BLASTX nr result

ID: Rehmannia27_contig00015772 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00015772
         (1374 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077074.1| PREDICTED: U11/U12 small nuclear ribonucleop...    96   1e-17
ref|XP_012834684.1| PREDICTED: U11/U12 small nuclear ribonucleop...    72   7e-10

>ref|XP_011077074.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
            [Sesamum indicum] gi|747061230|ref|XP_011077075.1|
            PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa
            protein [Sesamum indicum]
            gi|747061232|ref|XP_011077077.1| PREDICTED: U11/U12 small
            nuclear ribonucleoprotein 48 kDa protein [Sesamum
            indicum]
          Length = 767

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 52/74 (70%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
 Frame = -2

Query: 1259 TSRKRERYEDNREHGDRGRSKTDSAHRERDVDNGGHGDIRERKTNRNSSSRRELHKFEDR 1080
            TSRKRERYEDNRE  DRGRSKT+ A R RD D GG+ D R+ KTNR+SSSR EL  F+DR
Sbjct: 695  TSRKRERYEDNREREDRGRSKTERASRHRDED-GGYLDRRKSKTNRSSSSRLELQDFDDR 753

Query: 1079 YDPAESN---EDDF 1047
            YDPAES    EDDF
Sbjct: 754  YDPAESRDFYEDDF 767


>ref|XP_012834684.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
            [Erythranthe guttata] gi|848868089|ref|XP_012834685.1|
            PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa
            protein [Erythranthe guttata] gi|604335647|gb|EYU39535.1|
            hypothetical protein MIMGU_mgv1a022113mg [Erythranthe
            guttata]
          Length = 712

 Score = 72.0 bits (175), Expect = 7e-10
 Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = -2

Query: 1250 KRERYEDNREHGDRGRSKTDSAHRERDVDNGGHGDIRERKTNRNSSSRRELHKFEDRYDP 1071
            KRE+ EDNRE+ +RG+ + DS++RERD D+G H + R  +T R+S SR EL + ED YDP
Sbjct: 643  KREKKEDNREYENRGKRRKDSSYRERDDDDGRHANRRRSRTERSSKSRYELDEIEDIYDP 702

Query: 1070 AESNE--DDF 1047
              S++  +DF
Sbjct: 703  TVSHDSREDF 712


Top