BLASTX nr result
ID: Rehmannia27_contig00013306
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00013306
(4145 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo... 771 0.0
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera] 697 0.0
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] 684 0.0
gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposo... 680 0.0
gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposo... 666 0.0
ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotei... 659 0.0
ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobrom... 652 0.0
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 647 0.0
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 644 0.0
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 640 0.0
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 632 0.0
gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposo... 615 0.0
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 609 0.0
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera] 598 0.0
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 577 0.0
gb|KYP50361.1| Retrovirus-related Pol polyprotein from transposo... 563 0.0
emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera] 615 0.0
gb|KYP35753.1| Retrovirus-related Pol polyprotein from transposo... 559 0.0
emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera] 631 0.0
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 574 0.0
>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1120
Score = 771 bits (1992), Expect(2) = 0.0
Identities = 395/755 (52%), Positives = 517/755 (68%), Gaps = 9/755 (1%)
Frame = +2
Query: 266 EFKENQQKDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLR 445
+ ++ +QKD + RIM TAK+AWD L+EEF+GNE+VR+ +L LR
Sbjct: 1 KLEDCEQKDAQALFVLQQAVGETIARRIMDVDTAKKAWDILEEEFEGNEQVRSVKLHYLR 60
Query: 446 RKFENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIE 625
R+FE +KM +SET ++YY R+ E++N+++ YG+ E ++V EKYD I+A+IE
Sbjct: 61 REFETIKMKESETIEEYYGRIKEIINKMKLYGKEIKEKRVV--------EKYDSIVASIE 112
Query: 626 ESKDIEKLTATELMGSLEAHEKRLERRYEKDI-DNAFQSKLSMQSQKNKKNGRKYNEGKP 802
S D L+ +L+G L+AH+ RL + + +NAFQSKL +QS +NK++G K N GK
Sbjct: 113 TSSDPSSLSVNKLIGLLKAHKARLNSCVDTNSNENAFQSKLKLQS-RNKEDGGKKNAGKY 171
Query: 803 TDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEF 982
+ N D + S +KD + P C C K GH EK C H+ANF E
Sbjct: 172 SRNKDS-------RNFSGNKKDKY----PLCGICNKPGHAEKDCW----HRANFVEEHNQ 216
Query: 983 ENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGK 1159
E LFY Q + +WYLDSGCSNHM K+++IF +D + K+++GNG +E+ GK
Sbjct: 217 EQRLFYANQEFCDNGDGSWYLDSGCSNHMAKDQNIFKDIDNSVKVKVRLGNGTMVESQGK 276
Query: 1160 GTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVIT 1339
GT+ ++TKKG R I +VLLVP + +NLLS+GQMME GYSL+FE D C IYD K + I
Sbjct: 277 GTVVVETKKGTRLIKDVLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDSK--RVEIG 334
Query: 1340 KVKM-RENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTI 1516
+VKM + NR FP+ + + AM +V+D+WLWHRRFGHFN+ LK+L+QK MMRDLP++
Sbjct: 335 QVKMEKRNRIFPLSFNRGTNIAMNVEVDDSWLWHRRFGHFNIHALKLLHQKGMMRDLPSL 394
Query: 1517 KELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDD 1696
KE + CEGC+LGKQHR F + KAWRAK LEL+HT++CGPMRTPS+ NRYFILFI D
Sbjct: 395 KENNEACEGCLLGKQHRSSFSTSKAWRAKDLLELIHTNVCGPMRTPSHTNNRYFILFIYD 454
Query: 1697 YTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGV 1876
++RMTWVYFL+ KS+VF IFKKFKA VEKQSG +IK +RSDRGKEYTS +F KFCEDEG+
Sbjct: 455 FSRMTWVYFLKTKSEVFGIFKKFKALVEKQSGKQIKVLRSDRGKEYTSCEFDKFCEDEGI 514
Query: 1877 EHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAV 2056
E QLTV Y P+QNGV ERKNR VME RSML EKGLP FWAEAV T VYLLNR PT A
Sbjct: 515 ERQLTVAYTPQQNGVLERKNRIVMEMERSMLKEKGLPNIFWAEAVYTVVYLLNRFPTNAF 574
Query: 2057 QDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVY 2236
++ TP+E+ SG KP+ KHLRVFG ICY+H+P +KR KL++KT + IFLGYS+QSKGYRVY
Sbjct: 575 RENTPIESCSGNKPATKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYSSQSKGYRVY 634
Query: 2237 SLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLP---KLTHEQEETSND---PPETPE 2398
+L T+KL ISRD+ DE+A +NWE ++EK++I +P T E+ + D PE+P
Sbjct: 635 NLQTKKLTISRDIEVDENATWNWEEKRIEKKTIYMPINQPTTSSLEDNNQDIVISPESP- 693
Query: 2399 RAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
R RSL +IY+TCNL I+EP
Sbjct: 694 RIVPQQEESSPESTPRRVRSLVDIYETCNLAILEP 728
Score = 586 bits (1511), Expect(2) = 0.0
Identities = 286/372 (76%), Positives = 327/372 (87%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IEKN TWEL D P K+ IGVKWVYKTKLNPDG++QK+KARLVAKGY+Q+ G+DY+ETFA
Sbjct: 751 IEKNNTWELVDFPHGKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQKPGVDYNETFA 810
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVARLDTIR LIALAA K W IYQLDVKSAFLNG LEEEIYVEQP GFV++G E KVLRL
Sbjct: 811 PVARLDTIRTLIALAAHKGWNIYQLDVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRL 870
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KKALYGLKQAPRAWYS+ID YFT+ GFRRS+SEPTLYIKTQG +TL++SLYVDDLI+TG
Sbjct: 871 KKALYGLKQAPRAWYSKIDQYFTD-GFRRSKSEPTLYIKTQG-QHTLLLSLYVDDLIYTG 928
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
N NM+MEFKEDMMKTFEMTDLGLM YFLGIE+ QR DGIFISQKKY E+LLK+F M GC
Sbjct: 929 TNTNMMMEFKEDMMKTFEMTDLGLMSYFLGIEVSQRNDGIFISQKKYTEALLKKFNMYGC 988
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K V T L N+ L+K DG+P+AD S+++SL+GSLLYL ATRPDIMYATS LSRFMQ P+Q
Sbjct: 989 KPVRTLLVTNEKLQKVDGAPEADASRYKSLVGSLLYLIATRPDIMYATSLLSRFMQKPNQ 1048
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
IHYG KR+LRYL+GT+ +GIWY+++T S++IGYTD+DWA SIDDMKSTSGYAF+LGSG
Sbjct: 1049 IHYGTGKRILRYLQGTREFGIWYKNMTKSRMIGYTDNDWARSIDDMKSTSGYAFSLGSGF 1108
Query: 3601 FSWASKKQATVA 3636
FSW SKKQATVA
Sbjct: 1109 FSWVSKKQATVA 1120
>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
Length = 1269
Score = 697 bits (1799), Expect(2) = 0.0
Identities = 361/801 (45%), Positives = 494/801 (61%), Gaps = 17/801 (2%)
Frame = +2
Query: 152 FWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXXXXXXXXD 331
F KM+ Y +Q LW++V + P + + Q K ++E + K D
Sbjct: 7 FGLFKMRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKAYEEEKLKKDKVITCLHSGLAD 66
Query: 332 EYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVN 511
F +IM +T K+ WDKLQ EF G+E+V+ RL TL+R+FE +KM D E+ KDY R+
Sbjct: 67 HIFTKIMNLETPKQVWDKLQGEFDGSERVKNVRLLTLKREFELMKMKDDESVKDYSGRLM 126
Query: 512 EVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEK 691
+VVNQ+R GE F K+V KI+++ +K++ I+ IEES D++ LT EL L A E+
Sbjct: 127 DVVNQMRLLGEAFTNQKVVEKIMVSVPQKFEAKISVIEESCDLQTLTIVELTSKLHAQEQ 186
Query: 692 RLERRYEKDIDNAFQSKL------SMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKS 853
R+ R ++ + AFQ+ ++Q +K KN R EG + KF PC CKR +
Sbjct: 187 RVLMRGDEATEGAFQANHKGKNSGNLQGKKFFKNSRGKAEG--SSRKGKFSPCSHCKRTN 244
Query: 854 HLEKDCWFKGKP--QCQNCKKFGHVEKSCRLKQR--------HQANFSENTEFENNLFYV 1003
H EKDCW KGKP C C K GH EK CR K++ H + E+ + +LF
Sbjct: 245 HAEKDCWHKGKPLFNCNFCNKLGHSEKYCRAKKKQSQHQPEQHASVTEEDKNDDEHLFMA 304
Query: 1004 CQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDT 1180
QA S +TW +DSGC++HMTK+ SIF +D+ + K+K+GNG+ ++A GKGTIAI T
Sbjct: 305 SQALSSHELNTWLIDSGCTSHMTKHLSIFTSIDRSVQPKVKLGNGEVVQAKGKGTIAIST 364
Query: 1181 KKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMREN 1360
K+G + + VL +P +DQNLLSV QM+ GY++ F+ + C I D I K+KM N
Sbjct: 365 KRGTKIVTNVLYIPDLDQNLLSVAQMLRNGYAVSFKENFCFISDVHGTK--IAKIKMNGN 422
Query: 1361 RCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCE 1540
F ++ +A+++++ +WH+R+GHFNL+ L+ + + M+ D+P I CE
Sbjct: 423 S-FYLKLDLVEGHVFSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTCE 481
Query: 1541 GCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVY 1720
C LGKQ RQPFP + RA LEL+H+DICGPM T S N YF LFIDD++RMTWVY
Sbjct: 482 SCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVY 541
Query: 1721 FLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGY 1900
FL+ KSQV +FK FK VE QSG +K +R+D G EYTS +F+ FC++ G+ HQLT Y
Sbjct: 542 FLKTKSQVLSMFKSFKKMVETQSGQNVKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTAPY 601
Query: 1901 APEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEA 2080
+P+QNGVS+RKNRTVME AR ML EK LPK WAEAV+T+VYLLNR PTK+VQ KTP+EA
Sbjct: 602 SPQQNGVSKRKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIEA 661
Query: 2081 WSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLI 2260
WSG KPS KHL+VFG CY+H+P KRGKLDE+ EK +F+GY +SKGYR+YSLS K++
Sbjct: 662 WSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYVAESKGYRIYSLSRMKIV 721
Query: 2261 ISRDVMFDEDAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXX 2440
ISRDV FDE++ +NW+ +V L TH+
Sbjct: 722 ISRDVHFDENSYWNWDLKKVHLMLKQLQ--THQ--------------------------- 752
Query: 2441 XXXXRSLREIYQTCNLTIMEP 2503
R L ++Y+ CNL +EP
Sbjct: 753 CLRMRPLSDVYERCNLVHVEP 773
