HARTKHIE+D++F+R ++ IRK
Sbjct: 1380 ANPVLHARTKHIELDLYFVREKV-IRK 1405
Score = 250 bits (639), Expect(2) = e-148
Identities = 128/227 (56%), Positives = 159/227 (70%)
Frame = +2
Query: 1001 NTHPMHTMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEYHVLVRNHTWE 1180
NTHPM T +KSGI KPKIF A I EP++VS AL WK AM EY L RN+TW
Sbjct: 912 NTHPMITRAKSGIVKPKIFIAA----IREPSSVSAALQQDEWKKAMVAEYDALQRNNTWS 967
Query: 1181 LVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVVKPLTI 1360
LVP I KW++K K DG+V++ KARLVA+GF Q AG D+ ETFSPVVKP T+
Sbjct: 968 LVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTV 1027
Query: 1361 RLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKALYGLK 1540
R++F++A++R W I Q+DV+NAFLNGDL E V+M QPQG+ D+ +P VCRL KALYGLK
Sbjct: 1028 RVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLK 1087
Query: 1541 QAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
QAP+AW++KL L+S GF S+ SD SLF + VLVYV+DI
Sbjct: 1088 QAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDI 1134
Score = 172 bits (436), Expect(2) = 5e-61
Identities = 82/157 (52%), Positives = 103/157 (65%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGE++ + L GI R CP+T QNG+ ERKH+ +VE GL LL ASLP+KFW +
Sbjct: 651 GGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDES 710
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F TVV+L N+LPT ILH++ P + L PDY FLK F +CFP RPYN KL +RS +
Sbjct: 711 FRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEE 770
Query: 623 CVFLGYSDHHKGYICLPPSGKTIIARTVSFNEHEFPY 733
C FLGYS HKGY C+ +G+ I+ V FNE FPY
Sbjct: 771 CTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPY 807
Score = 93.6 bits (231), Expect(2) = 5e-61
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 MHQMHFSSIPHNTST-PFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKS 179
+H+ FS + H T T P E++H D+WGP S GY YY+ FVD F+RF+WIF L KS
Sbjct: 564 IHRFPFS-LSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKS 622
Query: 180 EVYSVFLHFNAMVERQYNHKIKIMQSDWGVSIKVF 284
E F++F VE Q++ KIK +Q+DWG + F
Sbjct: 623 EAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAF 657
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 286 bits (733), Expect(2) = e-142
Identities = 147/274 (53%), Positives = 186/274 (67%)
Frame = +1
Query: 1696 NTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCK 1875
++A + + I +LN +F+L+DLG V+YFLG+ +R+ HL Q KY +DLL +T M K
Sbjct: 915 SSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSK 974
Query: 1876 SAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLN 2055
A TP LS D PF + LYRSTVGALQYLT+T PDISF VNK QF+ PT
Sbjct: 975 PATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTT 1034
Query: 2056 HWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLI 2235
HW R+LRYLKG++ G+ Q + L + GY DAD ASC DDRRST GY IFLG NL+
Sbjct: 1035 HWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLV 1094
Query: 2236 AWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLA 2415
+WSS KQ VV+RSS ESEYRALA AT+E++WI + EL LS +S +LW DN A LA
Sbjct: 1095 SWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLA 1154
Query: 2416 SNPVYHARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
+NPV+HARTKHIE+D+HFIR + ++L P
Sbjct: 1155 ANPVFHARTKHIEMDLHFIRDHVLRKQLVIQYLP 1188
Score = 249 bits (637), Expect(2) = e-142
Identities = 119/235 (50%), Positives = 172/235 (73%)
Frame = +2
Query: 977 TSTSPHTINTHPMHTMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEYHV 1156
+++ PH N HPM T +K+GI K K++ SS ISEPTT ++A+ +W AM++E+
Sbjct: 678 STSEPHPTNQHPMVTRAKNGISKKKVY---FSSHISEPTTFTQAVKDSNWVLAMEKEFSA 734
Query: 1157 LVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFS 1336
L RN+TW LVP + I KW++K+K+K DG+V+R KARLVA+GF Q G++YFETFS
Sbjct: 735 LQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFS 794
Query: 1337 PVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRL 1516
PVVK TIR++ ++A++ W +HQ+DV NAFL+GDL E V+M QP G+ + +P+HVC+L
Sbjct: 795 PVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKL 854
Query: 1517 VKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
KALYGLKQAP+AWY+KL L+ GF++S +DSS+F H ++++L+YV+DI
Sbjct: 855 NKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDI 909
Score = 176 bits (445), Expect = 3e-41
Identities = 84/151 (55%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Frame = +2
Query: 284 STLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHAFSTVVFL 463
S+ L + GI + CPYT QNG ERK +H++ETGLALLA ASLP KFW +AF T +FL
Sbjct: 464 SSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTIFL 523
Query: 464 INKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAKCVFLGYS 643
IN+LPT +L+ QSP Q L G SP+Y K F C+PY RPYN +KL +RS++CVFLGYS
Sbjct: 524 INRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYS 583
Query: 644 DHHKGYICLPP-SGKTIIARTVSFNEHEFPY 733
+HKGY+CL P +G+ + R V F+E FP+
Sbjct: 584 SNHKGYMCLNPLTGRLYVTRHVVFHETVFPF 614
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 279 bits (713), Expect(2) = e-141
Identities = 143/274 (52%), Positives = 182/274 (66%)
Frame = +1
Query: 1696 NTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCK 1875
N + I L F+L+DLG + YFLG+ + +HL Q KYI DLL++T M + K
Sbjct: 1062 NPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSK 1121
Query: 1876 SAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLN 2055
APTP LS D +P YR TVGALQY+T+T PDI+F VNK QF+ P+
Sbjct: 1122 PAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDV 1181
Query: 2056 HWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLI 2235
HW R+LRYLKG++H GL FQP + + L+GY+DAD ASC DDRRSTSGYC+FLGSNLI
Sbjct: 1182 HWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLI 1241
Query: 2236 AWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLA 2415
+WSS KQ +V++SS ESEYR L T ELVWI SL EL L S +LW DN A LA
Sbjct: 1242 SWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLP-TSPPILWCDNQSAAHLA 1300
Query: 2416 SNPVYHARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
+NPV+H+R+KHIE+D+HFIR ++ ++L P
Sbjct: 1301 ANPVFHSRSKHIELDLHFIREKVLRQELQICYVP 1334
Score = 256 bits (653), Expect(2) = e-141
Identities = 125/237 (52%), Positives = 168/237 (70%)
Frame = +2
Query: 971 AATSTSPHTINTHPMHTMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEY 1150
AA S P +NTHPM T +KSGI K + F + +EP T S+A W AM+ EY
Sbjct: 823 AAPSPPPLPLNTHPMVTRAKSGIHKKRSF---IVQHTTEPRTYSQASKNDSWVQAMNSEY 879
Query: 1151 HVLVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFET 1330
L+RN+TW LVP H + +WI+K+K++ DGS++R KARLVA+GF Q G+DYF+T
Sbjct: 880 QALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDT 939
Query: 1331 FSPVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVC 1510
FSPVVKP TIRL+ +LAV+ W + Q+DV NAFLNGDL E V+M QPQG+ + +PT+VC
Sbjct: 940 FSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNPTYPTYVC 999
Query: 1511 RLVKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
+L KALYGLKQAP+AW+ KL+ L+ GF+SS +D+SLF H ++++LVYV+DI
Sbjct: 1000 KLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDI 1056
Score = 156 bits (395), Expect(2) = 2e-52
