BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00026875
         (3138 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012850060.1| PREDICTED: uncharacterized protein LOC105969...   170   1e-58
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   169   2e-57
ref|XP_015699018.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   172   3e-57
gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subc...   170   8e-56
gb|ABA96940.1| retrotransposon protein, putative, Ty3-gypsy subc...   171   8e-56
dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I...   169   1e-55
gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|1087...   167   2e-55
emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group]        169   2e-55
gb|AAT69667.1| putative polyprotein [Oryza sativa Japonica Group]     169   2e-55
gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group]     169   2e-55
gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subc...   169   2e-55
gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japoni...   169   2e-55
emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]                168   2e-55
gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subc...   169   3e-55
dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Grou...   169   3e-55
gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japo...   169   3e-55
gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]     169   3e-55
emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group] gi...   169   3e-55
gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subc...   166   4e-55
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc...   169   4e-55

>ref|XP_012850060.1| PREDICTED: uncharacterized protein LOC105969829 [Erythranthe guttata]
          Length = 1059

 Score =  170 bits (430), Expect(2) = 1e-58
 Identities = 119/303 (39%), Positives = 162/303 (53%), Gaps = 7/303 (2%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   MDL+  +F  YLDQFVI FIDDILVYS + EEH  +L +V L+T      
Sbjct: 585  FGLTNAPAAFMDLIIRIFRKYLDQFVIVFIDDILVYSRNDEEHRNHLEMV-LQTLRENQL 643

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRT--PIKCVVS*ALLDIT 549
                        Q  FLG++ + + I V P+K+E V N  I R    I+  +  A     
Sbjct: 644  YAKFSKCEFWLRQFHFLGHVISKEGIAVDPSKIEAVCNWSIPRNVGEIRSFLGLA----- 698

Query: 550  KGFGFFKYIY-----IYSILDDPTRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIE 714
               G+++ I      I + L   TRK  K+ WT +CE SFQ  K+RL S  +L + +   
Sbjct: 699  ---GYYRRIVPNFSKIATPLSRLTRKEVKYQWTLECESSFQELKKRLNSAPILALPDKTG 755

Query: 715  DFCNLQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI*CH*LY 894
            ++       K  +               +  K +E NYPTHD ELAA+V+ +KI  H LY
Sbjct: 756  NYVVYSDASKHGLGAVLMQNRNVIAYASRQLKDYEKNYPTHDLELAAVVFALKIWRHYLY 815

Query: 895  REKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG*SERNI 1074
             EK  I+ DHKSLKYF + K + +  +RRWLELVKD D +I YH  K NVVA+  S +++
Sbjct: 816  GEKCSIFTDHKSLKYFFTQKEL-NMRQRRWLELVKDYDCEILYHPGKPNVVADALSRKSM 874

Query: 1075 QIL 1083
              L
Sbjct: 875  SAL 877



 Score = 87.8 bits (216), Expect(2) = 1e-58
 Identities = 41/60 (68%), Positives = 48/60 (80%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LNK+T+KNKYPL R +DLFDQL G++V SKID RS YHQ KI K+DIP T F+T Y HYE
Sbjct: 520 LNKVTVKNKYPLPRIDDLFDQLQGSTVYSKIDLRSGYHQLKIKKEDIPKTAFRTCYGHYE 579



 Score = 90.5 bits (223), Expect = 8e-15
 Identities = 52/119 (43%), Positives = 73/119 (61%)
 Frame = +1

Query: 1492 ILERDGDVAYRFVLPLELATIHNVFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVV 1671
            IL+R G  AYR  LP +L+ IHNVF+VSMLR +I +P+ V+  EPL+++P++++ E+   
Sbjct: 938  ILDRIGGQAYRLALPPQLSKIHNVFHVSMLRKHIPNPNHVLETEPLDLSPNLSFTEEPSQ 997

Query: 1672 ILTRKIHKLRNRDITLVKIQWNRHGKKKSNMGA*S*DLSQVFRVIPSTE*A*NFEDEIF 1848
            IL RK+ KLRN+ I L KI W  H   +S       +   V R    TE   NF D+IF
Sbjct: 998  ILDRKVRKLRNKGIRLAKILWKNHSPDESTWEI---EDEIVSRYQELTEKGTNFGDKIF 1053


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  169 bits (429), Expect(2) = 2e-57
 Identities = 122/332 (36%), Positives = 174/332 (52%), Gaps = 12/332 (3%)
 Frame = +1

