BLASTX nr result

ID: Rehmannia27_contig00024880 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00024880
         (4605 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240...    58   7e-08
ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240...    54   8e-07
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-...    62   1e-06
ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214...    61   2e-06

>ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240911 isoform X1 [Nicotiana
            sylvestris]
          Length = 282

 Score = 57.8 bits (138), Expect(2) = 7e-08
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
 Frame = -3

Query: 3004 GSFWVCARIIGISDE--WWYI*CTRCTKKLHPALDQFYCIKCDHLQPT-GRIR*YMFF*I 2834
            G++WV A I+ +  +  W Y+ C  C+KKL  A ++FYC KC+ +Q    R    ++F  
Sbjct: 47   GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQSVIHRYDYNLYFLY 106

Query: 2833 NILIINSEIVK*VCYSTF*KSFMNRYMIHLQVADESASATLL*WDRECKQMIGKSCVELR 2654
              +I+  +              ++RY + ++V D + + +LL WD++  ++I KS  +L+
Sbjct: 107  YYMILKIQT-------------LSRYRLQVKVMDCTDTISLLLWDKDGTKIIEKSANDLK 153



 Score = 30.4 bits (67), Expect(2) = 7e-08
 Identities = 12/53 (22%), Positives = 29/53 (54%)
 Frame = -1

Query: 2538 GSSPSVELSADLKAVIGNMMIFKVQIKEEQLRNYAGVFFSVRLTSDQDLVWKY 2380
            G++       +++ ++   ++FKV++     +N   V   +RLT D++++ KY
Sbjct: 161  GAADDSSCPMEIENIVEKRVMFKVEVNSSNNQNKDVVLRVIRLTDDEEIIKKY 213


>ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240911 isoform X2 [Nicotiana
            sylvestris]
          Length = 278

 Score = 54.3 bits (129), Expect(2) = 8e-07
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
 Frame = -3

Query: 3004 GSFWVCARIIGISDE--WWYI*CTRCTKKLHPALDQFYCIKCDHLQPTGRIR*YMFF*IN 2831
            G++WV A I+ +  +  W Y+ C  C+KKL  A ++FYC KC+ +Q              
Sbjct: 47   GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQ-------------- 92

Query: 2830 ILIINSEIVK*VCYSTF*KSFMNRYMIHLQVADESASATLL*WDRECKQMIGKSCVELR 2654
                               S ++RY + ++V D + + +LL WD++  ++I KS  +L+
Sbjct: 93   -------------------SVIHRYRLQVKVMDCTDTISLLLWDKDGTKIIEKSANDLK 132



 Score = 30.4 bits (67), Expect(2) = 8e-07
 Identities = 12/53 (22%), Positives = 29/53 (54%)
 Frame = -1

Query: 2538 GSSPSVELSADLKAVIGNMMIFKVQIKEEQLRNYAGVFFSVRLTSDQDLVWKY 2380
            G++       +++ ++   ++FKV++     +N   V   +RLT D++++ KY
Sbjct: 140  GAADDSSCPMEIENIVEKRVMFKVEVNSSNNQNKDVVLRVIRLTDDEEIIKKY 192


>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
            partial [Nicotiana sylvestris]
          Length = 244

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
 Frame = -3

Query: 3016 TFKLGSFWVCARIIGI--SDEWWYI*CTRCTKKLHPALDQFYCIKCDHLQPTGRIR*YMF 2843
            +F+ G  W+ A ++ +    EW Y+ C +C+KK+     +F+C KCD L           
Sbjct: 15   SFQEGHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRLD---------- 64

Query: 2842 F*INILIINSEIVK*VCYSTF*KSFMNRYMIHLQVADESASATLL*WDRECKQMIGKSCV 2663
                                   S  +RY   +QV D +   +LL WDRE   +IGKS  
Sbjct: 65   ----------------------SSVTHRYKFRVQVMDHTGFISLLLWDREATSLIGKSAN 102

Query: 2662 ELRQEFVE 2639
            EL +  +E
Sbjct: 103  ELNEISIE 110


>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
            sylvestris]
          Length = 213

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
 Frame = -3

Query: 3007 LGSFWVCARIIGISDE--WWYI*CTRCTKKLHPALDQFYCIKCDHLQPTGRIR*YMFF*I 2834
            LG++WV A II +  +  W Y+ C  C+KKL  A ++FYC KC+ +Q             
Sbjct: 85   LGNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQ------------- 131

Query: 2833 NILIINSEIVK*VCYSTF*KSFMNRYMIHLQVADESASATLL*WDRECKQMIGKSCVELR 2654
                                S  +RY + ++V D + + +LL WD++  ++IGKS  +L+
Sbjct: 132  --------------------SVTHRYRLQVKVMDCTGTISLLLWDKDATKIIGKSANDLK 171

Query: 2653 QEFVE 2639
                E
Sbjct: 172  DVVFE 176


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