Identities = 79/158 (50%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGE+ L++ GI + CP+T QNG ERK +H+VETGLAL+A + LP K+W +A
Sbjct: 608 GGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYA 667
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F T V+LIN LP +LH QSP Q L P+Y L+ F CFP RPY KL +RS
Sbjct: 668 FQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTA 727
Query: 623 CVFLGYSDHHKGYICLPPSGKTI-IARTVSFNEHEFPY 733
CVFLGY+ HKGY+CL S I I+R V F+E FP+
Sbjct: 728 CVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPF 765
Score = 80.5 bits (197), Expect(2) = 2e-52
Identities = 38/93 (40%), Positives = 54/93 (58%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
H + +S + S P ++HTD+WGPA S SI G Y++ F+DD++R TWI+ L+ K +
Sbjct: 522 HSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQA 581
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDWGVSIKVF 284
F+ F MVE Q IK +QSD G F
Sbjct: 582 LQSFITFRKMVENQLQTTIKCIQSDNGGEFLAF 614
>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
Length = 773
Score = 278 bits (710), Expect(2) = e-141
Identities = 142/274 (51%), Positives = 181/274 (66%)
Frame = +1
Query: 1696 NTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCK 1875
N + I L F+L+DLG + YFLG+ + +HL Q KYI DLL++T M + K
Sbjct: 409 NPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSK 468
Query: 1876 SAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLN 2055
APTP LS D +P YR TVGALQY+T+T PDI+F VNK QF+ P+
Sbjct: 469 PAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDV 528
Query: 2056 HWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLI 2235
HW R+LRYLKG++H GL FQP + + +GY+DAD ASC DDRRSTSGYC+FLGSNLI
Sbjct: 529 HWMAVKRILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYCVFLGSNLI 588
Query: 2236 AWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLA 2415
+WSS KQ +V++SS ESEYR L T ELVWI SL EL L S +LW DN A LA
Sbjct: 589 SWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLP-TSPPILWCDNQSAAHLA 647
Query: 2416 SNPVYHARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
+NPV+H+R+KHIE+D+HFIR ++ ++L P
Sbjct: 648 ANPVFHSRSKHIELDLHFIREKVLRQELQICYVP 681
Score = 255 bits (651), Expect(2) = e-141
Identities = 124/237 (52%), Positives = 167/237 (70%)
Frame = +2
Query: 971 AATSTSPHTINTHPMHTMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEY 1150
AA S P +NTHPM T +KSGI K + F + +EP T S+A W AM+ EY
Sbjct: 170 AAPSPPPLPLNTHPMVTRAKSGIHKKRSF---IVQHTTEPRTYSQAFKNDSWVQAMNSEY 226
Query: 1151 HVLVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFET 1330
L+RN+TW LVP H + +WI+K+K++ DGS++R KARLVA+GF Q G+DYF+T
Sbjct: 227 QALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDT 286
Query: 1331 FSPVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVC 1510
FSPVVKP TIRL+ +LAV+ W + Q+DV N FLNGDL E V+M QPQG+ + +PT+VC
Sbjct: 287 FSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNGDLEEEVFMTQPQGFVNPTYPTYVC 346
Query: 1511 RLVKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
+L KALYGLKQAP+AW+ KL+ L+ GF+SS +D+SLF H ++++LVYV+DI
Sbjct: 347 KLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDI 403
Score = 113 bits (282), Expect = 5e-22
Identities = 56/112 (50%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = +2
Query: 401 LAHASLPIKFWWHAFSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYT 580
+A + LP K+W +AF T V+LIN LP +LH QSP Q L P+Y L+ F CFP
Sbjct: 1 MAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSL 60
Query: 581 RPYNNSKLMFRSAKCVFLGYSDHHKGYICLPPSGKTI-IARTVSFNEHEFPY 733
RPY KL +RS CVFLGY+ HKGY+CL S I I+R V F+E FP+
Sbjct: 61 RPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPF 112
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 283 bits (724), Expect(2) = e-137
Identities = 138/268 (51%), Positives = 187/268 (69%), Gaps = 1/268 (0%)
Frame = +1
Query: 1717 LIQQLNQTFSLKDLGAVHYFLGLGTIRTSHG-IHLVQTKYIRDLLHKTGMSSCKSAPTPI 1893
LI +L FSLKDLG + YFLG+ +T+ G +HL Q KYI+DLL KT M KS PTP+
Sbjct: 959 LISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPM 1018
Query: 1894 CSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKICN 2073
S KLS G P DN F YRS VGALQY+T+T P+I+F VNK+ QF+Q P HWK
Sbjct: 1019 LSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVK 1078
Query: 2074 RVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSKK 2253
R+LRYL G+ G+ +P + L G+ DAD S +DDRRSTSG+C+FLG +L++WSSKK
Sbjct: 1079 RILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKK 1138
Query: 2254 QHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVYH 2433
QH +RSSTE+EYR+LA T+E++W+ SL +EL + V+W DN+ ++L++NPV H
Sbjct: 1139 QHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLH 1198
Query: 2434 ARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
+RTKH+E+D++F+R ++ RKL P
Sbjct: 1199 SRTKHMELDLYFVREKVMERKLVVNHVP 1226
Score = 238 bits (606), Expect(2) = e-137
Identities = 123/238 (51%), Positives = 161/238 (67%), Gaps = 4/238 (1%)
Frame = +2
Query: 980 STSPHTINTHPMH--TMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEYH 1153
+T P T P H T SK+GIFKP +++ V ++ EP T EA+S P WK AMDEE+
Sbjct: 711 NTRPVTXPQQPHHMVTRSKNGIFKPXVYT--VDLNVEEPNTFQEAISHPKWKEAMDEEFR 768
Query: 1154 VLVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETF 1333
L++N TW LV + +W+FK+K DGSV R KARLVA+G+ Q G D++ETF
Sbjct: 769 ALMKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETF 828
Query: 1334 SPVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTH--V 1507
SPVVKP TIR++ ++AV++ W I Q+DV+NAFLNG+L E VYM QP G++ K + V
Sbjct: 829 SPVVKPTTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLV 888
Query: 1508 CRLVKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
C+L KALYGLKQAP+AW+DKLK L GF S+ SD SLF N + + VLVYV+DI
Sbjct: 889 CKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDI 946
Score = 181 bits (460), Expect(2) = 5e-54
Identities = 85/157 (54%), Positives = 107/157 (68%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGE++ L T + GI R CP+T QNGI+ERKH+H+VE GL LLA ASLP+K+W A
Sbjct: 446 GGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDA 505
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
FST VFLIN+LPT +L + P++ L P+Y LK F CFP+ RPYN KL FRS+
Sbjct: 506 FSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSP 565
Query: 623 CVFLGYSDHHKGYICLPPSGKTIIARTVSFNEHEFPY 733
C FLGYS HKGY CL G+ I+R+V F+E FP+
Sbjct: 566 CTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPF 602
Score = 60.8 bits (146), Expect(2) = 5e-54
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = +3
Query: 87 SSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEVYSVFLHFNAMVERQYNHKIKIMQSDWG 266
SSY G+ YYV F D ++R+TW++ L KS+ FL F A E Q+ K+K Q+DWG
Sbjct: 390 SSY---GFTYYVSFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWG 446
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 270 bits (690), Expect(3) = e-136
Identities = 134/258 (51%), Positives = 178/258 (68%), Gaps = 2/258 (0%)
Frame = +1
Query: 1717 LIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPIC 1896
L+Q L F+LKDLG +HYFLG+ + +GI L Q KY DLL K GM CK A TP+