Query: 184  MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 363
            ++  FGL+NAP   MDLM+ VF  YLD FVI FIDDIL+YS    +HE++L +V L+T  
Sbjct: 796  LVMSFGLTNAPAAFMDLMTRVFRPYLDSFVIVFIDDILIYSRSRGDHEQHLRVV-LQTLR 854

Query: 364  XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 543
                           D V FLG++ + + I V PAK+E + + W   T +  + S   L 
Sbjct: 855  DQRLYAKFSKCQFWLDSVAFLGHVVSKEGIMVDPAKIEAIRD-WARPTSVTEIRSFVGL- 912

Query: 544  ITKGFGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTI 711
               G+ + +++  +S L  P    TR    FVW+E+CE SF   K  L +  +L +    
Sbjct: 913  --AGY-YRRFVESFSTLATPLTRLTRVDVPFVWSEECEASFLRLKELLTTAPILTLPVEG 969

Query: 712  EDF--------CNLQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYP 867
            E F          L   L +  RV   A         +  K HE NYPTHD ELAA+V+ 
Sbjct: 970  EGFTVYCDASGVGLGCVLMQQDRVIAYA--------SRQLKIHERNYPTHDLELAAVVFA 1021

Query: 868  IKI*CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVV 1047
            +KI  H LY  + EIY DH+SL+Y  S +R  +  +RRW+EL+KD D  I YH  KANVV
Sbjct: 1022 LKIWRHYLYGVRCEIYTDHRSLQYIMS-QRDLNSRQRRWIELLKDYDLSILYHPGKANVV 1080

Query: 1048 ANG*SERNIQILEDLLRGCILFMMIIERSICL 1143
            A+  S + + +      G + F+ + ER + +
Sbjct: 1081 ADALSRKAVSM------GSLAFLSVEERPLAM 1106



 Score = 84.3 bits (207), Expect(2) = 2e-57
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LNK+T+KN+YPL R +DLFDQL GASV SKID R +YHQ +I   DIP T F+T Y HYE
Sbjct: 735 LNKVTVKNRYPLPRIDDLFDQLQGASVFSKIDLRFDYHQLRIRAADIPKTAFRTRYGHYE 794


>ref|XP_015699018.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC102718330
            [Oryza brachyantha]
          Length = 1839

 Score =  172 bits (435), Expect(2) = 3e-57
 Identities = 111/300 (37%), Positives = 165/300 (55%), Gaps = 5/300 (1%)
 Frame = +1

Query: 184  MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 363
            ++ PFGL+NAP + M+LM+ VF  YLD+FV+ FIDDIL+YS D +EH ++L  V L    
Sbjct: 965  LVVPFGLTNAPAVFMNLMNKVFMKYLDKFVVVFIDDILIYSKDRKEHAEHLRTV-LHILR 1023

Query: 364  XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 543
                           ++V FLG++   + + V P+ V+ +   W  + P       + L 
Sbjct: 1024 KNKLYAKFSKCEFWMNEVTFLGHVINQEGVAVNPSNVKTIVE-W--KPPTNVTEVRSFLG 1080

Query: 544  ITKGFGFF-KYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNT 708
            +    G++ ++I  +S +  P     RK  KF+W++ CE+SFQ  K+RL +  VL +   
Sbjct: 1081 MA---GYYRRFIEGFSKISGPLSKLLRKDVKFIWSKDCEQSFQELKKRLTTAPVLTLPRM 1137

Query: 709  IEDFCNLQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI*CH* 888
              +F       K  +               +  + HE+NYPTHD ELAA+VY +KI  H 
Sbjct: 1138 GMNFTVYCDASKSGLGCVLMQNQKVISYASRQLRSHEVNYPTHDLELAAVVYALKIWRHY 1197

Query: 889  LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG*SER 1068
            LY  K E+Y DHKSLKY  + K + +  +RRWLEL+KD D +I+YH  KANVVA+  S +
Sbjct: 1198 LYGAKCELYTDHKSLKYIFTQKDL-NMRQRRWLELIKDYDLEINYHPGKANVVADALSRK 1256



 Score = 81.3 bits (199), Expect(2) = 3e-57
 Identities = 40/60 (66%), Positives = 44/60 (73%)
 Frame = +2

Query: 2    LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
            LNK+TIKNKYPL R +DLFDQL GA V SKID RS YH  KI  +DIP T F + Y HYE
Sbjct: 904  LNKVTIKNKYPLPRIDDLFDQLKGAGVFSKIDLRSGYHXIKIRSEDIPKTGFVSRYGHYE 963



