BLASTX nr result
ID: Rehmannia27_contig00017838
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00017838
(583 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 296 2e-92
gb|AFB73911.1| polyprotein [Citrus sinensis] 293 1e-91
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo... 287 5e-90
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 286 9e-90
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 286 9e-90
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 286 9e-90
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo... 286 9e-90
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 280 7e-87
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 280 7e-87
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 278 2e-86
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 277 6e-86
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 278 8e-86
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 271 1e-81
gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna a... 214 2e-67
emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera] 214 1e-66
emb|CAN79459.1| hypothetical protein VITISV_004379 [Vitis vinifera] 212 3e-64
gb|KYP60297.1| Retrovirus-related Pol polyprotein from transposo... 201 5e-63
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 219 6e-63
gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposo... 209 2e-62
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 218 3e-62
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 296 bits (758), Expect(2) = 2e-92
Identities = 146/156 (93%), Positives = 151/156 (96%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
KILRRFNMQDCK +STPLP+NFKLSSSMCPSNEAER+EMSRVPYASAVGSLMFAMICTRP
Sbjct: 1049 KILRRFNMQDCKSISTPLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRP 1108
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVGAVSRYMANPG EHW VKRILRYIRGTS+VALCYGGS+FTVRGYVDSDFAGDL
Sbjct: 1109 DIAQAVGAVSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGGSEFTVRGYVDSDFAGDL 1168
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAG AVSWVSKLQTVVALSTTEAE
Sbjct: 1169 DKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAE 1204
Score = 70.9 bits (172), Expect(2) = 2e-92
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+WIQRLLEELGHKQ+KI +FCDSQSA
Sbjct: 1206 MAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSA 1241
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 293 bits (751), Expect(2) = 1e-91
Identities = 145/156 (92%), Positives = 149/156 (95%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
KILRRFNMQDCK +ST LP+NFKLSSSMCPSNEAER+EMSRVPYASAVGSLMFAMICTRP
Sbjct: 1049 KILRRFNMQDCKSISTSLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRP 1108
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVG VSRYMANPG EHW VKRILRYIRGTSDVALCYGGS+FTVRGYVDSDFAGDL
Sbjct: 1109 DIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGGSEFTVRGYVDSDFAGDL 1168
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAG AVSWVSKLQTVVALSTTEAE
Sbjct: 1169 DKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAE 1204
Score = 70.5 bits (171), Expect(2) = 1e-91
Identities = 31/36 (86%), Positives = 36/36 (100%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACK+A+WIQRLLEELGHKQ+KI++FCDSQSA
Sbjct: 1206 MAATQACKKAIWIQRLLEELGHKQQKILVFCDSQSA 1241
>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 287 bits (734), Expect(2) = 5e-90
Identities = 139/156 (89%), Positives = 150/156 (96%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+N+KLSSSM PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 1045 KVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1104
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVGAVSR+MA+PGREHW VKRILRYI+GTSDVALC+ GS+F VRGYVDSDFAGDL
Sbjct: 1105 DIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFVVRGYVDSDFAGDL 1164
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1165 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1200
Score = 71.6 bits (174), Expect(2) = 5e-90
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+WIQRLLEELGHKQEKI ++CDSQSA
Sbjct: 1202 MAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSA 1237
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 286 bits (732), Expect(2) = 9e-90
Identities = 139/156 (89%), Positives = 150/156 (96%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+N+KLSSSM PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 1045 KVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1104
