BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00022644
         (1315 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012844594.1| PREDICTED: general transcription factor IIH ...   476   e-163
ref|XP_011090547.1| PREDICTED: general transcription factor IIH ...   457   e-156
ref|XP_010316742.1| PREDICTED: general transcription factor IIH ...   430   e-146
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ...   433   e-146
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ...   430   e-145
gb|EPS66674.1| hypothetical protein M569_08097 [Genlisea aurea]       429   e-144
ref|XP_010316740.1| PREDICTED: general transcription factor IIH ...   430   e-144
ref|XP_009631137.1| PREDICTED: general transcription factor IIH ...   426   e-144
ref|XP_009762927.1| PREDICTED: general transcription factor IIH ...   428   e-144
ref|XP_009596858.1| PREDICTED: general transcription factor IIH ...   426   e-143
ref|XP_009631135.1| PREDICTED: general transcription factor IIH ...   426   e-143
emb|CDP09632.1| unnamed protein product [Coffea canephora]            416   e-139
gb|KVH96938.1| Transcription factor TFIIH subunit p52/Tfb2 [Cyna...   411   e-138
ref|XP_003635508.2| PREDICTED: general transcription factor IIH ...   407   e-136
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   406   e-136
ref|XP_008383755.1| PREDICTED: general transcription factor IIH ...   401   e-135
ref|XP_009338076.1| PREDICTED: general transcription factor IIH ...   404   e-135
ref|XP_009338006.1| PREDICTED: general transcription factor IIH ...   404   e-135
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   403   e-135
ref|XP_008345891.1| PREDICTED: general transcription factor IIH ...   402   e-134

>ref|XP_012844594.1| PREDICTED: general transcription factor IIH subunit 4 [Erythranthe
            guttata] gi|604320464|gb|EYU31406.1| hypothetical protein
            MIMGU_mgv1a006192mg [Erythranthe guttata]
          Length = 453

 Score =  476 bits (1226), Expect = e-163
 Identities = 235/257 (91%), Positives = 248/257 (96%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVARNFMDMVASLPA KLDKLYENSFICEAILRSLPPLAKKYVLQ+LYI+GPV A
Sbjct: 1    MPQVKIVARNFMDMVASLPAFKLDKLYENSFICEAILRSLPPLAKKYVLQMLYIEGPVSA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            KWLEEWVLPDG SKHKVAVDRLIQLR+LTET+ERKKE TYL+N TFQ NLQKHIVHGGVL
Sbjct: 61   KWLEEWVLPDGVSKHKVAVDRLIQLRILTETIERKKETTYLLNPTFQSNLQKHIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPM SNITVRLP+LEDLDAYAVQQWE+FLLHLINSTEAEKSTNISSSMM+IFQRGLL+
Sbjct: 121  PREPMASNITVRLPTLEDLDAYAVQQWEYFLLHLINSTEAEKSTNISSSMMRIFQRGLLN 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            QKDDKEP KLTESGFQFLLMDTNAQLWYI+REYI+NCE+ GVDTADLISFLLELSFHVTG
Sbjct: 181  QKDDKEPAKLTESGFQFLLMDTNAQLWYIIREYITNCEEHGVDTADLISFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYNLNTLSDIQRNI+K
Sbjct: 241  KAYNLNTLSDIQRNILK 257


>ref|XP_011090547.1| PREDICTED: general transcription factor IIH subunit 4 [Sesamum
            indicum]
          Length = 453

 Score =  457 bits (1175), Expect = e-156
 Identities = 228/257 (88%), Positives = 239/257 (92%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQ+KIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPV A
Sbjct: 1    MPQLKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            KWLEEWVL DG SKH+VAVDRLIQLR+LTETVERKKEATYL N TFQRNLQKHI+HGGVL
Sbjct: 61   KWLEEWVLADGISKHRVAVDRLIQLRILTETVERKKEATYLFNPTFQRNLQKHILHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNI  RLPSLEDLDAYAVQQWE FLLHLI+S+EAEKSTNISSSMMK+FQRGLLS
Sbjct: 121  PREPMPSNIIARLPSLEDLDAYAVQQWELFLLHLISSSEAEKSTNISSSMMKVFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYI+NCE   V    +  FLL LSFH+TG
Sbjct: 181  QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYINNCEVSNVQALFVFQFLLXLSFHITG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYNLNTLSDIQR+IIK
Sbjct: 241  KAYNLNTLSDIQRSIIK 257