 Score =  104 bits (259), Expect(2) = 8e-21
 Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
 Frame = +1

Query: 1006 DYKIHYHHIKANVVANG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDY 1182
            D+   YH         G +ER  QILED+LR C L F    +  + + E  +    +  Y
Sbjct: 1514 DFSTAYHP-----QTGGQTERINQILEDMLRACALDFGDAWDEQLPMAEFAY----NNSY 1564

Query: 1183 QNGSI*SPI**EK*MSYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDG---RNL 1353
            Q+    +P         L GR  R   C                E+ + N       R  
Sbjct: 1565 QSSIKMAPY------EALYGRKCRSPVC----WYETGENKLIGPELVRNNQISIDIIRER 1614

Query: 1354 MRIREGRTYIMK*ERK---------IFFLKVALTKGIVRFGRKGKLRLRFIVPFEILERD 1506
            ++I + R  I   +R+         + +LKV+  +G  RFG +GKL  R+I PFEI++R 
Sbjct: 1615 LKIAQSRQKIYADKRRRELEFTVGDLVYLKVSPNRGTKRFGVQGKLSPRYIGPFEIVDRK 1674

Query: 1507 GDVAYRFVLPLELATIHNVFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRK 1686
            G VAY+  LP  L+T+HN F+VS LR  + +P   + +E +++ PD++Y E+   IL   
Sbjct: 1675 GTVAYKLKLPKTLSTVHNTFHVSQLRKCLKEPEEKIQYEQVQLKPDLSYDERPSKILAED 1734

Query: 1687 IHKLRNRDITLVKIQWNRHGKKKS 1758
              +LR++ I   K+QW  H  +++
Sbjct: 1735 WKQLRSKVIKFCKVQWKNHSAREA 1758



 Score = 26.9 bits (58), Expect(2) = 8e-21
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
 Frame = +2

Query: 1751 KKATWEREVEI*AKYS-------ELFHQPSKLEIS----RTKFF 1849
            ++ATWE+E ++   Y        ++FH+ SK E+S     +KFF
Sbjct: 1756 REATWEKEDDLRKNYPYLFSKILKIFHRASKCEVSSSSAASKFF 1799


>gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1522

 Score =  170 bits (430), Expect(2) = 8e-56
 Identities = 115/296 (38%), Positives = 163/296 (55%), Gaps = 4/296 (1%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 709  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 767

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 768  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTE-W---TPPRTVTQVRSFLGLAG 823

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDFC 723
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 824  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLTLPDQTKDFQ 882

Query: 724  NLQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI*CH*LYREK 903
                  ++ V               +  + HE NYPTHD ELAA+V+ +KI  H L   +
Sbjct: 883  VYCDASRQGVGCVLMQDGKLVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNR 942

Query: 904  YEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG*SERN 1071
             E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  S ++
Sbjct: 943  CEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKS 997



 Score = 78.6 bits (192), Expect(2) = 8e-56
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 644 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGSFE 703



 Score = 97.4 bits (241), Expect(2) = 3e-18
 Identities = 78/246 (31%), Positives = 118/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1260 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1309

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1310 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1368

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1369 LAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1428

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK + IL     + RN+ I   K+QW+ 
Sbjct: 1429 VFHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPIRILETSERRTRNKVIRFCKVQWSH 1488

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1489 HSEEEA 1494



 Score = 25.4 bits (54), Expect(2) = 3e-18
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1491 EEEATWEREDELKATHPHLFASSSE 1515


>gb|ABA96940.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1112

 Score =  171 bits (432), Expect(2) = 8e-56
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 499  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 557

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 558  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTE-W---TPPRTVTQVRSFLGLAG 613

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 614  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLTLPDQTKDFQ 672

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 673  VYCDASRQGLGCVLMKDGKVVSYA--------SRQLRSHEGNYPTHDLELAAVVHALKIW 724

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 725  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 783

Query: 1060 SERN 1071
            S ++
Sbjct: 784  SRKS 787



 Score = 77.8 bits (190), Expect(2) = 8e-56
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 434 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 493


>dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1727

 Score =  169 bits (428), Expect(2) = 1e-55
 Identities = 121/305 (39%), Positives = 171/305 (56%), Gaps = 13/305 (4%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  YLD+FV+ FIDDIL+YS   EEHE++L +  L+       
Sbjct: 914  FGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLA-LEKLREHQL 972