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVGAVSR+MA+PGREHW VKRILRYI+GTSDVALC+ GS+F VRGYVDSDFAGDL
Sbjct: 1105 DIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSDFAGDL 1164
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1165 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1200
Score = 71.6 bits (174), Expect(2) = 9e-90
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+WIQRLLEELGHKQEKI ++CDSQSA
Sbjct: 1202 MAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSA 1237
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 286 bits (732), Expect(2) = 9e-90
Identities = 139/156 (89%), Positives = 150/156 (96%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+N+KLSSSM PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 996 KVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1055
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVGAVSR+MA+PGREHW VKRILRYI+GTSDVALC+ GS+F VRGYVDSDFAGDL
Sbjct: 1056 DIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSDFAGDL 1115
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1116 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1151
Score = 71.6 bits (174), Expect(2) = 9e-90
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+WIQRLLEELGHKQEKI ++CDSQSA
Sbjct: 1153 MAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSA 1188
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 286 bits (732), Expect(2) = 9e-90
Identities = 139/156 (89%), Positives = 150/156 (96%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+N+KLSSSM PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 996 KVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1055
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVGAVSR+MA+PGREHW VKRILRYI+GTSDVALC+ GS+F VRGYVDSDFAGDL
Sbjct: 1056 DIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSDFAGDL 1115
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1116 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1151
Score = 71.6 bits (174), Expect(2) = 9e-90
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+WIQRLLEELGHKQEKI ++CDSQSA
Sbjct: 1153 MAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSA 1188
>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 286 bits (732), Expect(2) = 9e-90
Identities = 139/156 (89%), Positives = 150/156 (96%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+N+KLSSSM PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 996 KVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1055
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVGAVSR+MA+PGREHW VKRILRYI+GTSDVALC+ GS+F VRGYVDSDFAGDL
Sbjct: 1056 DIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSDFAGDL 1115
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1116 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1151
Score = 71.6 bits (174), Expect(2) = 9e-90
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+WIQRLLEELGHKQEKI ++CDSQSA
Sbjct: 1153 MAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSA 1188
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 280 bits (716), Expect(2) = 7e-87
Identities = 134/156 (85%), Positives = 148/156 (94%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 1045 KVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1104
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVG VSR+MA+PG+EHW+ VKRI+RYI+GTS VA+C+GGS+ TVRGYVDSDFAGD
Sbjct: 1105 DIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDH 1164
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1165 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1200
Score = 68.2 bits (165), Expect(2) = 7e-87
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+W+QRL+EELGHKQE+I ++CDSQSA
Sbjct: 1202 MAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSA 1237
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 280 bits (716), Expect(2) = 7e-87
Identities = 134/156 (85%), Positives = 148/156 (94%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 1045 KVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1104
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVG VSR+MA+PG+EHW+ VKRI+RYI+GTS VA+C+GGS+ TVRGYVDSDFAGD
Sbjct: 1105 DIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDH 1164
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1165 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1200
