BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00018114
         (1142 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposo...   204   5e-97
gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposo...   202   3e-96
gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposo...   201   8e-96
gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposo...   201   2e-95
gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposo...   197   7e-94
gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposo...   196   7e-94
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo...   192   2e-92
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo...   194   3e-92
gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposo...   192   5e-92
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]   198   5e-92
gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo...   193   6e-92
gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposo...   195   1e-91
gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposo...   195   2e-90
gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposo...   191   3e-90
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]   191   5e-90
gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposo...   195   1e-88
gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposo...   180   5e-87
gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposo...   180   5e-87
gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposo...   180   8e-87
gb|KYP55908.1| Retrovirus-related Pol polyprotein from transposo...   181   2e-85

>gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1011

 Score =  204 bits (520), Expect(2) = 5e-97
 Identities = 114/235 (48%), Positives = 147/235 (62%), Gaps = 1/235 (0%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAK+DEGIFLGYS  SK++R+ NKRTM  EESIHVVFDE N+              
Sbjct: 365  LGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESIHVVFDETNL-------------- 410

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQS-NTAARRLNPANLLQP 795
                  P  +    I+ S ED     Q   ++    D E+ D +       +NP    Q 
Sbjct: 411  ----VCPRRDIIDEIVESFEDTHINEQTHKDD---KDKEKEDSTIQEGQTNINP----QR 459

Query: 796  DVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQE 975
            + R  R+HP E +IGDI +GV TR+  ++      F+S+IE K++ +AL+D HWI AMQE
Sbjct: 460  EWRISRNHPLENIIGDITKGVITRNSLKEACNNMSFVSEIEVKNIDEALNDEHWINAMQE 519

Query: 976  ELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            ELNQFERN+VW+LV RPT+  +IGTKW+FRNK++E G V+RNKARLVAKGY QEE
Sbjct: 520  ELNQFERNQVWDLVNRPTNHPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEE 574



 Score =  179 bits (454), Expect(2) = 5e-97
 Identities = 84/146 (57%), Positives = 104/146 (71%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K +T     +  K IQN+K+  I+ IRSD G EF N     +C ENGI H  SA RT
Sbjct: 219 LANKSDTFGVFRKFAKLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRT 278

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML ++ LPK FWAEA+NTACYT NR +I   L KTPYE++
Sbjct: 279 PQQNGVVERKNRSLEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELF 338

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKDN 439
            GRKPN+++  IFGCKCF+ NNGKDN
Sbjct: 339 NGRKPNISHLHIFGCKCFVLNNGKDN 364


>gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1021

 Score =  202 bits (513), Expect(2) = 3e-96
 Identities = 111/234 (47%), Positives = 145/234 (61%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAK+DEGIFLGYS  SK++R+ NKRTM  EESIHVVFDE N+              
Sbjct: 375  LGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESIHVVFDETNL-------------- 420

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
                  P  +    I+ S ED     Q         DD+  ++ ++  +        Q +
Sbjct: 421  ----VCPRRDIIDEIVESFEDTHINEQTH------KDDKDKEKEDSTIQEGQTNINSQRE 470

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             R  R+HP E +IGDI +GV TR+  ++      F+S+IE K++ +AL+D HWI AMQEE
Sbjct: 471  WRISRNHPLENIIGDITKGVITRNSLKEACNNMSFVSEIEVKNIDEALNDEHWINAMQEE 530

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQFERN+VW+LV RPT+  +IGTKW+FRNK++E G V+RNKARLVAKGY QEE
Sbjct: 531  LNQFERNQVWDLVNRPTNHPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEE 584



 Score =  179 bits (454), Expect(2) = 3e-96
 Identities = 84/146 (57%), Positives = 104/146 (71%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K +T     +  K IQN+K+  I+ IRSD G EF N     +C ENGI H  SA RT
Sbjct: 229 LANKSDTFGVFRKFAKLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRT 288

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML ++ LPK FWAEA+NTACYT NR +I   L KTPYE++
Sbjct: 289 PQQNGVVERKNRSLEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELF 348

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKDN 439
            GRKPN+++  IFGCKCF+ NNGKDN
Sbjct: 349 NGRKPNISHLHIFGCKCFVLNNGKDN 374


>gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 900

 Score =  201 bits (510), Expect(2) = 8e-96
 Identities = 109/234 (46%), Positives = 145/234 (61%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAK+DEGIFLGYS  SK++R+ NKRTM  EES+HVVFDE N+              
Sbjct: 254  LGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESVHVVFDETNL-------------- 299