Sbjct: 1155 LLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLS 1214
Query: 1897 SNTKLSLGDSAPF--DNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKIC 2070
+ KLSL + + ++ YRS VGALQYLT+T PDI+F VNK+ QFL APT HW
Sbjct: 1215 VSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAV 1274
Query: 2071 NRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSK 2250
R+LRYLK GL + G++DAD A C+DDRRST G+ IFLGSNL++W+++
Sbjct: 1275 KRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNAR 1334
Query: 2251 KQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVY 2430
KQ V+RSSTESEY+A+A AT E++W+ +L AEL + ++ +W DN+GA L++NPV+
Sbjct: 1335 KQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPVF 1394
Query: 2431 HARTKHIEIDVHFIRTRL 2484
HARTKHIE+D HF+R R+
Sbjct: 1395 HARTKHIEVDYHFVRERV 1412
Score = 236 bits (601), Expect(3) = e-136
Identities = 118/228 (51%), Positives = 158/228 (69%), Gaps = 7/228 (3%)
Frame = +2
Query: 1019 TMSKSGIFKPKIFSLAVS-------SSISEPTTVSEALSLPHWKSAMDEEYHVLVRNHTW 1177
T +SG+ K K+++ ++ EPT EAL +WK AMD EY LV+N TW
Sbjct: 915 TRLQSGVRKEKVYTDGTIKYKHSWFTASGEPTNDLEALKDKNWKLAMDSEYDALVKNKTW 974
Query: 1178 ELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVVKPLT 1357
LVP + I KW++K+K KADG+++R KARLVA+GF+Q G+DY +TFSPVVK T
Sbjct: 975 HLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 1034
Query: 1358 IRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKALYGL 1537
IR++ SLAV++GW + Q+DV NAFL+G L E VYM+QP G+ED P HVC+L KALYGL
Sbjct: 1035 IRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGL 1094
Query: 1538 KQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
KQAP+AW+ +L L+ LGFK S D+SLF+L++ + VLVYV+DI
Sbjct: 1095 KQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDI 1142
Score = 33.9 bits (76), Expect(3) = e-136
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 2466 FHPDKVKNKEVDVRHVPSEDQVADLLTKPLSVARFLSLCQKLGLTSPQFGLQQGI 2630
F ++V K +++ V + DQVAD TKPLSV + L L + GL++G+
Sbjct: 1407 FVRERVSQKLLEIDFVSTNDQVADGFTKPLSVRLLENFKSNLNLV--RSGLREGV 1459
Score = 176 bits (446), Expect(2) = 9e-61
Identities = 82/158 (51%), Positives = 110/158 (69%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGEY+ L++ +GI CP+TH QNG ERKH+H+VE GL+LL+HAS+P+KFW A
Sbjct: 579 GGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEA 638
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F +LIN++P+ ++HN SP +KL PDY L+ F AC+P RPYNN KL FRS +
Sbjct: 639 FQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKR 698
Query: 623 CVFLGYSDHHKGYICLPPS-GKTIIARTVSFNEHEFPY 733
CVFLG+S HKG+ CL S G+ I+R V F+E+ FP+
Sbjct: 699 CVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPF 736
Score = 89.0 bits (219), Expect(2) = 9e-61
Identities = 41/87 (47%), Positives = 56/87 (64%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
HQ+ F + P E+V +DVWGPA S+ YYV F+DDF++FTWI+ + KS+V
Sbjct: 494 HQLPFPISSSVSKHPLELVFSDVWGPAPE-SVGRKKYYVSFIDDFSKFTWIYLIQHKSQV 552
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDWG 266
+ F F MVERQ++ KI MQ+DWG
Sbjct: 553 FDKFQEFQVMVERQFDRKILAMQTDWG 579
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 273 bits (698), Expect(2) = e-136
Identities = 131/269 (48%), Positives = 184/269 (68%), Gaps = 2/269 (0%)
Frame = +1
Query: 1717 LIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPIC 1896
L++ LN+ F+LKDLG +HYFLG+ + S+G+ L Q KY DLL + MS+CK TP+
Sbjct: 1147 LLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLS 1206
Query: 1897 SNTKLSLGDSAPF--DNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKIC 2070
+ KL+L + +P ++ YRS VGALQYLT+T PDI++ VNK+ QFL APT +HW
Sbjct: 1207 VSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAV 1266
Query: 2071 NRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSK 2250
R+LRYL GL + + GY+DAD A IDDR+ST G+ +FLGSNL++WS++
Sbjct: 1267 KRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSAR 1326
Query: 2251 KQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVY 2430
KQ V+RSSTE+EY+A+A T EL+W+ +L ELG+ ++ +W DN+GA L++NPV+
Sbjct: 1327 KQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVF 1386
Query: 2431 HARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
HARTKHIE+D HF+R R+ + L P
Sbjct: 1387 HARTKHIEVDYHFVRERVSQKLLEIDFVP 1415
Score = 243 bits (619), Expect(2) = e-136
Identities = 118/227 (51%), Positives = 162/227 (71%), Gaps = 5/227 (2%)
Frame = +2
Query: 1016 HTMSKSGIFKPKIFS-----LAVSSSISEPTTVSEALSLPHWKSAMDEEYHVLVRNHTWE 1180
HT +SGI K K+++ SS EP EAL +W+ AM+ EY+ L++N TW
Sbjct: 908 HTRLRSGIRKEKVYTDGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKNDTWH 967
Query: 1181 LVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVVKPLTI 1360
LVP + I KW++K+K KADG+++R KARLVA+GF+Q G+DY +TFSPVVK TI
Sbjct: 968 LVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI 1027
Query: 1361 RLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKALYGLK 1540
R++ S+AV+RGW + Q+DV NAFL+G L E VYM QP G+E + P +VC+L KALYGLK
Sbjct: 1028 RIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLK 1087
Query: 1541 QAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
QAP+AWY +L L+ LGF++S +D+SLF+L++ G L+ VLVYV+DI
Sbjct: 1088 QAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDI 1134
Score = 154 bits (389), Expect(2) = 6e-53
Identities = 73/158 (46%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GG Y+ L++ +G+ QNG ERKH+H+VE GL+LL++AS+P+KFW A
Sbjct: 585 GGRYQKLNSFFAQIGLIIMCHVLTLIRQNGSAERKHRHIVEVGLSLLSYASMPLKFWDEA 644
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F +LIN++P+ + N +P +KL PDY L+ F AC+P+ RPYN KL FRS +
Sbjct: 645 FVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQ 704
Query: 623 CVFLGYSDHHKGYICLP-PSGKTIIARTVSFNEHEFPY 733
CVFLG+S HHKG+ CL SG+ I+R V F+E+ FP+
Sbjct: 705 CVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENVFPF 742
Score = 84.7 bits (208), Expect(2) = 6e-53
Identities = 40/86 (46%), Positives = 55/86 (63%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
HQ+ + + P E+V +DVWGPA S+ YYV F+DDF++FTWI+ L KSEV
Sbjct: 499 HQLPYIRSTSVSQFPLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEV 557
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDW 263
+ F F A+VER ++ KI MQ+DW
Sbjct: 558 FEKFKEFQALVERMFDRKIIAMQTDW 583
>ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
Length = 2690
Score = 256 bits (653), Expect(3) = e-135
Identities = 127/256 (49%), Positives = 172/256 (67%)
Frame = +1
Query: 1720 IQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPICS 1899
I L Q FS+KDLG + YFLG+ RTS G+HL+Q KYI+DLL KT M + K+ TP+ +
Sbjct: 1812 IAMLAQRFSIKDLGHISYFLGIEATRTSKGLHLMQNKYIQDLLAKTNMLNAKTVSTPLAT 1871
Query: 1900 NTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKICNRV 2079
+ KL+L P NP YR VG+LQYL T PDI++ VNKLSQF+ PT +HW+ RV
Sbjct: 1872 HPKLTLRSGTPLLNPTDYRQVVGSLQYLAFTRPDIAYAVNKLSQFMHQPTEDHWQAAKRV 1931
Query: 2080 LRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSKKQH 2259
LRYL G+ G++ + S L Y+DAD A DD ST+ Y I++G+ I+WS+KKQ
Sbjct: 1932 LRYLAGTSKQGIWIRRDSPPTLHAYSDADWAGDPDDYISTNAYIIYIGTTPISWSAKKQS 1991
Query: 2260 VVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVYHAR 2439