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG++ +   + V P+ VE+V + W     +  V S   L +   
Sbjct: 973  YAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLS-WKQPKTVSEVRS--FLGLA-- 1027

Query: 556  FGFF-KYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF 720
             G++ ++I  +S +  P     +K  K+ WTE CERSFQ  K+RLVS  VL + ++ +DF
Sbjct: 1028 -GYYRRFIENFSKIARPMTRLLQKDGKYKWTEDCERSFQELKKRLVSAPVLILPDSRKDF 1086

Query: 721  ---CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI 876
               C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI
Sbjct: 1087 QVYCDASRHGLGCVLMQEGKVVAYA--------SRQLRPHENNYPTHDLELAAVVHALKI 1138

Query: 877  *CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG 1056
              H LY  + EIY DHKSLKY   T+   +  +RRWLEL+KD D +IHYH  KANVVA+ 
Sbjct: 1139 WRHYLYGNRTEIYTDHKSLKYI-FTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADA 1197

Query: 1057 *SERN 1071
             S ++
Sbjct: 1198 LSRKS 1202



 Score = 78.6 bits (192), Expect(2) = 1e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2    LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
            LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 849  LNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFE 908



 Score = 95.1 bits (235), Expect(2) = 2e-17
 Identities = 79/246 (32%), Positives = 120/246 (48%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C+L F    ++++   E  +    +  YQ     SP       
Sbjct: 1465 DGQTERVNQILEDMLRACVLDFGGSWDKNLPYPEFSY----NNSYQASLQMSP------N 1514

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     + L R+ + R  +Y     R 
Sbjct: 1515 EALYGRKCRTPLLWDQIGERQVFGTDILREAEEKVKIIQQRL-RVAQSRQKSYADNRRRD 1573

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ PF+I+ R G+VAY+  LP  +A IH+
Sbjct: 1574 LTFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHD 1633

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P+   + + +E+  D+TY EK V IL     K RNR I   K+QW+ 
Sbjct: 1634 VFHVSQLKKCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQWSN 1693

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1694 HSEEEA 1699



 Score = 24.6 bits (52), Expect(2) = 2e-17
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ + +  LF   S+
Sbjct: 1696 EEEATWEREDELKSAHPHLFSSSSE 1720


>gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|108708868|gb|ABF96663.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1760

 Score =  167 bits (424), Expect(2) = 2e-55
 Identities = 117/304 (38%), Positives = 170/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 947  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKYEEEHEQHLRLV-LEKLREHQL 1005

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG++ T + + V P+ VE+V   W   TP K V          G
Sbjct: 1006 YAKFSKCDFWLTEVKFLGHVITARGVAVDPSNVESVTK-W---TPPKTVSQIRSFLGLAG 1061

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF WT +C++SF+  K++LVS  VL + + ++DF 
Sbjct: 1062 Y-YRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSVPVLILPDPMKDFQ 1120

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  R+   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 1121 VYCDASRHGLGCVLMQEGRMVAYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 1172

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 1173 RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADAL 1231

Query: 1060 SERN 1071
            S ++
Sbjct: 1232 SRKS 1235



 Score = 79.7 bits (195), Expect(2) = 2e-55
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +2

Query: 2    LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
            LN++TIKNKYPL R +DLFDQL GA V SKID RS YHQ +I ++DIP T F T Y  YE
Sbjct: 882  LNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYE 941



 Score = 92.0 bits (227), Expect(2) = 1e-16
 Identities = 75/246 (30%), Positives = 118/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1498 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1547

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    + E+K     R  +RI + R  +Y     R+
Sbjct: 1548 EALYGRKCRTPLFWDQTGERQLFGTEVLADAEEK-VRIIRERLRIAQSRQKSYADNRRRE 1606

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P++ILER G+VAY+  LP  +  IH+
Sbjct: 1607 LTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGEVAYQLELPSNMIGIHD 1666

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + E +++  D+TY EK V IL     + RN+     ++QW+ 
Sbjct: 1667 VFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRILDTSERRTRNKVTRFCRVQWSH 1726

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1727 HSEEEA 1732



 Score = 25.4 bits (54), Expect(2) = 1e-16
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1729 EEEATWEREDELKAAHPHLFTSSSE 1753


>emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group]
          Length = 1525

 Score =  169 bits (429), Expect(2) = 2e-55
 Identities = 122/314 (38%), Positives = 173/314 (55%), Gaps = 15/314 (4%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 712  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 770

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 771  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 826

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 827  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 885

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 886  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 937

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 938  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 996