Score = 539 bits (1388), Expect(2) = 0.0
Identities = 261/457 (57%), Positives = 332/457 (72%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE+N TW+LT+LP+ K AIGVKWV++TK N DGS+ ++KARLV KG+AQ G+DY +TFA
Sbjct: 796 IERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFA 855
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR DTIR L+ALA Q WK+Y LDVKSAFLNG L EEIYV+QP+GF V G E KV +L
Sbjct: 856 PVARHDTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKL 915
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALYGLKQAPRAWYSRID + +LGFRRS++E TLY+K L+VSLYVDD++ TG
Sbjct: 916 HKALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATLYLKQNDDGLQLVVSLYVDDMLVTG 975
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+N ++ +FK +M FEM+DLG+M+YFLG+EI+Q GIFISQ+KY +LK+FK+E C
Sbjct: 976 SNVKLLADFKMEMQDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYVMDILKKFKLESC 1035
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K VATPL N+ + K DG + S +RSL+ RFM PS
Sbjct: 1036 KEVATPLAQNEKISKNDGEKLEEPSAYRSLL-----------------VCFPRFMSLPSN 1078
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
+H G AKRVL+Y++GT N GIWY KL GY DSDWAGS+DDMKST GY FT+GSG+
Sbjct: 1079 VHMGVAKRVLKYVKGTTNLGIWYLKTGGVKLDGYADSDWAGSVDDMKSTLGYVFTIGSGV 1138
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
W S+KQ AQS+ EAEYI+ +QAIWL+++L D+G+ Q T++FCD+KSAI++
Sbjct: 1139 ICWNSRKQEVAAQSTTEAEYISLVAAANQAIWLRKLLADLGQEQSSPTELFCDNKSAISI 1198
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
A+NPV H RTKHI +K+H IREAE NS ++L +C TD
Sbjct: 1199 AQNPVHHGRTKHINLKFHSIREAEKNSLVKLHYCSTD 1235
>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
Length = 1291
Score = 684 bits (1764), Expect(2) = 0.0
Identities = 363/822 (44%), Positives = 495/822 (60%), Gaps = 18/822 (2%)
Frame = +2
Query: 92 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 271
M + S IPVF GE+Y W++KM+ Y +Q LW++V + P + + Q K +
Sbjct: 1 MTPSSNISSVIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKAY 60
Query: 272 KENQQKDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRK 451
+E + K D F +IM +T K+ WDKLQ EF+G+E+V+ RL TL+R+
Sbjct: 61 EEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQVWDKLQGEFEGSERVKNVRLLTLKRE 120
Query: 452 FENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEES 631
FE +KM D E+ KDY R+ +VVNQ+R GE F + K+V KI+++ +K++ I+AIEES
Sbjct: 121 FELMKMKDDESVKDYSGRLMDVVNQMRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEES 180
Query: 632 KDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQSKL------SMQSQKNKKNGRKYNE 793
D++ LT EL L A E+R+ R ++ + AFQ+ ++Q +K KN R E
Sbjct: 181 CDLQTLTIVELTSKLHAQEQRVLMRGDEATEGAFQANHKGKNSGNLQGKKFFKNSRGKAE 240
Query: 794 GKPTDNNDKFPPCGICKRKSHLEKDCWFKGKP--QCQNCKKFGHVEKSCRLKQR------ 949
G + KF PC CKR +H EKDCW KGKP C C K GH EK CR K++
Sbjct: 241 G--SSRKGKFLPCSHCKRTNHAEKDCWHKGKPLFNCNFCNKLGHSEKYCRAKKKQSQQQP 298
Query: 950 --HQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKI 1120
H + E+ + +LF QA S +TW +DSGC++HMTK+ SIF +D+ + K+
Sbjct: 299 EQHASVTEEDKNDDEHLFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTSIDRSVQPKV 358
Query: 1121 KIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSC 1300
K+GNG+ ++A GKGTIAI TKKG + VL +P +DQNLLSV QM+ GY++ F+ + C
Sbjct: 359 KLGNGEVVQAKGKGTIAISTKKGTKIXTNVLYIPDLDQNLLSVAQMLRNGYAISFKENFC 418
Query: 1301 TIYDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKIL 1480
I D I K+KM N F ++ +A+++++ +WH+R+GHFNL+ L+ +
Sbjct: 419 FISDVHGTE--IAKIKMNGNS-FYLKLDLVEGHVFSAKIDESVVWHKRYGHFNLKSLRFM 475
Query: 1481 NQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSN 1660
+ M+ D+P I CE C LGKQ RQPFP + RA LEL+H+DICGPM T S
Sbjct: 476 QEAGMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSL 535
Query: 1661 EQNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTS 1840
N YF LFIDD++RMTWVYFL+ KSQV +FK FK VE QSG +K
Sbjct: 536 SNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKGASE-------- 587
Query: 1841 TQFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTA 2020
+ +LT Y+P+QNGVSERKNRTVME AR ML EK LPK WAEAV+T+
Sbjct: 588 -----------LIMELTTPYSPQQNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTS 636
Query: 2021 VYLLNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFL 2200
VYLLNR PTK+VQ KTP+EAWSG KPS KHL+VFG CY+H+P KRGKLDE+ EK +F+
Sbjct: 637 VYLLNRLPTKSVQSKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFV 696
Query: 2201 GYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLPKLTHEQ-EETSN 2377
GY+ +SKGYR+YSLS K++ISRDV FDE++ +NW+ +V K P + E T
Sbjct: 697 GYAAESKGYRIYSLSRMKIVISRDVHFDENSYWNWDLKKVHKCDQTTPSILEPAIESTII 756
Query: 2378 DPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
+ P E R L ++Y+ CNL EP
Sbjct: 757 EGPLDVEAT--------SDTPVLKMRPLSDVYERCNLVHAEP 790
Score = 545 bits (1405), Expect(2) = 0.0
Identities = 266/457 (58%), Positives = 334/457 (73%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE+N TW+LT+LP+ K AIGVKWV++TK N DGS+ ++KARLV KG+AQ G+DY +TFA
Sbjct: 813 IERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFA 872
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR DTIR L+ALA Q+ WK+Y LDVKSAFLNG L EEIYV+QP+GF V G E KV +L
Sbjct: 873 PVARHDTIRLLLALAGQRGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKL 932
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALYGLKQAPRAWYSRID + +LGFRRS++E TLY+K
Sbjct: 933 HKALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATLYLK--------------------- 971
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+ D FEM+DLG+M+YFLG+EI+Q GIFISQ+KYA +LK+FK+E C
Sbjct: 972 ---------QNDDFDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESC 1022
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K VATPL N+ + K DG + S +RSL+G LLYLT TRPD+M+ S LSRFM +PS
Sbjct: 1023 KEVATPLAQNEKISKNDGEKLEEPSAYRSLVGILLYLTVTRPDLMFPASLLSRFMSSPSN 1082
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
+H G AKRVL+Y++GT N GIWY KL GY DSDWAGS+DDMKSTSGYAFT+GSG+
Sbjct: 1083 VHMGVAKRVLKYVKGTTNLGIWYLKSGGVKLNGYADSDWAGSVDDMKSTSGYAFTIGSGV 1142
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
W S+KQ VAQS+ EAEYI+ A +QAIWL+++L D+G Q T+++CD+KSAI++
Sbjct: 1143 ICWNSRKQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGREQSSPTELYCDNKSAISI 1202
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
A+NPV H RTKHI +K+H IREAE NS ++L +C TD
Sbjct: 1203 AQNPVHHGRTKHINVKFHSIREAEKNSLVKLHYCSTD 1239
>gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1262
Score = 680 bits (1754), Expect(2) = 0.0
Identities = 351/794 (44%), Positives = 493/794 (62%), Gaps = 15/794 (1%)
Frame = +2
Query: 167 MKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXXXXXXXXDEYFPR 346
M+ A DLW++V G P + Q K E K D+ F R
Sbjct: 1 MRAQLRAYDLWEVVETGVEPPPLPENSTVAQMKFHSEQVAKRAKTLTILHSAVDDDIFMR 60
Query: 347 IMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQ 526
I TAKE W+KLQEEF GNE+ + ++ L+R+FE LKM + E KD+ +++ +VVNQ
Sbjct: 61 ISNLDTAKEVWEKLQEEFFGNERTKQMQVLNLKREFEALKMNEVENIKDFMTKLMKVVNQ 120
Query: 527 LRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERR 706
+R GE P+S+IV K+L+ E+++ I+++EESKD+ K++ TEL+ +L+A E+R R
Sbjct: 121 IRLLGEKLPDSRIVEKVLVVLPERFESKISSLEESKDLSKISLTELVNALQAQEQRRLLR 180
Query: 707 YEKDIDNAF--QSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKDCWFK 880
E+ I++A + K + K K G Y GK + + FP
Sbjct: 181 QEEAIESALHVRHKGKGPAMKGKFVGEHY--GKDSKKRETFP------------------ 220
Query: 881 GKPQCQNCKKFGHVEKSCRLKQRHQ---------ANFSENTEFENNLFYVCQAASEENKD 1033
+ C K+GH+E+ CRLKQ+ Q AN +E E+ LF E+++
Sbjct: 221 -----KFCNKYGHIERFCRLKQQQQNQQNQSPQKANVTEIEGDEDLLFMAKTTKCLEDEN 275
Query: 1034 TWYLDSGCSNHMTKNESIFCQLDKISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVL 1213
TW++DSGC+ HMT F +L ++KIGNGD + TGKG + I T G ++I++VL
Sbjct: 276 TWFIDSGCTQHMTSKPEFFLELKPAGGRVKIGNGDRLAITGKGIVGIHTATGIKHISDVL 335
Query: 1214 LVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPIQWRYAN 1393
LVP +DQNLLSVGQMM+ GY L F+ SC + D L +++MR+ R FP+ W +
Sbjct: 336 LVPELDQNLLSVGQMMQSGYCLLFKEGSCIVTDVDGHELF--EIEMRK-RSFPVNWNLIS 392
Query: 1394 D--AAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHR 1567
+ ++ D+ LWH+RFGH+NL+ ++ ++ +++DLP I+ VCE C LGKQ+R
Sbjct: 393 EHECKISKIELDSKLWHKRFGHYNLKSIQFAQKQELVKDLPNIQICSEVCESCQLGKQYR 452
Query: 1568 QPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLREKSQVF 1747
PFP+ WRA + LELVH+D+CGPM+T S N+YFILFIDD+TRMTWVYFL++KS+VF
Sbjct: 453 LPFPNSVTWRANEKLELVHSDVCGPMKTTSLNGNKYFILFIDDFTRMTWVYFLKQKSEVF 512
Query: 1748 DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 1927
+FKKFKA VE QSG +K +R+D GKEYTST+F FC+D GVEHQLTV Y+P+QNGV+E
Sbjct: 513 SVFKKFKALVEAQSGFLLKKLRTDNGKEYTSTEFNIFCDDLGVEHQLTVSYSPQQNGVAE 572
Query: 1928 RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSGRKPSAK 2107
RKNR+V+E AR M+ EK LPKSFWAEA++TAVYL NR PT+A++ TPVEAW G KPS +
