BLASTX nr result

ID: Rehmannia27_contig00021020 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00021020
         (362 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotei...    62   6e-09
ref|XP_011100917.1| PREDICTED: uncharacterized protein LOC105179...    57   1e-07

>ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Sesamum indicum]
          Length = 472

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 26/32 (81%), Positives = 32/32 (100%)
 Frame = +3

Query: 267 LSGYNLEPFNGKTDFSIWQQKMKGILIQQKVY 362
           ++GY+L+PF+GKTDFSIWQQKMKGILIQQKV+
Sbjct: 1   MAGYSLQPFDGKTDFSIWQQKMKGILIQQKVF 32


>ref|XP_011100917.1| PREDICTED: uncharacterized protein LOC105179028 [Sesamum indicum]
          Length = 188

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = +3

Query: 267 LSGYNLEPFNGKTDFSIWQQKMKGILIQQKVY 362
           + GY+L+ F+GK+DFSIWQQKMKGILIQQKV+
Sbjct: 1   MDGYSLQSFDGKSDFSIWQQKMKGILIQQKVF 32


Top