Query: 1060 SER---NIQILEDL 1092
            S +   N+  +E+L
Sbjct: 997  SRKSYCNVAWVEEL 1010



 Score = 77.8 bits (190), Expect(2) = 2e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 647 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 706



 Score = 97.1 bits (240), Expect(2) = 4e-18
 Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1263 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1312

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1313 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1371

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1372 LVFQVGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1431

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     + RN+ I   K+QW+ 
Sbjct: 1432 VFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRILETSERRTRNKVIRFCKVQWSH 1491

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1492 HSEEEA 1497



 Score = 25.4 bits (54), Expect(2) = 4e-18
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1494 EEEATWEREDELKATHPHLFTSSSE 1518


>gb|AAT69667.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  169 bits (429), Expect(2) = 2e-55
 Identities = 122/314 (38%), Positives = 173/314 (55%), Gaps = 15/314 (4%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 711  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 769

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 770  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 825

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 826  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 884

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 885  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 936

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 937  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 995

Query: 1060 SER---NIQILEDL 1092
            S +   N+  +E+L
Sbjct: 996  SRKSYCNVAWVEEL 1009



 Score = 77.8 bits (190), Expect(2) = 2e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 646 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 705



 Score = 98.2 bits (243), Expect(2) = 2e-18
 Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1262 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1311

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1312 EALYGRRCRTPLFWYQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1370

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ +LER G+VAY+  LP  +  IHN
Sbjct: 1371 LAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRVLERRGEVAYQLELPSNMLGIHN 1430

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     K RN+ I   K+QW+ 
Sbjct: 1431 VFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQWSH 1490

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1491 HSEEEA 1496



 Score = 25.4 bits (54), Expect(2) = 2e-18
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1493 EEEATWEREDELKATHPHLFASSSE 1517


>gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  169 bits (429), Expect(2) = 2e-55
 Identities = 122/314 (38%), Positives = 173/314 (55%), Gaps = 15/314 (4%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 711  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 769

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 770  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 825

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 826  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 884

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 885  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 936

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 937  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 995

Query: 1060 SER---NIQILEDL 1092
            S +   N+  +E+L
Sbjct: 996  SRKSHCNVAWVEEL 1009



 Score = 77.8 bits (190), Expect(2) = 2e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 646 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 705



 Score = 97.4 bits (241), Expect(2) = 3e-19
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1262 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1311

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1312 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1370

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1371 LAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1430

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     K RN+ I   K+QW+ 
Sbjct: 1431 VFHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQWSH 1490

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1491 HSEEEA 1496



 Score = 28.5 bits (62), Expect(2) = 3e-19
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF  PS+
Sbjct: 1493 EEEATWEREDELKATHPHLFASPSE 1517


>gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1406

 Score =  169 bits (429), Expect(2) = 2e-55
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 761  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 819

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 820  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 875

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 876  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 934

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 935  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 986

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 987  RHYLISNRCEVYTDHKSLKYI-FTQADLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 1045

Query: 1060 SERN 1071
            S ++
Sbjct: 1046 SRKS 1049



 Score = 77.8 bits (190), Expect(2) = 2e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 696 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 755


>gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|62733520|gb|AAX95637.1| Reverse transcriptase
            (RNA-dependent DNA polymerase), putative [Oryza sativa
            Japonica Group] gi|108710593|gb|ABF98388.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1229

 Score =  169 bits (429), Expect(2) = 2e-55
 Identities = 122/314 (38%), Positives = 173/314 (55%), Gaps = 15/314 (4%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 416  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 474

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 475  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 530

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 531  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 589

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 590  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 641

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 642  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 700

Query: 1060 SER---NIQILEDL 1092
            S +   N+  +E+L
Sbjct: 701  SRKSYCNVAWVEEL 714



 Score = 77.8 bits (190), Expect(2) = 2e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 351 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 410



 Score = 97.4 bits (241), Expect(2) = 3e-18
 Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 967  DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1016

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1017 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1075

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ +LER G+VAY+  LP  +  IHN
Sbjct: 1076 LAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRVLERRGEVAYQLELPSNMLGIHN 1135

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     K RN+ I   K+QW+ 
Sbjct: 1136 VFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQWSH 1195

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1196 HSEEEA 1201



 Score = 25.4 bits (54), Expect(2) = 3e-18
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1198 EEEATWEREDELKATHPHLFASSSE 1222


>emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]
          Length = 1641