>ref|XP_010316742.1| PREDICTED: general transcription factor IIH subunit 4 isoform X4
            [Solanum lycopersicum]
          Length = 365

 Score =  430 bits (1106), Expect = e-146
 Identities = 212/257 (82%), Positives = 240/257 (93%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVARNFMDMVASLP MKLD LY+NSFICEAILRSLPPLAKKYVLQ+LYID P+ A
Sbjct: 1    MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKHKVA+DRLIQLRV+TET +RKKEA Y +N  FQ NLQKHIV+GGVL
Sbjct: 61   KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+AYAV+QWE FLL+LI+S+EA K+TNISSSMMKIFQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEAGKTTNISSSMMKIFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+DD+EPP+LTESGFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NT++D+QR+IIK
Sbjct: 241  KAYNTNTITDLQRSIIK 257


>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4 [Solanum
            tuberosum]
          Length = 453

 Score =  433 bits (1113), Expect = e-146
 Identities = 212/257 (82%), Positives = 240/257 (93%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVARNFMDMVASLP MKLD LY+NSFICEAILRSLPPLAKKYVLQ+LYID P+ A
Sbjct: 1    MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKHKVA+DRLIQLRV+TET +RKKEATY +N  FQ NLQKHIVHGG+L
Sbjct: 61   KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEATYQLNPKFQFNLQKHIVHGGIL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+AYAV+QWE FLL+LI+S+E  K+TNISSSMMKIFQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEGGKTTNISSSMMKIFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+DD+EPP+LTESGFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NT++D+QR+IIK
Sbjct: 241  KAYNTNTITDLQRSIIK 257


>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
            [Solanum lycopersicum] gi|970009946|ref|XP_015065870.1|
            PREDICTED: general transcription factor IIH subunit 4
            [Solanum pennellii]
          Length = 453

 Score =  430 bits (1106), Expect = e-145
 Identities = 212/257 (82%), Positives = 240/257 (93%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVARNFMDMVASLP MKLD LY+NSFICEAILRSLPPLAKKYVLQ+LYID P+ A
Sbjct: 1    MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKHKVA+DRLIQLRV+TET +RKKEA Y +N  FQ NLQKHIV+GGVL
Sbjct: 61   KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+AYAV+QWE FLL+LI+S+EA K+TNISSSMMKIFQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEAGKTTNISSSMMKIFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+DD+EPP+LTESGFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NT++D+QR+IIK
Sbjct: 241  KAYNTNTITDLQRSIIK 257


>gb|EPS66674.1| hypothetical protein M569_08097 [Genlisea aurea]
          Length = 452

 Score =  429 bits (1102), Expect = e-144
 Identities = 210/257 (81%), Positives = 232/257 (90%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVA+NFMDMVASLPA+KL+KLYENSFICEAILRSL PLAKKYVLQLLYI+GPVPA
Sbjct: 1    MPQVKIVAKNFMDMVASLPAVKLEKLYENSFICEAILRSLTPLAKKYVLQLLYIEGPVPA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            KW EEWVL DG SKH VA+DRL+QLR+ +ETVERKKE  Y++N  FQ NLQK IVHGGVL
Sbjct: 61   KWFEEWVLRDGVSKHNVAIDRLLQLRIFSETVERKKETNYVMNPKFQHNLQKCIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPM    T RL S  DLDAYA QQWE FLLHL+NS EAE+STN+SSS+MK+FQRGLL+
Sbjct: 121  PREPMLPTATGRLLSPNDLDAYAAQQWESFLLHLMNSAEAERSTNLSSSIMKVFQRGLLT 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            QKDDK+PPKLTESGFQFLLMDTNAQLWYI+REYISNCED GVDTADL+SF+LELSFH TG
Sbjct: 181  QKDDKQPPKLTESGFQFLLMDTNAQLWYIIREYISNCEDRGVDTADLLSFMLELSFHYTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYNLNTLSD+QR+IIK
Sbjct: 241  KAYNLNTLSDVQRDIIK 257


>ref|XP_010316740.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
            [Solanum lycopersicum]
          Length = 499

