BLASTX nr result
ID: Rehmannia27_contig00025841
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00025841
(580 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Eryt... 81 2e-15
ref|XP_011094840.1| PREDICTED: THO complex subunit 4A-like [Sesa... 77 5e-14
ref|XP_006349515.1| PREDICTED: THO complex subunit 4A-like [Sola... 69 6e-11
gb|KRH24827.1| hypothetical protein GLYMA_12G064900 [Glycine max... 65 2e-10
ref|XP_015056383.1| PREDICTED: THO complex subunit 4A-like [Sola... 67 3e-10
ref|XP_009765211.1| PREDICTED: THO complex subunit 4B-like, part... 64 6e-10
gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine ... 66 8e-10
ref|XP_014619530.1| PREDICTED: THO complex subunit 4A-like [Glyc... 66 8e-10
gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine ... 65 1e-09
ref|XP_014620021.1| PREDICTED: THO complex subunit 4A [Glycine max] 65 1e-09
gb|KYP68209.1| RNA and export factor-binding protein 2 [Cajanus ... 65 1e-09
emb|CAJ44457.1| ALY protein [Nicotiana benthamiana] 64 3e-09
ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus c... 64 3e-09
ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isofo... 64 3e-09
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 63 8e-09
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 63 8e-09
ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium... 62 2e-08
gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum] gi|728... 62 2e-08
ref|XP_010558316.1| PREDICTED: THO complex subunit 4B-like [Tare... 62 2e-08
ref|XP_011011762.1| PREDICTED: THO complex subunit 4B-like [Popu... 62 3e-08
>ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Erythranthe guttata]
gi|604342681|gb|EYU41705.1| hypothetical protein
MIMGU_mgv1a013019mg [Erythranthe guttata]
Length = 233
Score = 80.9 bits (198), Expect = 2e-15
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = -3
Query: 536 RNVRVEGRGGAIRRPQGGVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
RNV + G A+RRPQGG RGMRK GRGR EKISAEDLDADL+KYLA AK+TN
Sbjct: 178 RNVPFQASGSAVRRPQGGARGMRKVNGVGRGRAEKISAEDLDADLDKYLAKAKETN 233
>ref|XP_011094840.1| PREDICTED: THO complex subunit 4A-like [Sesamum indicum]
Length = 227
Score = 77.0 bits (188), Expect = 5e-14
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = -3
Query: 536 RNVRVEGRGGAIRRPQGGVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
RN R++ R R P G GMRKD GGRGRGEKISAEDLDADLEKYLA AK+T+
Sbjct: 172 RNARLQRRSNTRRPPPGAASGMRKDHWGGRGRGEKISAEDLDADLEKYLAEAKETS 227
>ref|XP_006349515.1| PREDICTED: THO complex subunit 4A-like [Solanum tuberosum]
Length = 247
Score = 68.9 bits (167), Expect = 6e-11
Identities = 36/55 (65%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = -3
Query: 527 RVEGRGGAIRRPQGGVRG--MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
R + RGG RRP+GG RG MRKD GRGRGE +SAEDLDA+LEKY A A TN
Sbjct: 193 RSQQRGGGFRRPRGGARGGSMRKDGGRGRGRGENVSAEDLDAELEKYHAEAMQTN 247
>gb|KRH24827.1| hypothetical protein GLYMA_12G064900 [Glycine max]
gi|947075988|gb|KRH24828.1| hypothetical protein
GLYMA_12G064900 [Glycine max]
Length = 143
Score = 65.5 bits (158), Expect = 2e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 88 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 143
>ref|XP_015056383.1| PREDICTED: THO complex subunit 4A-like [Solanum pennellii]
Length = 238
Score = 67.0 bits (162), Expect = 3e-10
Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = -3
Query: 527 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
R + RGG RRP+GG RG MRKD GRGRG+ +SAEDLDA+LEKY A A TN
Sbjct: 185 RSQQRGGGFRRPRGGGRGSMRKDGGRGRGRGQNVSAEDLDAELEKYHAEAMQTN 238
>ref|XP_009765211.1| PREDICTED: THO complex subunit 4B-like, partial [Nicotiana
sylvestris]
Length = 143
Score = 64.3 bits (155), Expect = 6e-10
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 527 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
R + RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 90 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 143
>gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 65.9 bits (159), Expect = 8e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_014619530.1| PREDICTED: THO complex subunit 4A-like [Glycine max]
gi|947081040|gb|KRH29829.1| hypothetical protein
GLYMA_11G141500 [Glycine max]
gi|947081041|gb|KRH29830.1| hypothetical protein
