BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00015677
         (598 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011083031.1| PREDICTED: rho-N domain-containing protein 1...   124   8e-31
ref|XP_012831232.1| PREDICTED: rho-N domain-containing protein 1...   100   1e-21
ref|XP_006351669.1| PREDICTED: rho-N domain-containing protein 1...    94   3e-19
ref|XP_015088732.1| PREDICTED: rho-N domain-containing protein 1...    92   1e-18
ref|XP_004246948.1| PREDICTED: rho-N domain-containing protein 1...    89   2e-17
ref|XP_012829061.1| PREDICTED: rho-N domain-containing protein 1...    88   3e-17
emb|CDP03750.1| unnamed protein product [Coffea canephora]             87   7e-17
ref|XP_009799855.1| PREDICTED: rho-N domain-containing protein 1...    85   5e-16
ref|XP_009614288.1| PREDICTED: rho-N domain-containing protein 1...    83   2e-15
ref|XP_012476275.1| PREDICTED: rho-N domain-containing protein 1...    80   3e-14
gb|KJB26011.1| hypothetical protein B456_004G221100, partial [Go...    80   3e-14
gb|KHG20039.1| SAP-like protein BP-73 [Gossypium arboreum]             78   1e-13
ref|XP_007050282.1| Rho termination factor, putative [Theobroma ...    77   3e-13
gb|KHG28019.1| SAP-like protein BP-73 [Gossypium arboreum]             75   2e-12
gb|KJB42274.1| hypothetical protein B456_007G146600 [Gossypium r...    74   3e-12
ref|XP_012490699.1| PREDICTED: rho-N domain-containing protein 1...    74   3e-12
ref|XP_010086623.1| SAP-like protein BP-73 [Morus notabilis] gi|...    74   5e-12
ref|XP_011028810.1| PREDICTED: rho-N domain-containing protein 1...    73   6e-12
ref|XP_002302043.1| hypothetical protein POPTR_0002s03890g [Popu...    73   6e-12
gb|KVI12370.1| Rho termination factor, N-terminal [Cynara cardun...    72   1e-11

>ref|XP_011083031.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic
           [Sesamum indicum]
          Length = 377

 Score =  124 bits (312), Expect = 8e-31
 Identities = 71/130 (54%), Positives = 86/130 (66%), Gaps = 11/130 (8%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEGSV-----------RKGISLEPETDDINEIKIE 148
           P+L RP+S+F +RSPVPEIKFQPVYS+GSV           RKGI LEPE DD++E+KIE
Sbjct: 238 PNLGRPRSSFRRRSPVPEIKFQPVYSDGSVNSVSENKLDYTRKGI-LEPEADDLHELKIE 296

Query: 149 SDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRALAKSR 328
           S++EPL  E N +                    +DE N VE SD+ GMKL ELR+LAKSR
Sbjct: 297 SNLEPLLLERNAFDEMSGDETSEIYASEHGDE-DDEHNLVEASDLSGMKLTELRSLAKSR 355

Query: 329 GMKGFSKLKK 358
           G+KGFSKLKK
Sbjct: 356 GVKGFSKLKK 365


>ref|XP_012831232.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic
           [Erythranthe guttata] gi|604348296|gb|EYU46451.1|
           hypothetical protein MIMGU_mgv1a008104mg [Erythranthe
           guttata]
          Length = 385

 Score =  100 bits (248), Expect = 1e-21
 Identities = 67/139 (48%), Positives = 78/139 (56%), Gaps = 19/139 (13%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYS-EGSV------------RKGISLEPETDDINEIK 142
           P L+RPKSNFSKRSPVPEIKF  VYS EGSV            RK ISLE E+ DI+   
Sbjct: 239 PPLTRPKSNFSKRSPVPEIKFPSVYSAEGSVTVNSSPDIVDGGRKAISLERESVDIDS-- 296

Query: 143 IESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXN------GEDEPNTVEVSDVRGMKLVE 304
            +S+ +PLF E NV+                          ++E       D+ GMK+ E
Sbjct: 297 -DSEADPLFQEENVFDEILEDEISEIYESEHEEEVVAVVAAKEEDVVGASDDLSGMKMTE 355

Query: 305 LRALAKSRGMKGFSKLKKN 361
           LRALAKSRGMKGFSKLKKN
Sbjct: 356 LRALAKSRGMKGFSKLKKN 374


>ref|XP_006351669.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic
           [Solanum tuberosum]
          Length = 381