 Score =  430 bits (1106), Expect = e-144
 Identities = 212/257 (82%), Positives = 240/257 (93%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVARNFMDMVASLP MKLD LY+NSFICEAILRSLPPLAKKYVLQ+LYID P+ A
Sbjct: 1    MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKHKVA+DRLIQLRV+TET +RKKEA Y +N  FQ NLQKHIV+GGVL
Sbjct: 61   KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+AYAV+QWE FLL+LI+S+EA K+TNISSSMMKIFQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEAGKTTNISSSMMKIFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+DD+EPP+LTESGFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NT++D+QR+IIK
Sbjct: 241  KAYNTNTITDLQRSIIK 257


>ref|XP_009631137.1| PREDICTED: general transcription factor IIH subunit 4-like isoform X3
            [Nicotiana tomentosiformis]
          Length = 386

 Score =  426 bits (1095), Expect = e-144
 Identities = 212/257 (82%), Positives = 237/257 (92%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIV RNFMDMVASLPA+KLD LY+NSFICEAILRSLPPLAKKYVL LLYID P+ A
Sbjct: 1    MPQVKIVPRNFMDMVASLPAVKLDMLYDNSFICEAILRSLPPLAKKYVLHLLYIDIPISA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EE VLPDG SKHKVA+DRLIQLRV+TET +RKKEA Y +N  FQ NLQKHIVHGGVL
Sbjct: 61   KSMEESVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+AYAV+QWE FLLHLI+S+EA K+TNISSSMMK+FQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAYAVEQWECFLLHLISSSEAGKTTNISSSMMKVFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+DD+EPP+LTESGFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NTL+DIQR+I K
Sbjct: 241  KAYNTNTLTDIQRSITK 257


>ref|XP_009762927.1| PREDICTED: general transcription factor IIH subunit 4 [Nicotiana
            sylvestris]
          Length = 453

 Score =  428 bits (1101), Expect = e-144
 Identities = 213/257 (82%), Positives = 239/257 (92%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVARNFMDMVASLPA+KLD LY+NSFICEAILRSLPPLAKKYVLQLLYID P+ A
Sbjct: 1    MPQVKIVARNFMDMVASLPAVKLDMLYDNSFICEAILRSLPPLAKKYVLQLLYIDIPISA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EE VLPDG SKHKVA+DRLIQLRV+TET +RKKEA Y +N  FQ NLQKHIVHGGVL
Sbjct: 61   KSMEESVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+AYAV+QWE FLLHLI+S+EA K+TNISSSMMK+FQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAYAVEQWECFLLHLISSSEAGKTTNISSSMMKVFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+D++EPP+LTESGFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDEREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NTL+DIQR+I K
Sbjct: 241  KAYNTNTLTDIQRSITK 257


>ref|XP_009596858.1| PREDICTED: general transcription factor IIH subunit 4-like [Nicotiana
            tomentosiformis]
          Length = 452

 Score =  426 bits (1095), Expect = e-143
 Identities = 211/257 (82%), Positives = 237/257 (92%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVARNFMDMVASL A+KLD LY+NSFICE ILRSLPPLAKKYVLQLLYID P+ A
Sbjct: 1    MPQVKIVARNFMDMVASLLAVKLDMLYDNSFICEVILRSLPPLAKKYVLQLLYIDIPISA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKHKVA+DRLIQLRV+TET +RKKEA Y +N  FQ NLQKHIVHGGVL
Sbjct: 61   KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+A+AV+QWE FLLHLI+S+EA K+TNISSSMMKIFQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAFAVEQWECFLLHLISSSEAGKTTNISSSMMKIFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+DD+EPP+LTE GFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDDREPPRLTECGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NTL+D+QR+I K
Sbjct: 241  KAYNTNTLTDLQRSITK 257


>ref|XP_009631135.1| PREDICTED: general transcription factor IIH subunit 4-like isoform X1
            [Nicotiana tomentosiformis]
          Length = 453

