BLASTX nr result
ID: Rehmannia27_contig00018359
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00018359
(5274 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 280 e-131
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] 286 e-130
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 297 e-127
dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group] 302 e-127
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 318 e-127
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 301 e-127
ref|XP_008341155.1| PREDICTED: uncharacterized protein LOC103404... 296 e-126
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 334 e-126
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo... 300 e-126
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo... 300 e-126
ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420... 280 e-126
emb|CCH50966.1| T4.5 [Malus x robusta] 293 e-125
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 319 e-125
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 298 e-125
gb|AAB82754.1| retrofit [Oryza longistaminata] 298 e-125
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 300 e-124
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 302 e-124
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 283 e-124
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo... 336 e-124
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 296 e-123
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 280 bits (716), Expect(3) = e-131
Identities = 150/323 (46%), Positives = 203/323 (62%), Gaps = 4/323 (1%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQH--VCKL 1277
VKP TIR+VL++AV++ W I+ +D+NNAFL G+L+E +YM QP G++ + + VCKL
Sbjct: 832 VKPTTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKL 891
Query: 1276 VKAIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGD 1097
KA+YGLKQAP++W DKLK L GF + SD LF + S VTG
Sbjct: 892 HKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGS 951
Query: 1096 SPSLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHG-LLLNQHKYILDLLKKTNLSSC 923
S + ++ + L+ +FSLK EV ++ G L L+Q KYI DLLKKT +
Sbjct: 952 SSQEIHELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGA 1011
Query: 922 NPCVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTT 743
TP KL DN YRS VGALQY+T+TR +I++ VNK+ QF+ +P
Sbjct: 1012 KSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLD 1071
Query: 742 SHWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNL 563
+HW A KR+LRYL GT+ LG++ PS ++L F DADW S +DD+RSTSG+CVFLG +L
Sbjct: 1072 THWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSL 1131
Query: 562 IAWSSKKQNVVARSSTETEYSPL 494
++WSSKKQ+ +RSSTE EY L
Sbjct: 1132 VSWSSKKQHTTSRSSTEAEYRSL 1154
Score = 137 bits (346), Expect(3) = e-131
Identities = 64/115 (55%), Positives = 82/115 (71%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPF 1617
H M+TRSK GIFKP ++ LN EP+T EA+SHPKWKEA D E+ AL+KN TW LV
Sbjct: 722 HHMVTRSKNGIFKPXVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSL 781
Query: 1616 SPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
+ V + VF++K P+G V R+KA LVAKG+ Q+PG D+++TFSPVVKP T
Sbjct: 782 PTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTT 836
Score = 105 bits (263), Expect(3) = e-131
Identities = 44/102 (43%), Positives = 76/102 (74%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA+ T++++W++SL +EL + V+WCDNIS +SL++NPV H+RTKH+E+D++++
Sbjct: 1152 RSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYFV 1211
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 198
REKV +++ + ++P+E+Q+ADV KPL F L K ++
Sbjct: 1212 REKVMERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTV 1253
Score = 143 bits (361), Expect = 1e-30
Identities = 65/142 (45%), Positives = 92/142 (64%)
Frame = -1
Query: 2679 SVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWGGEY 2500
S +GF YY+ F D ++ YTW+Y L++K +T F A F K++ FQ DWGGE+
Sbjct: 390 SSYGFTYYVSFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEF 449
Query: 2499 RPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSS 2320
R + +Y G+ R CP+T +QNG ERKH+HIV++GLTLLA + LP K+W D+F ++
Sbjct: 450 RSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTA 509
Query: 2319 VFTINRLPTPTLQNISHFQKLF 2254
VF INRLPT L+ ++ LF
Sbjct: 510 VFLINRLPTEVLKQKCPYEFLF 531
Score = 116 bits (291), Expect = 2e-22
Identities = 78/222 (35%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Frame = -1
Query: 3564 RPSCQICGKNNHIASKCFKRFDVNFVG-IDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQ 3388
+P CQ+C K H +CF R+D NF G + + + N + NV+
Sbjct: 180 KPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLT 239
Query: 3387 SHFTQAAGN--SFDSMNSAEVDAN---WYVDSGATTHVTADLNNLSIHSLYKGNDKLTIG 3223
+ Q + ++M + D W+ DSGAT HVT DL NL+ + Y GN K+ +G
Sbjct: 240 EYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMG 299
Query: 3222 NGSSLRISHIDSAIL-SSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDY 3046
NG+ L+ISHI ++ SS +K L N+L VP I KN LS+SQ RDNNV+ EF+
Sbjct: 300 NGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNXLSVSQFXRDNNVYFEFHP-- 357
Query: 3045 CFVKDKMTHQMLLRGSLKDGLYCLDLSN------SGCSTSKA 2938
+G+L GLY +LS SG S S A
Sbjct: 358 -------------KGNLHKGLYQFNLSKKLFGKASGLSLSNA 386
Score = 95.1 bits (235), Expect = 7e-16
Identities = 44/97 (45%), Positives = 63/97 (64%)
Frame = -2
Query: 2330 LFLLCLLSTDYLHPLSKTYLIFKNFLAKFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKC 2151
+FL+ L T+ L +F + K +Y+ LKVFGC CFP+LRPYN HK FRSS C
Sbjct: 510 VFLINRLPTEVLKQKCPYEFLFNS---KPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPC 566
Query: 2150 VFIGYSPFHKGYRCLGPSGKIYIASTMSFNEDEFRYS 2040
F+GYS HKGY+CL G+++I+ ++ F+E F ++
Sbjct: 567 TFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFA 603
>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
Length = 1074
Score = 286 bits (733), Expect(3) = e-130
Identities = 154/324 (47%), Positives = 201/324 (62%), Gaps = 3/324 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VKP TIRLVLS+AV+ W I+ +D++NAFL GDL+E ++M QP G+ED S P HVC+L K
Sbjct: 630 VKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDSSCPTHVCRLQK 689
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQ P++W KL LL +GFQ S ++ LF+ + +TG +P
Sbjct: 690 ALYGLKQGPRAWFHKLSSFLLQIGFQCSRANASLFYFHSASDIIILLIYVDDILITGSNP 749
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
S V Q+ + L F+L+ +V SH L LNQ YI LL++ NL
Sbjct: 750 SRVHQIISQLSSHFALRDLGDISYFLGIKVTRLSHALHLNQQHYIHQLLERANLHEAKSA 809
Query: 913 VTPHCISQKLFLKDSPLFD--NATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP + + L D +AT YRS VGALQY+TLTR +IS+ VN+ Q++ PTTS
Sbjct: 810 STPGALGKLLSAADGEPLSVLDATHYRSLVGALQYITLTRPEISFAVNRACQYMARPTTS 869
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
H A KR+LRYLKGT+ G+ SP L LQ ++D DWAS DDKRSTSG+C+F NLI
Sbjct: 870 HLQAAKRILRYLKGTATHGISIHASPSLSLQGYTDVDWASCPDDKRSTSGFCLFFCTNLI 929
Query: 559 AWSSKKQNVVARSSTETEYSPLPL 488
+WSS KQ VV+RSS E+EY L L
Sbjct: 930 SWSSTKQRVVSRSSAESEYWALAL 953
Score = 133 bits (335), Expect(3) = e-130
Identities = 67/115 (58%), Positives = 82/115 (71%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPF 1617
HPMITRSK GI K KT+ L T EP TV + L P WK A + EY AL+KN TW LVP
Sbjct: 521 HPMITRSKSGICKKKTYLTSL-TIEPRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPP 579
Query: 1616 SPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
+ KI+ K VF++K++PNG +DR+KA LVA+GF Q GID+F+TFSPVVKP T
Sbjct: 580 PSNAKIIRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCT 634
Score = 100 bits (250), Expect(3) = e-130
Identities = 46/105 (43%), Positives = 71/105 (67%)
Frame = -2
Query: 500 SLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYIR 321
+LA ++ W++ L EL ++WCDNISA +LA+N VFHAR+KHIE+D H++R
Sbjct: 950 ALALLVAEVSWVQFLLKELCIPQQDTPLIWCDNISATALAANSVFHARSKHIEIDFHFVR 1009
Query: 320 EKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPP 186
+KV +KE+ I+Y+PS +QLA+V K +PS +F ++ S+ P
Sbjct: 1010 DKVLHKELLIQYVPSTDQLANVFTKHVPSCQFSAARTRLSVVPRP 1054
Score = 82.8 bits (203), Expect(2) = 2e-22
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGP-SGKIYIASTMS 2067
DY KVFGC C+P+L+ N++KFQ RS+ C+F+GY+P HKGY CL P + ++YI+ +
Sbjct: 370 DYFHFKVFGCLCYPHLKHLNSNKFQPRSTPCIFLGYAPSHKGYLCLNPTTNRVYISRHVV 429
Query: 2066 FNEDEFRYSSLFSISPLSQLLIHL 1995
F E F + +L SP SQ H+
Sbjct: 430 FAETTFPFQAL---SPPSQQSYHI 450
Score = 55.1 bits (131), Expect(2) = 2e-22
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -1
Query: 2433 QQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSSVFTINRLPTPTLQNISHFQKLF 2254
+QNG+ E K +H+V+ GLTLL + LP KFW +F ++V IN +P+P L S F L+
Sbjct: 306 EQNGRVECKMRHVVETGLTLLYTATLPSKFWPYAFTTTVTLINCMPSPLLNYSSPFSLLY 365
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 297 bits (761), Expect(3) = e-127
Identities = 158/324 (48%), Positives = 205/324 (63%), Gaps = 3/324 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VKP TIRLVLS+AV+ W I+ +D++NAFL GDL+E ++M QP G+ED S P HVC+L K
Sbjct: 884 VKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDNSCPTHVCRLQK 943
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W KL LL +GFQ S +D LF+ + +TG +P
Sbjct: 944 ALYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYFHSASDIIILLIYVDDILITGSNP 1003
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
S V Q+ + L F+L+ EV SH L LNQ +YI LL++ NL
Sbjct: 1004 SRVHQIISQLSSHFALRDLGDISYFLGIEVTRRSHALHLNQQRYIHQLLERANLHEAKSA 1063
Query: 913 VTPHCISQKLFLKDSPLFD--NATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP + + L D +AT YRS VGALQY+TLTR +IS+ VN+ Q++ PTTS
Sbjct: 1064 STPGALGKLLSAADGEPLSALDATHYRSLVGALQYITLTRPEISFAVNRACQYMARPTTS 1123
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
H A KR+LRYLKGT+ G+ SP L LQ ++DADWAS DD+RSTSG+C+F G NLI
