BLASTX nr result

ID: Rehmannia27_contig00013493 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00013493
         (437 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013443334.1| hypothetical protein MTR_0020s0050 [Medicago...    62   3e-09
gb|ABN08684.1| hypothetical protein MtrDRAFT_AC157893g45v2 [Medi...    54   6e-07

>ref|XP_013443334.1| hypothetical protein MTR_0020s0050 [Medicago truncatula]
           gi|657371360|gb|KEH17359.1| hypothetical protein
           MTR_0020s0050 [Medicago truncatula]
          Length = 195

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 44/99 (44%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = +3

Query: 6   PHAFFKAH---CRQDAR--PNPNNPL----CPHSRAP*KTSQGVTHPMSTPGQARLTSEF 158
           P A+ K +   C Q++R  P  N  L    CPHS A  +TS+ VTHP   P QARLT EF
Sbjct: 93  PVAYSKCNIPDCFQNSRLTPQTNTSLFSMFCPHSHAYRETSRYVTHPKIAPSQARLTVEF 152

Query: 159 LCNGHQKRRCTLLV*VVHI*SFKLYFLTVQPKVDSCRAP 275
           L N   KRRC LL+ VV   S+K  F    P +   R P
Sbjct: 153 LWNELPKRRCILLILVVSNNSYKPSFNHAVPYLYGLRIP 191


>gb|ABN08684.1| hypothetical protein MtrDRAFT_AC157893g45v2 [Medicago truncatula]
          Length = 80

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 27/48 (56%), Positives = 31/48 (64%)
 Frame = +2

Query: 68  LSSLTRTLKNFPGGHPSHVYSRSSTLNLRVSM*WTPEKKMHLVGMSST 211
           L SL    +NFP GHPS  YS+SSTLN  V M W  +K MHLV + ST
Sbjct: 8   LFSLACLPRNFPAGHPSKDYSKSSTLNCGVLMEWATKKNMHLVDIGST 55


Top