 Score =  426 bits (1095), Expect = e-143
 Identities = 212/257 (82%), Positives = 237/257 (92%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIV RNFMDMVASLPA+KLD LY+NSFICEAILRSLPPLAKKYVL LLYID P+ A
Sbjct: 1    MPQVKIVPRNFMDMVASLPAVKLDMLYDNSFICEAILRSLPPLAKKYVLHLLYIDIPISA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EE VLPDG SKHKVA+DRLIQLRV+TET +RKKEA Y +N  FQ NLQKHIVHGGVL
Sbjct: 61   KSMEESVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLE+L+AYAV+QWE FLLHLI+S+EA K+TNISSSMMK+FQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEELEAYAVEQWECFLLHLISSSEAGKTTNISSSMMKVFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+DD+EPP+LTESGFQFLLMDTNAQLWYI+REYI+N E+ GVD+ADLI+FLLELSFHVTG
Sbjct: 181  QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG 240

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            KAYN NTL+DIQR+I K
Sbjct: 241  KAYNTNTLTDIQRSITK 257


>emb|CDP09632.1| unnamed protein product [Coffea canephora]
          Length = 454

 Score =  416 bits (1068), Expect = e-139
 Identities = 207/258 (80%), Positives = 234/258 (90%), Gaps = 1/258 (0%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKIVA+NFMDMVASLPAMKLDKLY+N+FIC+AILRS+PPLAK+YVLQLL+ID PV  
Sbjct: 1    MPQVKIVAKNFMDMVASLPAMKLDKLYQNAFICQAILRSMPPLAKRYVLQLLFIDAPVTG 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K LEE VL DG SKHKVA+DRL+QLRVLTE ++RKKEATY +N TFQ N+QK IVHGGVL
Sbjct: 61   KMLEESVLADGLSKHKVAIDRLVQLRVLTEALDRKKEATYRMNPTFQMNVQKLIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEK-STNISSSMMKIFQRGLL 1081
            PREPMPS    RLPSLE+LDAYAVQQWE FLLHLI+S+EAEK +TNISSSMMK+FQRGLL
Sbjct: 121  PREPMPSTAGFRLPSLEELDAYAVQQWECFLLHLISSSEAEKATTNISSSMMKVFQRGLL 180

Query: 1082 SQKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVT 1261
            SQKDDKEPP+LTE GFQFLLMDTNAQLWYI+REYI N E+ G+D+ADL+SFLLELSFH T
Sbjct: 181  SQKDDKEPPRLTEGGFQFLLMDTNAQLWYIIREYIGNSEERGLDSADLVSFLLELSFHAT 240

Query: 1262 GKAYNLNTLSDIQRNIIK 1315
            G+AYN+NTLSDIQR II+
Sbjct: 241  GEAYNINTLSDIQRAIIR 258


>gb|KVH96938.1| Transcription factor TFIIH subunit p52/Tfb2 [Cynara cardunculus var.
            scolymus]
          Length = 406

 Score =  411 bits (1056), Expect = e-138
 Identities = 208/258 (80%), Positives = 233/258 (90%), Gaps = 1/258 (0%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQV+I+A+NFMDMVASLPAMKLD+LYEN+FICEAILRSLPPLAKKYVLQLLYID PV A
Sbjct: 1    MPQVRIIAKNFMDMVASLPAMKLDRLYENAFICEAILRSLPPLAKKYVLQLLYIDAPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
              L+EWVL DGA+KH+VAVDRLIQLR+ TETV+RKKEATY +N  FQ NL+KHIVHGGVL
Sbjct: 61   SSLQEWVLVDGATKHRVAVDRLIQLRIFTETVDRKKEATYKLNLMFQMNLRKHIVHGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKST-NISSSMMKIFQRGLL 1081
            PREPM +NITVRLPSLE+LD YA QQWE FLLHLINS E E +T +IS SMMK+FQRGLL
Sbjct: 121  PREPMAANITVRLPSLEELDNYASQQWECFLLHLINSAEVEVTTKSISLSMMKVFQRGLL 180

Query: 1082 SQKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVT 1261
            SQ+D+ E P+LTESGFQFLLMDTNAQLWYIVREYISN ED GVD+ADLISFLLELSFHVT
Sbjct: 181  SQRDN-EGPRLTESGFQFLLMDTNAQLWYIVREYISNSEDRGVDSADLISFLLELSFHVT 239