VARSSTE+EYR++A EL+W+ SL EL + + SS V++ DN+GA L +NPV+H R
Sbjct: 1992 GVARSSTEAEYRSVANTAAELMWVCSLMKELHIPVTSSPVIYCDNIGATYLCANPVFHTR 2051
Query: 2440 TKHIEIDVHFIRTRLR 2487
KH+ +D HFIR ++
Sbjct: 2052 MKHVALDYHFIRAHVQ 2067
Score = 237 bits (604), Expect(3) = e-135
Identities = 118/232 (50%), Positives = 160/232 (68%), Gaps = 1/232 (0%)
Frame = +2
Query: 989 PHTINTHPMHTMSKSGIFKPKI-FSLAVSSSISEPTTVSEALSLPHWKSAMDEEYHVLVR 1165
P N H M T SK+ I KPK FSL + + PTTV++AL W+++M E+ + R
Sbjct: 1567 PAPPNQHSMKTRSKNNIIKPKSKFSLNIQTRPIIPTTVNQALRDRKWRNSMSLEFDAITR 1626
Query: 1166 NHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVV 1345
NHT++LVP +P + I KWIF +K+ +G ++R K+R+VARGF Q G+DY ETFSPV+
Sbjct: 1627 NHTYDLVPPAPYQNVIDTKWIFTLKYLPNGEIDRHKSRIVARGFNQRYGIDYAETFSPVI 1686
Query: 1346 KPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKA 1525
K T+RL+ AV + W I Q+DV+NAFL G L + VY+ QP G+ DK P HVCRL KA
Sbjct: 1687 KSTTVRLVLEHAVRKDWTIRQIDVNNAFLQGTLQDEVYVSQPPGFVDKDRPHHVCRLRKA 1746
Query: 1526 LYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
LYGLKQAP+AWY++LK L++ GF++SV+D+SLF LV +LVYV+DI
Sbjct: 1747 LYGLKQAPRAWYEELKRTLLAAGFRNSVADTSLFTYCHGPHLVYILVYVDDI 1798
Score = 43.5 bits (101), Expect(3) = e-135
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 2481 VKNKEVDVRHVPSEDQVADLLTKPLSVARFLSLCQKLGLTSP 2606
V++ + V HV ++DQ+AD LTKPLS RF LC K+G P
Sbjct: 2066 VQSGALRVSHVSTKDQLADALTKPLSRLRFQELCSKIGEKRP 2107
Score = 148 bits (374), Expect = 2e-32
Identities = 75/158 (47%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGEY GL + L + GI P+T NGI ERKH+H+VETGL LL +++P +W A
Sbjct: 1278 GGEYIGLRSFLATHGISHLTSPPHTPEHNGISERKHRHIVETGLTLLGKSAVPRCYWPFA 1337
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F+ V+LIN++P+P+ N SP+ KL G P+YQ L+ F CFP+ RPY +KL RS
Sbjct: 1338 FAAAVYLINRMPSPVTQNVSPYAKLFGQQPNYQKLRVFGSLCFPWLRPYAQNKLDVRSIP 1397
Query: 623 CVFLGYSDHHKGYICLPPSGKTII-ARTVSFNEHEFPY 733
CVFLGYS YICL P + + +R V F E FP+
Sbjct: 1398 CVFLGYSLTQSSYICLDPKTQRLYSSRHVQFLEDTFPF 1435
Score = 73.6 bits (179), Expect = 2e-09
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
H++ F + + P + +++DVW + S D Y YY+ FVD FTR+TW++PL +KS+V
Sbjct: 1193 HKLPFHTNTIKSDKPLQYLYSDVW-TSPIVSSDHYKYYLIFVDHFTRYTWLYPLKQKSQV 1251
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDWG---VSIKVFLLFSNLWVYISDILAHIHTPK 347
F+ F A+VE ++ +I + SD G + ++ FL IS + + HTP+
Sbjct: 1252 RETFIAFKALVENRFKTRIVTLYSDNGGEYIGLRSFLATHG----ISHLTSPPHTPE 1304
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 270 bits (691), Expect(2) = e-135
Identities = 130/269 (48%), Positives = 183/269 (68%), Gaps = 2/269 (0%)
Frame = +1
Query: 1717 LIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPIC 1896
L++ LN+ F+LKDLG +HYFLG+ + +GI L Q KY DLL + MS+CK TP+
Sbjct: 1138 LLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLS 1197
Query: 1897 SNTKLSLGDSAPF--DNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKIC 2070
+ KL+L + +P ++ YRS VGALQYLT+T PDI++ VNK+ QFL APT +HW
Sbjct: 1198 VSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAV 1257
Query: 2071 NRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSK 2250
R+LRYL GL + + GY+DAD A +DDR+ST G+ +FLGSNL++WS++
Sbjct: 1258 KRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSAR 1317
Query: 2251 KQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVY 2430
KQ V+RSSTE+EY+A+A T EL+W+ +L ELG+ ++ +W DN+GA L++NPV+
Sbjct: 1318 KQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVF 1377
Query: 2431 HARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
HARTKHIE+D HF+R R+ + L P
Sbjct: 1378 HARTKHIEVDYHFVRERVSQKLLEIDFVP 1406
Score = 243 bits (620), Expect(2) = e-135
Identities = 122/243 (50%), Positives = 168/243 (69%), Gaps = 6/243 (2%)
Frame = +2
Query: 971 AATSTSPHTINTHPM-HTMSKSGIFKPKIFS-----LAVSSSISEPTTVSEALSLPHWKS 1132
A T+T T P HT +SGI K K+++ +S EP EAL +WK+
Sbjct: 883 ATTATGDATAAPAPRPHTRLRSGIRKEKVYTDGTVKYGCFTSTGEPQNDKEALGDKNWKA 942
Query: 1133 AMDEEYHVLVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAG 1312
AM+ EY L++N TW LVP + I KW++K+K KADG+++R KARLVA+GF+Q G
Sbjct: 943 AMEAEYDALIKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYG 1002
Query: 1313 VDYFETFSPVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKA 1492
+DY +TFSPVVK TIR++ S+AV+RGW + Q+DV NAFL+G L E VYM QP G+E +
Sbjct: 1003 IDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFS 1062
Query: 1493 HPTHVCRLVKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYV 1672
P +VC+L KALYGLKQAP+AWY +L L+ LGF++S +D+SLF+L++ G ++ VLVYV
Sbjct: 1063 KPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYV 1122
Query: 1673 NDI 1681
+DI
Sbjct: 1123 DDI 1125
Score = 172 bits (436), Expect(2) = 2e-58
Identities = 78/158 (49%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGEY+ L++ +GI CP+TH QNG ERKH+H++E GL+LL++AS+P+KFW A
Sbjct: 585 GGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEA 644
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F +LIN++P+ + N +P +KL PDY L+ F AC+P+ RPYN KL FRS +
Sbjct: 645 FVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQ 704
Query: 623 CVFLGYSDHHKGYICLP-PSGKTIIARTVSFNEHEFPY 733
CVFLG+S HHKG+ CL SG+ I+R V F+E+ FP+
Sbjct: 705 CVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPF 742
Score = 85.1 bits (209), Expect(2) = 2e-58
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +3
Query: 48 PFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEVYSVFLHFNAMVERQ 227
P E+V +DVWGPA S+ YYV F+DDF++FTWI+ L KSEV+ F F A+VER
Sbjct: 514 PLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERM 572
Query: 228 YNHKIKIMQSDWG 266
++ KI MQ+DWG
Sbjct: 573 FDRKIIAMQTDWG 585
>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1403
Score = 261 bits (666), Expect(2) = e-135
Identities = 130/234 (55%), Positives = 168/234 (71%)
Frame = +2
Query: 980 STSPHTINTHPMHTMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEYHVL 1159
S + T N HPM T +K G+FKPK F + SEP +V++AL HWK AM +EY+ L
Sbjct: 853 SPATRTTNQHPMITRAKIGVFKPKAFL-----ATSEPISVAQALDNKHWKQAMQDEYNAL 907
Query: 1160 VRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSP 1339
++NHTW+LV P I+ KWIFK K+K DGS+ R KARLVARGF Q G+DY +TFSP
Sbjct: 908 LKNHTWDLVSLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSP 967
Query: 1340 VVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLV 1519
VVKP++IR++ +LAV++GW IHQ+DV NAFLNGDL E +YM+QPQG+ + A P VC+L
Sbjct: 968 VVKPVSIRIVLALAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHNGA-PNTVCKLR 1026
Query: 1520 KALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
KALYGLKQAP+AW+ KL L+ LGFK + SDSSLF + +L+YV+DI
Sbjct: 1027 KALYGLKQAPRAWFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYVDDI 1080
Score = 253 bits (645), Expect(2) = e-135
Identities = 131/296 (44%), Positives = 193/296 (65%), Gaps = 4/296 (1%)
Frame = +1
Query: 1693 DNTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRT-SHGIHLVQTKYIRDLLHKTGMSS 1869
++ A I TLI L++ F LKDLG++HYFLG+ + GIHL QTKY++D+L K MS+
Sbjct: 1085 NSPAAIQTLISTLHRFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDILDKLNMSN 1144