 Score =  168 bits (426), Expect(2) = 2e-55
 Identities = 119/305 (39%), Positives = 169/305 (55%), Gaps = 13/305 (4%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  YLD+FV+ FIDDIL+YS   EEHE++L +  L+       
Sbjct: 828  FGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLA-LEKLREHQL 886

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG++ +   + V P+ VE+V N W     +  V S   L +   
Sbjct: 887  YAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLN-WKQPKTVSEVRS--FLGLA-- 941

Query: 556  FGFF-KYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF 720
             G++ ++I  +S +  P     +K  K+ WTE CE+SFQ  K+RLV+  VL + ++ +DF
Sbjct: 942  -GYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCEQSFQKLKKRLVTAPVLILPDSRKDF 1000

Query: 721  --------CNLQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI 876
                      L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI
Sbjct: 1001 QVYCDASRLGLGCVLMQEGKVVAYA--------SRQLRPHENNYPTHDLELAAVVHALKI 1052

Query: 877  *CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG 1056
              H LY  + EIY DHKSLKY   T+   +  +RRWLEL+KD D +IHYH  KANVVA+ 
Sbjct: 1053 WRHYLYGNRTEIYTDHKSLKYI-FTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADA 1111

Query: 1057 *SERN 1071
             S ++
Sbjct: 1112 LSRKS 1116



 Score = 78.6 bits (192), Expect(2) = 2e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 763 LNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFE 822



 Score = 97.4 bits (241), Expect(2) = 5e-18
 Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C+L F    ++++   E  +    +  YQ     SP       
Sbjct: 1379 DGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSY----NNSYQASLQMSP------N 1428

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K       L R+ + R  +Y     R 
Sbjct: 1429 EALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERL-RVAQSRQKSYADNRRRD 1487

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ PF+I+ R G+VAY+  LP  +A IH+
Sbjct: 1488 LVFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPQSMAGIHD 1547

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P+   N + +E+  D+TY EK + IL     K RNR I   K+QW+ 
Sbjct: 1548 VFHVSQLKKCLRVPTEEANPDRIELQEDLTYVEKPIRILEVSERKTRNRVIRFCKVQWSN 1607

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1608 HSEEEA 1613



 Score = 24.6 bits (52), Expect(2) = 5e-18
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ + +  LF   S+
Sbjct: 1610 EEEATWEREDELKSAHPHLFSSSSE 1634


>gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1595

 Score =  169 bits (427), Expect(2) = 3e-55
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 782  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 840

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 841  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 896

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 897  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 955

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 956  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 1007

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 1008 RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 1066

Query: 1060 SERN 1071
            S ++
Sbjct: 1067 SRKS 1070



 Score = 77.8 bits (190), Expect(2) = 3e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 717 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 776



 Score = 94.4 bits (233), Expect(2) = 2e-17
 Identities = 77/246 (31%), Positives = 116/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1333 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1382

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1383 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1441

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+  F  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1442 LAFETGDYVYLRVTPLRGVHHFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1501

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     + RN+ I   K+QW+ 
Sbjct: 1502 VFHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPTRILETSERRTRNKVIRFCKVQWSH 1561

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1562 HSEEEA 1567



 Score = 25.4 bits (54), Expect(2) = 2e-17
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1564 EEEATWEREDELKATHPHLFASSSE 1588


>dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|20804440|dbj|BAB92137.1| putative polyprotein [Oryza
            sativa Japonica Group] gi|52353682|gb|AAU44248.1|
            putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  169 bits (427), Expect(2) = 3e-55
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 711  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 769

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 770  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 825

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 826  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 884

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 885  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 936

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 937  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 995

Query: 1060 SERN 1071
            S ++
Sbjct: 996  SRKS 999



 Score = 77.8 bits (190), Expect(2) = 3e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 646 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 705



 Score = 98.2 bits (243), Expect(2) = 2e-18
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1262 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1311

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1312 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1370

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1371 LVFQVGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1430

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     K RN+ I   K+QW+ 
Sbjct: 1431 VFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQWSH 1490

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1491 HSEEEA 1496



 Score = 25.4 bits (54), Expect(2) = 2e-18
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1493 EEEATWEREDELKATHPHLFASSSE 1517


>gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  169 bits (427), Expect(2) = 3e-55
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 711  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 769

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 770  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 825

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 826  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 884

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 885  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 936

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 937  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 995

Query: 1060 SERN 1071
            S ++
Sbjct: 996  SRKS 999



 Score = 77.8 bits (190), Expect(2) = 3e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 646 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 705