Query: 1262 GKAYNLNTLSDIQRNIIK 1315
            G+AYN+NTL+DIQR  +K
Sbjct: 240  GEAYNMNTLTDIQRTTVK 257


>ref|XP_003635508.2| PREDICTED: general transcription factor IIH subunit 4 [Vitis
            vinifera]
          Length = 451

 Score =  407 bits (1046), Expect = e-136
 Identities = 201/257 (78%), Positives = 231/257 (89%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKI+A+NFMDMVASLPAMKLD LY N+FICEAILRSLPPLAKKY+LQ+LYID PV A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVL DG SKH+VA+DRLIQLRV TET +RKKE +Y +N TFQ NLQKH+++GGVL
Sbjct: 61   KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSL+DL+AYA+ QWE FLL LI+ST+ EK TN SSSMMK+FQRGLL+
Sbjct: 121  PREPMPSNITVRLPSLDDLEAYALGQWECFLLQLISSTQTEKLTNFSSSMMKVFQRGLLT 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+ +KE P+LTESGFQFLLMDTNAQLWYI+REYISN E+ GVD ADLISFLLELSFHVTG
Sbjct: 181  QR-EKEAPRLTESGFQFLLMDTNAQLWYIMREYISNSEERGVDPADLISFLLELSFHVTG 239

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            +AYN+NTL++ QRN IK
Sbjct: 240  EAYNINTLTEFQRNTIK 256


>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  406 bits (1043), Expect = e-136
 Identities = 200/257 (77%), Positives = 231/257 (89%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKI+A+NFMDMVASLPAMKLD LY N+FICEAILRSLPPLAKKY+LQ+LYID PV A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVL DG SKH+VA+DRLIQLRV TET +RKKE +Y +N TFQ NLQKH+++GGVL
Sbjct: 61   KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSL+DL+AYA+ QWE FLL LI+ST+ EK TN SSS+MK+FQRGLL+
Sbjct: 121  PREPMPSNITVRLPSLDDLEAYALGQWECFLLQLISSTQTEKLTNFSSSLMKVFQRGLLT 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+ +KE P+LTESGFQFLLMDTNAQLWYI+REYISN E+ GVD ADLISFLLELSFHVTG
Sbjct: 181  QR-EKEAPRLTESGFQFLLMDTNAQLWYIMREYISNSEERGVDPADLISFLLELSFHVTG 239

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            +AYN+NTL++ QRN IK
Sbjct: 240  EAYNINTLTEFQRNTIK 256


>ref|XP_008383755.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
            [Malus domestica]
          Length = 325

 Score =  401 bits (1030), Expect = e-135
 Identities = 196/257 (76%), Positives = 234/257 (91%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQV+I+A+NFMDMVA+LPAMKLDKLYEN+F+CEAILRSLPPLAKKYVLQ+L I+ PV A
Sbjct: 1    MPQVRIIAKNFMDMVATLPAMKLDKLYENAFVCEAILRSLPPLAKKYVLQMLSIEVPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKH+VA+DRLIQLR+ TETV+RK+EATY VN  FQ NL+K +VHG VL
Sbjct: 61   KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKREATYTVNPIFQTNLKKLLVHGVVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLEDL+A+A++QWE FLL LINS++ E+ +NISSSMMK FQRGLL 
Sbjct: 121  PREPMPSNITVRLPSLEDLEAFALEQWECFLLQLINSSQIERPSNISSSMMKTFQRGLLC 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+ D+E P+LTESGFQFLL+DTNAQLWYI+REYISN E+ G+D+ADLISFLLELSFHVTG
Sbjct: 181  QR-DREAPRLTESGFQFLLIDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHVTG 239

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            +AYN+NTL++ Q+NI+K
Sbjct: 240  EAYNINTLNERQKNIVK 256


>ref|XP_009338076.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
            [Pyrus x bretschneideri]
          Length = 426

 Score =  404 bits (1039), Expect = e-135
 Identities = 200/257 (77%), Positives = 234/257 (91%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQV+I+A+NFMDMVA+LPAMKLDKLYEN+FICEAILRSLPPLAKKYVLQLL I+ PV A
Sbjct: 1    MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLCIEVPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKH+VA+DRLIQLR+ TETV+RK+E TY +N  FQ NL+K +VHG VL
Sbjct: 61   KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLVHGVVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLEDL A+A++QWE FLL LINS+++E+ +NISSSMMK FQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEDLQAFALEQWECFLLQLINSSQSERPSNISSSMMKTFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+ D+E P+LTESGFQFLLMDTNAQLWYI+REYISN E+ G+D+ADLISFLLELSFHVTG
Sbjct: 181  QR-DREAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHVTG 239