Sbjct: 573 RKNRSVLEMARCMIFEKKLPKSFWAEAINTAVYLQNRLPTRAIKGMTPVEAWGGIKPSVR 632
Query: 2108 HLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 2287
HL+VFG +CY H+P KR KLDE+ E+ I +GYS++SKGY+VY + + K+ +SRD+ DE
Sbjct: 633 HLKVFGSLCYTHVPAVKRSKLDERAERGILIGYSSKSKGYKVYGIDSGKVSVSRDIKVDE 692
Query: 2288 DAAYNWETNQVEKRSI--NLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXXRSL 2461
DA +NWET Q+E+ + +QEE +D R L
Sbjct: 693 DAYWNWETCQMERHLVLPTFESTIEDQEEDIDD-----------------DFAIRGTRHL 735
Query: 2462 REIYQTCNLTIMEP 2503
EIYQ CN+ ++EP
Sbjct: 736 SEIYQRCNVVVLEP 749
Score = 618 bits (1594), Expect(2) = 0.0
Identities = 296/457 (64%), Positives = 368/457 (80%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE N+TW+L D P+DK IGVKWVY+TKLNPD S+ KYKA LV KGY QQ GIDY+ETFA
Sbjct: 772 IEDNKTWQLVDKPKDKNVIGVKWVYRTKLNPDRSINKYKAILVVKGYVQQPGIDYTETFA 831
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR+DTIR L+ALAAQ +W+I+ LDVKSAFLNG L EEIYV QP+GFVV+G EDKV +L
Sbjct: 832 PVARMDTIRILLALAAQMKWEIWHLDVKSAFLNGNLVEEIYVAQPEGFVVKGDEDKVYKL 891
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALYGLKQAPRAWYSRID YF GFRRS+++ TLY+K +LI+SLYVDDL+ T
Sbjct: 892 HKALYGLKQAPRAWYSRIDSYFCSQGFRRSENDATLYVKKLLDGGSLIISLYVDDLLVTS 951
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
NN+ + + E+M F+M++LG M+YFLG+E+HQ KDGIF++Q+KYA +LK++KME C
Sbjct: 952 NNQQEVQQLMEEMQNQFKMSNLGKMNYFLGLEVHQTKDGIFMNQEKYAHEVLKKYKMESC 1011
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K V TPL N L KEDG+ K + S +RSL+GSLLYLT++RPD+MYA S LSRFMQ+PS+
Sbjct: 1012 KFVPTPLVQNLKLSKEDGAGKVNVSLYRSLVGSLLYLTSSRPDLMYAASLLSRFMQSPSE 1071
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
IH+ A KRVLRYL+GT +GIWY+ + LIGY DSDWAG+IDDMKST+GY F+LGSG+
Sbjct: 1072 IHFAATKRVLRYLKGTTQFGIWYKPRKNGSLIGYVDSDWAGNIDDMKSTTGYVFSLGSGM 1131
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
FSW SKKQ VAQS+AEAEY+A A +QAIWL++IL D+G Q +AT+I+CDSKSAIA+
Sbjct: 1132 FSWNSKKQEIVAQSTAEAEYVAGAAAANQAIWLRKILLDLGAEQLEATEIYCDSKSAIAI 1191
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
A+NPV H +TKHI++K+H IREA N EI+L HC +D
Sbjct: 1192 AENPVQHGKTKHIQVKFHVIREAVKNHEIKLIHCCSD 1228
>gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 666 bits (1719), Expect(2) = 0.0
Identities = 348/815 (42%), Positives = 498/815 (61%), Gaps = 11/815 (1%)
Frame = +2
Query: 92 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 271
MA S P PVF GENYD W+ KM+TY AQ LW++V NG + Q +
Sbjct: 1 MASGSSSLPPPPVFAGENYDLWAAKMRTYLRAQSLWEVVENGSNPAPLPDNPTMAQIRFH 60
Query: 272 KENQQKDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRK 451
+ K+ D+ F +I+ TAKEAWDKL+EEFQG+E+ R ++ LRR+
Sbjct: 61 NDEVAKEGRALAIIQAAVHDDVFIKILNLDTAKEAWDKLKEEFQGSERTRRMKVLNLRRE 120
Query: 452 FENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEES 631
FE +KM +SET K++ R+++VV Q+R GE + ++V K+L+ E+++ I+++EE+
Sbjct: 121 FEAIKMKESETVKEFSDRLSKVVTQIRLLGEELSDQRVVEKVLVCLPERFESKISSLEEN 180
Query: 632 KDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDN 811
KD +++ EL+ +L+A E+
Sbjct: 181 KDFSQISLAELVNALQATEQ---------------------------------------- 200
Query: 812 NDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLK---QRHQANFSENTE- 979
+R +E++ K C+ C + GHVEK C+ K Q QA +E+ E
Sbjct: 201 ----------RRSLRMEENVEVK----CRACNQLGHVEKVCKNKVKLQGQQAQVAEHQEQ 246
Query: 980 FENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLD-KISTKIKIGNGDYMEATG 1156
E LF + NK+ W +DSGC+NHMT + SIF +LD +K+ IGNG+ ++ G
Sbjct: 247 IEEQLFVASCYSVSNNKEAWLIDSGCTNHMTHDASIFKELDLSYLSKVTIGNGECVDVKG 306
Query: 1157 KGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVI 1336
KG +A++T G +YI +VL VP I+ NLLSVGQM+EK Y L+FE C I D L+
Sbjct: 307 KGVVAVETPSGTKYIYDVLFVPEINLNLLSVGQMLEKNYVLHFEDMKCKIIDPSGCELMT 366
Query: 1337 TKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTI 1516
++MR+ + FPI+W+ A + VND++LWH+R GHF+ LK ++ +++++LP I
Sbjct: 367 --IRMRD-KSFPIEWKQTAMHAFPSAVNDSFLWHKRLGHFSYSTLKRMSSNDLVKNLPAI 423
Query: 1517 KELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDD 1696
++ +C+ C GKQ + PFP +WRA + L+LVHTD+CGPM T S ++YF+LFIDD
Sbjct: 424 QDNANLCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDD 483
Query: 1697 YTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGV 1876
YTRM+WV+FL++KS VF F KFK VE ++G ++K +RSD G EYT+ +F KFCE G+
Sbjct: 484 YTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGI 543
Query: 1877 EHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAV 2056
+HQLTV Y P+QNGVSERKNRTVME AR +L EKGLPK+FWAEAV+T+VYLLN PTKA+
Sbjct: 544 QHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKAL 603
Query: 2057 QDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVY 2236
+ TP EAW GR PS +HL+VFGC+CY +P+ KR KLD+K+E IFLGYS+ SKGYR+Y
Sbjct: 604 KGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIY 663
Query: 2237 SLSTRKLIISRDVMFDEDAAYNWETNQVE---KRSI---NLPKLTHEQEETSNDPPETPE 2398
+ +T+K+++SR+V FDE + +NWE ++ E KR + NL + E EE + D + P
Sbjct: 664 NPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVDNLQEQNSESEEQNLDDDDFPV 723
Query: 2399 RAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
R R L EIY+ CN+ +EP
Sbjct: 724 RG---------------TRDLAEIYERCNVAALEP 743
Score = 585 bits (1509), Expect(2) = 0.0
Identities = 287/457 (62%), Positives = 356/457 (77%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IEKN TW+L D P +++ IG+KWVY+TKLN DGSV K KARLV KGY QQYG+D+ +TFA
Sbjct: 766 IEKNNTWQLVDRPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFA 825
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR DTIR L+ALAA+ WKIY DVKSAFLNG+LEE+IYV+QP+GF V+G E+KV +L
Sbjct: 826 PVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENKVYKL 885
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALYGLKQAPRAWY+RID+Y + GF RS++E TLY+K LI+SLYVDD++ G
Sbjct: 886 HKALYGLKQAPRAWYTRIDNYLLQKGFERSENEATLYVKRSQNEVKLIISLYVDDMLVIG 945
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
++ + + +FK DM FEM+DLG M+YFLG+EI+Q GIFISQ+KY +LK+F ME C
Sbjct: 946 SDFDSLRQFKHDMENEFEMSDLGQMNYFLGMEIYQCDAGIFISQRKYVLEILKKFHMEKC 1005
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K V TPL N+ L D K D S +RSLIGSLLYL+ATRPDIM+A S LSRFM +PSQ
Sbjct: 1006 KPVDTPLVINEKLSLNDAIAKVDASLYRSLIGSLLYLSATRPDIMFAASLLSRFMHSPSQ 1065
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
HYGAAKRVLRYL+GT +YG+W+ +L GY DSDWAGSIDD KSTSGY F+ GSG+
Sbjct: 1066 AHYGAAKRVLRYLKGTTDYGLWFLQNESGELQGYADSDWAGSIDDSKSTSGYVFSFGSGV 1125
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
F+W SKKQ VAQSSAEAEYI+AA + AIWL++IL D+ + Q +AT I+ D+KSAIA+
Sbjct: 1126 FTWNSKKQEVVAQSSAEAEYISAAAAANHAIWLRKILCDVKQHQNEATIIWVDNKSAIAI 1185
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
AKNPV + RTKHIK+KYH IREAE + E+ L+HC ++
Sbjct: 1186 AKNPVQYGRTKHIKVKYHAIREAEKSKEVSLKHCSSE 1222
>ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Malus domestica]
Length = 1750
Score = 659 bits (1700), Expect(2) = 0.0
Identities = 356/883 (40%), Positives = 499/883 (56%), Gaps = 79/883 (8%)
Frame = +2
Query: 92 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 271
MA + + + P+F GENY+FW IKM T F + LW++V G ++ + +KK+
Sbjct: 1 MAGSGGAEVRTPIFSGENYEFWRIKMVTIFKSHGLWNLVEKGISVXDS-------KKKKA 53
Query: 272 KENQQ----------------KDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQ 403
K ++ KD D+ FPRI A +AK AWD L E+
Sbjct: 54 KTDEDTDVDADDDEXMAAIFMKDAKALGIIQSAVSDQIFPRIANAXSAKXAWDLLXXEYH 113
Query: 404 GNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILI 583
G ++VR+ +LQ L R+FE +M D E+ Y +R+N+++NQ++ +GE ++V K+LI
Sbjct: 114 GGDQVRSVKLQNLXREFEYTRMXDDESLTGYLTRLNDLINQMKTFGETLSNERLVQKVLI 173
Query: 584 TCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQS-------- 739
+ T+ YDPI IE +K +E + E++ L++ E+R + + AF S
Sbjct: 174 SLTKIYDPICLVIENTKCLESVELQEVLAILKSQEQRFDLHSSDATEXAFSSLTVNSKGQ 233
Query: 740 KLSMQSQKNKKNGRKYNE-GKPTDNNDKF------------------------PPCGICK 844
S N K R +N+ GK D+ KF P C +C
Sbjct: 234 NRSYAQSSNFKXQRNWNQKGKKWDSKPKFQQKSFTNVAQNNAXSXVMXQEXTKPQCRVCS 293
Query: 845 RKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL-KQRHQANFSENTEFENNLFYVCQAASE 1021
K H +C +KGKP+C NC KFGH + C + K +AN + E NLFY A SE
Sbjct: 294 -KFHFG-ECRYKGKPKCYNCDKFGHWARECTIGKIXQKANSANQVEVTGNLFYANSAISE 351
Query: 1022 ENKD-TWYLDSGCSNHMTKNESIFCQL-DKISTKIKIGNGDYMEATGKGTIAIDTKKGKR 1195
+N + WY+DSGCSNHMT N + + + K+++ + G G++ IDT KGK+
Sbjct: 352 KNVNGNWYIDSGCSNHMTGNADLLVDIRTNVXGKVQMXTXVLVNVAGMGSLEIDTNKGKK 411
Query: 1196 YINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPI 1375
YI EV+ +P + +NLLSVGQM E GY L F G C+++D ++ K K +ENRC+ +
Sbjct: 412 YIREVMHLPGLKENLLSVGQMDEHGYYLVFGGGLCSVFDGPSLDNLVIKXKKKENRCYXL 471
Query: 1376 QWRYANDAAMTAQVN-DTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCML 1552
N A ++ T WHRR GH N +GLK L +KNM+ LP ++E+ VC+GC
Sbjct: 472 SLLQDNRLVXKASIDHSTRTWHRRLGHLNFRGLKQLXEKNMVHGLPYLEEIKDVCQGCQF 531
Query: 1553 GKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLRE 1732