Query: 1870 CKSAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPT 2049
K TP+ + KL+ +A +P LYRS +GALQYLT+T PDI++ VNKL QF+ P
Sbjct: 1145 AKPVKTPMAPSLKLTNDGTAVCPDPSLYRSVIGALQYLTITRPDIAYTVNKLCQFMHHPL 1204
Query: 2050 LNHWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSN 2229
+HWK R+LRYL+G++ GL ++ + + Y D+D AS +D RSTSG C++LG N
Sbjct: 1205 ESHWKAVKRLLRYLQGTLQHGLHYKKSTDTGIHAYCDSDWASDHEDMRSTSGNCVYLGPN 1264
Query: 2230 LIAWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALT 2409
+++W +KKQ VV+RSSTE+E+R+LA TE+ +I +L +EL S ++W DN GA+
Sbjct: 1265 IVSWMAKKQRVVSRSSTEAEFRSLASLVTEVQYIQNLLSELHNSSTQPPLIWCDNQGAVL 1324
Query: 2410 LASNPVYHARTKHIEIDVHFIRTRLRIRKLTFAMYPLKIK---WLISLPSLSLLHA 2568
L++NPV H +TKH E+D+ F+R R+ ++ P + + L PS S+ A
Sbjct: 1325 LSANPVLHTKTKHFELDLWFVRERVARGQIQVKHIPARFQVADLLTKAPSSSIFLA 1380
Score = 167 bits (422), Expect(2) = 3e-58
Identities = 78/156 (50%), Positives = 105/156 (67%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
G E+ L+ L GI R CP++H QNG ERKH+H+ E GL LL+ + LP FW A
Sbjct: 610 GKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSSSGLPHIFWSDA 669
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
FST + +IN+LPTPIL ++SP++ L PDY L+ F AC+P+ RP+N+ K+ FRS++
Sbjct: 670 FSTAIHVINRLPTPILGHKSPYEVLFNKIPDYLLLRPFGCACYPHLRPFNSHKMDFRSSQ 729
Query: 623 CVFLGYSDHHKGYICLPPSGKTIIARTVSFNEHEFP 730
CVF+GYS HKGY C +GK II+R V F+E FP
Sbjct: 730 CVFIGYSMQHKGYKCFTTNGKIIISRNVVFDEDTFP 765
Score = 89.7 bits (221), Expect(2) = 3e-58
Identities = 40/87 (45%), Positives = 58/87 (66%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
H + FS ++P E+V++DVWGP+ S +G+ YYV F D F+++TWI+ + KSE
Sbjct: 524 HTLPFSDSYTVYNSPLELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSET 583
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDWG 266
F+HF +MVE Q+ HKIK+ QSD G
Sbjct: 584 AHHFIHFKSMVENQFGHKIKMFQSDGG 610
>emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]
Length = 1539
Score = 263 bits (672), Expect(2) = e-135
Identities = 136/262 (51%), Positives = 172/262 (65%)
Frame = +1
Query: 1696 NTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCK 1875
N + I L+ F+L+DLG + YFLG+ + +HL Q KYI DLLH+T M + K
Sbjct: 1237 NPKLVSHFISYLHDKFALRDLGPLSYFLGIQAQQQGSVLHLNQQKYIVDLLHRTQMEASK 1296
Query: 1876 SAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLN 2055
PTP LS D P +P YR VGALQY+T+T DI+F VNK QF+ P+
Sbjct: 1297 PTPTPGSLGRTLSQSDGVPLPDPSEYRRIVGALQYVTLTRLDIAFAVNKACQFMAKPSDV 1356
Query: 2056 HWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLI 2235
HW R+LRYLKG++ GL FQP + + L+GY+D D ASC DDRRSTSGY +FLGSNLI
Sbjct: 1357 HWLAIKRILRYLKGTISLGLHFQPSTSMELQGYSDVDWASCPDDRRSTSGYYVFLGSNLI 1416
Query: 2236 AWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLA 2415
+WSS KQ +V++S+ ESEYR L T ELVWI SL EL L S VLW DN A L
Sbjct: 1417 SWSSSKQRLVSKSNAESEYRGLVSLTAELVWIQSLLQELCLP-TSPPVLWCDNQSAAHLV 1475
Query: 2416 SNPVYHARTKHIEIDVHFIRTR 2481
+NPV+H+R+KHIE+D+HFIR +
Sbjct: 1476 ANPVFHSRSKHIELDLHFIREK 1497
Score = 249 bits (637), Expect(2) = e-135
Identities = 124/234 (52%), Positives = 162/234 (69%)
Frame = +2
Query: 980 STSPHTINTHPMHTMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEYHVL 1159
S+S +NTHPM T KSGI K K F + +S EP T ++A W AM EY L
Sbjct: 1001 SSSSSPLNTHPMVTRVKSGIHKKKSFLMQTTS---EPHTYNQASKSEPWDQAMQHEYQAL 1057
Query: 1160 VRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSP 1339
+RNHTW LVP P H + +WI+K+K+ +GSVER KARLVA+GF + GVDYF+TFSP
Sbjct: 1058 LRNHTWSLVPPPPSAHIVGCRWIYKLKYLPNGSVERHKARLVAQGFTKTPGVDYFDTFSP 1117
Query: 1340 VVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLV 1519
+VKP TIRL+ +LAV+ W I Q+DV N FLNGDL E V+M QPQG+ +P +VC+L
Sbjct: 1118 IVKPCTIRLILTLAVSFQWPIRQLDVENXFLNGDLQEEVFMAQPQGFVHPQYPHYVCKLY 1177
Query: 1520 KALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
KALYGLKQAP+ W+ KL+ L+ GF+SS +D+SLF H ++++LVYV+DI
Sbjct: 1178 KALYGLKQAPRVWFQKLRVALVDYGFQSSRADTSLFIHHTASNILILLVYVDDI 1231
Score = 151 bits (381), Expect(2) = 1e-42
Identities = 79/158 (50%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGE+ L++ GI + CP+T QNG ERK H+VETG+ALLA + LP K+W A
Sbjct: 776 GGEFIAFKPYLEAHGIVHQFLCPHTAQQNGRAERKICHLVETGMALLAQSFLPSKYWSFA 835
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F T V+LIN LP +L+ QSP Q L P+Y L+ F CFP RPYN+ KL +RS
Sbjct: 836 FQTSVYLINLLPAKLLNFQSPLQVLFHKIPNYHHLRVFACLCFPSLRPYNHHKLSYRSTA 895
Query: 623 CVFLGYSDHHKGYICLPPS-GKTIIARTVSFNEHEFPY 733
CVFLGY+ HKGYICL S + I+R V F+E FP+
Sbjct: 896 CVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPF 933
Score = 53.1 bits (126), Expect(2) = 1e-42
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +3
Query: 114 YYVQFVDDFTRFTWIFPLAEKSEVYSVFLHFNAMVERQYNHKIKIMQSDWG 266
Y++ F+DD++R+TWI+ L+ K + S F+ M+E Q N IK +QSD G
Sbjct: 726 YFLIFIDDYSRYTWIYFLSTKDQALSTFITIRKMIENQLNSTIKCIQSDNG 776
>ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
Length = 1312
Score = 268 bits (685), Expect(2) = e-135
Identities = 149/294 (50%), Positives = 195/294 (66%), Gaps = 1/294 (0%)
Frame = +1
Query: 1696 NTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCK 1875
NTA IQ+L+ F +KDLG +HYFLGL R++ G+ L Q+KYI DLLHKT M+ K
Sbjct: 995 NTAACQRFIQKLSTVFPVKDLGPLHYFLGLEVQRSADGLFLHQSKYISDLLHKTRMAGAK 1054
Query: 1876 SAPTPICSNTKLSLGDSAPF-DNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTL 2052
TP+ S+ L + P +P YRS VGALQYLT T PD+SF VN++ QF+ AP
Sbjct: 1055 PCLTPLGSH---KLDHTGPLLHDPTEYRSIVGALQYLTWTRPDLSFAVNQVCQFMHAPRE 1111
Query: 2053 NHWKICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNL 2232
H + R+LR+LK ++ GL+F+ + L Y+DAD A C DRRSTSGYCIFLGSNL
Sbjct: 1112 PHLQAAKRILRFLKATVSHGLWFKK-GTVHLTAYSDADWAGCPFDRRSTSGYCIFLGSNL 1170
Query: 2233 IAWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTL 2412
I+WS+KKQ VARSSTE+EYR+LA E+ WI +F +LGL L LW DN+ A++L
Sbjct: 1171 ISWSAKKQPTVARSSTEAEYRSLAHTAAEITWICKVFKDLGLHLPQVPSLWCDNLSAISL 1230
Query: 2413 ASNPVYHARTKHIEIDVHFIRTRLRIRKLTFAMYPLKIKWLISLPSLSLLHAFS 2574
ASNPV+HARTKHIE+D H+IR L + L LK++++ S L+ +H S
Sbjct: 1231 ASNPVFHARTKHIELDYHYIR-ELVLANL------LKVQYVCSHVQLADIHTKS 1277
Score = 243 bits (621), Expect(2) = e-135
Identities = 125/232 (53%), Positives = 161/232 (69%), Gaps = 5/232 (2%)
Frame = +2
Query: 1001 NTHPMHTMSKSGIFKPKIFSLAVSSSISE-----PTTVSEALSLPHWKSAMDEEYHVLVR 1165
NTHPM T SK+GI KPK +S A + + PTT +A HW+SAM +E + L
Sbjct: 760 NTHPMITRSKAGISKPKAYS-ATKHPLPDTVXIIPTTYLQASKHIHWRSAMQDEINALQS 818
Query: 1166 NHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVV 1345
TW L P + + + KW+F+VK DG+++R KARLVA+GF Q AG+DY ETFSPV
Sbjct: 819 TGTWSLXPFTSQQNIVGCKWVFRVKKHPDGTIDRYKARLVAKGFHQQAGLDYXETFSPVA 878
Query: 1346 KPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKA 1525
KP TIR++ SLAV W ++Q+D+SNAFL+GDL E VYM QP G+ D +P HVC+L K+
Sbjct: 879 KPXTIRILLSLAVQHDWFLNQLDISNAFLHGDLQEDVYMQQPPGFSDPTYPHHVCKLRKS 938
Query: 1526 LYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
LYGLKQAP+AW++KL L SLGF S SD+SLF L Q+G V+VLVYV+DI
Sbjct: 939 LYGLKQAPRAWFEKLFAVLKSLGFHQSQSDASLFVL-QDGVPVIVLVYVDDI 989
Score = 89.0 bits (219), Expect = 3e-14