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            +AYN+NTL++ QRNIIK
Sbjct: 240  EAYNINTLNERQRNIIK 256


>ref|XP_009338006.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
            [Pyrus x bretschneideri]
          Length = 454

 Score =  404 bits (1039), Expect = e-135
 Identities = 200/257 (77%), Positives = 234/257 (91%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQV+I+A+NFMDMVA+LPAMKLDKLYEN+FICEAILRSLPPLAKKYVLQLL I+ PV A
Sbjct: 1    MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLCIEVPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKH+VA+DRLIQLR+ TETV+RK+E TY +N  FQ NL+K +VHG VL
Sbjct: 61   KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLVHGVVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLEDL A+A++QWE FLL LINS+++E+ +NISSSMMK FQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEDLQAFALEQWECFLLQLINSSQSERPSNISSSMMKTFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+ D+E P+LTESGFQFLLMDTNAQLWYI+REYISN E+ G+D+ADLISFLLELSFHVTG
Sbjct: 181  QR-DREAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHVTG 239

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            +AYN+NTL++ QRNIIK
Sbjct: 240  EAYNINTLNERQRNIIK 256


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
            [Cucumis sativus] gi|700194015|gb|KGN49219.1|
            hypothetical protein Csa_6G517270 [Cucumis sativus]
          Length = 451

 Score =  403 bits (1036), Expect = e-135
 Identities = 202/257 (78%), Positives = 231/257 (89%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQVKI+A+NFMDMVASLPAMKLD+LYEN+FICEAILRSLPPLAKK+VLQ+LYIDGPV A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SK+KVAVDRLIQLRV  ET +RK+E TY +N TFQ NLQK ++HG VL
Sbjct: 61   KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
             REPMPSNITVRLPSLEDL+AYA+ QWE FLL LINS +AEK +NISSS+MK+FQ+GLLS
Sbjct: 121  AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+ DKE P+LTESGFQFLLM+TNAQLWYI+REYISN E+ GVD ADLISFLLELSFHVTG
Sbjct: 181  QR-DKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTG 239

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            +AY+++TLSD QR  IK
Sbjct: 240  EAYDIDTLSDEQRYAIK 256


>ref|XP_008345891.1| PREDICTED: general transcription factor IIH subunit 4-like [Malus
            domestica]
          Length = 454

 Score =  402 bits (1033), Expect = e-134
 Identities = 198/257 (77%), Positives = 234/257 (91%)
 Frame = +2

Query: 545  MPQVKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVPA 724
            MPQV+I+A+NFMDMVA+LPAMKLDKLYEN+FICEAILRSLPPLAKKYVLQLL I+ PV A
Sbjct: 1    MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLCIEVPVTA 60

Query: 725  KWLEEWVLPDGASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHGGVL 904
            K +EEWVLPDG SKH+VA+DRLIQLR+ TETV+RK+E TY +N  FQ NL+K +VHG VL
Sbjct: 61   KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLVHGVVL 120

Query: 905  PREPMPSNITVRLPSLEDLDAYAVQQWEFFLLHLINSTEAEKSTNISSSMMKIFQRGLLS 1084
            PREPMPSNITVRLPSLEDL A+A++QWE FLL LINS+++E+ +NISSSMMK FQRGLLS
Sbjct: 121  PREPMPSNITVRLPSLEDLQAFALEQWECFLLQLINSSQSERPSNISSSMMKTFQRGLLS 180

Query: 1085 QKDDKEPPKLTESGFQFLLMDTNAQLWYIVREYISNCEDLGVDTADLISFLLELSFHVTG 1264
            Q+ D+E P+LT+SGFQFLLMDTNAQLWYI+REYISN E+ G+D+ADLISFLLELSFHVTG
Sbjct: 181  QR-DREAPRLTDSGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHVTG 239

Query: 1265 KAYNLNTLSDIQRNIIK 1315
            +AYN+NTL++ Q+NIIK
Sbjct: 240  EAYNINTLNERQKNIIK 256