Sbjct: 1124 HLQAAKRILRYLKGTATHGISIHASPSLSLQGYTDADWASCPDDRRSTSGFCLFFGTNLI 1183
Query: 559 AWSSKKQNVVARSSTETEYSPLPL 488
+WSS KQ VV+RSS E+EY L L
Sbjct: 1184 SWSSTKQRVVSRSSAESEYRALAL 1207
Score = 135 bits (341), Expect(3) = e-127
Identities = 68/115 (59%), Positives = 83/115 (72%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPF 1617
HPMITRSK GI K KT+ L T EP TV +AL P WK A + EY AL+KN TW LVP
Sbjct: 775 HPMITRSKSGICKKKTYLTSL-TIEPRTVKQALQDPNWKVAMEQEYQALLKNQTWSLVPP 833
Query: 1616 SPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
+ KI+ K VF++K++PNG +DR+KA LVA+GF Q GID+F+TFSPVVKP T
Sbjct: 834 PSNAKIIGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCT 888
Score = 77.8 bits (190), Expect(3) = e-127
Identities = 39/106 (36%), Positives = 60/106 (56%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
++LA ++ W++ L EL ++WCDNISA +LA+N VFHAR+KHIE+D+H++
Sbjct: 1203 RALALLAAEVSWVQFLLKELCIPQQDTPLIWCDNISATALAANSVFHARSKHIEIDLHFV 1262
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPP 186
R+K LADV K +PS +F ++ S+ P
Sbjct: 1263 RDK----------------LADVFTKHVPSCQFSAARTRLSVVPRP 1292
Score = 192 bits (489), Expect(2) = 1e-62
Identities = 128/439 (29%), Positives = 190/439 (43%), Gaps = 1/439 (0%)
Frame = -1
Query: 3567 NRPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQ 3388
NRP CQ+CGK H+ C+ RFDVN+ G AP+ +S +
Sbjct: 287 NRPQCQLCGKFGHMVLSCYHRFDVNYQG------------------PRAPASSTSQIGL- 327
Query: 3387 SHFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSL 3208
T A + +SA +D+ W++DSGAT H++ N+ + Y G D + +G
Sbjct: 328 ---TPPAQAMMAAPSSASMDS-WFLDSGATHHLSHTAANIHNGTPYNGTDSVMVGK---- 379
Query: 3207 RISHIDSAILSSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDK 3028
+S+ DNN +EF+ FVKDK
Sbjct: 380 -----------------------------------CVSKFCTDNNTILEFHPSSFFVKDK 404
Query: 3027 MTHQMLLRGSLKDGLYCLDLSNSGCSTSKAL*SISVFLSLNNDVN-LWHKRLGHCSPSVV 2851
T LL+G L+ GLY S S+ A VFL+ LWH+R GH S ++
Sbjct: 405 DTKVTLLQGQLERGLY--KFPTSSISSPTASPKHQVFLTKTQPTTMLWHQRFGHPSGVIL 462
Query: 2850 SNVLKQLKVSVDLSALNSCDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAHTPSVH 2671
+ ++ +WGPA PS
Sbjct: 463 QKIF------------------------------------------HTYLWGPAPVPSST 480
Query: 2670 GFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWGGEYRPI 2491
G +Y++ +DD++ + W Y L +K + S QF LV F + I+ Q + GGE+ +
Sbjct: 481 GARYFLLLMDDYSRFVWFYLLPTKDQVHSTFVQFKTLVENQFQTTIKCLQTBHGGEFIAL 540
Query: 2490 SSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSSVFT 2311
+L G+ R CPYT +QNG+ ERK +H+V+ GLTLL + LP KFW +F ++V
Sbjct: 541 XKFLSLHGILHRFSCPYTPEQNGRVERKMRHVVETGLTLLYTATLPSKFWXYAFTTAVTL 600
Query: 2310 INRLPTPTLQNISHFQKLF 2254
IN +P+P L S F L+
Sbjct: 601 INCMPSPLLNYSSPFSLLY 619
Score = 79.7 bits (195), Expect(2) = 1e-62
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGP-SGKIYIASTMS 2067
DY KVFGC C+P+L+ N++KFQ RS+ C+F+GY+P HKGY CL P + ++YI+ +
Sbjct: 624 DYFHFKVFGCLCYPHLKHLNSNKFQPRSTPCIFLGYAPSHKGYLCLNPTTNRVYISRHVV 683
Query: 2066 FNEDEFRYSSL 2034
F E F + +L
Sbjct: 684 FAETTFPFQAL 694
>dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]
Length = 821
Score = 302 bits (774), Expect(3) = e-127
Identities = 157/322 (48%), Positives = 203/322 (63%), Gaps = 3/322 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VK TIR+VLSLAV+RGW ++ +D+ NAFL+G L+E +YM QP GYE S P +VCKL K
Sbjct: 392 VKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDK 451
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W +L L LGF S +D LFF ++G + P
Sbjct: 452 ALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVP 511
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
+ L K F+LK EVH GL+L+Q KY DLL++ + C P
Sbjct: 512 DATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPV 571
Query: 913 VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP S+KL + + L ++T YRS VGALQYLTLTR DIS+ +NK+ QFLH PTT+
Sbjct: 572 STPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTT 631
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
HW A KR+LRY+K T GL F +P L + FSDADWA + DD+RST G+ VFLGPNL+
Sbjct: 632 HWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLV 691
Query: 559 AWSSKKQNVVARSSTETEYSPL 494
+WS++KQ V+RSSTE EY L
Sbjct: 692 SWSARKQATVSRSSTEAEYKAL 713
Score = 107 bits (266), Expect(3) = e-127
Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
Frame = -2
Query: 1784 TRSKLGIFKPKTFSA-------ILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDL 1626
TR + GI K K ++ ++ EP ++ EA+++ WKEA DAEY ALI+N TW L
Sbjct: 279 TRLQSGIRKEKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIENKTWHL 338
Query: 1625 VPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
VP ++D K V++VK + +G +DR+KA LVAKGF+Q GIDY DTFSPVVK T
Sbjct: 339 VPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 396
Score = 101 bits (251), Expect(3) = e-127
Identities = 43/103 (41%), Positives = 72/103 (69%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
++LA AT +++W+++L ELG + + LWCDN+ A L++NP+FHARTKHIEVD H++
Sbjct: 711 KALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFV 770
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQ 195
RE+V K +EI Y+ +++Q+AD K +P + + + +L+
Sbjct: 771 RERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNLE 813
Score = 87.4 bits (215), Expect(2) = 6e-16
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = -2
Query: 2258 FLAKFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLG-PSGKIYI 2082
F K +Y L++FGCA +P LRPYN HK FRS +CVF+GYS HKG++CL +G++Y+
Sbjct: 35 FKEKPNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYV 94
Query: 2081 ASTMSFNEDEFRYSSLFS 2028
+ ++F+E F +S L S
Sbjct: 95 SRDVTFDESIFPFSELHS 112
Score = 28.5 bits (62), Expect(2) = 6e-16
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -1
Query: 2358 LPYKFWWDSFVSSVFTINRLPTPTLQNISHFQKLF 2254
+P KFW ++ +++ + INR P+ + ++LF
Sbjct: 1 MPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLF 35
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 290 bits (743), Expect(3) = e-127
Identities = 161/326 (49%), Positives = 204/326 (62%), Gaps = 5/326 (1%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
+KP+T+RL+L+LA+T W IQ +D+NNAFL G L+E +YM QP G+E K VCKL K
Sbjct: 981 IKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDK-NLVCKLHK 1039
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
AIYGLKQAP++W DKLK LL L F S D LF QG + +TG++
Sbjct: 1040 AIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNS 1099
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHG-LLLNQHKYILDLLKKTNLSSCNP 917
S++ + + L +FSLK EV S G L+L Q KYI DLL +T++ P
Sbjct: 1100 SILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKP 1159
Query: 916 CVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSH 737
+P KL S F +A+LYRS VGALQY T+TR +IS+ VNK+ QF+ P T H
Sbjct: 1160 ISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHH 1219
Query: 736 WGACKRVLRYLKGTSHLGLMFSP---SPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPN 566
W A KR+LRYLKGT+ GL P S L + ++ DADWAS DD+RSTSG +FLGPN
Sbjct: 1220 WAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPN 1279
Query: 565 LIAWSSKKQNVVARSSTETEYSPLPL 488
L++W SKKQ VVARSSTE EY L L
Sbjct: 1280 LVSWWSKKQTVVARSSTEAEYRSLAL 1305
Score = 124 bits (312), Expect(3) = e-127
Identities = 62/116 (53%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTS-EPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVP 1620
HPM TR+K GI KP+ +L T EP T +ALS+P W A EY+AL+ N+TW LVP
Sbjct: 870 HPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVP 929
Query: 1619 FSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
P + K VFRVK PNG V ++KA LVAKGF Q G DY +TFSPV+KP+T
Sbjct: 930 LPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVT 985
Score = 94.7 bits (234), Expect(3) = e-127
Identities = 47/106 (44%), Positives = 73/106 (68%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA ATT++ WI++L +EL + +++CDN+S ++LA NPV HARTKH+E+D+ ++
Sbjct: 1301 RSLALATTEVTWIQTLLSELKVT-HSTPIIFCDNLSTVALAHNPVLHARTKHMELDLFFV 1359
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPP 186
REKV K +++ ++P+ +Q ADVL K L RF L SK + P
Sbjct: 1360 REKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQVVESP 1405
Score = 318 bits (815), Expect(2) = e-108
Identities = 171/444 (38%), Positives = 255/444 (57%), Gaps = 10/444 (2%)
Frame = -1
Query: 3555 CQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQSHFT 3376
CQ+C + H+AS C+ RFD +V + AP+Y S+N H
Sbjct: 300 CQVCHRYGHVASACYYRFDETYV---------------PSSPLEAPAYPSNN----QHTN 340
Query: 3375 QAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSLRISH 3196
A N+ NWY DSGA+ HVT N+ + ++G D++ +GNG L I+
Sbjct: 341 PGACNN-----------NWYPDSGASNHVTNVSQNIHQFTPFEGPDQIHVGNGQGLHINS 389
Query: 3195 IDSAILSSPLISK-PFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDKMTH 3019
SP+ K F L+N+L+VP I+KNL+S+SQ ++DN+V+ EF+ C VK + T+
Sbjct: 390 TGVTTFHSPINPKFQFALNNLLFVPSITKNLISVSQFSKDNSVYFEFHPHICLVKSQDTN 449
Query: 3018 QMLLRGSL-KDGLYCLDLSNSGCSTSKA-------L*SISVFLSLNNDVNLWHKRLGHCS 2863
++LL+GS+ DGLY ST + S++ + WH RLGH +
Sbjct: 450 EVLLQGSVGSDGLYKFPALLPNPSTQSVQQQQLARIFSVNTAATSPVSFATWHSRLGHPN 509
Query: 2862 PSVVSNVLKQLKVS-VDLSALNSCDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAH 2686
V+ +V + + V + N C C +GK H P S++ PF L+YSD+WGPA
Sbjct: 510 VDVMKHVSRNYNIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAP 569
Query: 2685 TPSVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWGG 2506
S G++YY+ F+D T +TWIY L+SK +T ++ KQF A+V ++ I+A Q DWGG
Sbjct: 570 VTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGG 629
Query: 2505 EYRPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFV 2326
EYR ++YL +G+Q R CP+TH QNG +ERKH+HIV++GLTL+A + LP +FW SF+
Sbjct: 630 EYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFL 689
Query: 2325 SSVFTINRLPTPTLQNISHFQKLF 2254