Identities = 37/88 (42%), Positives = 59/88 (67%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
H++ F S ++ E++H DVWGP+ S+ GY YY+ VDD+++++W FPL KS V
Sbjct: 560 HKLPFGSPQSVSTASLELLHCDVWGPSPVVSVSGYRYYLLIVDDYSKYSWYFPLKSKSSV 619
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDWGV 269
+S+F+ F + VE +KIK+++SD GV
Sbjct: 620 FSIFVDFKSYVENAIGNKIKVVRSDSGV 647
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 246 bits (627), Expect(3) = e-134
Identities = 126/257 (49%), Positives = 172/257 (66%)
Frame = +1
Query: 1714 TLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPI 1893
++I QL F +KDLG ++YFLG+ ++ G+ L Q KY DLL KT M K TP+
Sbjct: 1357 SIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDMLGAKPCATPV 1416
Query: 1894 CSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKICN 2073
S +KL + D P YRSTVGALQYLT T PD++F VN++ Q++ +P H +
Sbjct: 1417 -STSKLDHSGTLLSD-PTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMHSPQTIHLQAVK 1474
Query: 2074 RVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSKK 2253
R+LRYLKG++ GL+F S+ CL ++DAD A C DRRSTSGYC+FLGSNLI+WS+KK
Sbjct: 1475 RILRYLKGTVDLGLWFTKGSQ-CLTAWSDADWAGCPVDRRSTSGYCVFLGSNLISWSAKK 1533
Query: 2254 QHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVYH 2433
Q VARSSTE+EYR+LA E+ W+ + ++ L + V++ DN + LA NPV+H
Sbjct: 1534 QATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPVFH 1593
Query: 2434 ARTKHIEIDVHFIRTRL 2484
ARTKH+EID H+IR ++
Sbjct: 1594 ARTKHVEIDYHYIREKV 1610
Score = 242 bits (618), Expect(3) = e-134
Identities = 122/241 (50%), Positives = 164/241 (68%), Gaps = 10/241 (4%)
Frame = +2
Query: 989 PHTINTHPMHTMSKSGIFKPKIFSLA---VSSSISE-------PTTVSEALSLPHWKSAM 1138
P +NTH M T +K+GI KPK+F+ + S++ P+T +A HW AM
Sbjct: 1106 PIPVNTHTMITRAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAM 1165
Query: 1139 DEEYHVLVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVD 1318
E+ L TWELVP+ + + KW+FKVKHK DG++ER KARLVA+GF Q G+D
Sbjct: 1166 QFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLD 1225
Query: 1319 YFETFSPVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHP 1498
+ ETFSPV KP TIR++ S+AV+ W IHQ+DVSNAFL+G L E VYMVQP G+ D + P
Sbjct: 1226 FSETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKP 1285
Query: 1499 THVCRLVKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVND 1678
HVC+L K+LYGLKQAP+AWY+ ++SLGF SS SD+SLF + ++ ++ +LVYV+D
Sbjct: 1286 HHVCKLRKSLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLF-IKRDTSITFILVYVDD 1344
Query: 1679 I 1681
I
Sbjct: 1345 I 1345
Score = 44.7 bits (104), Expect(3) = e-134
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 2475 DKVKNKEVDVRHVPSEDQVADLLTKPLSVARFLSLCQKLGLTSPQFGLQ 2621
+KV + V+HV S Q+AD+ TKPL+ RF +L KL + SP F L+
Sbjct: 1608 EKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALTSKLSVRSPSFSLR 1656
Score = 142 bits (358), Expect(2) = 2e-47
Identities = 77/160 (48%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Frame = +2
Query: 263 GGEY--KGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWW 436
GGE+ K L + GI + C +T QNG ERKH+HVVE G LL+ + LP +FW
Sbjct: 860 GGEFLNKSLQSFFNEQGITHQLSCLHTSEQNGCAERKHRHVVEMGRTLLSQSDLPTQFWV 919
Query: 437 HAFSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRS 616
AF TVV+LIN+LP P SP + L SP Y LK F AC+P+ +PY+ KL F+S
Sbjct: 920 EAFQTVVYLINRLP-PQSSVISPWELLFHASPKYHTLKAFGCACYPWLQPYSRDKLDFKS 978
Query: 617 AKCVFLGYSDHHKGYICLPP-SGKTIIARTVSFNEHEFPY 733
+CVFLGYS +H GY C P S + I+R V F+E FPY
Sbjct: 979 KQCVFLGYSLNHSGYRCWDPISNRLYISRHVVFDESLFPY 1018
Score = 78.6 bits (192), Expect(2) = 2e-47
Identities = 32/87 (36%), Positives = 60/87 (68%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
+++ FS++P +S P +++HTDVWGP+ + S GY +Y+ VDDFT+++W++PL KS+V
Sbjct: 774 YRLSFSTLPCTSSRPLQLLHTDVWGPSPTSSCTGYRFYLIIVDDFTKYSWLYPLHFKSDV 833
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDWG 266
+S F ++ + +++ ++SD G
Sbjct: 834 FSTLKTFILKLQTLLDLQVQSIRSDSG 860
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 273 bits (697), Expect(2) = e-134
Identities = 138/272 (50%), Positives = 182/272 (66%), Gaps = 2/272 (0%)
Frame = +1
Query: 1708 IVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPT 1887
+ L++ L + F+LKDLG +HYFLG+ + S GI L Q KY+ DLL + GM+ CK T
Sbjct: 955 VPALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVST 1014
Query: 1888 PICSNTKLSL--GDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHW 2061
P+ ++ KL+L GD ++ YRS VGALQYLT+T PDI F VNK+ QFL APT+ HW
Sbjct: 1015 PLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHW 1074
Query: 2062 KICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAW 2241
R+LRYLK GL + + GY+DAD A IDDRRST G+ +FLG NL++W
Sbjct: 1075 AAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSW 1134
Query: 2242 SSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASN 2421
++KKQ V RSSTESEY+ALA AT E++WI +L EL + + LW DN+GA L+SN
Sbjct: 1135 NAKKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLSSN 1194
Query: 2422 PVYHARTKHIEIDVHFIRTRLRIRKLTFAMYP 2517
PV+HARTKHIE+D HF+R R++ + L P
Sbjct: 1195 PVFHARTKHIEVDYHFVRERMQRKLLEVEFIP 1226
Score = 237 bits (605), Expect(2) = e-134
Identities = 121/242 (50%), Positives = 165/242 (68%), Gaps = 5/242 (2%)
Frame = +2
Query: 971 AATSTSPHTINTHPMHTMSKSGIFKPKIFS-----LAVSSSISEPTTVSEALSLPHWKSA 1135
A S++P + P+ + K GI K KI++ ++ EP + +AL +WK A
Sbjct: 705 ALRSSTPEGEASRPVTHLQK-GIRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHA 763
Query: 1136 MDEEYHVLVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGV 1315
MD ++ L+ N TW LVP + I KW++K+K K DGS++R KARLVA+GF+Q G+
Sbjct: 764 MDAKFTALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGI 823
Query: 1316 DYFETFSPVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAH 1495
DY +TFSPVVK TIR++ S+AV+RGW + Q+DV NAFL+G L E VYM QP GYEDK H
Sbjct: 824 DYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVH 883
Query: 1496 PTHVCRLVKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVN 1675
P +VC+L KALYGLKQAP+AWY KL L LGF+ S +D+SLF+ ++ G ++ VLVYV+
Sbjct: 884 PDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVD 943
Query: 1676 DI 1681
DI
Sbjct: 944 DI 945
Score = 174 bits (440), Expect = 1e-40
Identities = 84/158 (53%), Positives = 110/158 (69%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGEY+ L+T +GI CP+TH QNG ERKH+H+VE GL+LLAHASLP+KFW A
Sbjct: 414 GGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLKFWDEA 473
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
+ + V+LIN++PT +L SP + L +PDYQ L+TF AC+P RPYN+ K+ FRS +
Sbjct: 474 YQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKMHFRSKR 533
Query: 623 CVFLGYSDHHKGYICLPPS-GKTIIARTVSFNEHEFPY 733
C FLGYS HKG+ CL S G+ I+R V F+E FP+
Sbjct: 534 CTFLGYSPLHKGFRCLDSSTGRIYISRDVVFDESVFPF 571
Score = 75.1 bits (183), Expect = 5e-10
Identities = 38/77 (49%), Positives = 46/77 (59%)
Frame = +3
Query: 69 DVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEVYSVFLHFNAMVERQYNHKIKI 248
DVWGPA G YYV F+D F+RFTWI+ L KSEV+ F F +VER +N KI
Sbjct: 350 DVWGPAPVAG-GGKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKIIS 408