GKQ R FP ++WRA P EL+H D+CGPM S NRYF+L IDD TRM WVYFLR
Sbjct: 532 GKQXRDWFPKNQSWRANCPXELIHXDLCGPMXNASLAGNRYFMLLIDDXTRMIWVYFLRY 591
Query: 1733 KSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQ 1912
KS F+ FK+FK+ VE QSG K K++RSDRG E+ S++FTKFCE EG++ QLT+ Y P+Q
Sbjct: 592 KSDAFNYFKRFKSMVELQSGFKXKSLRSDRGGEFLSSEFTKFCETEGIQRQLTMAYTPQQ 651
Query: 1913 NGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSGR 2092
NGV ERKNRTV+E A++ML ++G+P WAEAV TAVY+LNRCPT A+ + TP EA+SGR
Sbjct: 652 NGVVERKNRTVVEMAKTMLHDRGMPYVLWAEAVHTAVYILNRCPTMALGNMTPFEAYSGR 711
Query: 2093 KPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRD 2272
KP HL++FG +CYVH+P + R KLD K+ K +F+GY+T KGYR++ T KLI+SRD
Sbjct: 712 KPGIAHLKIFGSLCYVHVPTETRQKLDAKSIKGVFVGYATCEKGYRIFBPCTNKLILSRD 771
Query: 2273 VMFDEDAAYNWETNQ--------------------------VEKRSINLPKLTHEQEETS 2374
V+FDE +NW+ N +E S++ H QE+ S
Sbjct: 772 VVFDESMTWNWKENPQSSAAATYIQDQPENVVGMNPYEMSVIEGSSLSPSSPFHIQEQES 831
Query: 2375 NDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
TPE A R+L +I+ CNL +MEP
Sbjct: 832 C----TPESAKLSEDYDHTPLKW---RNLDDIFAQCNLCVMEP 867
Score = 607 bits (1564), Expect(2) = 0.0
Identities = 297/482 (61%), Positives = 374/482 (77%), Gaps = 6/482 (1%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IEKN TWEL D P + IGVKWVYKTKLN DG+V K KARLVAKGYAQ+ G DY+ET+A
Sbjct: 890 IEKNGTWELVDRPTMQPVIGVKWVYKTKLNLDGTVLKNKARLVAKGYAQKPGFDYNETYA 949
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVARLDTIR LIALAAQK W++YQLDVKSAFLNG L+EE+YV+QP+GF VQGKEDKV RL
Sbjct: 950 PVARLDTIRTLIALAAQKSWRLYQLDVKSAFLNGVLQEEVYVDQPEGFTVQGKEDKVYRL 1009
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALYGLKQAPRAWY ID YF++ GF++S SEPTLYIK++G + +IVS+YVDD+++TG
Sbjct: 1010 HKALYGLKQAPRAWYGEIDAYFSQCGFQKSLSEPTLYIKSRGEKDIIIVSIYVDDIVYTG 1069
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+++ M+ EFKEDMM +EMTDLGL+H+FLG+ + Q IFI QKKYA SLL +F + C
Sbjct: 1070 SSKEMLEEFKEDMMMKYEMTDLGLLHHFLGMGVIQTNFSIFIHQKKYASSLLNKFGLNEC 1129
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K+V+TPL + + L K+DGS A+ Q+R ++GSLLYLTATRPDIMYA S LSRFM +P+
Sbjct: 1130 KSVSTPLISAEKLSKDDGSGPANEEQYRKIVGSLLYLTATRPDIMYAASLLSRFMHSPTN 1189
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
HYG AKRVLRY++GT +YG+ Y ++ LIG+ DSDW GS+DD KSTSGYAF+ GSG+
Sbjct: 1190 KHYGTAKRVLRYIKGTLDYGLEYVKGKNAMLIGFCDSDWGGSVDDSKSTSGYAFSFGSGV 1249
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
FSWAS KQ VA S+AEAEYI+A+ T QAIWL+ +LED GE+Q +AT + CD+ +AIA+
Sbjct: 1250 FSWASVKQNCVALSTAEAEYISASEATVQAIWLRFVLEDFGEMQTEATPVHCDNTAAIAI 1309
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQK------HYLEESL 3942
KNPVFH +TKHI +YHFI+ A I+L +C T+ IF++ +YL + L
Sbjct: 1310 TKNPVFHQKTKHIDRRYHFIKNALQEGIIDLVYCPTNEQVADIFTKALSKDRFNYLRDML 1369
Query: 3943 RY 3948
+
Sbjct: 1370 AF 1371
>ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
gi|508719370|gb|EOY11267.1| Uncharacterized protein
TCM_026511 [Theobroma cacao]
Length = 1318
Score = 652 bits (1681), Expect(2) = 0.0
Identities = 339/827 (40%), Positives = 487/827 (58%), Gaps = 23/827 (2%)
Frame = +2
Query: 92 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 271
MA + S PVF G NY W++KMK Y A DLW++V G P + + Q K++
Sbjct: 1 MASSNYSIAAPPVFNGNNYPMWAVKMKAYLKAFDLWEVVEVGGDPPARQANPTIAQMKQY 60
Query: 272 KENQQKDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRK 451
E K D F RIM ++AKEAWDK++EEF G+++ R ++ L R+
Sbjct: 61 NEEVAKRFKALSCIHSAVTDAIFVRIMACESAKEAWDKIKEEFHGSDRTRQIQILNLLRE 120
Query: 452 FENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEES 631
FE LKM D ET KDY +V VVNQLR +GEN E ++V+K L++ EK++ I+++E+S
Sbjct: 121 FEVLKMKDEETMKDYSDKVLRVVNQLRLFGENITERRVVNKFLVSLPEKFESKISSLEDS 180
Query: 632 KDIEKLTATELMGSLEAHEKRLERRYE---------KDIDNAFQSKLSMQSQKNKKNGRK 784
KD+ ++ +EL+ +L+A E+R R E + +D S +S+ KK+ K
Sbjct: 181 KDLTTMSVSELINALQAQEQRRALRQEDHVEAALAARRVDKRTSSGSHKKSEYEKKDKDK 240
Query: 785 YNEGKPTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRH---- 952
E K +FPPC CK+K+H+E+ CW++ +C+ C + GHVEK C+ K+
Sbjct: 241 RYEEKKQGKKWQFPPCSYCKKKNHIERYCWYRPHVKCRACNQKGHVEKVCKNKENRVEEK 300
Query: 953 QANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDKI-STKIKIG 1129
A + + E LF V ++ + W +DS CS H+T F L+K + ++IG
Sbjct: 301 AAIVEQKEDAEETLFMVIESNDSKKDSIWLIDSACSTHITGKIKNFLDLNKAYKSTVEIG 360
Query: 1130 NGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIY 1309
+G+ ++ G+GT+ I TKKG + I V P + QNLLSVGQ++++ SL F+ + CTI+
Sbjct: 361 DGNLLKIAGRGTVGITTKKGMKTIANVCFAPEVTQNLLSVGQLVKEKNSLLFKDELCTIF 420
Query: 1310 DKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQK 1489
D + I VKMR N+CFP+ A A N+ LWHRR GH N Q +K +
Sbjct: 421 DPSGRE--IATVKMR-NKCFPLDLNEAGHMAYKCVSNEARLWHRRLGHINYQFIKNMGSL 477
Query: 1490 NMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQN 1669
N++ D+P I E++ CE C+ GKQ R PFP R L+L+HTDICGP+ T S N
Sbjct: 478 NLVNDMPIITEVEKTCEVCLQGKQSRHPFPKQSQTRTANRLQLIHTDICGPIGTLSLNGN 537
Query: 1670 RYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQF 1849
+YFILFIDD++R W++FL++KS+ F KFK VEKQ+ KIK +RSD G EYTS +F
Sbjct: 538 KYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEF 597
Query: 1850 TKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYL 2029
EG++ LTV Y+P+QNGVSERKNRT+ME R +L E+ +PK FWAEA + AV L
Sbjct: 598 KALLTQEGIKQFLTVPYSPQQNGVSERKNRTIMEMIRCLLFEQQMPKYFWAEAANFAVTL 657
Query: 2030 LNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYS 2209
N PT A+ TP E W G KPS +++VFGCI Y +PQQKR KLD KT+ I LGYS
Sbjct: 658 QNLIPTTALNSMTPFEVWHGYKPSISNVKVFGCIAYAQVPQQKRTKLDSKTQISINLGYS 717
Query: 2210 TQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKR-----SINL----PKLTHEQ 2362
+ SKGYR++++ T+K+ ISRDV+F+ED +NW N++ + ++NL + HE
Sbjct: 718 SVSKGYRLFNVETKKVFISRDVVFNEDIHWNWMKNEIAENNNDNVAVNLDVFEEEAGHEL 777
Query: 2363 EETSNDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
++ +D P RSL++IY+ CN+ I +P
Sbjct: 778 DDNIDDMP------------------VRGIRSLQDIYEQCNVAITDP 806
Score = 558 bits (1439), Expect(2) = 0.0
Identities = 274/466 (58%), Positives = 354/466 (75%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
I++N+TW L D P+ + I VKW+++TKLN DGS+ K KARLV +G++Q +G+D+ ETFA
Sbjct: 829 IKRNQTWILVDRPKHQRVISVKWIFRTKLNSDGSINKLKARLVVRGFSQVHGVDFFETFA 888
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR DTIR L+ALA +++W+I+ +DVKSAFLNG + E+IYVEQP+GFV +GKEDKV +L
Sbjct: 889 PVARHDTIRLLVALAGREKWRIWHMDVKSAFLNGTISEDIYVEQPEGFVEKGKEDKVCKL 948
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALYGLKQAPRAWY +ID Y F S+SEPTLY+K+ LIVS+YVDDL+ TG
Sbjct: 949 IKALYGLKQAPRAWYKKIDAYLRSNKFFCSESEPTLYVKSSLGKIQLIVSVYVDDLLITG 1008
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
N++ + F+ M F+M+DLG M YFLG+EI QR D I + QKKYA LLKRFKMEGC
Sbjct: 1009 PNKSDLNSFRNKMKSEFDMSDLGEMSYFLGLEIQQRSDFICLHQKKYAGELLKRFKMEGC 1068
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K V+TPL L K+DGS D +Q+R LIG LLYL+A+RPDIMY TS LSRFMQ+P++
Sbjct: 1069 KPVSTPLTTGTKLCKDDGSTLVDVTQYRKLIGCLLYLSASRPDIMYTTSLLSRFMQSPTK 1128
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H AAKRVLRY++GT NYG+ Y V + +L GY+DSDWAGS DD KSTSGY F+ GS +
Sbjct: 1129 THLTAAKRVLRYVKGTLNYGLLYGQVENKELEGYSDSDWAGSYDDSKSTSGYCFSFGSAM 1188
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
FSW SKKQ VAQSSAEAEY+AAA T+QA+WL+++L D+ Q T ++ D++SAIA+
Sbjct: 1189 FSWNSKKQDIVAQSSAEAEYVAAASATNQALWLRKVLLDLKFEQINPTVLWLDNQSAIAL 1248
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQ 3918
AKNP+ H+RTKHI+IK+H IREA N+E+ + +C TD IF++
Sbjct: 1249 AKNPINHSRTKHIRIKFHVIREAVTNNEVVVNYCGTDDQIADIFTK 1294
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 647 bits (1668), Expect(2) = 0.0
Identities = 341/826 (41%), Positives = 509/826 (61%), Gaps = 35/826 (4%)
Frame = +2
Query: 122 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 301
+PV NYD WS++MK A D+W+IV G+ P + +LS QK ++++++D
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 302 XXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 481
++ F +++ A +AKEAW+KL+ ++G ++V+ RLQTLR +FE L+M + E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 482 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 661
DY+SRV V N L+ GE + +I+ K+L + K++ I+ IEE+KD+E +T +
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 662 LMGSLEAHEKRLERR---YEKDIDNAFQSKLSMQSQKNKKNGRKYNEGK----------- 799
L+GSL+A+E++ +++ E+ ++ + + QS + + G+ G+
Sbjct: 190 LLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 800 -PTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 964
+ N + + K H K + K +C NC KFGH C+ K +AN+
Sbjct: 250 HEDNTNQRGENSSRGRGKGH-PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANY 308
Query: 965 SENTEFENNLFYVCQAASEENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNG 1135
E E ++ + +E K+ WYLDSG SNHM +S+F +LD+ + + +G+