++V+ INRLP+ ++QN + KLF
Sbjct: 690 TAVYLINRLPSSSIQNAVPYHKLF 713
Score = 107 bits (267), Expect(2) = e-108
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 2064
DY L++FGC+CFP+LRPYN HK QFRS +CVF+GYS HKGY+CL G++YI+ + F
Sbjct: 718 DYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVF 777
Query: 2063 NEDEFRYSSLFSISPLS 2013
NE +F Y LFS S S
Sbjct: 778 NETKFPYKDLFSSSKAS 794
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 290 bits (743), Expect(3) = e-127
Identities = 161/326 (49%), Positives = 204/326 (62%), Gaps = 5/326 (1%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
+KP+T+RL+L+LA+T W IQ +D+NNAFL G L+E +YM QP G+E K VCKL K
Sbjct: 646 IKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDK-NLVCKLHK 704
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
AIYGLKQAP++W DKLK LL L F S D LF QG + +TG++
Sbjct: 705 AIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNS 764
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHG-LLLNQHKYILDLLKKTNLSSCNP 917
S++ + + L +FSLK EV S G L+L Q KYI DLL +T++ P
Sbjct: 765 SILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKP 824
Query: 916 CVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSH 737
+P KL S F +A+LYRS VGALQY T+TR +IS+ VNK+ QF+ P T H
Sbjct: 825 ISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHH 884
Query: 736 WGACKRVLRYLKGTSHLGLMFSP---SPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPN 566
W A KR+LRYLKGT+ GL P S L + ++ DADWAS DD+RSTSG +FLGPN
Sbjct: 885 WAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPN 944
Query: 565 LIAWSSKKQNVVARSSTETEYSPLPL 488
L++W SKKQ VVARSSTE EY L L
Sbjct: 945 LVSWWSKKQTVVARSSTEAEYRSLAL 970
Score = 124 bits (312), Expect(3) = e-127
Identities = 62/116 (53%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTS-EPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVP 1620
HPM TR+K GI KP+ +L T EP T +ALS+P W A EY+AL+ N+TW LVP
Sbjct: 535 HPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVP 594
Query: 1619 FSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
P + K VFRVK PNG V ++KA LVAKGF Q G DY +TFSPV+KP+T
Sbjct: 595 LPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVT 650
Score = 94.7 bits (234), Expect(3) = e-127
Identities = 47/106 (44%), Positives = 73/106 (68%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA ATT++ WI++L +EL + +++CDN+S ++LA NPV HARTKH+E+D+ ++
Sbjct: 966 RSLALATTEVTWIQTLLSELKVT-HSTPIIFCDNLSTVALAHNPVLHARTKHMELDLFFV 1024
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPP 186
REKV K +++ ++P+ +Q ADVL K L RF L SK + P
Sbjct: 1025 REKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQVVESP 1070
Score = 301 bits (770), Expect(2) = e-103
Identities = 153/374 (40%), Positives = 231/374 (61%), Gaps = 10/374 (2%)
Frame = -1
Query: 3345 NSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSLRISHIDSAILSSPL 3166
+S+ + NWY DSGA+ HVT N+ + ++G D++ +GNG L I+ SP+
Sbjct: 5 SSSSSNNNWYPDSGASNHVTNVSQNIHQFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPI 64
Query: 3165 ISK-PFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDKMTHQMLLRGSL-K 2992
K F L+N+L+VP I+KNL+S+SQ ++DN+V+ EF+ C VK + T+++LL+GS+
Sbjct: 65 NPKFQFALNNLLFVPSITKNLISVSQFSKDNSVYFEFHPHICLVKSQDTNEVLLQGSVGS 124
Query: 2991 DGLYCLDLSNSGCSTSKA-------L*SISVFLSLNNDVNLWHKRLGHCSPSVVSNVLKQ 2833
DGLY ST + S++ + WH RLGH + V+ +V +
Sbjct: 125 DGLYKFPALLPNPSTQSVQQQQLARIFSVNTAATSPVSFATWHSRLGHPNVDVMKHVSRN 184
Query: 2832 LKVS-VDLSALNSCDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAHTPSVHGFKYY 2656
+ V + N C C +GK H P S++ PF L+YSD+WGPA S G++YY
Sbjct: 185 YNIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYY 244
Query: 2655 IHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWGGEYRPISSYLL 2476
+ F+D T +TWIY L+SK +T ++ KQF A+V ++ I+A Q DWGGEYR ++YL
Sbjct: 245 VTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLN 304
Query: 2475 SLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSSVFTINRLP 2296
+G+Q R CP+TH QNG +ERKH+HIV++GLTL+A + LP +FW SF+++V+ INRLP
Sbjct: 305 EVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLP 364
Query: 2295 TPTLQNISHFQKLF 2254
+ ++QN + KLF
Sbjct: 365 SSSIQNAVPYHKLF 378
Score = 107 bits (267), Expect(2) = e-103
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 2064
DY L++FGC+CFP+LRPYN HK QFRS +CVF+GYS HKGY+CL G++YI+ + F
Sbjct: 383 DYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVF 442
Query: 2063 NEDEFRYSSLFSISPLS 2013
NE +F Y LFS S S
Sbjct: 443 NETKFPYKDLFSSSKAS 459
>ref|XP_008341155.1| PREDICTED: uncharacterized protein LOC103404078 [Malus domestica]
Length = 986
Score = 296 bits (757), Expect(3) = e-126
Identities = 159/319 (49%), Positives = 210/319 (65%), Gaps = 1/319 (0%)
Frame = -3
Query: 1447 KPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVKA 1268
KP TI ++LS+AV+ W + +D++NAFL+G LKE +YM QP G+ D SKP HVCKL ++
Sbjct: 254 KPTTIHILLSIAVSYDWFVHQLDVSNAFLHGTLKEDVYMVQPPGFVDQSKPTHVCKLQRS 313
Query: 1267 IYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSPS 1088
+YGLKQAP++W D +LSLGF S SD LF ++ ++ +TG S +
Sbjct: 314 LYGLKQAPRAWYDAFHKAILSLGFSSSHSDSSLFIKKD-STITFILVYVDDIIITGSSTT 372
Query: 1087 LVQQVFANLQKVFSLKH-XXXXXXXXLEVHSSSHGLLLNQHKYILDLLKKTNLSSCNPCV 911
+ Q + LQ +F +K +EVH S+ GL L+Q KY +DLLKK+++ PC
Sbjct: 373 VCQSIITQLQAMFPVKDLGDIHYFLGIEVHRSAKGLFLHQSKYAIDLLKKSDMLGVKPCS 432
Query: 910 TPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSHWG 731
TP S KL SPL D + YRSTVGALQYLT TR D+++ VN++ Q +H P T H
Sbjct: 433 TP-VGSAKLDHSGSPLSD-PSFYRSTVGALQYLTWTRPDLAFAVNQVCQHMHSPRTVHLQ 490
Query: 730 ACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIAWS 551
A KR+LRYLKGT H GL + P+ +L ++SDADWA + D+RSTSGYCVFLGPNLI+WS
Sbjct: 491 AVKRILRYLKGTLHFGLWLTKGPQ-YLTAWSDADWAGCLVDRRSTSGYCVFLGPNLISWS 549
Query: 550 SKKQNVVARSSTETEYSPL 494
+KKQ VARSSTE EY L
Sbjct: 550 AKKQCXVARSSTEAEYRSL 568
Score = 112 bits (279), Expect(3) = e-126
Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 12/126 (9%)
Frame = -2
Query: 1793 PMITRSKLGIFKPKTFSAILNT------------SEPSTVMEALSHPKWKEARDAEYSAL 1650
PMITR+K GI KPK F+A ++ S P+T ++A +P W +A E+ AL
Sbjct: 132 PMITRAKAGIHKPKVFTATKHSLPASVDSIACLPSTPTTFLQASKNPNWMQAMKDEFQAL 191
Query: 1649 IKNHTWDLVPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSP 1470
TW LVPF + +V K VFR+K++P+G ++R+KA LVAKGF Q G+D+ +TFSP
Sbjct: 192 KSTGTWXLVPFQSHLNLVGCKWVFRLKHKPDGSIERYKARLVAKGFHQQEGLDFSETFSP 251
Query: 1469 VVKPIT 1452
KP T
Sbjct: 252 XAKPTT 257
Score = 99.0 bits (245), Expect(3) = e-126
Identities = 49/102 (48%), Positives = 67/102 (65%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA +L W+ + +L F L + ++CDN SAI+LA NPVFHARTKH+E+D HYI
Sbjct: 566 RSLAHTAAELSWVCQVLQDLSFPLLKTPAIFCDNKSAIALAFNPVFHARTKHVEIDYHYI 625
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 198
EKV +V + ++ S Q+AD+ K LPS RF L SK S+
Sbjct: 626 XEKVLCGKVSVHHVASLLQIADIFTKSLPSDRFAXLASKLSI 667
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 281 bits (720), Expect(3) = e-126
Identities = 150/320 (46%), Positives = 199/320 (62%), Gaps = 1/320 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VKP T+R+V ++A++R W I+ +D+NNAFL GDL+E ++M QP G+ D P VC+L K
Sbjct: 1022 VKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHK 1081
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W +KL LLS GF + SD LF + V G
Sbjct: 1082 ALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDT 1141
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
+ + + A L FSLK +V +++GL L+Q KYI DLL+KT + C P
Sbjct: 1142 AAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPA 1201
Query: 913 VTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSHW 734
TP KL + D ++ YRSTVGALQY+T+TR ++S+ VNK+ QF+ PT HW
Sbjct: 1202 RTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHW 1261
Query: 733 GACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIAW 554
KR+LRYL+GT GL S L L F DADWAS +DD+RSTSG+CVFLGPNLI+W
Sbjct: 1262 KVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISW 1321
Query: 553 SSKKQNVVARSSTETEYSPL 494
SKKQ++V+RSS E EY L
Sbjct: 1322 QSKKQHIVSRSSIEIEYRSL 1341
Score = 117 bits (293), Expect(3) = e-126
Identities = 60/115 (52%), Positives = 76/115 (66%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPF 1617
HPMITR+K GI KPK F A + EPS+V AL +WK+A AEY AL +N+TW LVP
Sbjct: 914 HPMITRAKSGIVKPKIFIAAIR--EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPL 971
Query: 1616 SPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
+ + K V++ K P+G V ++KA LVAKGF Q G D+ +TFSPVVKP T
Sbjct: 972 PAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPST 1026
Score = 107 bits (266), Expect(3) = e-126
Identities = 47/93 (50%), Positives = 71/93 (76%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA ++ W++SL +EL L + ++WCDN+S + L++NPV HARTKHIE+D++++
Sbjct: 1339 RSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFV 1398
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRF 225
REKV KEVE+R++PS +QLADVL K + S +F
Sbjct: 1399 REKVIRKEVEVRHVPSADQLADVLTKTVSSTQF 1431
Score = 334 bits (856), Expect = 6e-90
Identities = 181/454 (39%), Positives = 264/454 (58%), Gaps = 14/454 (3%)
Frame = -1
Query: 3564 RPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQS 3385
+P+CQ+CGK H+ ++C+ RFD F S++ +SS ++ S
Sbjct: 307 KPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSR-----------------NSSPRAYYS 349
Query: 3384 HFTQAAGNSFDSMNSAEV--DANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSS 3211
Q G + ++EV D NWY DSGA+ HVT + NL + + G +++ +GNG+
Sbjct: 350 FSPQVNG----VIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTG 405
Query: 3210 LRISHIDSAILSSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKD 3031
L I HI + SP SKP LL+++L+VP I+KNLLS+S+ +DN VF EF+SD CFVKD
Sbjct: 406 LSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKD 465