Query: 249 MQSDWGVSIKVFLLFSN 299
MQ+DWG + F N
Sbjct: 409 MQTDWGGEYQKLNTFFN 425
>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513, partial [Sorghum bicolor]
Length = 757
Score = 253 bits (645), Expect(3) = e-134
Identities = 130/258 (50%), Positives = 176/258 (68%), Gaps = 2/258 (0%)
Frame = +1
Query: 1717 LIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPIC 1896
L+ L + F+LKDLG +HYFLG+ R S+G+ L Q KY D+L ++GMS K TP+
Sbjct: 467 LLSDLQKDFALKDLGDLHYFLGIEVKRDSNGLVLSQGKYANDILVRSGMSKSKPVHTPLP 526
Query: 1897 SNTKLSL--GDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKIC 2070
S K+S+ GD ++ YRS VGALQYLT+T PDISF VNK+ QFL APT H
Sbjct: 527 STQKISITDGDKLGEEDCTRYRSLVGALQYLTLTRPDISFAVNKVCQFLHAPTTTHLSAV 586
Query: 2071 NRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSK 2250
R+LRY++G+ GL + + ++ AD A +DDRRST G+ +FLG NLI+W+++
Sbjct: 587 KRILRYIQGTSKFGLRIRKSKCRIVSAFSYADWAGDVDDRRSTGGFAVFLGENLISWTAQ 646
Query: 2251 KQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVY 2430
KQ V+RSSTE+EY+ALA AT E++W+ L AEL + A + LW DN+GA L++NPV+
Sbjct: 647 KQATVSRSSTEAEYKALANATAEVMWVQKLLAELCVPHARVARLWCDNLGAKYLSANPVF 706
Query: 2431 HARTKHIEIDVHFIRTRL 2484
HARTKHIEID HF+R R+
Sbjct: 707 HARTKHIEIDFHFVRERV 724
Score = 244 bits (624), Expect(3) = e-134
Identities = 131/241 (54%), Positives = 167/241 (69%), Gaps = 7/241 (2%)
Frame = +2
Query: 980 STSPHTINTHPMHTMSKSGIFKPKIFS-------LAVSSSISEPTTVSEALSLPHWKSAM 1138
ST P N P T +SGI KPKI++ + +++ +EPTTV ALS P W AM
Sbjct: 217 STEPE--NPRPA-TRLQSGIIKPKIYTDGTVRWGMLANTADTEPTTVERALSDPKWVEAM 273
Query: 1139 DEEYHVLVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVD 1318
D E+ L+RN TW+LVP + I KW++KVK +ADGSV+R KARLVA+GF+Q G+D
Sbjct: 274 DVEHDALLRNKTWKLVPRPRGENIIGCKWLYKVKRRADGSVDRYKARLVAKGFKQRYGID 333
Query: 1319 YFETFSPVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHP 1498
Y +TFSPVVK TIRL+ S+AV+ GW + Q+DV NAFL+G L E YM QP GY K HP
Sbjct: 334 YEDTFSPVVKAATIRLILSIAVSNGWLLRQLDVQNAFLHGVLDEEDYMDQPLGYVSKLHP 393
Query: 1499 THVCRLVKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVND 1678
+VC+L KALY LKQAP+AWY +L LISL FKSS +D+SLFY ++ G + VLVYV+D
Sbjct: 394 GYVCKLEKALYELKQAPRAWYARLSSKLISLRFKSSRADTSLFYYNKGGHTIFVLVYVDD 453
Query: 1679 I 1681
I
Sbjct: 454 I 454
Score = 34.3 bits (77), Expect(3) = e-134
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 2466 FHPDKVKNKEVDVRHVPSEDQVADLLTKPLSVARF 2570
F ++V K +D+R + SEDQ+AD TK L V +F
Sbjct: 719 FVRERVAQKLLDIRFISSEDQLADGFTKSLPVTKF 753
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 271 bits (694), Expect(2) = e-134
Identities = 136/261 (52%), Positives = 179/261 (68%), Gaps = 2/261 (0%)
Frame = +1
Query: 1717 LIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPIC 1896
L+Q L F+LKDLG +HYFLG+ + +GI L Q KY DLL K GM CK A TP+
Sbjct: 877 LLQNLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLS 936
Query: 1897 SNTKLSLGDSAPF--DNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKIC 2070
+ KLSL + + ++ YRS VGALQYLT+T PDI+F VNK+ QFL APT HW
Sbjct: 937 VSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAV 996
Query: 2071 NRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSK 2250
R+LRYLK GL + G++DAD A C+DDRRST G+ IFLGSNL++W+++
Sbjct: 997 KRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNAR 1056
Query: 2251 KQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVY 2430
KQ V+RSSTESEY+A+A AT E++W+ +L AEL + ++ +W DN+GA L++NPV+
Sbjct: 1057 KQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPVF 1116
Query: 2431 HARTKHIEIDVHFIRTRLRIR 2493
HARTKHIE+D HF+R RL R
Sbjct: 1117 HARTKHIEVDYHFVRERLLSR 1137
Score = 236 bits (603), Expect(2) = e-134
Identities = 118/228 (51%), Positives = 159/228 (69%), Gaps = 7/228 (3%)
Frame = +2
Query: 1019 TMSKSGIFKPKIFSLAVS-------SSISEPTTVSEALSLPHWKSAMDEEYHVLVRNHTW 1177
T +SG+ K K+++ ++ EPT EAL +WK AMD EY LV+N TW
Sbjct: 637 TRLQSGVRKEKVYTDGTIKYKHSWFTASGEPTNDLEALKDKNWKLAMDSEYDALVKNKTW 696
Query: 1178 ELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVVKPLT 1357
LVP + I KW++K+K KADG+++R KARLVA+GF+Q G+DY +TFSPVVK T
Sbjct: 697 HLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 756
Query: 1358 IRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKALYGL 1537
IR++ SLAV++GW + Q+DV NAFL+G L E VYM+QP G+ED P HVC+L KALYGL
Sbjct: 757 IRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGL 816
Query: 1538 KQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
KQAP+AW+ +L L+ LGFK S +D+SLF+L++ + VLVYV+DI
Sbjct: 817 KQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLVYVDDI 864
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 269 bits (687), Expect(3) = e-133
Identities = 128/258 (49%), Positives = 178/258 (68%), Gaps = 2/258 (0%)
Frame = +1
Query: 1717 LIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPIC 1896
L++ LNQ F+LKDLG +HYFLG+ ++GI L Q KY D+L + MS CK+ TP+
Sbjct: 1132 LLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLS 1191
Query: 1897 SNTKLSLGDSAPF--DNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWKIC 2070
+ KLS + PF ++ YRS VGALQYLT+T PD+SF VNK+ Q+L APT HW
Sbjct: 1192 ISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAA 1251
Query: 2071 NRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWSSK 2250
R+LRYLK ++ GL + L + ++DAD A C+DDR ST G+ +F+G NL++WS++
Sbjct: 1252 KRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSWSAR 1311
Query: 2251 KQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNPVY 2430
KQ V+RSSTE+EY+ALA T E++WI +L ELG+ + +W DN+GA + +NPV+
Sbjct: 1312 KQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPVF 1371
Query: 2431 HARTKHIEIDVHFIRTRL 2484
HARTKHIE+D HF+R R+
Sbjct: 1372 HARTKHIEVDYHFVRERV 1389
Score = 229 bits (585), Expect(3) = e-133
Identities = 119/226 (52%), Positives = 157/226 (69%), Gaps = 5/226 (2%)
Frame = +2
Query: 1019 TMSKSGIFKPKIFS-----LAVSSSISEPTTVSEALSLPHWKSAMDEEYHVLVRNHTWEL 1183
T +SGI K KI++ + +S EP T+ EAL +WK AMD EY L++N TW L
Sbjct: 896 TRLQSGIRKEKIYTDGTVRYSCFTSSGEPQTLHEALGDKNWKEAMDSEYQALMKNKTWHL 955
Query: 1184 VPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVVKPLTIR 1363
VPS + I KW++KVK KADGS++R KAR+VA+GF+Q G+DY +TF+PVVK TIR
Sbjct: 956 VPSKKGQNIIDCKWVYKVKRKADGSLDRYKARVVAKGFKQRYGIDYEDTFNPVVKAATIR 1015
Query: 1364 LMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKALYGLKQ 1543
+ S+A++RGW + Q+DV NAFL+G L E V+M QP GYE K +VC+L KALYGLKQ
Sbjct: 1016 TILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQK--DGYVCKLDKALYGLKQ 1073
Query: 1544 APKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
AP+AWY +L L LGFKSS SD+SLF+ + + +LVYV+DI
Sbjct: 1074 APRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVAMFMLVYVDDI 1119
Score = 31.2 bits (69), Expect(3) = e-133
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 2466 FHPDKVKNKEVDVRHVPSEDQVADLLTKPLSVARFLSLCQKLGLT 2600
F ++V K + V ++ ++DQVAD TK LSV + L LT
Sbjct: 1384 FVRERVARKFLQVEYISTKDQVADGFTKTLSVRQLEMFRNNLNLT 1428
Score = 174 bits (440), Expect = 1e-40