Sbjct: 309 VEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368
Query: 1136 DYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYD 1312
ME GKG I I K G ++I+ V +P++ N+LS+GQ++EKGY + + ++ +I D
Sbjct: 369 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428
Query: 1313 KKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILN 1483
++ S +ITKV M +NR F + R ND A ++ ++WLWH RFGH N GL++L+
Sbjct: 429 QE--SNLITKVPMSKNRMFVLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 1484 QKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNE 1663
+K M+R LP I + VCEGC+LGKQ + FP + RA+KPLEL+HTD+CGP++ S
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544
Query: 1664 QNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTST 1843
++ YF+LFIDD++R TWVYFL+EKS+VF+IFKKFKA+VEK+SG IKT+RSDRG E+TS
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604
Query: 1844 QFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAV 2023
+F K+CED G+ QLTV +P+QNGV ERKNRT++E ARSML K LPK WAEAV+ AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 2024 YLLNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLG 2203
YLLNR PTK+V KTP EAWSGRKP HLRVFG I + H+P +KR KLD+K+EK IF+G
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724
Query: 2204 YSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSI-----NLPKLTHEQEE 2368
Y SKGY++Y+ T+K IISR+++FDE+ ++W +N+ + + P+ T E E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE-EP 783
Query: 2369 TSNDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTC----NLTI 2494
S +P P RS++E+Y+ NLT+
Sbjct: 784 PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTL 829
Score = 558 bits (1438), Expect(2) = 0.0
Identities = 265/456 (58%), Positives = 348/456 (76%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
I+KN+TWELT LP +AIGVKWVYK K N G V++YKARLVAKGY+Q+ GIDY E FA
Sbjct: 861 IQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFA 920
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVARL+T+R +I+LAAQ +WKI+Q+DVKSAFLNG LEEE+Y+EQPQG++V+G+EDKVLRL
Sbjct: 921 PVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRL 980
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KK LYGLKQAPRAW +RID YF E F + E LYIK Q + LI LYVDDLIFTG
Sbjct: 981 KKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTG 1039
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
NN ++ EFK++M K FEMTD+GLM Y+LGIE+ Q +GIFI+Q+ YA+ +LK+FKM+
Sbjct: 1040 NNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDS 1099
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
V TP++ L K++ D + F+SL+GSL YLT TRPDI+YA +SR+M++P+
Sbjct: 1100 NPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTT 1159
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H+ AAKR+LRY++GT N+G+ Y + +D KL+GY+DSDW G +DD KSTSG+ F +G
Sbjct: 1160 THFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTA 1219
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
F+W SKKQ V S+ EAEY+AA AIWL+ +L+++ QE+ TKIF D+KSAIA+
Sbjct: 1220 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1279
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKT 3888
AKNPVFH+R+KHI +YH+IRE + +++LE+ KT
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1315
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 644 bits (1662), Expect(2) = 0.0
Identities = 340/826 (41%), Positives = 509/826 (61%), Gaps = 35/826 (4%)
Frame = +2
Query: 122 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 301
+PV NYD WS++MK A D+W+IV G+ P + +LS QK ++++++D
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 302 XXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 481
++ F +++ A +AKEAW+KL+ ++G ++V+ RLQTLR +FE L+M + E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 482 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 661
DY+SRV V N L+ GE + +I+ K+L + K++ I+ IEE+KD+E +T +
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 662 LMGSLEAHEKRLERRY---EKDIDNAFQSKLSMQSQKNKKNGRKYNEGK----------- 799
L+GSL+A+E++ +++ E+ ++ + + QS + + G+ G+
Sbjct: 190 LLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 800 -PTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 964
+ N + + K H K + K +C NC KFGH C+ K +A++
Sbjct: 250 HEDNTNQRGENSSRGRGKGH-PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHY 308
Query: 965 SENTEFENNLFYVCQAASEENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNG 1135
E E ++ + +E K+ WYLDSG SNHM +S+F +LD+ + + +G+
Sbjct: 309 VEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368
Query: 1136 DYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYD 1312
ME GKG I I K G ++I+ V +P++ N+LS+GQ++EKGY + + ++ +I D
Sbjct: 369 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428
Query: 1313 KKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILN 1483
++ S +ITKV M +NR F + R ND A ++ ++WLWH RFGH N GL++L+
Sbjct: 429 QE--SNLITKVPMSKNRMFVLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 1484 QKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNE 1663
+K M+R LP I + VCEGC+LGKQ + FP + RA+KPLEL+HTD+CGP++ S
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544
Query: 1664 QNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTST 1843
++ YF+LFIDD++R TWVYFL+EKS+VF+IFKKFKA+VEK+SG IKT+RSDRG E+TS
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604
Query: 1844 QFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAV 2023
+F K+CED G+ QLTV +P+QNGV ERKNRT++E ARSML K LPK WAEAV+ AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 2024 YLLNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLG 2203
YLLNR PTK+V KTP EAWSGRKP HLRVFG I + H+P +KR KLD+K+EK IF+G
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724
Query: 2204 YSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSI-----NLPKLTHEQEE 2368
Y SKGY++Y+ T+K IISR+++FDE+ ++W +N+ + + P+ T E E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE-EP 783
Query: 2369 TSNDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTC----NLTI 2494
S +P P RS++E+Y+ NLT+
Sbjct: 784 PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTL 829
Score = 556 bits (1434), Expect(2) = 0.0
Identities = 264/456 (57%), Positives = 348/456 (76%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
I+KN+TWELT LP +AIGVKWVYK K N G V++YKARLVAKGY+Q+ GIDY E FA
Sbjct: 861 IQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFA 920
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVARL+T+R +I+LAAQ +WKI+Q+DVKSAFLNG LEEE+Y+EQPQG++V+G+EDKVLRL
Sbjct: 921 PVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRL 980
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KK LYGLKQAPRAW +RID YF E F + E LYIK Q + LI LYVDDLIFTG
Sbjct: 981 KKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTG 1039
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
NN ++ EFK++M K FEMTD+GLM Y+LGIE+ Q +GIFI+Q+ YA+ +LK+FK++
Sbjct: 1040 NNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDS 1099
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
V TP++ L K++ D + F+SL+GSL YLT TRPDI+YA +SR+M++P+
Sbjct: 1100 NPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTT 1159
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H+ AAKR+LRY++GT N+G+ Y + +D KL+GY+DSDW G +DD KSTSG+ F +G
Sbjct: 1160 THFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTA 1219
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
F+W SKKQ V S+ EAEY+AA AIWL+ +L+++ QE+ TKIF D+KSAIA+
Sbjct: 1220 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1279
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKT 3888
AKNPVFH+R+KHI +YH+IRE + +++LE+ KT
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1315
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 640 bits (1651), Expect(2) = 0.0
Identities = 338/826 (40%), Positives = 508/826 (61%), Gaps = 35/826 (4%)
Frame = +2
Query: 122 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 301
+PV NYD WS++MK A D+W+IV G+ P + +LS QK ++++++D
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 302 XXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 481
++ F +++ A +AKEAW+KL+ ++G ++V+ RLQTLR +FE L+M + E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 482 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 661
DY+SRV V N L+ GE + +I+ K+L + K++ I+ IEE+KD+E +T +
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 662 LMGSLEAHEKRLERR---YEKDIDNAFQSKLSMQSQKNKKNGRKYNEGK----------- 799
L+GSL+A+E++ +++ E+ ++ + + QS + + G+ G+
Sbjct: 190 LLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 800 -PTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 964
+ N + + K H K + K +C NC KFGH C+ K +AN+
Sbjct: 250 HEDNTNQRGENSSRGRGKGH-PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANY 308
Query: 965 SENTEFENNLFYVCQAASEENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNG 1135
E E ++ + +E ++ WYLDSG SNHM +S+F +LD+ + + +G+
Sbjct: 309 VEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368