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 12/131 (9%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEG------------SVRKGISLEPETDDINEIKI 145
           P ++RPKSNF +RSPVP IKFQP+Y EG             + + I L+ E   I   K+
Sbjct: 240 PFVNRPKSNFQRRSPVPRIKFQPIYHEGGTDYPAASSAPDKMEEDIHLDAELGQIPRSKV 299

Query: 146 ESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRALAKS 325
           +SD EP+FS+ +V+                  + ++E N V   ++  MKL ELRA+AKS
Sbjct: 300 DSDTEPIFSDKHVF-DEMADDDTAKMYESVDASDDEEHNQVGHDELAEMKLTELRAIAKS 358

Query: 326 RGMKGFSKLKK 358
           RG++G+SK+KK
Sbjct: 359 RGLRGYSKVKK 369


>ref|XP_015088732.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform
           X1 [Solanum pennellii]
          Length = 381

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSE------------GSVRKGISLEPETDDINEIKI 145
           P ++RPKSNF +RSPVP IKFQP+Y E            G + K I L+ E   I   K+
Sbjct: 240 PFVNRPKSNFQRRSPVPRIKFQPIYHEGGTDNPVASSATGKMEKDIHLDLELGQIPRSKV 299

Query: 146 ESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRALAKS 325
           +SD EP+FS+ +V+                  + ++E N V   ++  MKL ELRA+AKS
Sbjct: 300 DSDPEPIFSDKHVF-DEMAGDNTAKMYGSVDASDDEEHNHVGHDELAEMKLTELRAIAKS 358

Query: 326 RGMKGFSKLKK 358
           R ++G+SKLKK
Sbjct: 359 RSLRGYSKLKK 369


>ref|XP_004246948.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic
           [Solanum lycopersicum]
          Length = 381

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 12/131 (9%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEG------------SVRKGISLEPETDDINEIKI 145
           P ++RPKSNF +RSPVP IKFQP+Y EG             +   I L+ E   I   K+
Sbjct: 240 PFVNRPKSNFQRRSPVPRIKFQPIYHEGGTDNPVASSATDKMENDIHLDLELGQIPRSKV 299

Query: 146 ESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRALAKS 325
           +SD E +FS+ +V+                  + ++E N     ++  MKL ELRA+AKS
Sbjct: 300 DSDTETIFSDKHVF-DEMADDDTSKMYGSVDASDDEEHNHAGHDELAEMKLTELRAIAKS 358

Query: 326 RGMKGFSKLKK 358
           RG++G+SKLKK
Sbjct: 359 RGLRGYSKLKK 369


>ref|XP_012829061.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic-like
           [Erythranthe guttata]
          Length = 350

 Score = 87.8 bits (216), Expect = 3e-17
 Identities = 58/122 (47%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEGS--VRKGISLEPETDDINEIKIESDVEPLFSE 175
           P L+RPKS F KRSPVPEIKFQP+YSEGS  +   ++L PE D   E +IES V   F E
Sbjct: 237 PILTRPKSIFRKRSPVPEIKFQPIYSEGSDNLVPHVTLAPEAD--GETEIESGV---FDE 291

Query: 176 GNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRALAKSRGMKGFSKLK 355
                                   E E +  E  ++ GMK++ELR +AKSRG+KGFSKLK
Sbjct: 292 --------------ILEDEKSETYESEHDNGEGVNLSGMKMIELRVIAKSRGVKGFSKLK 337

Query: 356 KN 361
           KN
Sbjct: 338 KN 339


>emb|CDP03750.1| unnamed protein product [Coffea canephora]
          Length = 372

 Score = 87.0 bits (214), Expect = 7e-17
 Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 12/132 (9%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSE----------GSVRKGI--SLEPETDDINEIKI 145
           P +SRP+SNF +RSPVP +K +PV+S+           SV++G   SLEPE     +I  
Sbjct: 236 PVMSRPRSNFQRRSPVPLVKNEPVFSDEDAMSSVSRASSVQEGKKKSLEPEFGVGPDI-- 293

Query: 146 ESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRALAKS 325
           ESD EP FS+G+ +                      EP+  E S++  MKLVELRALAKS
Sbjct: 294 ESDTEPTFSDGDEFDEMSEDEISGIYDDDN--ENVQEPDADEYSNLSEMKLVELRALAKS 351

Query: 326 RGMKGFSKLKKN 361
           RG++GFSKLKK+
Sbjct: 352 RGLRGFSKLKKH 363


>ref|XP_009799855.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic-like
           [Nicotiana sylvestris]
          Length = 460

