BLASTX nr result

ID: Rehmannia27_contig00016660 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00016660
         (722 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA do...    91   1e-17
emb|CDP20800.1| unnamed protein product [Coffea canephora]             73   3e-11
emb|CBI21475.3| unnamed protein product [Vitis vinifera]               71   8e-11

>ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           1B-like [Sesamum indicum]
          Length = 525

 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 52/113 (46%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
 Frame = +1

Query: 166 GQISNSQSHYLSNPNPPSLQYMQPPGGITGPYDXXXXXXXXXXXXXXXXXXXXXXXXIQQ 345
           GQIS+SQ+HY S PNP SLQYMQP GGI G YD                        +  
Sbjct: 413 GQISSSQAHYHSIPNPTSLQYMQPSGGIAGSYDYGSLPPLPPGPPPPAPPSFMVSPMVPL 472

Query: 346 PQQMLTMGH---------XXXXXXXXXXXXXFRPLAPVQAPGMVYYTHPYRSQ 477
            QQ LTMGH                      FRPLAP+QAPGMVYYTHPY+SQ
Sbjct: 473 MQQPLTMGHQQSTLAQQQSIPISQPPPGPAGFRPLAPMQAPGMVYYTHPYQSQ 525


>emb|CDP20800.1| unnamed protein product [Coffea canephora]
          Length = 494

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 55/162 (33%), Positives = 66/162 (40%), Gaps = 3/162 (1%)
 Frame = +1

Query: 1   ASTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXGQ--I 174
           AS+SSQYIM+SVLSTFAAE+ KNAG           PA                     I
Sbjct: 334 ASSSSQYIMSSVLSTFAAEQEKNAGLTKSSTASTPYPALPNNATKNSEIKAEGTMLDPII 393

Query: 175 SNSQSHYLSNPNPPSLQYMQPPGGITGPYDXXXXXXXXXXXXXXXXXXXXXXXXIQQPQQ 354
           +NSQ+ Y     PPS QY+QP GG    Y                         +    Q
Sbjct: 394 TNSQAQYHLLSTPPSQQYIQPSGGTLSSYAYGSFPPLPPGPPPPPPPPAYMMSPMTPLTQ 453

Query: 355 MLTMGHXXXXXXXXXXXXXFRPLAPVQAP-GMVYYTHPYRSQ 477
                H             FRP+AP+Q P GMVYY HP+ +Q
Sbjct: 454 QQLQQH-TVPLPPPPPGPSFRPVAPMQQPTGMVYYAHPHHTQ 494


>emb|CBI21475.3| unnamed protein product [Vitis vinifera]
          Length = 473

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 57/159 (35%), Positives = 61/159 (38%)
 Frame = +1

Query: 1   ASTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXGQISN 180
           AS+SSQ IMTSVLSTFAAEEAKNAG                                   
Sbjct: 332 ASSSSQLIMTSVLSTFAAEEAKNAGLTKTSTVSNSFTPMPSNSKPENSM-------PTPT 384

Query: 181 SQSHYLSNPNPPSLQYMQPPGGITGPYDXXXXXXXXXXXXXXXXXXXXXXXXIQQPQQML 360
           SQ+ Y   PNPPS QY+QP GGI  PY                            PQQ  
Sbjct: 385 SQTQYHMLPNPPSQQYLQPSGGIMNPYGYGSIPPLPPGPPPPPSTLHMVNPMAPLPQQQ- 443

Query: 361 TMGHXXXXXXXXXXXXXFRPLAPVQAPGMVYYTHPYRSQ 477
                            FRPL   Q PGMVYY  P+ SQ
Sbjct: 444 ------SIPLQPPAPPSFRPL---QLPGMVYYGLPHHSQ 473


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