Query: 3030 KMTHQMLLRGSLKDGLYCLD-----------LSNSGCSTSKAL*SISVFLSLNNDVNLWH 2884
++T +L+ G ++DGLY D LS S + + S SL++ +LWH
Sbjct: 466 QVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWH 525
Query: 2883 KRLGHCSPSVVSNVLKQLKVS-VDLSALNSCDACKVGKLHAHPFPQSKSQTTAPFQLIYS 2707
KRLGH S + + NVL + V+ ++ N C +C +GK+H PF S + T P +LI+
Sbjct: 526 KRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHL 585
Query: 2706 DVWGPAHTPSVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQA 2527
D+WGP S G++YYIHF+D F+ ++WI+ L++K E + F V F+ KI++
Sbjct: 586 DLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKS 645
Query: 2526 FQCDWGGEYRPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYK 2347
Q DWGGE+R SYL G+ R CP+T QQNG +ERKH+ IV+ GLTLL + LP K
Sbjct: 646 LQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLK 705
Query: 2346 FWWDSFVSSVFTINRLPTPTLQNISHFQKLFGKI 2245
FW +SF + V+ NRLPT L + + LF I
Sbjct: 706 FWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSI 739
Score = 107 bits (266), Expect = 2e-19
Identities = 49/103 (47%), Positives = 67/103 (65%)
Frame = -2
Query: 2330 LFLLCLLSTDYLHPLSKTYLIFKNFLAKFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKC 2151
++L L T LH ++FK+ DY+FLKVFGC+CFP LRPYN HK Q+RS +C
Sbjct: 715 VYLSNRLPTAILHHKCPIEVLFKSIP---DYSFLKVFGCSCFPNLRPYNTHKLQYRSEEC 771
Query: 2150 VFIGYSPFHKGYRCLGPSGKIYIASTMSFNEDEFRYSSLFSIS 2022
F+GYS HKGY+C+ +G++YI+ + FNE F YS +S
Sbjct: 772 TFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVS 814
>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 283 bits (725), Expect(3) = e-126
Identities = 158/321 (49%), Positives = 199/321 (61%), Gaps = 5/321 (1%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
+KPITIR++L+LAVT W +Q ID+NNAFL G L+E +YMTQP G+E K VCKL K
Sbjct: 997 IKPITIRIILTLAVTFKWSVQQIDVNNAFLNGILQEEVYMTQPAGFEASDKSL-VCKLHK 1055
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
++YGLKQAP++W D+L LL LGF S D L Q + +TG +P
Sbjct: 1056 SLYGLKQAPRAWYDRLTQALLQLGFVKSKCDPSLLIHTQNGACTYVLIYVDDILITGSAP 1115
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHG-LLLNQHKYILDLLKKTNLSSCNP 917
L+ + L F+LK EVH G LLLNQ KYI DLL K ++ P
Sbjct: 1116 HLISDLIHKLNMKFALKQLGQIDYFLGIEVHHLPSGALLLNQTKYIRDLLCKAHMEDSAP 1175
Query: 916 CVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSH 737
+P S +L S + TLYRS VGALQY TLTR DI++ VNK+ QF+ P SH
Sbjct: 1176 IGSPMVSSCRLSKYGSDTMTDPTLYRSIVGALQYATLTRPDIAFSVNKVCQFMAHPLESH 1235
Query: 736 WGACKRVLRYLKGTSHLGLMFSPSPR---LHLQSFSDADWASAIDDKRSTSGYCVFLGPN 566
W A KR+LRYL GT GL+ +PSP L+++SDADWA+ DD+RSTSG C++ GPN
Sbjct: 1236 WKAVKRILRYLNGTLSHGLLLTPSPTSPPFSLRAYSDADWATDQDDRRSTSGSCIYFGPN 1295
Query: 565 LIAWSSKKQNVVARSSTETEY 503
LI+W SKKQ +VARSSTE EY
Sbjct: 1296 LISWGSKKQQLVARSSTEAEY 1316
Score = 124 bits (310), Expect(3) = e-126
Identities = 63/115 (54%), Positives = 76/115 (66%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPF 1617
HPMITR+K G KPK F A L EP +V AL+ P W +A AEY AL+ N TW LVP
Sbjct: 890 HPMITRAKTGNLKPKVFVAAL---EPKSVKSALNDPAWLQAMQAEYKALMDNQTWTLVPL 946
Query: 1616 SPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
K + K +FRVK P+G V++FKA LVAKGF Q G D+ +TFSPV+KPIT
Sbjct: 947 PQHRKAIGCKWIFRVKENPDGTVNKFKARLVAKGFLQTAGFDFTETFSPVIKPIT 1001
Score = 98.6 bits (244), Expect(3) = e-126
Identities = 45/102 (44%), Positives = 73/102 (71%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+S+A T DL+WI+SL EL ++L CDN+SA+SL+ NP+ H++TKHIE+D+H++
Sbjct: 1317 RSMANTTADLLWIQSLLRELQVPFLTPTLL-CDNLSAVSLSHNPILHSKTKHIELDIHFV 1375
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 198
REKV +K++ I ++P+++QLAD L KPL + + +K +
Sbjct: 1376 REKVLSKQLNILHVPAQDQLADPLTKPLSPSQHTAIRTKLKV 1417
Score = 300 bits (768), Expect(2) = e-104
Identities = 178/456 (39%), Positives = 247/456 (54%), Gaps = 27/456 (5%)
Frame = -1
Query: 3570 RNRPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSF 3391
+ + CQIC K NH A C+ R+D + + S N P Y
Sbjct: 256 QGKVKCQICAKPNHDAINCWYRYDPQAMNQNSRGGYQVGPSNRPQNFNP---YMRPTAHL 312
Query: 3390 QSHFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSS 3211
A N N A WY DSGA+ H+T + NNLS S Y G D++ +GNG
Sbjct: 313 AMPQPYAMPNMDQFSNGA-----WYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQG 367
Query: 3210 LRISHIDSAILSSPLISKP---FLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCF 3040
+ I + + SP ++P L ++L+VP ISKNLLS+S+ +DNNV EF+ +CF
Sbjct: 368 VSIHSLGQSQFHSP--NEPNVKLTLKDLLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCF 425
Query: 3039 VKDKMTHQMLLRGSL-KDGLYCLD----LSNSGC---STSKAL*SISVFLSLNNDVN--- 2893
VK + + Q+LL G++ DGLY L+NSG S S ++ S S F NN VN
Sbjct: 426 VKYQDSKQVLLEGTVGADGLYQFKPFKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNN 485
Query: 2892 ------------LWHKRLGHCSPSVVSNVLKQLKVSV-DLSALNSCDACKVGKLHAHPFP 2752
+WH RLGH S V N+L + + +A C C +GK H P
Sbjct: 486 TVSVMQNGNVFQMWHLRLGHAHTSAVKNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSP 545
Query: 2751 QSKSQTTAPFQLIYSDVWGPAHTPSVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQ 2572
S + T PF++I+ D+WGPA S +G+ YYI F+D +T +TWIY L++K + L Q
Sbjct: 546 LSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQ 605
Query: 2571 FVALVNTHFNSKIQAFQCDWGGEYRPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIV 2392
F AL+ F + I+A Q DWGGE+R ++ L LG+Q R CP+T QNG ERKH+HIV
Sbjct: 606 FKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTVERKHRHIV 665
Query: 2391 DMGLTLLANSGLPYKFWWDSFVSSVFTINRLPTPTL 2284
+MGLTLL+++ LP KFW SF +V+ INRLP+ +
Sbjct: 666 EMGLTLLSHAALPLKFWDHSFTQAVYLINRLPSSAI 701
Score = 110 bits (275), Expect(2) = e-104
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 2064
DY+ +KVFGC CFP+LRPYNNHK Q+RSS CV++G SP HKG++CL +G+IYI+ + F
Sbjct: 717 DYSQIKVFGCLCFPHLRPYNNHKLQYRSSPCVYLGVSPQHKGHKCLDATGRIYISKDVIF 776
Query: 2063 NEDEFRYSSLFSISPLSQLLIHLLPFQL 1980
+E +F Y SLF+ S + + H P Q+
Sbjct: 777 HESQFPYLSLFASSSSNSHMSHTYPAQI 804
>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 283 bits (725), Expect(3) = e-126
Identities = 158/321 (49%), Positives = 199/321 (61%), Gaps = 5/321 (1%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
+KPITIR++L+LAVT W +Q ID+NNAFL G L+E +YMTQP G+E K VCKL K
Sbjct: 997 IKPITIRIILTLAVTFKWSVQQIDVNNAFLNGILQEEVYMTQPAGFEASDKSL-VCKLHK 1055
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
++YGLKQAP++W D+L LL LGF S D L Q + +TG +P
Sbjct: 1056 SLYGLKQAPRAWYDRLTQALLQLGFVKSKCDPSLLIHTQNGACTYVLIYVDDILITGSAP 1115
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHG-LLLNQHKYILDLLKKTNLSSCNP 917
L+ + L F+LK EVH G LLLNQ KYI DLL K ++ P
Sbjct: 1116 HLISDLIHKLNMKFALKQLGQIDYFLGIEVHHLPSGALLLNQTKYIRDLLCKAHMEDSAP 1175
Query: 916 CVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSH 737
+P S +L S + TLYRS VGALQY TLTR DI++ VNK+ QF+ P SH
Sbjct: 1176 IGSPMVSSCRLSKYGSDTMTDPTLYRSIVGALQYATLTRPDIAFSVNKVCQFMAHPLESH 1235
Query: 736 WGACKRVLRYLKGTSHLGLMFSPSPR---LHLQSFSDADWASAIDDKRSTSGYCVFLGPN 566
W A KR+LRYL GT GL+ +PSP L+++SDADWA+ DD+RSTSG C++ GPN
Sbjct: 1236 WKAVKRILRYLNGTLSHGLLLTPSPTSPPFSLRAYSDADWATDQDDRRSTSGSCIYFGPN 1295
Query: 565 LIAWSSKKQNVVARSSTETEY 503
LI+W SKKQ +VARSSTE EY
Sbjct: 1296 LISWGSKKQQLVARSSTEAEY 1316
Score = 124 bits (310), Expect(3) = e-126
Identities = 63/115 (54%), Positives = 76/115 (66%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPF 1617
HPMITR+K G KPK F A L EP +V AL+ P W +A AEY AL+ N TW LVP
Sbjct: 890 HPMITRAKTGNLKPKVFVAAL---EPKSVKSALNDPAWLQAMQAEYKALMDNQTWTLVPL 946
Query: 1616 SPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
K + K +FRVK P+G V++FKA LVAKGF Q G D+ +TFSPV+KPIT
Sbjct: 947 PQHRKAIGCKWIFRVKENPDGTVNKFKARLVAKGFLQTAGFDFTETFSPVIKPIT 1001
Score = 98.6 bits (244), Expect(3) = e-126
Identities = 45/102 (44%), Positives = 73/102 (71%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+S+A T DL+WI+SL EL ++L CDN+SA+SL+ NP+ H++TKHIE+D+H++
Sbjct: 1317 RSMANTTADLLWIQSLLRELQVPFLTPTLL-CDNLSAVSLSHNPILHSKTKHIELDIHFV 1375
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 198
REKV +K++ I ++P+++QLAD L KPL + + +K +
Sbjct: 1376 REKVLSKQLNILHVPAQDQLADPLTKPLSPSQHTAIRTKLKV 1417
Score = 300 bits (767), Expect(2) = e-103
Identities = 178/456 (39%), Positives = 247/456 (54%), Gaps = 27/456 (5%)
Frame = -1
Query: 3570 RNRPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSF 3391
+ + CQIC K NH A C+ R+D + + S N P Y
Sbjct: 256 QGKVKCQICAKPNHDAINCWYRYDPQAMNQNSRGGYQVGPSNRPQNFNP---YMRPTAHL 312
Query: 3390 QSHFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSS 3211
A N N A WY DSGA+ H+T + NNLS S Y G D++ +GNG
Sbjct: 313 AMPQPYAMPNMDQFSNGA-----WYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQG 367
Query: 3210 LRISHIDSAILSSPLISKP---FLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCF 3040
+ I + + SP ++P L ++L+VP ISKNLLS+S+ +DNNV EF+ +CF
Sbjct: 368 VSIHSLGQSQFHSP--NEPNVKLTLKDLLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCF 425
Query: 3039 VKDKMTHQMLLRGSL-KDGLYCLD----LSNSGC---STSKAL*SISVFLSLNNDVN--- 2893
VK + + Q+LL G++ DGLY L+NSG S S ++ S S F NN VN
Sbjct: 426 VKYQDSKQVLLEGTVGADGLYQFKPFKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNN 485
Query: 2892 ------------LWHKRLGHCSPSVVSNVLKQLKVSV-DLSALNSCDACKVGKLHAHPFP 2752
+WH RLGH S V N+L + + +A C C +GK H P
Sbjct: 486 TVSVMQNGNVFQMWHLRLGHAHTSAVKNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSP 545
Query: 2751 QSKSQTTAPFQLIYSDVWGPAHTPSVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQ 2572
S + T PF++I+ D+WGPA S +G+ YYI F+D +T +TWIY L++K + L Q
Sbjct: 546 LSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQ 605
Query: 2571 FVALVNTHFNSKIQAFQCDWGGEYRPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIV 2392
F AL+ F + I+A Q DWGGE+R ++ L LG+Q R CP+T QNG ERKH+HIV
Sbjct: 606 FKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTVERKHRHIV 665