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
                  P  +    I+ S ED     Q         DD+  ++ ++  +        + +
Sbjct: 300  ----VCPRRDVFDEIVESFEDTHLNEQTH------KDDKDKEKEDSTIQEGQTNINSERE 349

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             R  R+HP E +IGDI +GV TR+  ++      F+S+IE K++ +AL+D HWI AMQEE
Sbjct: 350  WRISRNHPLENIIGDITKGVITRNSLKEACNNMSFVSEIEVKNIDEALNDEHWINAMQEE 409

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQFERN+VW+LV RPT+  +IGTKW+FRNK++E G V+RNKARLVAKGY QEE
Sbjct: 410  LNQFERNQVWDLVNRPTNHPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEE 463



 Score =  179 bits (454), Expect(2) = 8e-96
 Identities = 84/146 (57%), Positives = 104/146 (71%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K +T     +  K IQN+K+  I+ IRSD G EF N     +C ENGI H  SA RT
Sbjct: 108 LANKSDTFGVFRKFAKLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRT 167

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML ++ LPK FWAEA+NTACYT NR +I   L KTPYE++
Sbjct: 168 PQQNGVVERKNRSLEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELF 227

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKDN 439
            GRKPN+++  IFGCKCF+ NNGKDN
Sbjct: 228 NGRKPNISHLHIFGCKCFVLNNGKDN 253


>gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 963

 Score =  201 bits (511), Expect(2) = 2e-95
 Identities = 108/237 (45%), Positives = 140/237 (59%), Gaps = 3/237 (1%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIEESADK 609
            L  FDAKADE IFLGYS  SKAYRV NKRT++ EES+H+VFDE N       +IE+  D 
Sbjct: 337  LGKFDAKADEAIFLGYSTNSKAYRVYNKRTLIVEESVHIVFDETNKQETKQTEIEDLTDL 396

Query: 610  LNHPTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLL 789
            L+ P ++  P                              +E+  +S +     N +  L
Sbjct: 397  LDQPLLESEP------------------------------NEKPKESESNETTENTSEQL 426

Query: 790  QPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAM 969
              + +  RD   E +IG+I +GV TR   +       F+SQ+EPK + +AL D HW+ AM
Sbjct: 427  PKEWKTSRDLSMENIIGNIGKGVSTRRAIKNICNVMAFVSQVEPKTIDEALQDEHWLMAM 486

Query: 970  QEELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            QEELNQFERN+VW+LV  PT   +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 487  QEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEE 543



 Score =  177 bits (449), Expect(2) = 2e-95
 Identities = 82/145 (56%), Positives = 103/145 (71%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K E      +  K +QNEK+ +I  IRSD G EF N +  ++C E+ I H  SA RT
Sbjct: 191 LANKNEAFNAFKKFTKLVQNEKNSSITSIRSDHGGEFQNILFQKFCEEHDINHNFSAPRT 250

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ERRNR+L+E ARTML E  LPK FWA+AINTAC+  N+ +I   L KTPYEI+
Sbjct: 251 PQQNGVVERRNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 310

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKD 436
            GRKPN++YFR+FGCKCF+ NNGK+
Sbjct: 311 NGRKPNISYFRVFGCKCFVLNNGKE 335


>gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1470

 Score =  197 bits (502), Expect(2) = 7e-94
 Identities = 108/237 (45%), Positives = 143/237 (60%), Gaps = 3/237 (1%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIEESADK 609
            L  FDAKADE IFLGYS  SKAYR+ NKRT+V EES+HVVFDE N       +IE+  D 
Sbjct: 922  LGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTDL 981

Query: 610  LNHPTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLL 789
            L+ P             ++ S+ +   +  +  EN + + ++   +  T+          
Sbjct: 982  LDQP-------------LLESETNNKPKESESHENTKETSEQLPKEWKTS---------- 1018

Query: 790  QPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAM 969
                   RD   + +IG+I +GV TRS  +       F+SQ+EPK + +AL D HW+ AM
Sbjct: 1019 -------RDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAM 1071

Query: 970  QEELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            QEELNQFERN+VW+LV  PT   +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 1072 QEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEE 1128



 Score =  176 bits (445), Expect(2) = 7e-94
 Identities = 81/145 (55%), Positives = 102/145 (70%)
 Frame = +2

Query: 2    MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
            +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 776  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 835

Query: 182  PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
            PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINTAC+  N+ +I   L KTPYEI+
Sbjct: 836  PQQNGVVERKNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 895