Score = 68.2 bits (165), Expect(2) = 7e-87
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+W+QRL+EELGHKQE+I ++CDSQSA
Sbjct: 1202 MAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSA 1237
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 278 bits (712), Expect(2) = 2e-86
Identities = 133/156 (85%), Positives = 147/156 (94%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 1045 KVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1104
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVG VSR+MA+PG+EHW+ VKRI+RYI+GTS VA+C+GGS+ TVRGYVDSDFAGD
Sbjct: 1105 DIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDH 1164
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTL GGAVSW+SKLQTVVALSTTEAE
Sbjct: 1165 DKRKSTTGYVFTLTGGAVSWLSKLQTVVALSTTEAE 1200
Score = 68.2 bits (165), Expect(2) = 2e-86
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+W+QRL+EELGHKQE+I ++CDSQSA
Sbjct: 1202 MAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSA 1237
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 277 bits (708), Expect(2) = 6e-86
Identities = 133/156 (85%), Positives = 147/156 (94%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQDCKP+STPLP+NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 1045 KVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRP 1104
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVG VSR+MA+PG+EHW+ VKRI+RYI+GTS VA+C+GGS+ TV GYVDSDFAGD
Sbjct: 1105 DIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDH 1164
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1165 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1200
Score = 68.2 bits (165), Expect(2) = 6e-86
Identities = 29/36 (80%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+W+QRL+EELGHKQE+I ++CDSQSA
Sbjct: 1202 MAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSA 1237
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 278 bits (712), Expect(2) = 8e-86
Identities = 134/156 (85%), Positives = 148/156 (94%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+LRRFNMQD P+STPLP+N+KLSSSM PS+EAER EMSRVPYASAVGSLM+AMICTRP
Sbjct: 1045 KVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRP 1104
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVG VSR+MA+PG+EHW+ VKRILRYIRGTS ALC+GGS+FT+RGYVDSDFAGDL
Sbjct: 1105 DIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGSEFTIRGYVDSDFAGDL 1164
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DKRKSTTGYVFTLAGGAVSW+SKLQTVVALSTTEAE
Sbjct: 1165 DKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAE 1200
Score = 66.2 bits (160), Expect(2) = 8e-86
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+W QRLLEELGHKQ+KI ++CDS SA
Sbjct: 1202 MAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSA 1237
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 271 bits (692), Expect(2) = 1e-81
Identities = 133/156 (85%), Positives = 141/156 (90%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
KIL RF+MQDCK +STPLPIN K+SSSM PSNE R EMSRVPYASAVGSLMFAMICTRP
Sbjct: 1038 KILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRP 1097
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIAQAVG VSRYMANPGREHW+ VKRILRYI+GTSDVALCYGGSDF + GYVDSD+AGDL
Sbjct: 1098 DIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIINGYVDSDYAGDL 1157
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
DK KSTTGYVF +AGGAVSWVSKLQ VVA STTEAE
Sbjct: 1158 DKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAE 1193
Score = 59.7 bits (143), Expect(2) = 1e-81
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
+AATQA KEA+W++ LLEELGHKQE + LFCDSQSA
Sbjct: 1195 VAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSA 1230
>gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
Length = 225
Score = 214 bits (544), Expect(2) = 2e-67
Identities = 103/119 (86%), Positives = 112/119 (94%)
Frame = +2
Query: 113 EMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDV 292
E+SRVPYASAVGSLM+AMICTRPDIA AVGAVSR+MANPG EHW+ VKR+LRYI+GTSDV
Sbjct: 2 EISRVPYASAVGSLMYAMICTRPDIAHAVGAVSRFMANPGEEHWNAVKRVLRYIKGTSDV 61
Query: 293 ALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
ALC+GGS F VRGYVDSD+AGDLDKRKSTTGYVF LAGG VSW+SKLQTVVALSTTEAE
Sbjct: 62 ALCFGGSKFIVRGYVDSDYAGDLDKRKSTTGYVFKLAGGVVSWLSKLQTVVALSTTEAE 120
Score = 69.7 bits (169), Expect(2) = 2e-67
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQSA 582
MAATQACKEA+WIQRLLEELGHKQ KI ++CDSQSA
