BLASTX nr result

ID: Rehmannia27_contig00024808 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00024808
         (586 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010245685.1| PREDICTED: uncharacterized protein LOC104589...    61   5e-08

>ref|XP_010245685.1| PREDICTED: uncharacterized protein LOC104589163 [Nelumbo nucifera]
          Length = 263

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
 Frame = -1

Query: 586 TVAVTNPFKVQQFDGKYNFTLWQRSVKDLLVQQDLTIALKEN*GKSADM*DAQWANMDRL 407
           T    + F++++FDGK NFTLW+R VK +LVQQ L  ALK   GK  DM DA W +++  
Sbjct: 3   TKGTGSQFQIERFDGKGNFTLWKRRVKGILVQQGLARALKGKDGKLEDMKDADWEDIESR 62

Query: 406 WK----------IXXXXXXXXXXXXXXTSIVDSY-DTLVPTLLYGKDTLE 290
            K          +                 V  Y  +   TLLYGKDT++
Sbjct: 63  KKLNDKAISEATVIRAEDGRRWESPRILKCVQHYLGSTRETLLYGKDTVK 112


Top