BLASTX nr result

ID: Rehmannia27_contig00021174 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00021174
         (528 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087927.1| PREDICTED: RING-H2 finger protein ATL52-like...    99   3e-21
ref|XP_002522602.1| PREDICTED: RING-H2 finger protein ATL54 [Ric...    62   4e-08
ref|XP_012069169.1| PREDICTED: RING-H2 finger protein ATL52-like...    59   4e-07
ref|XP_007042886.1| RING/U-box superfamily protein, putative [Th...    58   6e-07
emb|CDO97409.1| unnamed protein product [Coffea canephora]             57   1e-06
ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...    55   9e-06

>ref|XP_011087927.1| PREDICTED: RING-H2 finger protein ATL52-like [Sesamum indicum]
          Length = 492

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 23/139 (16%)
 Frame = +3

Query: 3   IEDD-TVSRAENGPKINE----EEGNSDTGGLDGIHPLRRSISMDYLSV----------F 137
           IED  + S AE G K+NE    +EGN D  GLDG+ P+RRS+S+D LS           F
Sbjct: 354 IEDHGSASLAETGLKMNENLGEDEGNRDRQGLDGVQPMRRSVSVDSLSASMISAAVANAF 413

Query: 138 PGQSDGN----LVEVKESSTHGVVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIKRSVS 305
            GQ + N    +VE+KE  T GV+ KR GFNQ LLRL+GSP I RS+ QTG  S+KRS+S
Sbjct: 414 SGQPNSNSGKQIVELKEP-TVGVIAKRAGFNQSLLRLVGSPSIGRST-QTGDSSLKRSLS 471

Query: 306 CSANV----HSSTNQN*VI 350
           CSA +     SS ++N V+
Sbjct: 472 CSAKLLLSRDSSRHRNSVV 490


>ref|XP_002522602.1| PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis]
           gi|223538078|gb|EEF39689.1| ring finger protein,
           putative [Ricinus communis]
          Length = 378

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 14/123 (11%)
 Frame = +3

Query: 3   IEDDTVSRAENGPKINEEEGNSDTGGLDGIHPLRRSISMDYLSVF----------PGQSD 152
           IE++     EN  K +E     +    +GI P+RRS+S+D LS F          P +SD
Sbjct: 250 IEEEREVEDENTRKRSEFLNGEE----EGIQPIRRSVSLDSLSAFKISQALVSVCPVESD 305

Query: 153 GN----LVEVKESSTHGVVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIKRSVSCSANV 320
            N    LV   ESS   +V KRVG NQ LL+ + S  I R S+Q G  SIKRS+SC   +
Sbjct: 306 RNSRTGLVNESESSME-IVPKRVGSNQSLLKFMASSSIGR-SLQIGPSSIKRSLSCGGKL 363

Query: 321 HSS 329
             S
Sbjct: 364 FLS 366


>ref|XP_012069169.1| PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
           gi|643734091|gb|KDP40934.1| hypothetical protein
           JCGZ_24933 [Jatropha curcas]
          Length = 379

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
 Frame = +3

Query: 3   IED-DTVSRAENGPKINEEEGNSDT---------GGLDGIHPLRRSISMDYLSVF----- 137
           IED D   R+       EEE N +          G  DG+ P+RRS+S+D LS F     
Sbjct: 237 IEDVDGELRSRTDQDEEEEEVNGENRRNRVEDLNGEKDGLQPIRRSVSLDSLSAFKISQG 296

Query: 138 -----PGQSDGN--LVEVKES-STHGVVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIK 293
                  QSD N     VK+S S+ G+V+KR   NQ L R + S  I R S+Q G  S+K
Sbjct: 297 LAIVDQIQSDRNSRTEHVKQSESSMGIVSKRFSGNQSLSRFMASSSIAR-SLQIGPSSLK 355

Query: 294 RSVSCSANVHSS 329
           RS+SC   +  S
Sbjct: 356 RSISCGGKLFLS 367


>ref|XP_007042886.1| RING/U-box superfamily protein, putative [Theobroma cacao]
           gi|508706821|gb|EOX98717.1| RING/U-box superfamily
           protein, putative [Theobroma cacao]
          Length = 383

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
 Frame = +3

Query: 48  NEEEGNSDTGGLDGIHPLRRSISMDYLSV----------FP----GQSDGNLVEVKESST 185
           NE +    +G  DGI P+RRS+S+D L+           FP    G SD  L + KESS 
Sbjct: 262 NERKTGESSGVEDGIQPMRRSVSLDSLAASQISHAIANGFPEGSSGNSDNELAKGKESSV 321

Query: 186 HGVVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIKRSVSCS 311
             +VT+R   NQGLLRL+    + R S+Q+    +KRS SC+
Sbjct: 322 R-IVTRRTAGNQGLLRLMCHSSMGR-SLQSRPIFMKRSFSCN 361


>emb|CDO97409.1| unnamed protein product [Coffea canephora]
          Length = 412

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 47/128 (36%), Positives = 60/128 (46%), Gaps = 19/128 (14%)
 Frame = +3

Query: 3   IEDDTVSRAENG------PKINEEEGNSDTGGLDGIHPLRRSISMDYLS----------V 134
           +E++  SR   G          E+ GNS     +GI PLRRS+SMD LS           
Sbjct: 274 VEEEDESRVGTGNASRRNENFMEDVGNSGAREEEGIQPLRRSVSMDSLSAFKVSAAIANA 333

Query: 135 FPGQSDGNLVEVK---ESSTHGVVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIKRSVS 305
           FP Q D N          S+ G+  K  G  Q L R  G   +ERSS Q  + ++KRS+S
Sbjct: 334 FPPQCDRNSDNKNMQMNGSSMGLAPKGAGNEQCLSRSEGCSSVERSS-QKETSAVKRSLS 392

Query: 306 CSANVHSS 329
           CSA V  S
Sbjct: 393 CSARVFLS 400


>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 13/93 (13%)
 Frame = +3

Query: 81  LDGIHPLRRSISMDYLS----------VFPGQSDGN---LVEVKESSTHGVVTKRVGFNQ 221
           +D I P+RRS+SMD LS          V P +S+GN    +   + S   +V KRVG NQ
Sbjct: 273 VDEIQPMRRSVSMDSLSASMISLALANVHPQKSNGNSDSQLANSKKSIMPIVPKRVGGNQ 332

Query: 222 GLLRLIGSPLIERSSIQTGSCSIKRSVSCSANV 320
            L++L+ S  + R  +Q+GS S+KRS SCS  +
Sbjct: 333 SLVKLMESSSMGR-ILQSGSTSMKRSFSCSGKL 364


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