GLYMA_11G141500 [Glycine max]
Length = 247
Score = 65.9 bits (159), Expect = 8e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247
>gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 65.5 bits (158), Expect = 1e-09
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_014620021.1| PREDICTED: THO complex subunit 4A [Glycine max]
Length = 247
Score = 65.5 bits (158), Expect = 1e-09
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247
>gb|KYP68209.1| RNA and export factor-binding protein 2 [Cajanus cajan]
Length = 250
Score = 65.5 bits (158), Expect = 1e-09
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 5/55 (9%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDT 372
+GRGGA+RRP G +G+R+DR GG GRGEK+SAEDLDADLEKY + A T
Sbjct: 195 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSAEDLDADLEKYHSEAMQT 249
>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
Length = 246
Score = 64.3 bits (155), Expect = 3e-09
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 527 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
R + RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 193 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 246
>ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 64.3 bits (155), Expect = 3e-09
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Frame = -3
Query: 521 EGRGGAIRRPQGGV---RGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGG +RRP+G RG + R GRGRGEK+SAEDLDADLEKY + A TN
Sbjct: 194 QGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247
>ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nicotiana
tomentosiformis]
Length = 249
Score = 64.3 bits (155), Expect = 3e-09
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 527 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
R + RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 196 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 249
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 63.2 bits (152), Expect = 8e-09
Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRVG-GRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGG RP+GG G+R+ G GRGRGEKISAEDLDADLEKY + A N
Sbjct: 193 QGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKYHSEAMQEN 244
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 63.2 bits (152), Expect = 8e-09
Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRVG-GRGRGEKISAEDLDADLEKYLAGAKDTN 369
+GRGG RP+GG G+R+ G GRGRGEKISAEDLDADLEKY + A N
Sbjct: 194 QGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKYHSEAMQEN 245
>ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium raimondii]
gi|763752760|gb|KJB20148.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752761|gb|KJB20149.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752762|gb|KJB20150.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
Length = 241
Score = 62.0 bits (149), Expect = 2e-08
Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = -3
Query: 518 GRGGAIRRPQG--GVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
GRGG RR +G G RG + R GRGRGEK+SAEDLDADLEKY A TN
Sbjct: 190 GRGGGFRRQRGVAGGRGFGRGRGQGRGRGEKVSAEDLDADLEKYHTEAMQTN 241
>gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum]
gi|728837570|gb|KHG17013.1| THO complex subunit 4
[Gossypium arboreum]
Length = 241
Score = 62.0 bits (149), Expect = 2e-08
Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = -3
Query: 518 GRGGAIRRPQG--GVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 369
GRGG RR +G G RG + R GRGRGEK+SAEDLDADLEKY A TN
Sbjct: 190 GRGGGFRRQRGVAGGRGFGRGRGQGRGRGEKVSAEDLDADLEKYHTEAMQTN 241
>ref|XP_010558316.1| PREDICTED: THO complex subunit 4B-like [Tarenaya hassleriana]
Length = 256
Score = 62.0 bits (149), Expect = 2e-08
Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = -3
Query: 527 RVEGRGGAIRRPQGGVRGMRKDRVGGRGRG--EKISAEDLDADLEKYLAGAKDT 372
R GRGG + RP+GGV G R R GRGRG EKISAEDLDADL+ Y GA +T
Sbjct: 199 RGRGRGGFVGRPRGGVGGGRGGRGRGRGRGRDEKISAEDLDADLDNYHKGAMET 252
>ref|XP_011011762.1| PREDICTED: THO complex subunit 4B-like [Populus euphratica]
Length = 243
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -3
Query: 521 EGRGGAIRRPQGGVRGMRKDRVG-GRGRGEKISAEDLDADLEKY 393
+GRGG RP+GG G+R+ G GRGRGEKISAEDLDADLEKY
Sbjct: 192 QGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKY 235