 Score = 85.1 bits (209), Expect = 5e-16
 Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 16/135 (11%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEG------------SVRKGISLEPETDDINEIKI 145
           P ++RPKSNF +RSPV   KFQPVY EG               K I L+PE   I + K+
Sbjct: 316 PVVNRPKSNFRRRSPVSRTKFQPVYHEGGTDNLVASTATDKTEKDIHLDPELGRIPKNKV 375

Query: 146 E----SDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRA 313
           +    SD EP+FS+ +V+                  + E++    E  ++  MKL ELRA
Sbjct: 376 DSSAHSDREPIFSDEDVFDEMADDDAAKMFENVDANDDEEQHQVGE--ELAEMKLTELRA 433

Query: 314 LAKSRGMKGFSKLKK 358
           +AKSRG+KG+SKLKK
Sbjct: 434 IAKSRGLKGYSKLKK 448


>ref|XP_009614288.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 380

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 16/135 (11%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEGSV------------RKGISLEPETDDINEIKI 145
           P ++RP SNF +RSPV   KFQPVY EG               K I L+PE   I + K+
Sbjct: 237 PVVNRPMSNFQRRSPVSRTKFQPVYHEGGTDNLVASTATDKTEKDIHLDPELGRILKNKV 296

Query: 146 ES----DVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRA 313
           +S    D+EP+FS+ +V+                  + E      E+++   MKL ELRA
Sbjct: 297 DSSAHSDIEPIFSDEDVFDEMADDDAAKMFENVDANDEEQHQVGEELAE---MKLTELRA 353

Query: 314 LAKSRGMKGFSKLKK 358
           +AKSRG+KG+SKLKK
Sbjct: 354 IAKSRGLKGYSKLKK 368


>ref|XP_012476275.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic-like
           [Gossypium raimondii]
          Length = 381

 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEGSV-----------RKGISL---EPETDDINEI 139
           P LSRP SNF K+SPVP++K+Q +YS+  +           ++ +SL    P  +D+ E+
Sbjct: 237 PSLSRPASNFRKKSPVPQMKYQTLYSDEEMVNSVTHVNSDRKRNLSLAKSHPAVNDVPEL 296

Query: 140 K--IESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRA 313
           +  +ES+ +P     ++Y                    ED    +E  D+  +KL ELRA
Sbjct: 297 EEELESESDPELESESIYQESDMLDELSEDESSDVDE-EDREQHIEHEDLSALKLPELRA 355

Query: 314 LAKSRGMKGFSKLKKN 361
           LAKSRG+KGFSK+KK+
Sbjct: 356 LAKSRGLKGFSKMKKS 371


>gb|KJB26011.1| hypothetical protein B456_004G221100, partial [Gossypium raimondii]
          Length = 407

 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEGSV-----------RKGISL---EPETDDINEI 139
           P LSRP SNF K+SPVP++K+Q +YS+  +           ++ +SL    P  +D+ E+
Sbjct: 263 PSLSRPASNFRKKSPVPQMKYQTLYSDEEMVNSVTHVNSDRKRNLSLAKSHPAVNDVPEL 322

Query: 140 K--IESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRA 313
           +  +ES+ +P     ++Y                    ED    +E  D+  +KL ELRA
Sbjct: 323 EEELESESDPELESESIYQESDMLDELSEDESSDVDE-EDREQHIEHEDLSALKLPELRA 381

Query: 314 LAKSRGMKGFSKLKKN 361
           LAKSRG+KGFSK+KK+
Sbjct: 382 LAKSRGLKGFSKMKKS 397


>gb|KHG20039.1| SAP-like protein BP-73 [Gossypium arboreum]
          Length = 381

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEGSV-----------RKGISL---EPETDDINEI 139
           P LSRP +NF K+SPVP++K+Q +YS+  +           ++ +SL    P  +D+ E+
Sbjct: 237 PSLSRPATNFRKKSPVPQMKYQTLYSDEEMVNSVTHVNSDRKRNLSLAKSHPAVNDVPEL 296

Query: 140 K--IESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRA 313
           +  +ES+ +P     ++Y                    ED    +E  D+  +KL  LRA
Sbjct: 297 EEELESESDPELESESIYQESDMLDELSEDESSDVDE-EDSEQHIEHEDLSALKLPGLRA 355