Query: 2391 DMGLTLLANSGLPYKFWWDSFVSSVFTINRLPTPTL 2284
+MGLTLL+++ LP KFW SF +V+ INRLP+ +
Sbjct: 666 EMGLTLLSHADLPLKFWDHSFTQAVYLINRLPSSAI 701
Score = 109 bits (272), Expect(2) = e-103
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 2064
DY+ +KVFGC CFP+LRPYNNHK Q++SS CV++G SP HKG++CL +G+IYI+ + F
Sbjct: 717 DYSQIKVFGCLCFPHLRPYNNHKLQYKSSPCVYLGVSPQHKGHKCLDATGRIYISKDVIF 776
Query: 2063 NEDEFRYSSLFSISPLSQLLIHLLPFQL 1980
+E +F Y SLF+ S + + H P Q+
Sbjct: 777 HESQFPYLSLFASSSSNSHMSHTYPAQI 804
>ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
Length = 1312
Score = 280 bits (717), Expect(3) = e-126
Identities = 157/319 (49%), Positives = 197/319 (61%), Gaps = 1/319 (0%)
Frame = -3
Query: 1447 KPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVKA 1268
KP TIR++LSLAV W + +DI+NAFL+GDL+E +YM QP G+ D + P HVCKL K+
Sbjct: 879 KPXTIRILLSLAVQHDWFLNQLDISNAFLHGDLQEDVYMQQPPGFSDPTYPHHVCKLRKS 938
Query: 1267 IYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSPS 1088
+YGLKQAP++W +KL L SLGF S SD LF Q G VTG + +
Sbjct: 939 LYGLKQAPRAWFEKLFAVLKSLGFHQSQSDASLFVLQDGV-PVIVLVYVDDILVTGPNTA 997
Query: 1087 LVQQVFANLQKVFSLKH-XXXXXXXXLEVHSSSHGLLLNQHKYILDLLKKTNLSSCNPCV 911
Q+ L VF +K LEV S+ GL L+Q KYI DLL KT ++ PC+
Sbjct: 998 ACQRFIQKLSTVFPVKDLGPLHYFLGLEVQRSADGLFLHQSKYISDLLHKTRMAGAKPCL 1057
Query: 910 TPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSHWG 731
TP + PL + T YRS VGALQYLT TR D+S+ VN++ QF+H P H
Sbjct: 1058 TP--LGSHKLDHTGPLLHDPTEYRSIVGALQYLTWTRPDLSFAVNQVCQFMHAPREPHLQ 1115
Query: 730 ACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIAWS 551
A KR+LR+LK T GL F +HL ++SDADWA D+RSTSGYC+FLG NLI+WS
Sbjct: 1116 AAKRILRFLKATVSHGLWFKKG-TVHLTAYSDADWAGCPFDRRSTSGYCIFLGSNLISWS 1174
Query: 550 SKKQNVVARSSTETEYSPL 494
+KKQ VARSSTE EY L
Sbjct: 1175 AKKQPTVARSSTEAEYRSL 1193
Score = 116 bits (291), Expect(3) = e-126
Identities = 61/121 (50%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSE------PSTVMEALSHPKWKEARDAEYSALIKNHT 1635
HPMITRSK GI KPK +SA + P+T ++A H W+ A E +AL T
Sbjct: 762 HPMITRSKAGISKPKAYSATKHPLPDTVXIIPTTYLQASKHIHWRSAMQDEINALQSTGT 821
Query: 1634 WDLVPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPI 1455
W L PF+ IV K VFRVK P+G +DR+KA LVAKGF Q G+DY +TFSPV KP
Sbjct: 822 WSLXPFTSQQNIVGCKWVFRVKKHPDGTIDRYKARLVAKGFHQQAGLDYXETFSPVAKPX 881
Query: 1454 T 1452
T
Sbjct: 882 T 882
Score = 107 bits (267), Expect(3) = e-126
Identities = 55/102 (53%), Positives = 69/102 (67%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA ++ WI +F +LG L Q LWCDN+SAISLASNPVFHARTKHIE+D HYI
Sbjct: 1191 RSLAHTAAEITWICKVFKDLGLHLPQVPSLWCDNLSAISLASNPVFHARTKHIELDYHYI 1250
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 198
RE V ++++Y+ S QLAD+ K L RF L SK +L
Sbjct: 1251 RELVLANLLKVQYVCSHVQLADIHTKSLSKSRFLYLQSKLAL 1292
Score = 203 bits (517), Expect = 4e-49
Identities = 122/355 (34%), Positives = 185/355 (52%), Gaps = 2/355 (0%)
Frame = -1
Query: 3567 NRPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQ 3388
++ SCQICG +H A CF R + G K +P + +
Sbjct: 330 HKTSCQICGSTSHEALDCFDRMNPEISG------------------KFSP---AKLAAMC 368
Query: 3387 SHFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSL 3208
+H+T + NS W +DSGAT+H+T D++N+ + Y G DK+ IG+G L
Sbjct: 369 AHYTAKSSNS------------WLIDSGATSHITNDISNIQSPTPYHGEDKVYIGDGKGL 416
Query: 3207 RISHIDSAILSSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDK 3028
I HI ++IL +P S F LHN+L+VP++ +LLS Q +DN+ + + VKD+
Sbjct: 417 SIDHIGTSILHTPAHS--FKLHNVLHVPQMQHSLLSAYQFIKDNBCSLTLDINGSSVKDR 474
Query: 3027 MTHQMLLRGSLKDGLYCLDLSNSGCSTSKAL*SISVFLSLNNDVNLWHKRLGHCSPSVVS 2848
T + LLRG +KDG + L S + + S S + +S +V +WH RLGH S ++
Sbjct: 475 FTGRTLLRGQVKDGFFPLHGSPALSTVSH---SPTALVSTAANVRIWHSRLGHPSSAIFR 531
Query: 2847 NVLKQLKVSV--DLSALNSCDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAHTPSV 2674
VL KV V S C C + K H PF +S +TA +L++ DVWGP+ SV
Sbjct: 532 KVLSTNKVVVHGTSSLAFFCKDCALAKNHKLPFGSPQSVSTASLELLHCDVWGPSPVVSV 591
Query: 2673 HGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWG 2509
G++YY+ +DD++ Y+W +PL+SK SI F + V +KI+ + D G
Sbjct: 592 SGYRYYLLIVDDYSKYSWYFPLKSKSSVFSIFVDFKSYVENAIGNKIKVVRSDSG 646
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 293 bits (749), Expect(3) = e-125
Identities = 160/319 (50%), Positives = 205/319 (64%), Gaps = 1/319 (0%)
Frame = -3
Query: 1447 KPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVKA 1268
KP TIR++LS+AV+ W I +D++NAFL+G LKE +YM QP G+ D SKP HVCKL K+
Sbjct: 1235 KPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRKS 1294
Query: 1267 IYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSPS 1088
+YGLKQAP++W + +LSLGF S SD LF ++ S +TG S +
Sbjct: 1295 LYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLFIKRD-TSITFILVYVDDIIITGSSVT 1353
Query: 1087 LVQQVFANLQKVFSLKH-XXXXXXXXLEVHSSSHGLLLNQHKYILDLLKKTNLSSCNPCV 911
Q + + LQ +F +K +EVH S GLLL+Q KY LDLLKKT++ PC
Sbjct: 1354 ECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDMLGAKPCA 1413
Query: 910 TPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSHWG 731
TP +S L + T YRSTVGALQYLT TR D+++ VN++ Q++H P T H
Sbjct: 1414 TP--VSTSKLDHSGTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMHSPQTIHLQ 1471
Query: 730 ACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIAWS 551
A KR+LRYLKGT LGL F+ + L ++SDADWA D+RSTSGYCVFLG NLI+WS
Sbjct: 1472 AVKRILRYLKGTVDLGLWFTKGSQC-LTAWSDADWAGCPVDRRSTSGYCVFLGSNLISWS 1530
Query: 550 SKKQNVVARSSTETEYSPL 494
+KKQ VARSSTE EY L
Sbjct: 1531 AKKQATVARSSTEAEYRSL 1549
Score = 106 bits (264), Expect(3) = e-125
Identities = 57/127 (44%), Positives = 74/127 (58%), Gaps = 12/127 (9%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNT------------SEPSTVMEALSHPKWKEARDAEYSA 1653
H MITR+K GI KPK F+A + PST ++A W EA E+ A
Sbjct: 1112 HTMITRAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQA 1171
Query: 1652 LIKNHTWDLVPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFS 1473
L TW+LVP IV K VF+VK++P+G ++R+KA LVAKGF Q G+D+ +TFS
Sbjct: 1172 LQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFS 1231
Query: 1472 PVVKPIT 1452
PV KP T
Sbjct: 1232 PVAKPTT 1238
Score = 105 bits (261), Expect(3) = e-125
Identities = 51/118 (43%), Positives = 77/118 (65%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA ++ W+ + ++ F L + V++CDN S I+LA NPVFHARTKH+E+D HYI
Sbjct: 1547 RSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHVEIDYHYI 1606
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPPGLV*GACISVIS 150
REKV + ++++ S Q+AD+ KPL + RF L SK S+++P + G S+IS
Sbjct: 1607 REKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALTSKLSVRSPSFSLRGCVKSIIS 1664
Score = 243 bits (620), Expect(2) = 6e-79
Identities = 138/383 (36%), Positives = 225/383 (58%), Gaps = 5/383 (1%)
Frame = -1
Query: 3387 SHFTQAAG-NSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSS 3211
S F Q+ + +M S+ + W DSGA+ HVT D + L+ Y GND+L +G+G
Sbjct: 568 SQFAQSQSPTAMSAMTSSASPSYWLTDSGASHHVTPDPSALNSAIPYSGNDQLFVGDGKG 627
Query: 3210 LRISHIDSAILSSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKD 3031
L ISH SA++ + + F L+++L VP+ S NLLS+ + DN ++ F +VKD
Sbjct: 628 LCISHTGSALIRTKHAT--FRLNDVLLVPQASHNLLSVYKFVYDNWCYLTFDPFGFYVKD 685
Query: 3030 KMTHQMLLRGSLKDGLYCLDLSNSGCSTSKAL*SISVFLSLNNDVNLWHKRLGHCSPSVV 2851
T +ML +G + GLY + S + A+ S + + D++ WH+RLGH S +
Sbjct: 686 LSTGKMLFQGPSEGGLYPFYWNASNGVSGIAI-SPTALMIAKADIHTWHRRLGHPSGGTL 744
Query: 2850 SNVLKQ--LKVSVDLSALNSCDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAHTPS 2677
+V+ + L V ++ ++ C AC++GK + F ++ P QL+++DVWGP+ T S
Sbjct: 745 HSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPSPTSS 804
Query: 2676 VHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWGGEY- 2500
G+++Y+ +DDFT Y+W+YPL K + S LK F+ + T + ++Q+ + D GGE+
Sbjct: 805 CTGYRFYLIIVDDFTKYSWLYPLHFKSDVFSTLKTFILKLQTLLDLQVQSIRSDSGGEFL 864
Query: 2499 -RPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVS 2323
+ + S+ G+ + C +T +QNG +ERKH+H+V+MG TLL+ S LP +FW ++F +
Sbjct: 865 NKSLQSFFNEQGITHQLSCLHTSEQNGCAERKHRHVVEMGRTLLSQSDLPTQFWVEAFQT 924
Query: 2322 SVFTINRLPTPTLQNISHFQKLF 2254
V+ INRLP P IS ++ LF
Sbjct: 925 VVYLINRLP-PQSSVISPWELLF 946
Score = 83.6 bits (205), Expect(2) = 6e-79
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = -2
Query: 2258 FLAKFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGP-SGKIYI 2082
F A Y+ LK FGCAC+P+L+PY+ K F+S +CVF+GYS H GYRC P S ++YI
Sbjct: 946 FHASPKYHTLKAFGCACYPWLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCWDPISNRLYI 1005
Query: 2081 ASTMSFNEDEFRYSSLFS 2028
+ + F+E F Y SL S
Sbjct: 1006 SRHVVFDESLFPYKSLSS 1023
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 298 bits (764), Expect(3) = e-125
Identities = 155/319 (48%), Positives = 206/319 (64%), Gaps = 3/319 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VK TIR++LS+AV+RGW ++ +D+ NAFL+G L+E +YM QP G+E SKP +VCKL K
Sbjct: 1013 VKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDK 1072
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W +L L+ LGF+ S +D LFF +G + +
Sbjct: 1073 ALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTE 1132
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
+ +L K F+LK EV +G++L Q KY DLLK+ N+S+C P
Sbjct: 1133 KATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPV 1192
Query: 913 VTPHCISQKLFLKD-SPLFDN-ATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP +S+KL L + SPL N AT YRS VGALQYLTLTR DI+Y VNK+ QFLH PTT
Sbjct: 1193 STPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTD 1252
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
HW A KR+LRYL + LGL S + +SDADWA ++DD++ST G+ VFLG NL+
Sbjct: 1253 HWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLV 1312
Query: 559 AWSSKKQNVVARSSTETEY 503
+WS++KQ V+RSSTE EY
Sbjct: 1313 SWSARKQPTVSRSSTEAEY 1331