Query: 1136 DYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYD 1312
ME GKG I I K G ++I+ V +P++ N+LS+GQ++EKGY + + ++ +I D
Sbjct: 369 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428
Query: 1313 KKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILN 1483
++ S +ITKV M +NR F + R ND A ++ ++WLWH RFGH N GL++L+
Sbjct: 429 QE--SNLITKVPMSKNRMFVLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 1484 QKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNE 1663
+K M+R LP I + VCEGC+LGKQ + FP + RA+K LEL+HTD+CGP++ S
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLG 544
Query: 1664 QNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTST 1843
++ YF+LFIDD++R TWVYFL+EKS+VF+IFKKFKA+VEK+SG IKT+RSDRG E+TS
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604
Query: 1844 QFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAV 2023
+F K+CED G+ QLTV +P+QNGV+ERKNRT++E ARSML K LPK WAEAV+ AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 2024 YLLNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLG 2203
YLLNR PTK+V KTP EAWSGRK HLRVFG I + H+P +KR KLD+K+EK IF+G
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724
Query: 2204 YSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSI-----NLPKLTHEQEE 2368
Y SKGY++Y+ T+K IISR+++FDE+ ++W +N+ + + P+ T E E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE-EP 783
Query: 2369 TSNDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTC----NLTI 2494
S +P P RS++E+Y+ NLT+
Sbjct: 784 PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTL 829
Score = 560 bits (1443), Expect(2) = 0.0
Identities = 269/475 (56%), Positives = 355/475 (74%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
I+KN+TWELT LP + IGVKWVYK K N G V++YKARLVAKGY Q+ GIDY E FA
Sbjct: 861 IQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFA 920
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVARL+T+R +I+LAAQ +WKI+Q+DVKSAFLNG LEEE+Y+EQPQG++V+G+EDKVLRL
Sbjct: 921 PVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRL 980
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KKALYGLKQAPRAW +RID YF E F + E LYIK Q + LI LYVDDLIFTG
Sbjct: 981 KKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTG 1039
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
NN +M EFK++M K FEMTD+GLM Y+LGIE+ Q +GIFI+Q+ YA+ +LK+FKM+
Sbjct: 1040 NNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDS 1099
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
V TP++ L K++ D + F+SL+GSL YLT TRPDI+YA +SR+M++P+
Sbjct: 1100 NPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTT 1159
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H+ AAKR+LRY++GT N+G+ Y + +D KL+GY+DSDW G +DD KSTSG+ F +G
Sbjct: 1160 THFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTA 1219
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
F+W SKKQ V S+ EAEY+AA AIWL+ +L+++ QE+ TKIF D+KSAIA+
Sbjct: 1220 FTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1279
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQKHYLEESLR 3945
AKNPVFH+R+KHI +YH+IRE + +++LE+ KT IF++ E+ ++
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1334
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 632 bits (1629), Expect(2) = 0.0
Identities = 306/485 (63%), Positives = 388/485 (80%), Gaps = 6/485 (1%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTK------LNPDGSVQKYKARLVAKGYAQQYGID 2682
IEKNETW+L + P+DKE IGVKW+++ K + DG VQ+ KARLVAKGY+QQ G D
Sbjct: 926 IEKNETWQLVEKPKDKEIIGVKWIFRVKWIFRXKYHSDGRVQRLKARLVAKGYSQQPGXD 985
Query: 2683 YSETFAPVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKE 2862
+ ETFAPVARLDTIR +IA+AAQK W +YQLD+KSAFLNG LE EIYVEQPQGFVV G+E
Sbjct: 986 FHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVEQPQGFVVDGEE 1045
Query: 2863 DKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVD 3042
+KV +LKKALYGLKQAPRAWY++ID YF E GF RS+SEPTLY+K++ + LIV+LYVD
Sbjct: 1046 NKVYKLKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQILIVALYVD 1105
Query: 3043 DLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKR 3222
DLIFTGN+E M+ +F+ +MMK +EM+D+GL+HYFLGIE++Q +DG+FI QK+Y E +LK+
Sbjct: 1106 DLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEVYQEEDGVFICQKRYVEHILKK 1165
Query: 3223 FKMEGCKTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRF 3402
F M GC V+TPL N+ L+KEDG D + FRSL+G+LLYLTATRPDIM+A S LSRF
Sbjct: 1166 FGMAGCNXVSTPLVVNEKLRKEDGGKMVDETHFRSLVGNLLYLTATRPDIMFAASLLSRF 1225
Query: 3403 MQNPSQIHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAF 3582
M PS +H GAAKRVLRYL+GT GI Y + KLIG+ DSDW G IDDMKSTSGYAF
Sbjct: 1226 MHYPSHLHLGAAKRVLRYLQGTVELGIKYFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAF 1285
Query: 3583 TLGSGIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDS 3762
+LGSG+ SW SKKQ +VAQSSAEAEYI+A++ TSQAIWL+RILED+ E Q +AT + CD+
Sbjct: 1286 SLGSGVISWVSKKQGSVAQSSAEAEYISASLATSQAIWLRRILEDIKEKQNEATYLLCDN 1345
Query: 3763 KSAIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQKHYLEESL 3942
KSAIA+AKN VFH+RT+HI +KYHFI+E ++ E++L +CK++ IF++ LE+ +
Sbjct: 1346 KSAIAIAKNXVFHSRTRHIAVKYHFIKEVISDGEVQLMYCKSEEQXADIFTKALPLEKLV 1405
Query: 3943 RYYEI 3957
+ ++
Sbjct: 1406 HFRKL 1410
Score = 609 bits (1570), Expect(2) = 0.0
Identities = 292/537 (54%), Positives = 380/537 (70%), Gaps = 16/537 (2%)
Frame = +2
Query: 941 KQRHQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTK 1117
K QA+ +E E + N+FY CQ+ +E+ + W+LDSGC+NHMT N++IF +D I+++
Sbjct: 388 KNNQQASCAEEKEADENMFYACQSVAEQKNNVWFLDSGCTNHMTGNKNIFLDMDTTINSQ 447
Query: 1118 IKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDS 1297
+K+GNGD + GKGT+ I K G +YI +VLLVP ++Q LLSVGQ++E GY L+FE +
Sbjct: 448 VKMGNGDLVNVKGKGTVGIQXKVGTKYIRDVLLVPALEQXLLSVGQLVEHGYKLHFENNE 507
Query: 1298 CTIYDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQ-VNDTWLWHRRFGHFNLQGLK 1474
CTIYDK+ + ++ K+KM +NR FPI ++Y + A+ + V + WLWHRRFGH N LK
Sbjct: 508 CTIYDKEQRRNLVKKIKMEKNRSFPIVFKYVENVALRMEDVEEAWLWHRRFGHLNFNSLK 567
Query: 1475 ILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTP 1654
+L Q+ M HRQ FP G AWRAKK LELVHTDICGPM TP
Sbjct: 568 MLCQRKM---------------------HHRQSFPKGVAWRAKKVLELVHTDICGPMSTP 606
Query: 1655 SNEQNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEY 1834
S N+YF+LFIDD+TRMTWV+F+++KS+VF IFKKFK++VEKQSG IKT+RSDRG EY
Sbjct: 607 SQGNNKYFVLFIDDFTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCYIKTLRSDRGMEY 666
Query: 1835 TSTQFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVS 2014
TS+QF FCEDEGVE QLTV Y P+QNGV ERKN+TVME A++ML EKGLPK FWAEAV+
Sbjct: 667 TSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEKGLPKIFWAEAVN 726
Query: 2015 TAVYLLNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCI 2194
TAVYLLNRCPTKA+ +KTP+EAWSGRKPS +H +VFGC+CY +P+Q+R KLDE +EKCI
Sbjct: 727 TAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLDETSEKCI 786
Query: 2195 FLGYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLPKL-------- 2350
F+GYS+QSKGYR+Y+L T KLIISRDV+FDE A+NWE ++ K++I + +L
Sbjct: 787 FMGYSSQSKGYRLYNLKTXKLIISRDVIFDEKVAWNWEEGKILKKTILVDELQTKAPVET 846
Query: 2351 ------THEQEETSNDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
T +E+ P +P RSL ++Y+ CNL I+EP
Sbjct: 847 GNGSTSTSSPQESPRSVPLSPSIESPTSXSSSPSSTPRKMRSLTDVYERCNLCIVEP 903
Score = 182 bits (462), Expect = 9e-43
Identities = 92/212 (43%), Positives = 132/212 (62%)
Frame = +2
Query: 131 FRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXX 310
F GENYDFW +KMKT F +QD+WD+V NG+ P V+K + KE ++ D
Sbjct: 214 FNGENYDFWCVKMKTLFMSQDVWDLVENGFDEP-------PVEKXQLKELKKMDAKALLF 266
Query: 311 XXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAK 490
+ FPRIM A AKEAWD LQ+EFQG+++ R+ +LQ LRR+ EN+KM ++ET
Sbjct: 267 IQQGVGNNIFPRIMRASKAKEAWDILQQEFQGDKRTRSVKLQALRRELENMKMKENETLN 326
Query: 491 DYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMG 670
++ S+ E+VNQ+++YGE + +IV K+LI+ K+DPI+A IEE+KD+ L+A EL G
Sbjct: 327 EFSSKFMELVNQMKSYGEEISDKRIVEKLLISLPSKFDPIVAVIEETKDLSLLSAQELFG 386
Query: 671 SLEAHEKRLERRYEKDIDNAFQSKLSMQSQKN 766
+ E D +N F + S+ QKN
Sbjct: 387 FKNNQQASCAEEKEAD-ENMFYACQSVAEQKN 417
>gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1270
Score = 615 bits (1586), Expect(2) = 0.0
Identities = 331/797 (41%), Positives = 474/797 (59%), Gaps = 18/797 (2%)
Frame = +2
Query: 167 MKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXXXXXXXXDEYFPR 346
M+ + A DLW+ V Y I + Q K KE + + F R
Sbjct: 1 MQNFLEALDLWEAVEEDYEIAPLPDNPTITQMKTHKEKKTRKAKAKACLFSGVSKIIFTR 60
Query: 347 IMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQ 526
IM TAK WD L+EE+ G+E++R+ ++ L R+FE +M +S+T K+Y + + + N+
Sbjct: 61 IMSHNTAKAIWDYLKEEYAGDERIRSMQVLNLMREFELQRMKESDTIKEYSNTLLGIANK 120
Query: 527 LRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERR 706
+R G F +S+IV KIL++ E+Y+ IA +E +KD+ K+T E+M +L+A E+R R