Query: 362  TGRKPNVAYFRIFGCKCFIHNNGKD 436
             GRKPN++YFR+FGCKCF+ NNGK+
Sbjct: 896  NGRKPNISYFRVFGCKCFVLNNGKE 920


>gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1010

 Score =  196 bits (499), Expect(2) = 7e-94
 Identities = 108/237 (45%), Positives = 142/237 (59%), Gaps = 3/237 (1%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIEESADK 609
            L  FDAKADE IFLGYS  SKAYRV NKRT+V EES+HVVFDE N       +IE+  D 
Sbjct: 368  LGKFDAKADEAIFLGYSTNSKAYRVYNKRTLVVEESVHVVFDETNKQETKKTEIEDLTDF 427

Query: 610  LNHPTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLL 789
            L+ P ++  P                +E  K+ E+++ +                 +  L
Sbjct: 428  LDQPPLESEP----------------SEKPKESESIETTK--------------KTSEQL 457

Query: 790  QPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAM 969
              + +  +D   E +IG+I +GV TR   +       F+SQ+EPK + +AL D HW+ AM
Sbjct: 458  PKEWKTSKDLSIENIIGNIGKGVSTRRSIKNICNTMAFVSQVEPKTIDEALHDEHWLMAM 517

Query: 970  QEELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            QEELNQFERN+VW+LV  P+   +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 518  QEELNQFERNEVWDLVPLPSDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEE 574



 Score =  177 bits (448), Expect(2) = 7e-94
 Identities = 81/145 (55%), Positives = 103/145 (71%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K E      +  K +QNEK+  I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 222 LANKSEAFNAFKKFAKLVQNEKNTNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRT 281

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINTAC+  N+ +I   L +TPYEI+
Sbjct: 282 PQQNGVVERKNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKRTPYEIY 341

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKD 436
            GRKPN++YFR+FGCKCF+ NNGK+
Sbjct: 342 NGRKPNISYFRVFGCKCFVLNNGKE 366


>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 772

 Score =  192 bits (489), Expect(2) = 2e-92
 Identities = 111/234 (47%), Positives = 140/234 (59%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAKADE IFLGYS  SKAYR+ NKRT+V EES+HVVFDE N               
Sbjct: 368  LGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESN--------------- 412

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
               Q++   E E      D  E+ + Q  LEN     +E   +S +  +       L  +
Sbjct: 413  --KQETRQTEIE------DLTELLD-QSLLEN---EPNEVPKESESHEKAKETCEQLPKE 460

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             R  RD   + +IG+I +GV TRS  +       F+SQ+EPK + +AL D HW+ AMQEE
Sbjct: 461  WRTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEE 520

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQFERN+VW+LV  P    +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 521  LNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 574



 Score =  176 bits (445), Expect(2) = 2e-92
 Identities = 80/145 (55%), Positives = 102/145 (70%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 222 LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNMMFQKFCEEHGINHNFSAPRT 281

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINTAC+  N+ +I   L KTPYEI+
Sbjct: 282 PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 341

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKD 436
            GRKPN++YFR+FGCKC++ NNGK+
Sbjct: 342 NGRKPNISYFRVFGCKCYVLNNGKE 366


>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1564

 Score =  194 bits (492), Expect(2) = 3e-92
 Identities = 106/234 (45%), Positives = 143/234 (61%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAKADE IFLGYS  SKAYR+ NKRT+V EES+HVVFDE N   E  +   + LN 
Sbjct: 922  LGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQ-ETRQTEIEDLNE 980

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
               Q          ++ ++ +E+ +  + LE  + + ++   +  T+             
Sbjct: 981  LLDQS---------LLENEPNEVPKESESLEKAKETCEQLPKEWKTS------------- 1018

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
                RD   + +IG+I +GV TRS  +       F+SQ+EPK++ +AL D HW+ AMQEE
Sbjct: 1019 ----RDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEE 1074

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQFERN+VW+LV  P    +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 1075 LNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 1128



 Score =  174 bits (441), Expect(2) = 3e-92
 Identities = 79/145 (54%), Positives = 102/145 (70%)
 Frame = +2

Query: 2    MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
            +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 776  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRT 835

Query: 182  PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
            PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINTAC+  N+ +I   L KTPYEI+
Sbjct: 836  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 895

Query: 362  TGRKPNVAYFRIFGCKCFIHNNGKD 436
             G+KPN++YFR+FGCKC++ NNGK+
Sbjct: 896  KGKKPNISYFRVFGCKCYVLNNGKE 920


>gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1569

 Score =  192 bits (488), Expect(2) = 5e-92
 Identities = 104/237 (43%), Positives = 140/237 (59%), Gaps = 3/237 (1%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIEESADK 609
            L  FDAKADE IFLGYS  SK+YR+ NKRT+V EES+HVVFDE N       +IE+  + 
Sbjct: 927  LGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNEL 986

Query: 610  LNHPTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLL 789
            L+ P ++  P  +++  + +  E    E                               L
Sbjct: 987  LDQPLLESEPNEKSKESVSHEKEKVTCEQ------------------------------L 1016

Query: 790  QPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAM 969
              + +  R+   + +IG+I +GV TRS  +       F+SQ+EPK++ +AL D HW+ AM
Sbjct: 1017 PKEWKTSRELSIDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1076

Query: 970  QEELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            QEELNQFERN+VW+LV  P    +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 1077 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 1133



 Score =  175 bits (443), Expect(2) = 5e-92
 Identities = 80/145 (55%), Positives = 102/145 (70%)
 Frame = +2

Query: 2    MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
            +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 781  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 840

Query: 182  PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
            PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINTAC+  NR +I   L KTPYEI+
Sbjct: 841  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNRVLIRPILKKTPYEIY 900

Query: 362  TGRKPNVAYFRIFGCKCFIHNNGKD 436
             G+KPN++YFR+FGCKC++ NNGK+
Sbjct: 901  KGKKPNISYFRVFGCKCYVLNNGKE 925


>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
          Length = 1409

 Score =  198 bits (503), Expect(2) = 5e-92
 Identities = 111/235 (47%), Positives = 149/235 (63%), Gaps = 1/235 (0%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAK+D GIFLGYS  SKA+RV NKRTMV EESIHV+FDE N + ++ E   D L  
Sbjct: 837  LGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVVEESIHVIFDESNNSLQERESFDDDLGL 896

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLEN-LQLSDDERADQSNTAARRLNPANLLQP 795
             T       E         ++E+ E  K+ E+ L L   ++    ++          L  
Sbjct: 897  ETSMGKLQIEDRR-----QQEEVVEDPKKEESPLALPPPQQVQGESSQD--------LPK 943

Query: 796  DVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQE 975
            D +++ +HP + +IG+   GV+TRS  +       FISQIEPK++  AL D +WI  MQE
Sbjct: 944  DWKFVINHPQDQIIGNPSSGVRTRSSLRNICNNLAFISQIEPKNIKDALVDENWIIVMQE 1003

Query: 976  ELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            ELNQFER++VWEL+ RP +Q+VIGT+WVFRNKM+E G ++RNKARLVA+G+ QEE
Sbjct: 1004 ELNQFERSEVWELMPRPQNQSVIGTRWVFRNKMDENGIIIRNKARLVAQGFNQEE 1058



 Score =  169 bits (428), Expect(2) = 5e-92
 Identities = 81/146 (55%), Positives = 100/146 (68%)
 Frame = +2

Query: 2    MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
            + +K E   +  +   ++QNEK  TI  IRSD G EF N     YC E+GI H  SA RT
Sbjct: 692  LSQKNEAFYEFSKFCNKVQNEKGFTITCIRSDHGREFENIDFEGYCNEHGINHNFSAPRT 751

Query: 182  PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
            PQQNGV ER+NRTL+E ARTML E  LPK FWAEA+NT+CY  NR ++   L KTP E+W
Sbjct: 752  PQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAVNTSCYVLNRILLRPILKKTPCELW 811

Query: 362  TGRKPNVAYFRIFGCKCFIHNNGKDN 439
              +KPN++YF++FGCKCFI N  KDN
Sbjct: 812  KNKKPNISYFKVFGCKCFILNT-KDN 836


>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1533

 Score =  193 bits (490), Expect(2) = 6e-92
 Identities = 109/234 (46%), Positives = 142/234 (60%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAKADE IFLGYS  SKAYR+ NKRT+V EES+HVVFDE N               
Sbjct: 891  LGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESN--------------- 935

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
               Q++   E E      D  E+ + Q  LEN     ++ + +S +  ++      L  +
Sbjct: 936  --KQETRQTEVE------DLTELLD-QSLLEN---EPNDVSKESESHVKQKETCEQLPKE 983

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             +  RD   + +IG I +GV TRS  +       F+SQ+EPK++ +AL D HW+ AMQEE
Sbjct: 984  WKTTRDLSMDNIIGSIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEE 1043

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQFERN+VW+LV  P    +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 1044 LNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 1097