Score = 106 bits (264), Expect(3) = e-125
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 7/118 (5%)
Frame = -2
Query: 1784 TRSKLGIFKPKTFS-------AILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDL 1626
TR + GI K K ++ +T EP EAL WK A +AEY ALIKN TW L
Sbjct: 900 TRLRSGIRKEKVYTDGTVKYGCFTSTGEPQNDKEALGDKNWKAAMEAEYDALIKNDTWHL 959
Query: 1625 VPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
VP+ ++ K V+++K + +G +DR+KA LVAKGF+Q GIDY DTFSPVVK T
Sbjct: 960 VPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 1017
Score = 98.6 bits (244), Expect(3) = e-125
Identities = 43/88 (48%), Positives = 64/88 (72%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+++A T +LIW+++L ELG + + +WCDN+ A L++NPVFHARTKHIEVD H++
Sbjct: 1332 KAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFV 1391
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPL 240
RE+V K +EI ++PS +Q+AD K L
Sbjct: 1392 RERVSQKLLEIDFVPSGDQVADGFTKAL 1419
Score = 319 bits (817), Expect(2) = e-105
Identities = 164/441 (37%), Positives = 256/441 (58%), Gaps = 2/441 (0%)
Frame = -1
Query: 3564 RPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQS 3385
RP+CQ+C K H A+ C+ RFD ++V + +A A
Sbjct: 278 RPTCQVCFKRGHTAADCWYRFDEDYVADEKLAAAA------------------------- 312
Query: 3384 HFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSLR 3205
NS +D NWY+D+GAT H+T +L L+ Y GN+++ +G+ +
Sbjct: 313 ------------TNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGNEQIHTASGAGMD 360
Query: 3204 ISHIDSAILSSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDKM 3025
ISHI + +P S+ L+N+LYVP+ K+L+S SQL DN+ F+E +S + +KD++
Sbjct: 361 ISHIGHTTVHTP--SRNIHLNNVLYVPQAKKSLISASQLATDNSAFLELHSKFFSIKDQV 418
Query: 3024 THQMLLRGSLKDGLYCLDLSNSGCSTSKAL*SISVFLSLNNDVNLWHKRLGHCSPSVVSN 2845
T +LL G + GLY + S ++ +AL + + LS WH RLGH S +V
Sbjct: 419 TKDILLEGRCRHGLYPIPKSFGRTTSKQALGTTKLSLSR------WHSRLGHPSLPIVKQ 472
Query: 2844 VLKQLKVSVDLSALNS--CDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAHTPSVH 2671
V+ + + + ++N C+AC+ K P+ +S S + P +L++SDVWGPA SV
Sbjct: 473 VISKNNLPCSVESVNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPA-PESVG 531
Query: 2670 GFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWGGEYRPI 2491
KYY+ F+DDF+ +TWIY L+ K E K+F ALV F+ KI A Q DWGGEY+ +
Sbjct: 532 RNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKL 591
Query: 2490 SSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSSVFT 2311
+S+ +G+ CP+THQQNG +ERKH+HI+++GL+LL+ + +P KFW ++FV++ +
Sbjct: 592 NSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYL 651
Query: 2310 INRLPTPTLQNISHFQKLFGK 2248
INR+P+ T+QN + +KLF +
Sbjct: 652 INRVPSKTIQNSTPLEKLFNQ 672
Score = 96.3 bits (238), Expect(2) = e-105
Identities = 44/80 (55%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 2264 KNFLAKFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLG-PSGKI 2088
K F K DY L+VFGCAC+P+LRPYN HK QFRS +CVF+G+S HKG++CL SG++
Sbjct: 668 KLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRV 727
Query: 2087 YIASTMSFNEDEFRYSSLFS 2028
YI+ + F+E+ F +S+L S
Sbjct: 728 YISRDVVFDENIFPFSTLHS 747
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 298 bits (764), Expect(3) = e-125
Identities = 157/322 (48%), Positives = 211/322 (65%), Gaps = 3/322 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VK TIR++LS+AV+RGW + +D+ NAFL+G L+E +YM QP GYED +K +VCKL K
Sbjct: 890 VKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDK 949
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W +L LLSLGFQ S +D LFF +G+ V +
Sbjct: 950 ALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTH 1009
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
+ + ++L K F+LK EV+ G++L Q KY DLLKK +S C P
Sbjct: 1010 KATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPI 1069
Query: 913 VTPHCISQKLFLKD-SPLFD-NATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP S+KL + + SPL + + T YRS VGALQYLTLTR DI++ VNK+ QFLH PTT
Sbjct: 1070 STPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTL 1129
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
HW A KR+LRY+K ++LGL S + +FSDADWA ++DD++ST G+ VFLG NL+
Sbjct: 1130 HWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLV 1189
Query: 559 AWSSKKQNVVARSSTETEYSPL 494
+WS++KQ V+RSSTE+EY L
Sbjct: 1190 SWSARKQPTVSRSSTESEYKAL 1211
Score = 103 bits (257), Expect(3) = e-125
Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
Frame = -2
Query: 1784 TRSKLGIFKPKTFS-------AILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDL 1626
TR + G+ KPK ++ ++ EP + EAL WK+A D EYSAL+KN TW L
Sbjct: 777 TRLQQGVRKPKVYTDGTIRYGCFTSSGEPYDLNEALGDVNWKDAMDIEYSALMKNKTWHL 836
Query: 1625 VPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
VP ++ K V+++K + +G +DR+KA LVAKG++Q GIDY DTFSPVVK T
Sbjct: 837 VPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHAT 894
Score = 101 bits (251), Expect(3) = e-125
Identities = 43/88 (48%), Positives = 65/88 (73%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
++LA AT +LIW++ L TE+ + + LWCDN+ A L++NP+FHARTKHIEVD H++
Sbjct: 1209 KALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFV 1268
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPL 240
R++V K ++I Y+P+ +Q+AD KPL
Sbjct: 1269 RDRVAKKLLDIEYVPTGDQVADGFTKPL 1296
Score = 115 bits (287), Expect(2) = 3e-44
Identities = 52/120 (43%), Positives = 80/120 (66%)
Frame = -1
Query: 2607 QSKGETLSILKQFVALVNTHFNSKIQAFQCDWGGEYRPISSYLLSLGVQLRHPCPYTHQQ 2428
Q K E +F +LV F+ KI A Q DWGGEY+ ++++ +G+ CP+ HQQ
Sbjct: 400 QYKSEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQ 459
Query: 2427 NGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSSVFTINRLPTPTLQNISHFQKLFGK 2248
NG +ERKH+HIV++GL+LLA++ +P KFW ++F+++ + INR PT L + F++LF K
Sbjct: 460 NGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHK 519
Score = 95.5 bits (236), Expect(2) = 3e-44
Identities = 39/73 (53%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIASTMS 2067
DY+ L++FGC C+P LRPYN+HK QFRS +CVF+GYS HKG++CL S G++Y++ ++
Sbjct: 522 DYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVT 581
Query: 2066 FNEDEFRYSSLFS 2028
F+E+ F ++SL S
Sbjct: 582 FDENFFPFASLHS 594
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 298 bits (764), Expect(3) = e-125
Identities = 158/319 (49%), Positives = 207/319 (64%), Gaps = 3/319 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VK TIR++LS+AV+RGW ++ +D+ NAFL+G L+E +YM QP G+E SKP +VCKL K
Sbjct: 1022 VKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDK 1081
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W +L L+ LGF+ S +D LFF +G V +
Sbjct: 1082 ALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTE 1141
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
+ +L K F+LK EV S+G++L Q KY DLLK+ N+S+C P
Sbjct: 1142 KATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPV 1201
Query: 913 VTPHCISQKLFLKD-SPLFDN-ATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP +S+KL L + SPL N A YRS VGALQYLTLTR DI+Y VNK+ QFLH PTTS
Sbjct: 1202 STPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTS 1261
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
HW A KR+LRYL + LGL S + +SDADWA +IDD++ST G+ VFLG NL+
Sbjct: 1262 HWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLV 1321
Query: 559 AWSSKKQNVVARSSTETEY 503
+WS++KQ V+RSSTE EY
Sbjct: 1322 SWSARKQPTVSRSSTEAEY 1340
Score = 105 bits (261), Expect(3) = e-125
Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 7/118 (5%)
Frame = -2
Query: 1784 TRSKLGIFKPKTFS-------AILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDL 1626
TR + GI K K ++ +T EP EAL W++A + EY+ALIKN TW L
Sbjct: 909 TRLRSGIRKEKVYTDGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKNDTWHL 968
Query: 1625 VPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
VP+ I+ K V+++K + +G +DR+KA LVAKGF+Q GIDY DTFSPVVK T
Sbjct: 969 VPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 1026
Score = 98.6 bits (244), Expect(3) = e-125
Identities = 43/88 (48%), Positives = 64/88 (72%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+++A T +LIW+++L ELG + + +WCDN+ A L++NPVFHARTKHIEVD H++
Sbjct: 1341 KAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFV 1400
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPL 240
RE+V K +EI ++PS +Q+AD K L
Sbjct: 1401 RERVSQKLLEIDFVPSGDQVADGFTKAL 1428
Score = 296 bits (758), Expect(2) = 3e-99
Identities = 160/442 (36%), Positives = 249/442 (56%), Gaps = 3/442 (0%)
Frame = -1
Query: 3564 RPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQS 3385
RP+CQ+C K H A+ C+ RFD ++V + A A
Sbjct: 277 RPTCQVCFKRGHTAADCWYRFDEDYVADEKLVAAA------------------------- 311
Query: 3384 HFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSLR 3205
NS +D NWY+D+GAT H+T +L L+ Y G +++ +G+ +
Sbjct: 312 ------------TNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMD 359
Query: 3204 ISHIDSAILSSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDKM 3025
ISHI I+ +P S+ L+N+LYVP+ KNL+S SQL DN+ F+E +S + +KD++
Sbjct: 360 ISHIGHTIVHTP--SRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQV 417
Query: 3024 THQMLLRGSLKDGLYCLDLSNSGCSTSKAL*SISVFLSLNNDVNLWHKRLGHCSPSVVSN 2845
T +LL G + GLY + + +AL + + LS WH RLGH S +V
Sbjct: 418 TRDVLLEGKCRHGLYPIPKFFGRSTNKQALGAAKLSLSR------WHSRLGHPSLPIVKQ 471
Query: 2844 VLKQLKVSVDLSALNS--CDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAHTPSVH 2671
V+ + + + ++N C+AC+ K H P+ +S S + P +L++SDVWGPA SV
Sbjct: 472 VISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPA-PESVG 530
Query: 2670 GFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDW-GGEYRP 2494
KYY+ F+DDF+ +TWIY L+ K E K+F ALV F+ KI A Q DW GG Y+
Sbjct: 531 RNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWRGGRYQK 590
Query: 2493 ISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSSVF 2314