Sbjct: 121 VRLLGTAFSDSRIVEKILVSVPERYEASIATLENTKDLSKITLAEVMHALQAQEQRRLMR 180
Query: 707 YEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKP---------TDNNDKFPPCGICKRKSHL 859
E ++ AFQ K QS NK+ ++ N+ +P + N FPPC H
Sbjct: 181 QEGSVEGAFQVKF--QSNGNKQKKKQNNDTRPGRLNKINNTSSNTQVFPPC------PHY 232
Query: 860 EKDCWFKGKPQCQNCKKFGHVEKSCRLKQRH-QANFSENTEFENNLFYVCQAASEENKDT 1036
K C C + GH+EK C+ Q+ + +E+ E LF V A+ + ++
Sbjct: 233 VK---------CHKCGQLGHMEKICKSHQQQGEVKVAEDQSQEEQLFAVTCFAANSSTES 283
Query: 1037 WYLDSGCSNHMTKNESIFCQLDKIS-TKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVL 1213
W +DSGC+NHM+ + +F +LDK + +K+++GNG Y+ GKGT+AI+ + G + I++VL
Sbjct: 284 WLIDSGCTNHMSYDRELFKELDKTALSKVRVGNGAYIAVKGKGTVAIEGQTGLKLISDVL 343
Query: 1214 LVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPIQWRYAN 1393
VP I+QNLLSV Q++EKGY + FE +C I D K + KV+M+ + F + +
Sbjct: 344 YVPEINQNLLSVPQLLEKGYKVLFEDKNCIIKDSAGKE--VFKVRMK-GKSFALDFMSEE 400
Query: 1394 DAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQP 1573
AA+ +V++T LWH+R GHF+ L + + NM+R L I+E C C GKQ R P
Sbjct: 401 HAAVHKEVSNTILWHKRLGHFHHSALIFMKKNNMVRGLSDIEEESPTCIACQYGKQTRLP 460
Query: 1574 FPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLREKSQVFDI 1753
FP K WRA + L+L+HTD+ GPM TPS +RY+I+FIDD TRM W+YF++ K +V DI
Sbjct: 461 FPQNKTWRAIQNLQLIHTDVGGPMSTPSLNGSRYYIIFIDDMTRMCWIYFMKFKYEVADI 520
Query: 1754 FKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSERK 1933
F KFK VE QS K++ IRSD G EYTS +F KFCED GVEHQLT Y+P+QNG +ERK
Sbjct: 521 FWKFKTLVENQSKCKMQMIRSDNGTEYTSKKFNKFCEDTGVEHQLTAPYSPQQNGTAERK 580
Query: 1934 NRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSGRKPSAKHL 2113
NRT+ME AR +L +K LPK FWAEAV+TAV+LLNR PTKA+Q KTP EAW G KP +L
Sbjct: 581 NRTIMEMARCLLHDKDLPKKFWAEAVNTAVFLLNRLPTKALQQKTPFEAWYGYKPELFNL 640
Query: 2114 RVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDEDA 2293
++FGC+C+ +IP KR KLD+K E IF+GYS SK YR+Y K+I+SRDV F E
Sbjct: 641 KIFGCLCFSYIPHIKRDKLDKKAEPGIFVGYSLISKAYRIYLPHKNKVIVSRDVKFLEFD 700
Query: 2294 AYNWETNQ-------VEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXX 2452
++W+ N+ ++ + N L E E+ ++P
Sbjct: 701 CWSWKDNKFLEQIDCLDWKGNNELGLQEENEDVDDEP-------------------VRGT 741
Query: 2453 RSLREIYQTCNLTIMEP 2503
R L +IYQ CN+ +MEP
Sbjct: 742 RLLSDIYQRCNVAVMEP 758
Score = 589 bits (1519), Expect(2) = 0.0
Identities = 279/457 (61%), Positives = 362/457 (79%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IEKN+TW+L D P K+AIGVKWVY+TK NPDGSV KYKARLV KGYAQ +G+D+SETFA
Sbjct: 781 IEKNQTWQLVDRPSHKKAIGVKWVYRTKFNPDGSVNKYKARLVVKGYAQMFGVDFSETFA 840
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVARLDTIR L+ALAAQK W I+QLDVKSAFLNGYLEEEI+VEQP+GF +QG+EDKV L
Sbjct: 841 PVARLDTIRLLLALAAQKGWLIHQLDVKSAFLNGYLEEEIFVEQPEGFALQGQEDKVYLL 900
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KKALYGLKQAPR+WYSRID + LGF +S SE TLYIK + + L++SLYVDDL TG
Sbjct: 901 KKALYGLKQAPRSWYSRIDAHLMSLGFVKSLSEYTLYIK-KVNEDILMISLYVDDLFVTG 959
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
N + MI +FKE+M FEMTDLG M +FLG+++ Q+K+ IF+ Q+KYA+ +L +F M C
Sbjct: 960 NCKEMIDKFKEEMENVFEMTDLGKMTFFLGMQVQQKKNEIFVCQEKYAKEVLMKFNMGEC 1019
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K+ ATP++ + +EDG+ K D FRSLIG L+YLTATRPDIM++ S LSR+M S+
Sbjct: 1020 KSAATPMNQKEKFCREDGAEKVDEKLFRSLIGCLMYLTATRPDIMHSVSLLSRYMHCASE 1079
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
IH+ AAKR+LRY++GT +YG+W++ V GY+DSDWAG +DDM+STSGY F+LGSG+
Sbjct: 1080 IHFQAAKRILRYVKGTIDYGVWFKKVESLSFHGYSDSDWAGCVDDMRSTSGYCFSLGSGV 1139
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
FSW SKKQ +AQS+AEAEY+AAA +Q +W+++I+ D+ QE +TKIF D+++AI++
Sbjct: 1140 FSWCSKKQEIIAQSTAEAEYVAAAAAVNQTVWIRKIMADLHIEQEDSTKIFVDNQAAISI 1199
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
A NPVFH +TKH KIK F+RE + +++L +CK++
Sbjct: 1200 ANNPVFHGKTKHFKIKLFFLREVQREGQVKLVYCKSE 1236
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 609 bits (1570), Expect(2) = 0.0
Identities = 331/808 (40%), Positives = 482/808 (59%), Gaps = 24/808 (2%)
Frame = +2
Query: 128 VFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXX 307
V GE Y+FWSIKMKT F +QDLWD+V NGY P++ + L KEN +KD
Sbjct: 132 VVEGECYEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARL--------KENTKKDSKALF 183
Query: 308 XXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETA 487
+ F +I A TAKEAW L+ FQG+ KV +LQ+LRR FE L M + E+
Sbjct: 184 FIQQAIHESIFSKIAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESX 243
Query: 488 KDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELM 667
+D+ SRV +VNQ+R+YGE+ + +V+K+L + T K+D ++A IEESKD+ + ELM
Sbjct: 244 QDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELM 303
Query: 668 GSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKN-------KKNGRKYNEGKPTDNNDKFP 826
GSL++HE RL +K+ + F +K KN + GR G+ +
Sbjct: 304 GSLQSHEVRLSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGAHGRGGRGRGRGD 363
Query: 827 PCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRH--QANFSENTEFENNLFY 1000
G ++ + ++ K C CK+FGHV+ C K+R QAN+ E E + LF
Sbjct: 364 AQGDQRQSTEKSRN---KSNIXCYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFM 420
Query: 1001 VCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDKI-STKIKIGNGDYMEATGKGTIAID 1177
+ + W+LDSGCSNHMT +S+F +LD+ +K+G+ ++ GKGT+A++
Sbjct: 421 AYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAVN 480
Query: 1178 TKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMR 1354
G + + V +P++ + L+ G YDKK +++ V+M
Sbjct: 481 NGHGNVKLLYNVYFIPSLTEKLVKCG----------------ATYDKKSDQIIVD-VRMA 523
Query: 1355 ENRCFPIQWRYANDAAMTA-QVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDG 1531
N+ FP++ A+ + +++ LWH R+GH N++GLK+L++K M+ +LP I ++
Sbjct: 524 ANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPKIDSVN- 582
Query: 1532 VCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMT 1711
VCEGC+ GKQ ++PFP G++ RA LE++H D+CGPM+T S +RYF+LF DD++RM+
Sbjct: 583 VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMS 642
Query: 1712 WVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLT 1891
WVYFL+ K++ F+ FKKFKA+VEKQSG IK +R+DR E+ S F FCE+EG+ +LT
Sbjct: 643 WVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELT 702
Query: 1892 VGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTP 2071
Y+PEQNGV+ERKNRTV+E ARSM+ K L FWAE V+TAVYLLN PTKAV ++TP
Sbjct: 703 TPYSPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTP 762
Query: 2072 VEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTR 2251
EAW GRKP HL+VFG + Y R KLDEK+ KCIF+GY +QSKGY++Y+ +
Sbjct: 763 YEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSG 822
Query: 2252 KLIISRDVMFDEDAAYNWETNQ----VEKRSINLPKLTHEQE--------ETSNDPPETP 2395
K+I+SR+V+FDE A+ W ++ VE S + + +Q+ T + P +P
Sbjct: 823 KIIVSRNVVFDEKASXTWRVSEDGALVEISSESEMAQSEDQQPSVQIPXSPTPSHSPSSP 882
Query: 2396 ERAXXXXXXXXXXXXXXXXRSLREIYQT 2479
+ RSLR+IY+T
Sbjct: 883 NLSXSSSSQSSEETPPRKFRSLRDIYET 910
Score = 550 bits (1417), Expect(2) = 0.0
Identities = 259/457 (56%), Positives = 339/457 (74%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IEKNETWEL +LP+DK IGVKWV++TK DGS+QK+KARLVAKGYAQQ+G+DY +TF+
Sbjct: 942 IEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFS 1001
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR +T+R L+ALAA W +YQ DVKSAFLNG L EE+Y QP+GF+V KE+ V RL
Sbjct: 1002 PVARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRL 1061
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
K ALYGLKQAPRAWYS+ID YF E GF +S+SEP LY+K QG N+ LI+ LYVDD+I+ G
Sbjct: 1062 KXALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMG 1121
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
++ ++I EFK M K FEM+DLGL+H+FLG+E+ Q +DG+F+SQ+KYA LLK+F M C
Sbjct: 1122 SSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNC 1181
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K VA P+++N+ L+ EDG+ +AD +FRSL+G L+YLT TRPDI +A +SRFM PS+
Sbjct: 1182 KVVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSK 1241
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H GA KR+LRY+ GT ++ IW V + KL+GYTDSDWAG ++D KSTSGY F+LGS
Sbjct: 1242 QHLGATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS-- 1299
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
AEY A + QA+WL+RIL D+ + E+ T I+CD+K+AIAM
Sbjct: 1300 -----------------AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAM 1342
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
KNP +H RTKH+ I+ HFIR+ ++ L++C T+
Sbjct: 1343 TKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTN 1379
Score = 145 bits (367), Expect = 2e-31
Identities = 72/154 (46%), Positives = 94/154 (61%)
Frame = +1
Query: 3403 MQNPSQIHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAF 3582
M S+ H GAA R+LRY+ GT ++ IWY V + KL+GYTDSDWAG +
Sbjct: 1 MHCSSKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGXV----------- 49