 Score = 94.4 bits (233), Expect(2) = 2e-17
 Identities = 77/246 (31%), Positives = 116/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1262 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1311

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1312 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1370

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+  F  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1371 LAFETGDYVYLRVTPLRGVHHFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1430

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     + RN+ I   K+QW+ 
Sbjct: 1431 VFHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPTRILETSERRTRNKVIRFCKVQWSH 1490

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1491 HSEEEA 1496



 Score = 25.4 bits (54), Expect(2) = 2e-17
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1493 EEEATWEREDELKATHPHLFASSSE 1517


>gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  169 bits (427), Expect(2) = 3e-55
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 711  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 769

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 770  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 825

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 826  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 884

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 885  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 936

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 937  QHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 995

Query: 1060 SERN 1071
            S ++
Sbjct: 996  SRKS 999



 Score = 77.8 bits (190), Expect(2) = 3e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 646 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 705



 Score = 96.7 bits (239), Expect(2) = 5e-18
 Identities = 78/246 (31%), Positives = 118/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1262 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1311

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1312 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1370

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF +KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1371 LAFETGDYVYLRVTPLRGVHRFQKKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1430

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     + RN+ I   K+QW+ 
Sbjct: 1431 VFHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPTRILETNERRTRNKVIRFCKVQWSH 1490

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1491 HTEEEA 1496



 Score = 25.4 bits (54), Expect(2) = 5e-18
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1493 EEEATWEREDELKATHPHLFASSSE 1517


>emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group]
            gi|38347085|emb|CAE05109.2| OSJNBa0001M07.5 [Oryza sativa
            Japonica Group]
          Length = 1471

 Score =  169 bits (427), Expect(2) = 3e-55
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 658  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 716

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 717  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 772

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 773  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQ 831

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 832  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 883

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 884  RHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 942

Query: 1060 SERN 1071
            S ++
Sbjct: 943  SRKS 946



 Score = 77.8 bits (190), Expect(2) = 3e-55
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA+V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 593 LNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 652



 Score = 95.5 bits (236), Expect(2) = 1e-17
 Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1209 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1258

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1259 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIVQSRQKSYADNRRRE 1317

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1318 LAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1377

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     + RN+ I   K+QW+ 
Sbjct: 1378 VFHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPTRILETSERRTRNKVIRFCKVQWSH 1437

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1438 HSEEEA 1443



 Score = 25.4 bits (54), Expect(2) = 1e-17
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1440 EEEATWEREDELKATHPHLFASSSE 1464


>gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1672

 Score =  166 bits (421), Expect(2) = 4e-55
 Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 13/305 (4%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ V   +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 859  FGLTNAPAFFMNLMNKVLMEFLDKFVVVFIDDILIYSTSEEEHEQHLRLV-LEKLKEHQL 917

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG++ T + + V P+ VE+V   W   TP K V          G
Sbjct: 918  YAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTK-W---TPPKTVSQIRSFLGLAG 973

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF WT +C++SF+  K++LVS  VL + + ++DF 
Sbjct: 974  Y-YRRFIENFSRIARPMTQLLKKDEKFKWTTECDKSFEELKKKLVSAPVLILPDQMKDFQ 1032

Query: 721  --CNLQ------*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI 876
              C+          ++  + V + +         +  + HE NYPTHD ELAA+V+ +KI
Sbjct: 1033 VYCDASRHGLGCVLMQEGIVVAYAS---------RQLRPHEGNYPTHDLELAAVVHALKI 1083

Query: 877  *CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG 1056
              H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+ 
Sbjct: 1084 WRHYLIGNRCEVYTDHKSLKYI-FTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADA 1142

Query: 1057 *SERN 1071
             S ++
Sbjct: 1143 LSRKS 1147



 Score = 79.7 bits (195), Expect(2) = 4e-55
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA V SKID RS YHQ +I ++DIP T F T Y  YE
Sbjct: 794 LNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYE 853



 Score = 90.5 bits (223), Expect(2) = 3e-16
 Identities = 74/246 (30%), Positives = 118/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1410 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1459

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1460 EALYGRKCRTPLFWDQTGERQLFGTEVLAEAEEK-VRIIRERLRIAQSRQKSYADNRRRE 1518

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P++ILER G+VAY+  LP  +  IH+
Sbjct: 1519 LTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGEVAYQLELPSNMIGIHD 1578

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +++  D+TY EK + IL     + RN+     ++QW+ 
Sbjct: 1579 VFHVSQLKKCLRVPEEQADSKHIDIQEDLTYVEKPIRILDTSERRTRNKVNRFCRVQWSH 1638