 Score =  174 bits (440), Expect(2) = 6e-92
 Identities = 79/145 (54%), Positives = 102/145 (70%)
 Frame = +2

Query: 2    MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
            +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 745  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 804

Query: 182  PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
            PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINTAC+  N+ +I   L KTPYEI+
Sbjct: 805  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 864

Query: 362  TGRKPNVAYFRIFGCKCFIHNNGKD 436
             G+KPN++YFR+FGCKC++ NNGK+
Sbjct: 865  KGKKPNISYFRVFGCKCYVLNNGKE 889


>gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 676

 Score =  195 bits (495), Expect(2) = 1e-91
 Identities = 107/237 (45%), Positives = 141/237 (59%), Gaps = 3/237 (1%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGE---DIEESADK 609
            L  FDAKADE IFLGYS  SKAYR+ NKRT+V EES+HVVFDE N       +IE   + 
Sbjct: 378  LGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRKIEIEYLTEL 437

Query: 610  LNHPTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLL 789
            L+ P ++  P  E +    +   +++ E+ +QL                           
Sbjct: 438  LDQPLLENEPNEEPKE---SQSHEKVRETSEQLPK------------------------- 469

Query: 790  QPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAM 969
              + +  RD   + +IG+I +GV TRS  +       F+SQ+EPK + +AL D HW+ AM
Sbjct: 470  --EWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAM 527

Query: 970  QEELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            QEELNQFERN+VW+LV  P    +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 528  QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 584



 Score =  171 bits (433), Expect(2) = 1e-91
 Identities = 78/145 (53%), Positives = 101/145 (69%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 232 LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNLMFQKFCQEHGINHNFSAPRT 291

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINT C+  N+ +I   L KTPY+I+
Sbjct: 292 PQQNGVVERKNRSLEELARTMLNEIKLPKYFWADAINTTCHVLNKVLIRPILKKTPYKIY 351

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKD 436
            GRKPN++YFR+FGCKC++ NNGK+
Sbjct: 352 NGRKPNISYFRVFGCKCYVLNNGKE 376


>gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1006

 Score =  195 bits (496), Expect(2) = 2e-90
 Identities = 110/235 (46%), Positives = 141/235 (60%), Gaps = 1/235 (0%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAKADE IFLGYS  SK+YR+ NKRT+V EES+HVVFDE N   E IE+  + L+ 
Sbjct: 368  LGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEESVHVVFDESNKQTE-IEDLTELLDQ 426

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLEN-LQLSDDERADQSNTAARRLNPANLLQP 795
            P ++  P         N    E    +K  E  +QL  + +A                  
Sbjct: 427  PLLESEP---------NEKSKESEPHEKARETCVQLPKEWKAS----------------- 460

Query: 796  DVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQE 975
                 RD   + +IG+I +GV TRS  +       F+SQ+EPK++ +AL D HW+ AMQE
Sbjct: 461  -----RDLSMDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQE 515

Query: 976  ELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            ELNQFERN+VW+LV  P    +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 516  ELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 570



 Score =  167 bits (422), Expect(2) = 2e-90
 Identities = 75/145 (51%), Positives = 100/145 (68%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 222 LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 281

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML +  LPK FWA+AINT+C+  N+ +I   L K PYEI+
Sbjct: 282 PQQNGVVERKNRSLEELARTMLNKTNLPKYFWADAINTSCHVLNKVLIRPILKKIPYEIY 341

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKD 436
            G+KPN++YFR+FGCKC++ NNG +
Sbjct: 342 KGKKPNISYFRVFGCKCYVLNNGNE 366


>gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 588

 Score =  191 bits (484), Expect(2) = 3e-90
 Identities = 104/237 (43%), Positives = 139/237 (58%), Gaps = 3/237 (1%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIEESADK 609
            L  FDAK DE IFLGYS  SKAYR+ NKRT+V EES+HVVFDE N       +IE+  + 
Sbjct: 368  LGKFDAKVDEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTEL 427

Query: 610  LNHPTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLL 789
            L+ P ++     E +    N   ++  E+ +QL                           
Sbjct: 428  LDQPLLENEQNKEPKE---NESHEKARETSEQLPK------------------------- 459

Query: 790  QPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAM 969
              + +  RD   + +IG+I +GV TRS  +       F+SQ+EPK + +AL+D HW+ AM
Sbjct: 460  --EWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALNDEHWLMAM 517

Query: 970  QEELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            Q+ELNQFERN+VW+LV  P    +IGTKW FRNK++E G ++RNKARLVAKGY QEE
Sbjct: 518  QDELNQFERNQVWDLVPLPKGYPIIGTKWAFRNKLDESGIILRNKARLVAKGYNQEE 574



