BLASTX nr result

ID: Rehmannia27_contig00015773 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00015773
         (843 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077074.1| PREDICTED: U11/U12 small nuclear ribonucleop...   193   5e-53
ref|XP_012834684.1| PREDICTED: U11/U12 small nuclear ribonucleop...   102   6e-21

>ref|XP_011077074.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
            [Sesamum indicum] gi|747061230|ref|XP_011077075.1|
            PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa
            protein [Sesamum indicum]
            gi|747061232|ref|XP_011077077.1| PREDICTED: U11/U12 small
            nuclear ribonucleoprotein 48 kDa protein [Sesamum
            indicum]
          Length = 767

 Score =  193 bits (490), Expect = 5e-53
 Identities = 120/242 (49%), Positives = 142/242 (58%), Gaps = 6/242 (2%)
 Frame = -1

Query: 843  GIGDTSKTMEKTEALESENLNTHTSATGVSGSRRNSEIPKENRERSLDYRKELHSFHDAE 664
            G+  TSK  E+  AL S+NLNT + A GVSG+   S+IP+E R +SLDYRK+ H+ HD++
Sbjct: 531  GVDGTSKAAEEMGALTSDNLNTGSRAAGVSGT---SQIPEEIRGQSLDYRKDSHARHDSK 587

Query: 663  GFEDDIKQLTRDSSWDHGRQGSNRSVERIRHDRDDYSGKRDGRQISSHSREPMHGGREKQ 484
              EDDI +L RDSSWDH RQ  N+SV R+RHD+DD     DGRQ  S SRE M  GRE Q
Sbjct: 588  KCEDDIHRLRRDSSWDHRRQDLNKSVGRVRHDKDDNYRSWDGRQSGSDSRERM-DGRENQ 646

Query: 483  DFA---AENYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSCKRERYEGNR 313
            +F     E Y                                     RTS KRERYE NR
Sbjct: 647  EFVEALGEGYSRRSRKRRSESRERDHHKISRDEHEFNNHKRERDQRERTSRKRERYEDNR 706

Query: 312  EHGDRGRSKTVSARREGDVDNGGHGDMRERKTNRNSSSRRELHKFEDRYDPAES---HED 142
            E  DRGRSKT  A R  D D GG+ D R+ KTNR+SSSR EL  F+DRYDPAES   +ED
Sbjct: 707  EREDRGRSKTERASRHRDED-GGYLDRRKSKTNRSSSSRLELQDFDDRYDPAESRDFYED 765

Query: 141  DF 136
            DF
Sbjct: 766  DF 767


>ref|XP_012834684.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
            [Erythranthe guttata] gi|848868089|ref|XP_012834685.1|
            PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa
            protein [Erythranthe guttata] gi|604335647|gb|EYU39535.1|
            hypothetical protein MIMGU_mgv1a022113mg [Erythranthe
            guttata]
          Length = 712

 Score =  102 bits (254), Expect = 6e-21
 Identities = 77/239 (32%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
 Frame = -1

Query: 843  GIGDTSKTMEKTEALESENLNTHTSATGVSGSRRNSEIPKENRERSLDYRKELHSFHDAE 664
            GIGD S  ++KTE+L SENLN            RNS++P E R +S+D          +E
Sbjct: 535  GIGDMSNAVKKTESLASENLN------------RNSKLPAEKRGKSVD----------SE 572

Query: 663  GFEDDIKQLTRDSSWDHGRQG-SNRSVERIRHDRDDYSGKRDGRQISSHSREPMHGGREK 487
             F DDI Q  +DS+ DH  Q    R   R     +DYS K   R+  S+ R+     R++
Sbjct: 573  DFGDDIHQPKKDSNRDHRHQDLDKRQTSRKETFAEDYSPKSHRRRSKSNERKYHKRERDE 632

Query: 486  QDFAAENYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSCKRERYEGNREH 307
             + A+ +                                       +  KRE+ E NRE+
Sbjct: 633  HERASSS---------------------------------------SRSKREKKEDNREY 653

Query: 306  GDRGRSKTVSARREGDVDNGGHGDMRERKTNRNSSSRRELHKFEDRYDPAESHE--DDF 136
             +RG+ +  S+ RE D D+G H + R  +T R+S SR EL + ED YDP  SH+  +DF
Sbjct: 654  ENRGKRRKDSSYRERDDDDGRHANRRRSRTERSSKSRYELDEIEDIYDPTVSHDSREDF 712


Top