++S+ +G+ + +QNG +ERKH+HIV++GL+LL+ + +P KFW ++FV++ +
Sbjct: 591 LNSFFAQIGLIIMCHVLTLIRQNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATY 650
Query: 2313 TINRLPTPTLQNISHFQKLFGK 2248
INR+P+ T+QN + +KLF +
Sbjct: 651 LINRIPSKTIQNSTPLEKLFNQ 672
Score = 98.2 bits (243), Expect(2) = 3e-99
Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -2
Query: 2264 KNFLAKFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLG-PSGKI 2088
K F K DY+ L+VFGCAC+P+LRPYN HK QFRS +CVF+G+S HKG++CL SG++
Sbjct: 668 KLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRV 727
Query: 2087 YIASTMSFNEDEFRYSSLFS 2028
YI+ + F+E+ F +S+L S
Sbjct: 728 YISRDVVFDENVFPFSTLHS 747
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 300 bits (768), Expect(3) = e-124
Identities = 157/322 (48%), Positives = 202/322 (62%), Gaps = 3/322 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VK TIR+VLSLAV+RGW ++ +D+ NAFL+G L+E +YM QP GYE S P +VCKL K
Sbjct: 970 VKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDK 1029
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W +L L LGF S +D LFF ++G V P
Sbjct: 1030 ALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVP 1089
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
+ L K F+LK EVH GL+L+Q KY DLL++ + C P
Sbjct: 1090 DATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPV 1149
Query: 913 VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP S+KL + + L ++T YRS VGALQYLTLTR DIS+ +NK+ QFLH PTT+
Sbjct: 1150 STPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTT 1209
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
HW A KR+LRY+K T GL F +P L + FSDADWA + DD+RST G+ VFLGPNL+
Sbjct: 1210 HWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLV 1269
Query: 559 AWSSKKQNVVARSSTETEYSPL 494
+WS++KQ V+RSS E EY L
Sbjct: 1270 SWSARKQATVSRSSIEAEYKAL 1291
Score = 101 bits (251), Expect(3) = e-124
Identities = 43/103 (41%), Positives = 72/103 (69%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
++LA AT +++W+++L ELG + + LWCDN+ A L++NP+FHARTKHIEVD H++
Sbjct: 1289 KALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFV 1348
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQ 195
RE+V K +EI Y+ +++Q+AD K +P + + + +L+
Sbjct: 1349 RERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNLE 1391
Score = 99.8 bits (247), Expect(3) = e-124
Identities = 55/111 (49%), Positives = 70/111 (63%)
Frame = -2
Query: 1784 TRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPFSPDM 1605
TR + GI K K+ EA+++ WKEA DAEY ALI+N TW LVP
Sbjct: 876 TRLQSGIRKEKSLE------------EAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGR 923
Query: 1604 KIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
++D K V++VK + +G +DR+KA LVAKGF+Q GIDY DTFSPVVK T
Sbjct: 924 NVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 974
Score = 285 bits (730), Expect(2) = 8e-93
Identities = 136/362 (37%), Positives = 219/362 (60%), Gaps = 2/362 (0%)
Frame = -1
Query: 3333 VDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSLRISHIDSAILSSPLISKP 3154
+D NWY+D+GAT H+T +L+ L + YKG DK+ +G+ + I HI +++ +P ++
Sbjct: 284 IDTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVIHTP--TRE 341
Query: 3153 FLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDKMTHQMLLRGSLKDGLYCL 2974
L N+L+VP+ KNL+S +L DN F+E +S+Y +KD+ T +L+G + LY L
Sbjct: 342 LHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNTILKGRCRRRLYSL 401
Query: 2973 DLSNSGCSTSKAL*SISVFLSLNNDVNLWHKRLGHCSPSVVSNVLKQ--LKVSVDLSALN 2800
S + V + + WH RLGH + +V+ VL + L S + +
Sbjct: 402 PTSPAK----------QVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDS 451
Query: 2799 SCDACKVGKLHAHPFPQSKSQTTAPFQLIYSDVWGPAHTPSVHGFKYYIHFLDDFTNYTW 2620
CDAC+ GK H P+P+S S ++ P +LI+S+VWGPA SV G K+Y+ F+DD++ +TW
Sbjct: 452 ICDACQKGKSHQLPYPKSSSVSSQPLELIFSNVWGPAPI-SVGGKKFYVSFIDDYSKFTW 510
Query: 2619 IYPLQSKGETLSILKQFVALVNTHFNSKIQAFQCDWGGEYRPISSYLLSLGVQLRHPCPY 2440
+Y L+ K E ++F LV F KI A Q DWGGEY+ ++++ +G+ CPY
Sbjct: 511 VYLLKHKSEVFQKFQEFQTLVERFFGHKILAVQTDWGGEYQKLNTFFAKIGISHHVSCPY 570
Query: 2439 THQQNGKSERKHQHIVDMGLTLLANSGLPYKFWWDSFVSSVFTINRLPTPTLQNISHFQK 2260
HQQNG +ERKH+H++++ LTLLA++ +P KFW ++ +++ + INR P+ + ++
Sbjct: 571 AHQQNGSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPSKVINFACPLEQ 630
Query: 2259 LF 2254
LF
Sbjct: 631 LF 632
Score = 87.4 bits (215), Expect(2) = 8e-93
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = -2
Query: 2258 FLAKFDYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLG-PSGKIYI 2082
F K +Y L++FGCA +P LRPYN HK FRS +CVF+GYS HKG++CL +G++Y+
Sbjct: 632 FKEKPNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYV 691
Query: 2081 ASTMSFNEDEFRYSSLFS 2028
+ ++F+E F +S L S
Sbjct: 692 SRDVTFDESIFPFSELHS 709
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 302 bits (773), Expect(3) = e-124
Identities = 155/322 (48%), Positives = 209/322 (64%), Gaps = 3/322 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VK TIRL+LS+AV++GW ++ +D+ NAFL+G L+E +YM QP G+E+ +P ++CKL K
Sbjct: 511 VKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLCKLDK 570
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W +L L LGF S +D LFF +G V S
Sbjct: 571 ALYGLKQAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSA 630
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
+V + +L+K F+LK EV S GL+L+Q Y D+LK+ +S C P
Sbjct: 631 EVVAALLKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRAGMSICKPA 690
Query: 913 VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP ++KL ++D ++A+ YRS VGALQYLTLTRSD+S++VNK+ QFLH PTT
Sbjct: 691 STPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTV 750
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
HW A KR+LRY+KGT GL F S + + +FSDADWA DD+RST G+ VFLGPNLI
Sbjct: 751 HWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLI 810
Query: 559 AWSSKKQNVVARSSTETEYSPL 494
+WS++KQ V+RSSTE EY L
Sbjct: 811 SWSARKQATVSRSSTEAEYKAL 832
Score = 102 bits (253), Expect(3) = e-124
Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 7/119 (5%)
Frame = -2
Query: 1787 ITRSKLGIFKPKTFS-------AILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWD 1629
+TR + GI KPK ++ + T EP + EA+++ W+ A + EYSA + N TW
Sbjct: 397 VTRLQKGISKPKRYTDGTVRYGCLTTTGEPENLREAMANSNWRLAMEQEYSAFMSNKTWH 456
Query: 1628 LVPFSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
LVP + I+D K ++++K + +G +DR+KA LVAKGF+Q GIDY DTFS VVK T
Sbjct: 457 LVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFSLVVKAAT 515
Score = 97.1 bits (240), Expect(3) = e-124
Identities = 41/90 (45%), Positives = 65/90 (72%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
++LA ATT++ W++ + EL + + LWCDN+ A L++NPVFHARTKHIE+D H++
Sbjct: 830 KALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFV 889
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPS 234
RE+V K ++I+++ + +QLAD K LP+
Sbjct: 890 REQVAKKLLDIQFISTTDQLADGFTKSLPA 919
Score = 82.0 bits (201), Expect = 6e-12
Identities = 43/120 (35%), Positives = 61/120 (50%)
Frame = -1
Query: 3567 NRPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQ 3388
NRP+CQ+CGK H KC+KRFD +F G D S+NV+
Sbjct: 190 NRPTCQLCGKIGHTVHKCWKRFDASFTGED----------------------KSANVAAS 227
Query: 3387 SHFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSL 3208
S+ EVD NWY+DSGAT H+T++L+ L++ Y GND++ +GS +
Sbjct: 228 SY---------------EVDTNWYIDSGATDHITSELDKLTVKDKYAGNDQVHTASGSGV 272
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 283 bits (725), Expect(3) = e-124
Identities = 161/324 (49%), Positives = 209/324 (64%), Gaps = 5/324 (1%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VKP+TIR+VLSLAVT W ++ +DINNAFL G L+E IYM+QP G+ + + VCKL K
Sbjct: 978 VKPVTIRIVLSLAVTFQWPLRQLDINNAFLNGMLEEDIYMSQPPGFIEPNSKHLVCKLHK 1037
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
++YGLKQAP++W D+L LL LGF S D LF ++ +TG+S
Sbjct: 1038 SLYGLKQAPRAWFDRLTSVLLKLGFHKSKCDPSLFIFSTPSAIVYMLIYVDDIILTGNSS 1097
Query: 1090 SLVQQVFANLQKVFSLKH-XXXXXXXXLEVHSSSHG-LLLNQHKYILDLLKKTNLSSCNP 917
SL+QQ +L FSLK +EV S S+G LLL+QHKYI DLL K +
Sbjct: 1098 SLMQQFINHLHATFSLKDLGTLDYFLGIEVKSLSNGRLLLSQHKYISDLLTKVKMEDSKG 1157
Query: 916 CVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSH 737
TP Q+L K LF++ TLYRS VGALQY T+TR +I++ VNK+SQF+ P H
Sbjct: 1158 ISTPMIGGQQL-AKTGTLFNDPTLYRSVVGALQYATITRPEIAFSVNKVSQFMCSPMEEH 1216
Query: 736 WGACKRVLRYLKGTSHLGLMFSP---SPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPN 566
W KR+LRYLKGT GL+F+P S +L +F+DADWA+ +D+RSTS C++LGPN
Sbjct: 1217 WKVVKRILRYLKGTLKHGLVFTPARSSSSFNLTAFTDADWAADPNDRRSTSAACIYLGPN 1276
Query: 565 LIAWSSKKQNVVARSSTETEYSPL 494
L++W SKKQ +VARSSTE EY L
Sbjct: 1277 LVSWWSKKQLLVARSSTEAEYRAL 1300
Score = 123 bits (308), Expect(3) = e-124
Identities = 61/116 (52%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTF-SAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVP 1620
HPMITRSK GI +P+ + +L+ EP TV AL+ P W A AE +AL NHTW LV
Sbjct: 867 HPMITRSKNGILQPRLNPTLLLSNVEPKTVKSALTDPHWLSAMQAELTALHDNHTWTLVD 926
Query: 1619 FSPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
P K + K VFR+K P+G ++++KA LVAKGF Q PG+D+ +TFSPVVKP+T
Sbjct: 927 LPPGRKSIGCKWVFRLKENPDGSINKYKARLVAKGFHQQPGVDFSETFSPVVKPVT 982
Score = 93.6 bits (231), Expect(3) = e-124
Identities = 45/109 (41%), Positives = 74/109 (67%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
++LA A T+++WI+SL EL + VL CDN S ++L+ NPV H+R+KH+E+D+ ++
Sbjct: 1298 RALAQAVTEVLWIQSLLQELKIRFNTPMVL-CDNQSTVALSHNPVLHSRSKHMELDIFFV 1356
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPPGLV 177
REKV +K + + ++PS+ Q AD+L K L RF +L SK ++ P ++
Sbjct: 1357 REKVISKALVVSHIPSQHQYADLLTKALSPKRFLSLRSKLNVADPSDML 1405
Score = 231 bits (589), Expect(2) = 2e-83
Identities = 145/455 (31%), Positives = 232/455 (50%), Gaps = 26/455 (5%)
Frame = -1