 Score =  171 bits (432), Expect(2) = 3e-90
 Identities = 78/144 (54%), Positives = 100/144 (69%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K +      +  K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RT
Sbjct: 222 LTNKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNMMFRKFCEEHGINHNFSAPRT 281

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NR+L+E ARTML E  LPK FWA+AINTAC+  N+ +I   L K PYEI+
Sbjct: 282 PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKIPYEIY 341

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGK 433
            G+KPN++YFR+FGCKC++ NNGK
Sbjct: 342 KGKKPNISYFRVFGCKCYVLNNGK 365


>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
          Length = 898

 Score =  191 bits (485), Expect(2) = 5e-90
 Identities = 110/233 (47%), Positives = 144/233 (61%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAK+D GIFLGYS  SK +RV NKRTMV EESIHV+F E N + ++ E   D L  
Sbjct: 476  LGKFDAKSDVGIFLGYSTSSKVFRVFNKRTMVVEESIHVIFYESNNSLQERESFDDDLGL 535

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
             T       E +     S ED     +K+   L L   +     ++          L  D
Sbjct: 536  ETSMGKLQIEDKRQQGKSGEDP----KKEESPLTLPPPQPVQGESSQD--------LPKD 583

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             +++ +HP + +IG+   GV+TRS  +       FI QIEPK++  A+ D +W+ AMQEE
Sbjct: 584  WKFVINHPQDQIIGNPXSGVRTRSSLRNICNNLAFIXQIEPKNIKDAIVDENWMIAMQEE 643

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQE 1137
            LNQFER++VWELV RP++Q+VIGTKWVFRNKM+E G +VRNKARLVA+GY QE
Sbjct: 644  LNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQE 696



 Score =  169 bits (429), Expect(2) = 5e-90
 Identities = 79/146 (54%), Positives = 101/146 (69%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           + +K E   +  +   ++QNEK  TI  IRSD G EF N    +YC ++GI H  SA RT
Sbjct: 331 LSQKSEAFYEFSKFCNKVQNEKGFTITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRT 390

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQNGV ER+NRTL+E ARTML E  LPK FWAE +NT+CY  +R ++   L KTPYE+W
Sbjct: 391 PQQNGVVERKNRTLQEMARTMLNENNLPKYFWAETVNTSCYVLSRILLRPILKKTPYELW 450

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKDN 439
             +KPN++YF++FGCKCFI N  KDN
Sbjct: 451 KNKKPNISYFKVFGCKCFILNT-KDN 475


>gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 570

 Score =  195 bits (496), Expect(2) = 1e-88
 Identities = 107/237 (45%), Positives = 142/237 (59%), Gaps = 3/237 (1%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIEESADK 609
            L  FDAKADE IFLGYS  SKAYR+ NKRT+V EES+HVVFDE N       +IE+  D 
Sbjct: 122  LGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTDL 181

Query: 610  LNHPTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLL 789
            L+ P             ++ S+ +   +  +  EN + + ++   +  T+          
Sbjct: 182  LDQP-------------LLESETNNKPKESESHENTKETSEQLPKEWKTS---------- 218

Query: 790  QPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAM 969
                   RD   + +IG+I +GV TRS  +       F+SQ+EPK + +AL D HW+ AM
Sbjct: 219  -------RDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAM 271

Query: 970  QEELNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            QEELNQFERN+VW+LV  P    +IGTKWVFRNK++E G ++RNKARLVAKGY QEE
Sbjct: 272  QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEE 328



 Score =  160 bits (406), Expect(2) = 1e-88
 Identities = 74/120 (61%), Positives = 91/120 (75%)
 Frame = +2

Query: 77  IIKIRSDRGTEFVNGIITQYCIENGIGHELSAARTPQQNGVAERRNRTLKEAARTMLAEA 256
           I  IRSD G  F N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+E ARTML E 
Sbjct: 1   ITSIRSDHGGVFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLEELARTMLNET 60

Query: 257 GLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKD 436
            LPK FWA+AINTAC+  N+ +I   L KTPYEI+ GRKPN++YFR+FGCKCF+ NNGK+
Sbjct: 61  KLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVFGCKCFVLNNGKE 120


>gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan] gi|1012344001|gb|KYP55193.1| Retrovirus-related
            Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
          Length = 1530