Sbjct: 122 MAATQACKEAIWIQRLLEELGHKQNKITVYCDSQSA 157
>emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera]
Length = 281
Score = 214 bits (545), Expect = 1e-66
Identities = 98/156 (62%), Positives = 122/156 (78%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+L RFNM + KPVSTPL +FKLS P E ER MS+VPYASA+GSLM+AM+CTRP
Sbjct: 22 KVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRP 81
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIA AVG VSR+M+ PG++HW+ VK ILRY++G+ D LC+ G+ ++GYVD+DFAGD+
Sbjct: 82 DIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDI 141
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
D RKSTTG+VFTL G +SW S LQ +V LSTTEAE
Sbjct: 142 DSRKSTTGFVFTLGGTVISWTSNLQKIVTLSTTEAE 177
>emb|CAN79459.1| hypothetical protein VITISV_004379 [Vitis vinifera]
Length = 409
Score = 212 bits (539), Expect = 3e-64
Identities = 98/156 (62%), Positives = 122/156 (78%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+L RFNM + KPVSTPL +FKLS P E ER MS+VPYASA+GSLM+AM+CTRP
Sbjct: 158 KVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDXMSKVPYASAIGSLMYAMVCTRP 217
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIA AVG VSR+M+ G++HW+ VK ILRY++G+ D LC+ G+ ++GYVD+DFAGD+
Sbjct: 218 DIAHAVGVVSRFMSRXGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDI 277
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
D RKSTTG+VFTL G A+SW S LQ +V LSTTEAE
Sbjct: 278 DSRKSTTGFVFTLGGTAISWXSNLQKIVTLSTTEAE 313
>gb|KYP60297.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 183
Score = 201 bits (512), Expect = 5e-63
Identities = 96/149 (64%), Positives = 116/149 (77%)
Frame = +2
Query: 23 MQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVG 202
M++ K VSTPL +FKLS PSNEAE+ EM RVPYAS VGSLM+AM+CTRPDIA A+G
Sbjct: 1 MENAKAVSTPLATHFKLSVKQSPSNEAEKLEMERVPYASTVGSLMYAMVCTRPDIAYAIG 60
Query: 203 AVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTT 382
VSR+++NPGREHW+ VK I+RY+ GT D+ LC+GG T+ GY DSD AGD+D RKST
Sbjct: 61 TVSRFLSNPGREHWNAVKWIMRYLHGTVDMKLCFGGDKPTLVGYSDSDMAGDVDSRKSTL 120
Query: 383 GYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
GY+ AGGAV+W S+LQ VALSTTE E
Sbjct: 121 GYLIKFAGGAVAWQSRLQRCVALSTTEVE 149
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 219 bits (559), Expect = 6e-63
Identities = 103/156 (66%), Positives = 125/156 (80%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
K+L RF+M + KPVSTPL ++FKL CPS+E E+ EM RVPY+SAVGSLM+AM+CTRP
Sbjct: 1066 KVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRP 1125
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIA AVG VSR+++NPGREHWD VK ILRY+RGTS ++LC+G + GY DSD AGD+
Sbjct: 1126 DIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYTDSDMAGDI 1185
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
D RKST+GY+ T AGGAVSW S+LQ V LSTTEAE
Sbjct: 1186 DTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAE 1221
>gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 478
Score = 209 bits (532), Expect = 2e-62
Identities = 101/155 (65%), Positives = 123/155 (79%)
Frame = +2
Query: 5 ILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPD 184
+L+RF+M++ K VSTPL +FKLS CPSNE E+ MSRVPYA AVGSLM+AM+CTRPD
Sbjct: 266 VLQRFHMENVKAVSTPLAAHFKLSVKQCPSNEVEKINMSRVPYAYAVGSLMYAMVCTRPD 325
Query: 185 IAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLD 364
IA AVG VSR+++NPGREHW+ VK ILRY+RGTS + L +GG T+ GY DSD AGD+D
Sbjct: 326 IAHAVGTVSRFLSNPGREHWNAVKWILRYLRGTSGLKLYFGGDKPTLVGYSDSDMAGDID 385
Query: 365 KRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
RKST+GY+ AGG V+W S+LQ VALSTTEAE
Sbjct: 386 SRKSTSGYLVKFAGGVVAWQSRLQKCVALSTTEAE 420
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 218 bits (554), Expect = 3e-62
Identities = 100/156 (64%), Positives = 127/156 (81%)
Frame = +2
Query: 2 KILRRFNMQDCKPVSTPLPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRP 181
++L RFNM++ KPVSTPL + KLS MCP+ E+ M++VPY+SAVGSLM+AM+CTRP
Sbjct: 1068 RVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRP 1127
Query: 182 DIAQAVGAVSRYMANPGREHWDTVKRILRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDL 361
DIA AVG VSR++ NPG+EHW+ VK ILRY+RGT+ LC+GGSD ++GY D+D AGD+
Sbjct: 1128 DIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDI 1187
Query: 362 DKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAE 469
D RKS+TGY+FT +GGA+SW SKLQ VALSTTEAE
Sbjct: 1188 DNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAE 1223