BLASTX nr result

ID: Rehmannia27_contig00017519 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00017519
         (812 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17911.1| unnamed protein product [Coffea canephora]             72   5e-11
ref|XP_009627941.1| PREDICTED: F-box/kelch-repeat protein At3g23...    62   2e-07
ref|XP_009762231.1| PREDICTED: F-box protein At3g08750-like [Nic...    61   3e-07
ref|XP_009773459.1| PREDICTED: putative F-box protein At1g32420 ...    59   2e-06
ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   8e-06

>emb|CDP17911.1| unnamed protein product [Coffea canephora]
          Length = 419

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 35/109 (32%), Positives = 61/109 (55%)
 Frame = -3

Query: 786 GVKLIDWNDTLGALVCTKGNERVESLDVWVFDDGEQIWTKNHTFGPIEVNVDKFLHFSKN 607
           G + ++W  +L  LV +   ER + +DV V+D+G+  W      GPI + +++ +  SK+
Sbjct: 289 GGRFVEWKGSLAILVYSPTRERDDFVDVVVYDEGKGRWDTKSCHGPIGLKMERHMQCSKD 348

Query: 606 GKILGKRLDDKLFVFDPKTGCVKVLFYDDKPIQSYEIYGYSESLAYIEG 460
           G IL +  +  LF++DP T  +K     +    SYE + Y+ESL  ++G
Sbjct: 349 GVILAETPEGTLFLYDPVTNAIKEFRIAEAMKTSYEAFSYTESLVSLKG 397


>ref|XP_009627941.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           tomentosiformis]
          Length = 418

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
 Frame = -3

Query: 780 KLIDWNDTLGALVCTKGNERVES-LDVWVFDDGEQIWTKNHTFGPIEVNVDKFLHFSKNG 604
           +L+  +D LG L     +ER ES  DVWV DD E  WTK +  GP+ + +++ +   +NG
Sbjct: 288 QLVVLDDFLGKLTF---DERDESHFDVWVMDD-EDGWTKKYKVGPL-LGLERTMGCLRNG 342

Query: 603 KILGKRLDDKLFVFDPKTGCVKV-LFYDDKPIQSYEIYGYSESLAYIEG 460
            I+ K  ++ +F+FDP T  VK  L  D     +Y I+ YSESL  I G
Sbjct: 343 DIVAKNKEEVVFLFDPVTCSVKANLSIDSSKNGAYMIFDYSESLMLIGG 391


>ref|XP_009762231.1| PREDICTED: F-box protein At3g08750-like [Nicotiana sylvestris]
          Length = 418

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
 Frame = -3

Query: 780 KLIDWNDTLGALVCTKGNERVES-LDVWVFDDGEQIWTKNHTFGPIEVNVDKFLHFSKNG 604
           +L+   D+LG       +ER ES  DVWV DD E  WTK +  GPI   +++ +   +NG
Sbjct: 288 QLVVLGDSLGKFTF---DERDESHFDVWVMDD-EDGWTKKYNVGPIH-GLERTMGCLRNG 342

Query: 603 KILGKRLDDKLFVFDPKTGCVKV-LFYDDKPIQSYEIYGYSESLAYIEG 460
            I+ K  ++++F+FDP T  VK  L  D     +Y I+ YSESL    G
Sbjct: 343 DIVAKNKEEEVFLFDPVTCSVKANLSIDSSKNGAYMIFDYSESLMLTGG 391


>ref|XP_009773459.1| PREDICTED: putative F-box protein At1g32420 [Nicotiana sylvestris]
          Length = 416

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = -3

Query: 777 LIDWNDTLGALVCTKGNERVESLDVWVFDDGEQIWTKNHTFGPIEVNVDKFLHFSKNGKI 598
           L++  D+LG L+  K ++   ++D+WV DD E  W+K    G +    D+ +   +NG I
Sbjct: 284 LVNLEDSLGMLMWEKADKY--NVDIWVMDD-EDGWSKKRNVGVL-FGFDRIIGCLRNGNI 339

Query: 597 LGKRLDDKLFVFDPKTGCVKV-LFYDDKPIQSYEIYGYSESLAYIEG 460
           +    +  LF+FDP T  VK  L  D+    S  I+ YSESL  IEG
Sbjct: 340 VAYDENGVLFLFDPMTSSVKAKLCIDNANSGSSMIFNYSESLVLIEG 386


>ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           pennellii]
          Length = 426

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -3

Query: 711 LDVWVFDDGEQIWTKNHTFGPIEVNVDKFLHFSKNGKILGKRLDDKLFVFDPKTGCVKVL 532
           +DVWV DD +  W+K ++ GP+ V  D+ L   +NG I+ K  +  +F+ DP T  VK  
Sbjct: 308 MDVWVMDDVDG-WSKKYSVGPL-VGFDRILGCLRNGDIVAKNENGVIFLCDPITNSVKEN 365

Query: 531 F-YDDKPIQSYEIYGYSESLAYIEG 460
           F  D+   +SY I  YSESL  I G
Sbjct: 366 FSIDNSKDESYVIVDYSESLFLIGG 390


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