 Score =  180 bits (456), Expect(2) = 5e-87
 Identities = 108/234 (46%), Positives = 135/234 (57%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAKADEG+F+GYSA SKAYRV NK T+  EESIHV FDE N+              
Sbjct: 895  LGKFDAKADEGVFIGYSAISKAYRVFNKSTLSVEESIHVTFDETNI-------------- 940

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
                       E G   +DEDEI +S  Q E  +L   ++    +T+         L  +
Sbjct: 941  ----------LEKGKSLNDEDEIGDSITQEEE-KLELQQKTPSEDTS---------LPKE 980

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             R  +D   + ++GDI +GV TR      +    F+SQIEP  V  AL D  WI AM +E
Sbjct: 981  WRKPKDLSLDNILGDINKGVSTRHSFNLLSDDMAFVSQIEPLCVEHALKDEFWIMAMHDE 1040

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQF+RN VW LV    + N+IGTKWVFRNK+NEEG +V+NKARLVAKGY Q+E
Sbjct: 1041 LNQFKRNDVWILVPFNKNMNIIGTKWVFRNKLNEEGVIVKNKARLVAKGYNQQE 1094



 Score =  171 bits (432), Expect(2) = 5e-87
 Identities = 79/132 (59%), Positives = 96/132 (72%)
 Frame = +2

Query: 41   LMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAARTPQQNGVAERRNRT 220
            + KRIQNEK   I  +RSD G EF N     +C ENGI H  S  RTPQQNGV ER+NR+
Sbjct: 762  ISKRIQNEKDLKIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVVERKNRS 821

Query: 221  LKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIWTGRKPNVAYFRIF 400
            L E AR ML E GLPK FWA+A+NTACY  NR +I   L KTPYE++ GRKP++++F++F
Sbjct: 822  LIELARAMLNENGLPKYFWADAVNTACYVLNRILIRPILKKTPYELYKGRKPDISHFKVF 881

Query: 401  GCKCFIHNNGKD 436
            GCKCF+ NNGKD
Sbjct: 882  GCKCFVLNNGKD 893


>gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan] gi|1012326694|gb|KYP38474.1| Retrovirus-related
            Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
          Length = 1482

 Score =  180 bits (456), Expect(2) = 5e-87
 Identities = 108/234 (46%), Positives = 135/234 (57%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L  FDAKADEG+F+GYSA SKAYRV NK T+  EESIHV FDE N+              
Sbjct: 847  LGKFDAKADEGVFIGYSAISKAYRVFNKSTLSVEESIHVTFDETNI-------------- 892

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
                       E G   +DEDEI +S  Q E  +L   ++    +T+         L  +
Sbjct: 893  ----------LEKGKSLNDEDEIGDSITQEEE-KLELQQKTPSEDTS---------LPKE 932

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             R  +D   + ++GDI +GV TR      +    F+SQIEP  V  AL D  WI AM +E
Sbjct: 933  WRKPKDLSLDNILGDINKGVSTRHSFNLLSDDMAFVSQIEPLCVEHALKDEFWIMAMHDE 992

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQF+RN VW LV    + N+IGTKWVFRNK+NEEG +V+NKARLVAKGY Q+E
Sbjct: 993  LNQFKRNDVWILVPFNKNMNIIGTKWVFRNKLNEEGVIVKNKARLVAKGYNQQE 1046



 Score =  171 bits (432), Expect(2) = 5e-87
 Identities = 79/132 (59%), Positives = 96/132 (72%)
 Frame = +2

Query: 41   LMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAARTPQQNGVAERRNRT 220
            + KRIQNEK   I  +RSD G EF N     +C ENGI H  S  RTPQQNGV ER+NR+
Sbjct: 714  ISKRIQNEKDLKIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVVERKNRS 773

Query: 221  LKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIWTGRKPNVAYFRIF 400
            L E AR ML E GLPK FWA+A+NTACY  NR +I   L KTPYE++ GRKP++++F++F
Sbjct: 774  LIELARAMLNENGLPKYFWADAVNTACYVLNRILIRPILKKTPYELYKGRKPDISHFKVF 833

Query: 401  GCKCFIHNNGKD 436
            GCKCF+ NNGKD
Sbjct: 834  GCKCFVLNNGKD 845


>gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 766

 Score =  180 bits (457), Expect(2) = 8e-87
 Identities = 104/234 (44%), Positives = 142/234 (60%)
 Frame = +1

Query: 439  LKAFDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIEESADKLNH 618
            L+ FDAK+D+G F+GYS  SKAYRV N RT+V EESIHV F++      ++ +  D    
Sbjct: 164  LEKFDAKSDKGFFIGYSETSKAYRVYNSRTLVVEESIHVKFNDKKETDRELSDLEDD--- 220