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1639 HSEEEA 1644



 Score = 25.4 bits (54), Expect(2) = 3e-16
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1641 EEEATWEREDELKAAHPHLFTSSSE 1665


>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1548

 Score =  169 bits (429), Expect(2) = 4e-55
 Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
 Frame = +1

Query: 196  FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 375
            FGL+NAP   M+LM+ VF  +LD+FV+ FIDDIL+YS   EEHE++L +V L+       
Sbjct: 735  FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLQLV-LEKLKEHQL 793

Query: 376  XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 555
                        +V FLG+I   + + V PA VE+V   W   TP + V          G
Sbjct: 794  YAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTK-W---TPPRTVTQVRSFLGLAG 849

Query: 556  FGFFKYIYIYSILDDP----TRKSKKFVWTEKCERSFQ*FKRRLVSTSVLKILNTIEDF- 720
            + + ++I  +S +  P     +K +KF+W+ +C RSF+  KRRLVS  VL + +  +DF 
Sbjct: 850  Y-YRRFIENFSKIAKPMTQLLKKEEKFIWSVECNRSFEELKRRLVSAPVLILPDQTKDFQ 908

Query: 721  --CN-----LQ*CLKRWVRVCFNA*W*GA*LYFKIAKGHELNYPTHDFELAAIVYPIKI* 879
              C+     L   L +  +V   A         +  + HE NYPTHD ELAA+V+ +KI 
Sbjct: 909  VYCDASRQGLGCVLMQDGKVVSYA--------SRQLRPHEGNYPTHDLELAAVVHALKIW 960

Query: 880  CH*LYREKYEIYNDHKSLKYFSSTKRVEHESKRRWLELVKD*DYKIHYHHIKANVVANG* 1059
             H L   + E+Y DHKSLKY   T+   +  +RRWLEL+KD D  IHYH  KANVVA+  
Sbjct: 961  RHYLISNRCEVYTDHKSLKYI-FTQADLNLRQRRWLELIKDYDMGIHYHPGKANVVADAL 1019

Query: 1060 SERN 1071
            S ++
Sbjct: 1020 SRKS 1023



 Score = 76.6 bits (187), Expect(2) = 4e-55
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = +2

Query: 2   LNKLTIKNKYPLSRTEDLFDQLNGASVLSKIDSRSEYHQFKI*KKDIPSTTFKT*YRHYE 181
           LN++TIKNKYPL R +DLFDQL GA V SKID RS YHQ +I ++DIP T F T Y  +E
Sbjct: 670 LNEVTIKNKYPLPRIDDLFDQLKGAIVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFE 729



 Score = 98.2 bits (243), Expect(2) = 2e-18
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
 Frame = +1

Query: 1051 NG*SERNIQILEDLLRGCIL-FMMIIERSICLYEIFF**QLSVDYQNGSI*SPI**EK*M 1227
            +G +ER  QILED+LR C L F    ++S+   E  +    +  YQ     +P       
Sbjct: 1286 DGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSY----NNSYQASLQMAPF------ 1335

Query: 1228 SYLLGRSWREEKCRVXXXXXXXXXXXXXXEIEKKNSHDGRNLMRIREGR--TYIMK*ERK 1401
              L GR  R                    E E+K     R  +RI + R  +Y     R+
Sbjct: 1336 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEK-VRAVRERLRIAQSRQKSYADNRRRE 1394

Query: 1402 IFF-------LKVALTKGIVRFGRKGKLRLRFIVPFEILERDGDVAYRFVLPLELATIHN 1560
            + F       L+V   +G+ RF  KGKL  RF+ P+ ILER G+VAY+  LP  +  IHN
Sbjct: 1395 LVFQVGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHN 1454

Query: 1561 VFYVSMLR*YIHDPSLVVNHEPLEVNPDMTYKEKSVVILTRKIHKLRNRDITLVKIQWNR 1740
            VF+VS L+  +  P    + + +E+  D+TY EK   IL     K RN+ I   K+QW+ 
Sbjct: 1455 VFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQWSH 1514

Query: 1741 HGKKKS 1758
            H ++++
Sbjct: 1515 HSEEEA 1520



 Score = 25.4 bits (54), Expect(2) = 2e-18
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 1748 KKKATWEREVEI*AKYSELFHQPSK 1822
            +++ATWERE E+ A +  LF   S+
Sbjct: 1517 EEEATWEREDELKATHPHLFASSSE 1541