Identities = 81/158 (51%), Positives = 110/158 (69%), Gaps = 1/158 (0%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGEY L T +GI CP+TH QNG VERKH+H+VE GL+LLAHAS+P+KFW A
Sbjct: 572 GGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEA 631
Query: 443 FSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSAK 622
F +LIN+LP+ ++ +P ++L +PDY+ L+TF AC+P RPYN KL FRS +
Sbjct: 632 FLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQ 691
Query: 623 CVFLGYSDHHKGYICLPPS-GKTIIARTVSFNEHEFPY 733
CVFLG+S+ HKG+ CL S G+ ++R V+F+E FP+
Sbjct: 692 CVFLGFSNIHKGFKCLDVSTGRVYVSRDVTFDEQVFPF 729
Score = 93.6 bits (231), Expect = 1e-15
Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +3
Query: 6 HQMHFSSIPHNTSTPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEV 185
HQ+ F ++ P E++H+DVWGPAS S+ YYV F+DD+++F WI+ L KSEV
Sbjct: 487 HQLPFPRSTSVSNNPLELIHSDVWGPASE-SVGAKKYYVSFIDDYSKFVWIYFLKHKSEV 545
Query: 186 YSVFLHFNAMVERQYNHKIKIMQSDWGVS-IKVFLLFSNLWVYISDILAHIH 338
+ F F +VERQ++ KI MQ+DWG +K+ F+ + + H H
Sbjct: 546 FQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTH 597
>dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]
Length = 821
Score = 271 bits (694), Expect(2) = e-133
Identities = 135/273 (49%), Positives = 187/273 (68%), Gaps = 3/273 (1%)
Frame = +1
Query: 1714 TLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHGIHLVQTKYIRDLLHKTGMSSCKSAPTPI 1893
TL+Q+L++ F+LKDLG +HYFLG+ + G+ L Q KY DLL + GM CK TP+
Sbjct: 516 TLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPL 575
Query: 1894 CSNTKLSLGDSA---PFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTLNHWK 2064
++ KLS+ + P D+ YRS VGALQYLT+T PDISF +NK+ QFL APT HW
Sbjct: 576 STSEKLSVNEGTLLGPQDST-QYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWA 634
Query: 2065 ICNRVLRYLKGSMHSGLFFQPVSRLCLEGYADAD*ASCIDDRRSTSGYCIFLGSNLIAWS 2244
R+LRY+K ++ +GL F L + G++DAD A DDRRST G+ +FLG NL++WS
Sbjct: 635 AVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWS 694
Query: 2245 SKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGALTLASNP 2424
++KQ V+RSSTE+EY+ALA AT E++W+ +L ELG+ ++ LW DN+GA L++NP
Sbjct: 695 ARKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANP 754
Query: 2425 VYHARTKHIEIDVHFIRTRLRIRKLTFAMYPLK 2523
++HARTKHIE+D HF+R R+ + L A K
Sbjct: 755 IFHARTKHIEVDFHFVRERVARKLLEIAYISTK 787
Score = 236 bits (601), Expect(2) = e-133
Identities = 118/226 (52%), Positives = 156/226 (69%), Gaps = 5/226 (2%)
Frame = +2
Query: 1019 TMSKSGIFKPKIFSLAVS-----SSISEPTTVSEALSLPHWKSAMDEEYHVLVRNHTWEL 1183
T +SGI K K+++ +S EP ++ EA++ HWK AMD EY L+ N TW L
Sbjct: 279 TRLQSGIRKEKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIENKTWHL 338
Query: 1184 VPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFSPVVKPLTIR 1363
VP + I KW++KVK KADGS++R KARLVA+GF+Q G+DY +TFSPVVK TIR
Sbjct: 339 VPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIR 398
Query: 1364 LMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRLVKALYGLKQ 1543
++ SLAV+RGW + Q+DV NAFL+G L E VYM QP GYE K+ P +VC+L KALYGLKQ
Sbjct: 399 IVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQ 458
Query: 1544 APKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
AP+AWY +L L LGF S +D+SLF+ + + +L+YV+DI
Sbjct: 459 APRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDI 504
Score = 95.9 bits (237), Expect = 1e-16
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +2
Query: 416 LPIKFWWHAFSTVVFLINKLPTPILHNQSPHQKLLGCSPDYQFLKTF*YACFPYTRPYNN 595
+PIKFW A +LIN+ P+ +++ P ++L P+Y L+ F A +P RPYN
Sbjct: 1 MPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLFKEKPNYTALRIFGCAVWPNLRPYNK 60
Query: 596 SKLMFRSAKCVFLGYSDHHKGYICLP-PSGKTIIARTVSFNEHEFPY 733
KL FRS +CVFLGYS+ HKG+ CL +G+ ++R V+F+E FP+
Sbjct: 61 HKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDVTFDESIFPF 107
>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1429
Score = 264 bits (675), Expect(2) = e-133
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 4/282 (1%)
Frame = +1
Query: 1696 NTAYIVTLIQQLNQTFSLKDLGAVHYFLGLGTIRTSHG-IHLVQTKYIRDLLHKTGMSSC 1872
NTA I ++ +LN TFSLK LG + YFLG+ T G +HL Q KYIRD+LH+ GM C
Sbjct: 1119 NTA-INLIVNKLNATFSLKQLGTLEYFLGIECKLTPSGALHLSQAKYIRDILHRAGMEDC 1177
Query: 1873 KSAPTPICSNTKLSLGDSAPFDNPFLYRSTVGALQYLTMTCPDISFVVNKLSQFLQAPTL 2052
K TP+ +N KLS + PFDNP LYRS VGALQY T+T P++ + V+K+ QF P +
Sbjct: 1178 KGISTPLPANLKLSKTGADPFDNPTLYRSIVGALQYATITRPELGYSVSKVCQFFAQPLV 1237
Query: 2053 NHWKICNRVLRYLKGSMHSGLFFQPVSR---LCLEGYADAD*ASCIDDRRSTSGYCIFLG 2223
+HW R+LRYLKGS+ GL P + L + + DAD AS IDDRRSTSG CIF G
Sbjct: 1238 SHWSAVKRILRYLKGSIDHGLTLLPATTSAPLSINAFCDADWASDIDDRRSTSGACIFFG 1297
Query: 2224 SNLIAWSSKKQHVVARSSTESEYRALALATTELVWITSLFAELGLSLASSSVLWTDNMGA 2403
NL++W SKKQ +VA+SS E+EYR+LA A +E++W+ SL EL + + V++ DN A
Sbjct: 1298 PNLVSWWSKKQTLVAKSSAEAEYRSLAHAASEVLWLQSLLHELKVPI-PPPVIYCDNQSA 1356
Query: 2404 LTLASNPVYHARTKHIEIDVHFIRTRLRIRKLTFAMYPLKIK 2529
+ ++ NPV H+RTKH+E+D+ F+R ++ + L + P +++
Sbjct: 1357 VAISHNPVLHSRTKHMELDIFFVREKVLNKSLVVSYIPAQLQ 1398
Score = 241 bits (616), Expect(2) = e-133
Identities = 120/235 (51%), Positives = 160/235 (68%)
Frame = +2
Query: 977 TSTSPHTINTHPMHTMSKSGIFKPKIFSLAVSSSISEPTTVSEALSLPHWKSAMDEEYHV 1156
TS+ T NTH M T SK+G KP +F ++ + +EPTTV +ALS HW AM +EY
Sbjct: 880 TSSPSPTTNTHHMLTRSKTGHLKPPLFP-TINLTTTEPTTVQQALSSIHWTEAMQQEYQA 938
Query: 1157 LVRNHTWELVPSSPLIHPISNKWIFKVKHKADGSVERLKARLVARGFEQHAGVDYFETFS 1336
L N TW LVP P I KWIF++K DG++ + KARLVA+GF Q G DY +T+S
Sbjct: 939 LQANKTWSLVPLPPHKRAIGCKWIFRIKENPDGTINKYKARLVAKGFNQKYGQDYSDTYS 998
Query: 1337 PVVKPLTIRLMFSLAVTRGWHIHQVDVSNAFLNGDLHEPVYMVQPQGYEDKAHPTHVCRL 1516
PVVKP+T+R + ++A+T W + Q+DV+NAFLNG LHE VYM QPQG+ + T VC+L
Sbjct: 999 PVVKPITVRTVLTIALTSKWPLIQLDVNNAFLNGQLHEDVYMQQPQGF-IQGESTLVCKL 1057
Query: 1517 VKALYGLKQAPKAWYDKLKGFLISLGFKSSVSDSSLFYLHQNGALVLVLVYVNDI 1681
KA+YGLKQAP+AWY+ L LIS GF+ S D SL +++G +L+L+YV+DI
Sbjct: 1058 HKAIYGLKQAPRAWYESLTNTLISFGFQQSKCDPSLLIFNKHGCCLLILIYVDDI 1112
Score = 162 bits (409), Expect = 8e-37
Identities = 80/159 (50%), Positives = 106/159 (66%), Gaps = 2/159 (1%)
Frame = +2
Query: 263 GGEYKGLSTLLKSMGIHFRHPCPYTHPQNGIVERKHQHVVETGLALLAHASLPIKFWWHA 442
GGE++ ++ L +GI R CP+TH QNG+VERKH+H+VE GL+LL+H+SLP +W HA
Sbjct: 641 GGEFRSFTSYLSQLGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSHSSLPYHYWDHA 700
Query: 443 FSTVVFLINKLPTPILHNQS-PHQKLLGCSPDYQFLKTF*YACFPYTRPYNNSKLMFRSA 619
F T V++IN+LP HN P + L PDY FL+ F AC+P PYNN K +RS
Sbjct: 701 FHTAVYIINRLPAS--HNHCIPLKVLFNNVPDYNFLRAFGCACYPLLTPYNNPKFQYRSK 758
Query: 620 KCVFLGYSDHHKGYICLP-PSGKTIIARTVSFNEHEFPY 733
+C+FLGYS +GY CL SG+ I++ V FNE FPY
Sbjct: 759 ECIFLGYST--RGYKCLDNKSGRIYISKDVLFNEKHFPY 795
Score = 88.6 bits (218), Expect = 4e-14
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +3
Query: 42 STPFEIVHTDVWGPASSYSIDGYIYYVQFVDDFTRFTWIFPLAEKSEVYSVFLHFNAMVE 221
++P E+++ D+WGPA S GY YY+ F+D F+++ W++ L +KSE ++F F A+ E
Sbjct: 567 NSPLELIYCDLWGPAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAE 626
Query: 222 RQYNHKIKIMQSDWGVSIKVFLLF-SNLWVYISDILAHIH 338
Q N KIK +QSDWG + F + S L + I H H
Sbjct: 627 LQLNTKIKAIQSDWGGEFRSFTSYLSQLGIIHRIICPHTH 666