BLASTX nr result

ID: Rehmannia27_contig00026841 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00026841
         (458 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron sp...   166   6e-45
ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron sp...   159   2e-42

>ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 1054

 Score =  166 bits (420), Expect = 6e-45
 Identities = 95/155 (61%), Positives = 110/155 (70%), Gaps = 3/155 (1%)
 Frame = +3

Query: 3    SHGTDATFKADEDPMHNSKGSVDISQRPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKE 182
            S GTD T K  ED MH +K S DI Q+   G VS  S VKG YLF TT+ +LQPRSLP+E
Sbjct: 783  SPGTDDTSKDPEDLMHTAKDSEDIVQQDSSGYVSLHSAVKGNYLFETTEEELQPRSLPQE 842

Query: 183  TRGFLNTNEQ--NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKA 356
            T+G L+ NEQ  ++ELS   R Q R SSSTT  I  HTGGR S   G+QN +LEPSV+KA
Sbjct: 843  TKGLLSINEQSGHIELSSSLRFQDRTSSSTTTCIQSHTGGRDSSTGGFQNVELEPSVKKA 902

Query: 357  -NERPLAMPSRALQLSNRERLLLRKQALKMKNIPM 458
             +E   AMP RALQLSNRERLLLRKQALKMK +P+
Sbjct: 903  LSEATAAMPFRALQLSNRERLLLRKQALKMKKLPV 937


>ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttata]
            gi|604346236|gb|EYU44699.1| hypothetical protein
            MIMGU_mgv1a000630mg [Erythranthe guttata]
          Length = 1040

 Score =  159 bits (401), Expect = 2e-42
 Identities = 88/155 (56%), Positives = 108/155 (69%), Gaps = 3/155 (1%)
 Frame = +3

Query: 3    SHGTDATFKADEDPMHNSKGSVDISQRPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKE 182
            SH TDAT K  E+PMH S+ +V I+Q+ + GDVS QS VK  YLF TT+A++QP SL  E
Sbjct: 752  SHETDATNKDPEEPMHISEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEAEVQPTSLSNE 811

Query: 183  TRGFLNTNEQ--NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQK- 353
               F + N Q  N+E    PRSQ R +SS + YI P TG R SDG GY+N  +EPS QK 
Sbjct: 812  GNSFSDKNNQIGNMEFVRSPRSQDRRNSSPSTYIRPQTGRRKSDGGGYRNVDIEPSGQKP 871

Query: 354  ANERPLAMPSRALQLSNRERLLLRKQALKMKNIPM 458
              ERP  MPSR++QLSN+ERLLLRKQAL+MK IP+
Sbjct: 872  MKERPSLMPSRSVQLSNKERLLLRKQALRMKKIPI 906


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