Query: 314 LAKSRGMKGFSKLKKN 361
           LAKSRG+KGFSK+KKN
Sbjct: 356 LAKSRGLKGFSKMKKN 371


>ref|XP_007050282.1| Rho termination factor, putative [Theobroma cacao]
           gi|508702543|gb|EOX94439.1| Rho termination factor,
           putative [Theobroma cacao]
          Length = 381

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 51/135 (37%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSE----GSVRKGIS----------LEPETDDINEI 139
           P LSRP SNF ++SPVP++K+QP+YS      SV  G S            P  D + E+
Sbjct: 236 PTLSRPASNFRRKSPVPQMKYQPIYSSEETVNSVEHGNSDGKRNLSSAKSSPAPDHVPEL 295

Query: 140 K--IESDVEPLFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRA 313
           +   ES+ EP     ++Y                    ED    +   D+  +KL ELRA
Sbjct: 296 EEDSESETEPELEPESIYQDPDALDEFSEDESSDIDE-EDREQQIGHEDLSALKLPELRA 354

Query: 314 LAKSRGMKGFSKLKK 358
           LAKSRG+KGFSK+KK
Sbjct: 355 LAKSRGLKGFSKMKK 369


>gb|KHG28019.1| SAP-like protein BP-73 [Gossypium arboreum]
          Length = 353

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYSEGSV---RKGISLEPET---DDINEIKIESDVEP 163
           P LSRP SNF ++SPVP  K+Q VYS        + +SL       D + E++ ES+ E 
Sbjct: 228 PTLSRPASNFRRKSPVPRTKYQQVYSSEETINSDRNLSLAESPAAPDHLLELESESEPES 287

Query: 164 LFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNT-VEVSDVRGMKLVELRALAKSRGMKG 340
           ++ E N+                    G DE    VE  D+  +K+ ELRALAKSRG+KG
Sbjct: 288 IYQEPNMLDELSENKSTDV--------GTDESEQQVEHEDLSALKVQELRALAKSRGLKG 339

Query: 341 FSKLKKN 361
           FSK+KK+
Sbjct: 340 FSKMKKS 346


>gb|KJB42274.1| hypothetical protein B456_007G146600 [Gossypium raimondii]
          Length = 354

 Score = 73.9 bits (180), Expect = 3e-12
 Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYS-EGSVRKGISLE-----PETDDINEIKIESDVEP 163
           P LSRP SNF ++SPV   K+Q VYS E ++    +L         DD+ E++ ES+ E 
Sbjct: 229 PTLSRPASNFRRKSPVLRTKYQQVYSSEETINSDRNLSLVESPAAPDDLPELESESEPES 288

Query: 164 LFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNT-VEVSDVRGMKLVELRALAKSRGMKG 340
           ++ E N+                    G DE    VE  D+  +K+ ELRALAKSRG+KG
Sbjct: 289 IYQEPNMLDELSESKSTDV--------GTDESERQVEHEDLSALKVQELRALAKSRGLKG 340

Query: 341 FSKLKKN 361
           FSK+KK+
Sbjct: 341 FSKMKKS 347


>ref|XP_012490699.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic-like
           [Gossypium raimondii] gi|763775150|gb|KJB42273.1|
           hypothetical protein B456_007G146600 [Gossypium
           raimondii]
          Length = 381

 Score = 73.9 bits (180), Expect = 3e-12
 Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
 Frame = +2

Query: 2   PHLSRPKSNFSKRSPVPEIKFQPVYS-EGSVRKGISLE-----PETDDINEIKIESDVEP 163
           P LSRP SNF ++SPV   K+Q VYS E ++    +L         DD+ E++ ES+ E 
Sbjct: 256 PTLSRPASNFRRKSPVLRTKYQQVYSSEETINSDRNLSLVESPAAPDDLPELESESEPES 315

Query: 164 LFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNT-VEVSDVRGMKLVELRALAKSRGMKG 340
           ++ E N+                    G DE    VE  D+  +K+ ELRALAKSRG+KG
Sbjct: 316 IYQEPNMLDELSESKSTDV--------GTDESERQVEHEDLSALKVQELRALAKSRGLKG 367

Query: 341 FSKLKKN 361
           FSK+KK+
Sbjct: 368 FSKMKKS 374


>ref|XP_010086623.1| SAP-like protein BP-73 [Morus notabilis]
           gi|587831294|gb|EXB22189.1| SAP-like protein BP-73
           [Morus notabilis]
          Length = 395

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 55/152 (36%), Positives = 70/152 (46%), Gaps = 35/152 (23%)
 Frame = +2