Query: 3570 RNRPS---CQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSN 3400
RNR S CQIC K H AS C++ + +G + + H P +Y ++
Sbjct: 254 RNRGSQVQCQICHKRGHEASTCYQLSNSLALGASWSPYSLGGSLPGSVFHPPGFTYPTAP 313
Query: 3399 VSF----QSHFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKL 3232
+ ++ AA + ++N+A W DSGA+ H T D L + + G + +
Sbjct: 314 ANPPPRPRTASASAAPPAAPTLNTATA---WIPDSGASHHATPDPQYLLQSAQFTGAEHI 370
Query: 3231 TIGNGSSLRISHIDSAILSSPLISKPFL-LHNMLYVPEISKNLLSISQLTRDNNVFIEFY 3055
+ NG I+ + S + SP+ L L ++L VP ++KNL+S+S+ +DNNV+ F+
Sbjct: 371 AMANGQGTSITSVGSNMFRSPMHPSTILSLKDLLLVPSLTKNLISVSKFAKDNNVYFVFH 430
Query: 3054 SDYCFVKDKMTHQMLLRGSL-KDGLYCLD--LSNSGCSTSKAL*SI-------SVFLS-- 2911
CFVK + ++ LL G L +DGLY L+ S + ++ +FLS
Sbjct: 431 PHSCFVKSQDLNETLLEGHLGEDGLYHFHPHLATKTSSNTNIEQNLIFSKPDPCIFLSEK 490
Query: 2910 ----LNNDVNLWHKRLGHCSPSVVSNVLKQLKVSVDL--SALNSCDACKVGKLHAHPFPQ 2749
+ N WH RLGH ++ L+ + + + CD+C + K H P
Sbjct: 491 CNSVVPNTYKQWHLRLGHPHHDSLTRALQTCNIRLPTVNKISDFCDSCCIAKSHRLPSHP 550
Query: 2748 SKSQTTAPFQLIYSDVWGPAHTPSVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQF 2569
S + + P +L++ DVWGPA S G+ Y++ +D T Y WIY L+ K + S + F
Sbjct: 551 STTIYSKPLELVFLDVWGPASLESSCGYLYFLTCVDACTKYVWIYLLRRKSDVFSNFQNF 610
Query: 2568 VALVNTHFNSKIQAFQCDWGGEYRPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVD 2389
AL F +++ Q D GGE+R + S+ G+ R CPYTH QNG ER+H+HIV+
Sbjct: 611 KALAEKQFQLPLKSVQTDGGGEFRALISFFQQEGILHRLTCPYTHHQNGTVERRHRHIVE 670
Query: 2388 MGLTLLANSGLPYKFWWDSFVSSVFTINRLPTPTL 2284
+GL +L +S LP FW +F+++ + INRLP+ ++
Sbjct: 671 LGLAMLHHSTLPLNFWDHAFLTATYLINRLPSSSV 705
Score = 110 bits (275), Expect(2) = 2e-83
Identities = 47/71 (66%), Positives = 54/71 (76%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 2064
DY FLKVFGC+CFP LRPYN HK Q RS +CVF+GYSP HKGY+CL SG+IYI+ + F
Sbjct: 720 DYTFLKVFGCSCFPLLRPYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYISKDVIF 779
Query: 2063 NEDEFRYSSLF 2031
NE F Y LF
Sbjct: 780 NEGRFPYHDLF 790
>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1403
Score = 284 bits (727), Expect(3) = e-124
Identities = 152/321 (47%), Positives = 206/321 (64%), Gaps = 2/321 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VKP++IR+VL+LAV++GW I ID++NAFL GDLKE IYM QP G+ + P VCKL K
Sbjct: 969 VKPVSIRIVLALAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHN-GAPNTVCKLRK 1027
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W KL LL LGF+ + SD LF + +T +SP
Sbjct: 1028 ALYGLKQAPRAWFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYVDDIIITSNSP 1087
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSS-SHGLLLNQHKYILDLLKKTNLSSCNP 917
+ +Q + + L + F LK EV+S + G+ L+Q KY+ D+L K N+S+ P
Sbjct: 1088 AAIQTLISTLHRFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDILDKLNMSNAKP 1147
Query: 916 CVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSH 737
TP S KL + + + +LYRS +GALQYLT+TR DI+Y VNKL QF+H P SH
Sbjct: 1148 VKTPMAPSLKLTNDGTAVCPDPSLYRSVIGALQYLTITRPDIAYTVNKLCQFMHHPLESH 1207
Query: 736 WGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIA 557
W A KR+LRYL+GT GL + S + ++ D+DWAS +D RSTSG CV+LGPN+++
Sbjct: 1208 WKAVKRLLRYLQGTLQHGLHYKKSTDTGIHAYCDSDWASDHEDMRSTSGNCVYLGPNIVS 1267
Query: 556 WSSKKQNVVARSSTETEYSPL 494
W +KKQ VV+RSSTE E+ L
Sbjct: 1268 WMAKKQRVVSRSSTEAEFRSL 1288
Score = 131 bits (329), Expect(3) = e-124
Identities = 63/115 (54%), Positives = 82/115 (71%)
Frame = -2
Query: 1796 HPMITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPF 1617
HPMITR+K+G+FKPK F A TSEP +V +AL + WK+A EY+AL+KNHTWDLV
Sbjct: 862 HPMITRAKIGVFKPKAFLA---TSEPISVAQALDNKHWKQAMQDEYNALLKNHTWDLVSL 918
Query: 1616 SPDMKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
P + K +F+ KY+ +G + R KA LVA+GF Q G+DY DTFSPVVKP++
Sbjct: 919 PPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVS 973
Score = 84.7 bits (208), Expect(3) = e-124
Identities = 38/102 (37%), Positives = 69/102 (67%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
+SLA+ T++ +I++L +EL S Q ++WCDN A+ L++NPV H +TKH E+D+ ++
Sbjct: 1286 RSLASLVTEVQYIQNLLSELHNSSTQPPLIWCDNQGAVLLSANPVLHTKTKHFELDLWFV 1345
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 198
RE+V +++++++P+ Q+AD+L K S F L K ++
Sbjct: 1346 RERVARGQIQVKHIPARFQVADLLTKAPSSSIFLALRHKLTV 1387
Score = 336 bits (861), Expect(2) = e-111
Identities = 177/454 (38%), Positives = 260/454 (57%), Gaps = 13/454 (2%)
Frame = -1
Query: 3567 NRPSCQICGKNNHIASKCFKRFDVNFVGIDLCSAQAHIASTTTDNHKPAPSYDSSNVSFQ 3388
N+ CQ+CGK HIA C+ R+D + +L NH ++NV
Sbjct: 269 NKQPCQVCGKIGHIAFHCWHRYDQQYTEPNL-------------NH-------NTNVYNP 308
Query: 3387 SHFTQAAGNSFDSMNSAEVDANWYVDSGATTHVTADLNNLSIHSLYKGNDKLTIGNGSSL 3208
+ Q S N D WY DSGAT H+T+DLNNL + Y G DK+ +GNG ++
Sbjct: 309 GNQQQMQAMIAGSQNMV-YDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDKIHMGNGQAI 367
Query: 3207 RISHIDSAILSSPLISKPFLLHNMLYVPEISKNLLSISQLTRDNNVFIEFYSDYCFVKDK 3028
I+H ++ +P+ SK F L +L+VP I+KNLLS+S+ +DNNV++EF+++YC VK +
Sbjct: 368 GINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYCLVKSQ 427
Query: 3027 MTHQMLLRGSLKDGLYCLDLSN-----------SGCSTSKAL*SISVFLSLNNDVNLWHK 2881
+ + LLRG+LK+GLY D T++ + ++WH
Sbjct: 428 DSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRTTLYVQ---RTRKSYDVWHN 484
Query: 2880 RLGHCSPSVVSNVLKQLKVSVDLSALNS--CDACKVGKLHAHPFPQSKSQTTAPFQLIYS 2707
RL H S +V V+K V + ++ +S C +C +GK H PF S + +P +L+YS
Sbjct: 485 RLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPLELVYS 544
Query: 2706 DVWGPAHTPSVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQA 2527
DVWGP+H S GF+YY+HF D F+ YTWIY + +K ET F ++V F KI+
Sbjct: 545 DVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQFGHKIKM 604
Query: 2526 FQCDWGGEYRPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPYK 2347
FQ D G E+ ++ G+ R CP++HQQNG +ERKH+HI ++GLTLL++SGLP+
Sbjct: 605 FQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSSSGLPHI 664
Query: 2346 FWWDSFVSSVFTINRLPTPTLQNISHFQKLFGKI 2245
FW D+F +++ INRLPTP L + S ++ LF KI
Sbjct: 665 FWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKI 698
Score = 97.1 bits (240), Expect(2) = e-111
Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPSGKIYIASTMSF 2064
DY L+ FGCAC+P+LRP+N+HK FRSS+CVFIGYS HKGY+C +GKI I+ + F
Sbjct: 700 DYLLLRPFGCACYPHLRPFNSHKMDFRSSQCVFIGYSMQHKGYKCFTTNGKIIISRNVVF 759
Query: 2063 NEDEFRYSSLF----------SISPLSQLLIHLLPFQ 1983
+ED F S F S SP IH+LP Q
Sbjct: 760 DEDTFPGPSYFNTNNVAGLSSSHSPQPVPSIHVLPSQ 796
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 296 bits (759), Expect(3) = e-123
Identities = 157/322 (48%), Positives = 205/322 (63%), Gaps = 3/322 (0%)
Frame = -3
Query: 1450 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1271
VK TIR++LS+AV+RGW ++ +D+ NAFL+G L+E +YM QP GYED P +VCKL K
Sbjct: 833 VKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVCKLDK 892
Query: 1270 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1091
A+YGLKQAP++W KL L LGFQ S +D LFF +G V
Sbjct: 893 ALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQ 952
Query: 1090 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 914
V + +LQK F+LK EV+ +S G++L Q KY+ DLL++ ++ C P
Sbjct: 953 DAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPV 1012
Query: 913 VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 740
TP S+KL L + L ++A+ YRS VGALQYLTLTR DI + VNK+ QFLH PT
Sbjct: 1013 STPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIV 1072
Query: 739 HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 560
HW A KR+LRYLK + LGL S S + + +SDADWA IDD+RST G+ VFLG NL+
Sbjct: 1073 HWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLV 1132
Query: 559 AWSSKKQNVVARSSTETEYSPL 494
+W++KKQ V RSSTE+EY L
Sbjct: 1133 SWNAKKQATVPRSSTESEYKAL 1154
Score = 102 bits (254), Expect(3) = e-123
Identities = 50/112 (44%), Positives = 71/112 (63%)
Frame = -2
Query: 1787 ITRSKLGIFKPKTFSAILNTSEPSTVMEALSHPKWKEARDAEYSALIKNHTWDLVPFSPD 1608
I + K+ + + + T EP + +AL WK A DA+++AL+ N TW LVP
Sbjct: 726 IRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHAMDAKFTALLHNKTWHLVPPQKG 785
Query: 1607 MKIVDHKLVFRVKYQPNGEVDRFKAILVAKGFQQLPGIDYFDTFSPVVKPIT 1452
I+D+K V+++K + +G +DR+KA LVAKGF+Q GIDY DTFSPVVK T
Sbjct: 786 RNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 837
Score = 98.6 bits (244), Expect(3) = e-123
Identities = 43/94 (45%), Positives = 67/94 (71%)
Frame = -2
Query: 503 QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 324
++LA AT +++WI++L EL + LWCDN+ A L+SNPVFHARTKHIEVD H++
Sbjct: 1152 KALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFV 1211
Query: 323 REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQ 222
RE++Q K +E+ ++P+ +Q+AD K L + + +
Sbjct: 1212 RERMQRKLLEVEFIPTGDQVADGFTKALSARQLE 1245
Score = 152 bits (384), Expect(2) = 1e-54
Identities = 71/152 (46%), Positives = 101/152 (66%)
Frame = -1
Query: 2709 SDVWGPAHTPSVHGFKYYIHFLDDFTNYTWIYPLQSKGETLSILKQFVALVNTHFNSKIQ 2530
+DVWGPA G KYY+ F+D F+ +TWIY L+ K E ++F LV FN KI
Sbjct: 349 ADVWGPAPVAG-GGKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKII 407
Query: 2529 AFQCDWGGEYRPISSYLLSLGVQLRHPCPYTHQQNGKSERKHQHIVDMGLTLLANSGLPY 2350
+ Q DWGGEY+ ++++ +G+ CP+THQQNG +ERKH+HIV++GL+LLA++ LP
Sbjct: 408 SMQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPL 467
Query: 2349 KFWWDSFVSSVFTINRLPTPTLQNISHFQKLF 2254
KFW +++ S V+ INR+PT L S + LF
Sbjct: 468 KFWDEAYQSGVYLINRMPTKVLGYSSPLECLF 499
Score = 93.2 bits (230), Expect(2) = 1e-54
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = -2
Query: 2243 DYNFLKVFGCACFPYLRPYNNHKFQFRSSKCVFIGYSPFHKGYRCLGPS-GKIYIASTMS 2067
DY L+ FGCAC+P LRPYN+HK FRS +C F+GYSP HKG+RCL S G+IYI+ +
Sbjct: 504 DYQALRTFGCACWPDLRPYNSHKMHFRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVV 563
Query: 2066 FNEDEFRYSSL 2034
F+E F ++ L
Sbjct: 564 FDESVFPFAEL 574