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
                   +A  E    +S +DE   S+   E LQ + + + D        + P +  + +
Sbjct: 221  -------FAGMELNTHDSRKDEQV-SEASSEPLQTNVESQTD--------MIPPH--KSE 262

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             R+   HP E +IG   EGVKTRS+ +        +S+IEPK + +AL D  WI AMQEE
Sbjct: 263  WRYKSHHPKEQIIGSTSEGVKTRSKFRHLNSLA-LLSEIEPKSIDEALHDEGWILAMQEE 321

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQF R+ VW LV +P  + +IGTKWVFRNK++EEG V+RNKARLVA+GY Q+E
Sbjct: 322  LNQFARSDVWTLVPKPHGKTIIGTKWVFRNKLSEEGKVIRNKARLVAQGYNQQE 375



 Score =  169 bits (429), Expect(2) = 8e-87
 Identities = 79/142 (55%), Positives = 95/142 (66%)
 Frame = +2

Query: 11  KKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAARTPQQ 190
           K ET +      K++QNEK   I  I+SD G EF N     +C ENGI H  S ARTPQQ
Sbjct: 22  KDETFKNFTIFCKKVQNEKGFCISVIKSDHGGEFENANFEMFCDENGISHNFSVARTPQQ 81

Query: 191 NGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIWTGR 370
           NGV ER+NR+L+E  RTML    LP+ FWAEAINTACY QNR ++   L +TPYE+W GR
Sbjct: 82  NGVVERKNRSLQEMGRTMLNSCNLPRSFWAEAINTACYLQNRILVRPILKRTPYELWKGR 141

Query: 371 KPNVAYFRIFGCKCFIHNNGKD 436
           KPN++YF  FGC+CFI N   D
Sbjct: 142 KPNISYFHPFGCECFILNTKDD 163


>gb|KYP55908.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 762

 Score =  181 bits (459), Expect(2) = 2e-85
 Identities = 99/234 (42%), Positives = 139/234 (59%), Gaps = 3/234 (1%)
 Frame = +1

Query: 448  FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGE---DIEESADKLNH 618
            FDAKADE IFLGYS  SKAY+V NKRT++ EES+HVVFDE N       +I++  D L+ 
Sbjct: 382  FDAKADETIFLGYSTNSKAYKVYNKRTLIVEESVHVVFDETNKQETKQIEIQDLTDLLDQ 441

Query: 619  PTMQKSPYAEAEAGIINSDEDEIAESQKQLENLQLSDDERADQSNTAARRLNPANLLQPD 798
            P ++  P                +E  K+ E+++ +                 +  L  +
Sbjct: 442  PPLESEP----------------SEKPKESESIETTK--------------KTSEQLPKE 471

Query: 799  VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEE 978
             +  +D   E +IG+I +GV TR   +       F+SQ++PK +++AL D HW+ AMQEE
Sbjct: 472  WKTSKDLSIENIIGNIAKGVSTRRSIKNICNTMAFVSQVKPKIINEALHDEHWLMAMQEE 531

Query: 979  LNQFERNKVWELVQRPTHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEE 1140
            LNQFERN+VW+LV   +   +IGTKW+FRNK++E   ++RNKA LVAKGY QEE
Sbjct: 532  LNQFERNEVWDLVPLLSDYPIIGTKWIFRNKLDESRIIIRNKAMLVAKGYNQEE 585



 Score =  164 bits (414), Expect(2) = 2e-85
 Identities = 76/145 (52%), Positives = 96/145 (66%)
 Frame = +2

Query: 2   MCKKKETLQKLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIGHELSAART 181
           +  K E      +  K +QNEK+  I  IRSD G EF N +  + C E+ I H  SA RT
Sbjct: 233 LANKSEAFNDFKKFAKLVQNEKNTNITSIRSDHGGEFQNVLFQKICEEHDINHNFSAPRT 292

Query: 182 PQQNGVAERRNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQNRCMINRQLTKTPYEIW 361
           PQQN V ER+NR+L+E ARTML E  LPK FWA+ INT C+  N+ +I   L K PYEI+
Sbjct: 293 PQQNVVVERKNRSLEELARTMLNETKLPKHFWADTINTTCHVLNKVLIRPILKKIPYEIY 352

Query: 362 TGRKPNVAYFRIFGCKCFIHNNGKD 436
            GRKP ++YFR+FGCKCF+ NNGK+
Sbjct: 353 NGRKPKISYFRVFGCKCFVLNNGKE 377