Query: 11  SRPKSNFSKRSPVPEIKFQPVYSE----GSVRKGIS------------------------ 106
           +RP SNF ++SPVP +KFQPVY+E     SV   IS                        
Sbjct: 241 TRPVSNFQRKSPVPRLKFQPVYTEEDTVNSVPDVISSGKRKQNQVEAVPKSDLELEFEPE 300

Query: 107 --LEPETDDINEIKIESDVEP-----LFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNT 265
              EPET+D  E++ E +VEP        EG +                     EDE   
Sbjct: 301 LEFEPETEDHEELESELEVEPEPELVQLLEGEL------SSTEEAHIDDDDDESEDEQQL 354

Query: 266 VEVSDVRGMKLVELRALAKSRGMKGFSKLKKN 361
            E  D+   KL ELRALAKSRG+KG+SK+KK+
Sbjct: 355 TEHEDLSAWKLPELRALAKSRGVKGYSKVKKS 386


>ref|XP_011028810.1| PREDICTED: rho-N domain-containing protein 1, chloroplastic-like
           [Populus euphratica] gi|743938311|ref|XP_011013574.1|
           PREDICTED: rho-N domain-containing protein 1,
           chloroplastic-like [Populus euphratica]
          Length = 389

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 27/143 (18%)
 Frame = +2

Query: 11  SRPKSNFSKRSPVPEIKFQPVYSEGS-----------------------VRKGISLEPET 121
           +RP SNF ++SPVP++KFQP+YS                            + + L+PE 
Sbjct: 238 TRPPSNFRRKSPVPQVKFQPIYSSEDPVNSTSHLNLNGEKKQQFEILPDTTQELELDPEL 297

Query: 122 DDINEIKIESDVEP----LFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRG 289
           D   E +++S+ EP     F+ G+V+                  +GE +   +E  D+  
Sbjct: 298 DAEEEHELDSEPEPEPEPSFAGGDVFDELSEGDSSDMDNVDG--DGEKQ-QLIEHEDLSS 354

Query: 290 MKLVELRALAKSRGMKGFSKLKK 358
           +KL ELRALAKSRG+KGFSK+KK
Sbjct: 355 LKLPELRALAKSRGVKGFSKMKK 377


>ref|XP_002302043.1| hypothetical protein POPTR_0002s03890g [Populus trichocarpa]
           gi|222843769|gb|EEE81316.1| hypothetical protein
           POPTR_0002s03890g [Populus trichocarpa]
          Length = 389

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 27/143 (18%)
 Frame = +2

Query: 11  SRPKSNFSKRSPVPEIKFQPVYSEGS-----------------------VRKGISLEPET 121
           +RP SNF ++SPVP++KFQP+YS                            + + L+PE 
Sbjct: 238 TRPPSNFRRKSPVPQVKFQPIYSSEDPVNSTSHLNLNGEKKQQFEILPDTTQELELDPEL 297

Query: 122 DDINEIKIESDVEP----LFSEGNVYXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRG 289
           D   E +++S+ EP     F+ G+V+                  +GE +   +E  D+  
Sbjct: 298 DAEEEHELDSEPEPEPEPSFAGGDVFDELSEGESSDMDNVDG--DGEKQ-QLIEHEDLSS 354

Query: 290 MKLVELRALAKSRGMKGFSKLKK 358
           +KL ELRALAKSRG+KGFSK+KK
Sbjct: 355 LKLPELRALAKSRGVKGFSKMKK 377


>gb|KVI12370.1| Rho termination factor, N-terminal [Cynara cardunculus var.
           scolymus]
          Length = 372

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 14/129 (10%)
 Frame = +2

Query: 14  RPKSNFSKRSPVPEIKFQPV------YSEGSV------RKGISLEPETDDINEIKIESDV 157
           RP SNF +RSPVP  K++P+      ++ GS+      RK +  EP  D   EIK++++ 
Sbjct: 237 RPASNFQRRSPVPRFKYKPILSGEESFTPGSLSRTDGKRKEVVHEP--DSTPEIKMDTEP 294

Query: 158 EPLFSEGNV--YXXXXXXXXXXXXXXXXXXNGEDEPNTVEVSDVRGMKLVELRALAKSRG 331
           EP         +                  +  +E N +E +D+ GMKL ELRA+AKSRG
Sbjct: 295 EPQIESKAFRGFDESSDDETSDIEDTADEVDDSEEANVIENNDLSGMKLPELRAVAKSRG 354

Query: 332 MKGFSKLKK 358
           +KG S+LKK
Sbjct: 355 IKGLSRLKK 363