Query: 3583 TLGSGIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDS 3762
W SKKQA SS+EAEY A + QA+WL+RIL D+ + E+ T I+CD+
Sbjct: 50 -------CWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDN 102
Query: 3763 KSAIAMAKNPVFHNRTKHIKIKYHFIREAEANSE 3864
K+AIAM KNP +H RTKH+ I+ HFIR+ E
Sbjct: 103 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGE 136
>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
Length = 2041
Score = 598 bits (1541), Expect(2) = 0.0
Identities = 335/819 (40%), Positives = 459/819 (56%), Gaps = 12/819 (1%)
Frame = +2
Query: 83 GDTMADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQK 262
G M + S IPVF GE+Y W++KM+ Y +Q LW++V + P + + Q
Sbjct: 779 GANMTPSSNISSVIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEANPPPLGANPTVAQM 838
Query: 263 KEFKENQQKDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTL 442
K ++E + K D F +IM +T K+ WDKL QG
Sbjct: 839 KAYEEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQVWDKL----QG------------ 882
Query: 443 RRKFENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAI 622
+FE +E V +R L+T +++ +
Sbjct: 883 --EFEG----------------SERVKNVR---------------LLTLKREFE-----L 904
Query: 623 EESKDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKP 802
+ KD E + + G L ++ E D ++ ++Q +K KN R EG
Sbjct: 905 MKMKDDESVK--DYSGRLMDVVNQMRLLGEAFTDQKGKNSGNLQGKKFFKNSRGKAEG-- 960
Query: 803 TDNNDKFPPCGICKRKSHLEKDCWFKGKP--QCQNCKKFGHVEKSCRLKQR--------H 952
+ KFP C CKR +H EKDCW KGKP C C K GH EK CR K++ H
Sbjct: 961 SSRKGKFPXCSHCKRTNHAEKDCWHKGKPLFNCNFCNKLGHSEKYCRAKKKQSQQQPEQH 1020
Query: 953 QANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIG 1129
+ E + +LF QA S +TW +DSG ++HMTK+ SIF +D+ + K+K+G
Sbjct: 1021 ASVTXEEKNDDEHLFMASQALSSHELNTWLIDSGXTSHMTKHLSIFTSIDRSVQPKVKLG 1080
Query: 1130 NGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIY 1309
NG+ ++A GKGTIAI TK+G + + VL +P +DQNLLSV QM+ GY + F+ + C I
Sbjct: 1081 NGEXVQAKGKGTIAISTKRGTKIVTNVLYIPDLDQNLLSVAQMLRNGYXVSFKENFCFIS 1140
Query: 1310 DKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQK 1489
D I K+KM N F ++ +A+++++ +WH+R+ HFNL+ L+ + +
Sbjct: 1141 DVHGTE--IXKIKMNGNS-FYLKLDLVEGHVFSAKIDESVVWHKRYXHFNLKSLRFMQEA 1197
Query: 1490 NMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQN 1669
M+ D+P I CE C LGKQ RQPFP + RA LEL+H+DICGPM T S N
Sbjct: 1198 XMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNN 1257
Query: 1670 RYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQF 1849
YF LFIDD++RMTWVYFL+ KSQV +FK FK VE QSG +K +R+D G EYTS +F
Sbjct: 1258 VYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQXVKVLRTDNGGEYTSKEF 1317
Query: 1850 TKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYL 2029
+ FC++ G+ HQLT Y+P+ NGVSERKNRTVME AR ML EK LPK WAEAV+T+VYL
Sbjct: 1318 SVFCQEAGIVHQLTAPYSPQXNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYL 1377
Query: 2030 LNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYS 2209
LNR PTK+VQ KTP+EAWSG KPS KHL+VFG CY+H+P KRGKLDE+ EK +F+GY+
Sbjct: 1378 LNRLPTKSVQSKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYA 1437
Query: 2210 TQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLPKLTHEQ-EETSNDPP 2386
+SKGYR+YSLS K++ISRDV FDE++ + W+ +V K P + E T + P
Sbjct: 1438 AESKGYRIYSLSRMKIVISRDVHFDENSYWXWDLKKVHKCDQTTPSILEPAIESTIIEGP 1497
Query: 2387 ETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
E R L ++Y+ CNL EP
Sbjct: 1498 LDVEAT--------SDTPVLKMRPLFDVYERCNLVHAEP 1528
Score = 590 bits (1521), Expect(2) = 0.0
Identities = 280/457 (61%), Positives = 354/457 (77%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE+N TW+LT+LP+ K AIGVKWV++TK N DGS+ ++KARLV KG+AQ G+DY +TFA
Sbjct: 1551 IERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFA 1610
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR DTIR L+ALA Q WK+Y LDVKSAFLNG L EEIYV+QP+GF V G E KV +L
Sbjct: 1611 PVARHDTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKL 1670
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALYGLKQAPRAWYSRID + +LGFRRS++E TLY+K L+VSLYVDD++ TG
Sbjct: 1671 HKALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATLYLKQNDDGLQLVVSLYVDDMLVTG 1730
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+N ++ +FK +M FEM DLG+M+YFLG+EI+Q GIFISQ+KYA +LK+FK+E C
Sbjct: 1731 SNVKLLADFKMEMQDVFEMFDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESC 1790
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K VATPL N+ + K DG + S +RSL+GSLLYLT T+PD+M+ S LSRFM +PS
Sbjct: 1791 KEVATPLAQNEKISKNDGEKLEEPSAYRSLVGSLLYLTVTKPDLMFPASLLSRFMSSPSN 1850
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
+H G AKRVL+YL+GT N GIWY KL GY DSDWAGS+DDMKSTSGYAFT+GSG+
Sbjct: 1851 VHMGVAKRVLKYLKGTTNLGIWYLKTGGVKLDGYADSDWAGSVDDMKSTSGYAFTIGSGV 1910
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
W S+KQ VAQS+ EAEYI+ A +QAIWL+++L D+G+ Q T+++CD+KSAI++
Sbjct: 1911 ICWNSRKQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGQEQSSPTELYCDNKSAISI 1970
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
A+NPV H RTKHI +K+H IREAE NS ++L +C TD
Sbjct: 1971 AQNPVHHGRTKHINVKFHSIREAEKNSLVKLHYCSTD 2007
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 577 bits (1488), Expect(2) = 0.0
Identities = 319/807 (39%), Positives = 480/807 (59%), Gaps = 16/807 (1%)
Frame = +2
Query: 122 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 301
+PV NYD WS++MK A D+W+IV G+ P + +LS QK ++++++D
Sbjct: 10 VPVLTKSNYDNWSLQMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 302 XXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 481
++ F +++ A +AKEAW+KL+ ++G ++V+ RLQTLR +FE L+M + E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGEFEALQMKEGE 129
Query: 482 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 661
DY+SRV V N L+ GE + +I+ K+L + K++ I+ IEE+KD+E +T +
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 662 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGIC 841
L+GSL+A+E++ +++ ++ + L+M+ K ++NG+ Y + +
Sbjct: 190 LLGSLQAYEEKKKKK-----EDIVEQVLNMRITK-EENGQSYQRRGGGEVRGR------- 236
Query: 842 KRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASE 1021
R + W +P N + K K +AN+ E E ++ + +
Sbjct: 237 GRGGYGNGRGW---RPHEDNTNQRAPSNK----KFEEKANYVEEKIQEEDMLLMASYKKD 289
Query: 1022 ENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGK 1192
E ++ WYLDSG SNHM +S+F +LD+ + + +G+ ME GKG I I K G
Sbjct: 290 EQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGD 349
Query: 1193 -RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCF 1369
++I+ V +P++ N+LS+GQ++EKGY + + ++ +I D++ S +ITKV M +NR F
Sbjct: 350 HQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQE--SNLITKVPMSKNRMF 407
Query: 1370 PIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCE 1540
+ R ND A ++ ++WLWH RFGH N GL++L++K M+R LP I + VCE
Sbjct: 408 VLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCE 465
Query: 1541 GCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVY 1720
GC+LGKQ + FP + RA+KPLEL+HTD+CGP++ S
Sbjct: 466 GCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKS--------------------- 504
Query: 1721 FLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGY 1900
EKS+VF IFKKFKA+VEK+SG IKT+RSDRG E+TS +F K+CED G+ QLTV
Sbjct: 505 --LEKSEVFKIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPR 562
Query: 1901 APEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEA 2080
+P+QNGV+ERKNRT++E ARSML K LPK WAEAV+ AVYLLNR PTK+V KTP EA
Sbjct: 563 SPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEA 622
Query: 2081 WSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLI 2260
WSGRKP HLRVFG I + H+P +KR KLD+K+EK IF+GY SKGY++Y+ T+K I
Sbjct: 623 WSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTI 682
Query: 2261 ISRDVMFDEDAAYNWETNQVEKRSI-----NLPKLTHEQEETSNDPPETPERAXXXXXXX 2425
ISR+++FDE+ ++W +N+ + + P+ T E E S +P P
Sbjct: 683 ISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE-EPPSEEPTTRPTSLTSSQIEE 741
Query: 2426 XXXXXXXXXRSLREIYQTC----NLTI 2494
RS++E+Y+ NLT+
Sbjct: 742 SSSERTPRFRSIQELYEVTENQENLTL 768
Score = 550 bits (1418), Expect(2) = 0.0
Identities = 265/475 (55%), Positives = 352/475 (74%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
I+KN+TWELT LP +AIGVKWVYK K N G V++YKARLVAKGY+Q+ GIDY E FA
Sbjct: 800 IQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFA 859
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVARL+T+R +I+LAAQ +WKI+Q+D K AFLNG EEE+Y+EQPQG++V+G+EDKVLRL
Sbjct: 860 PVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEEDKVLRL 919
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KKALYGLKQAPRAW +RID YF E F + E LYIK Q + LI LYVDDLIFTG
Sbjct: 920 KKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTG 978
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
NN +M EFK++M K FEMTD+GLM Y+LGIE+ Q + IFI+Q+ YA+ +LK+FKM+
Sbjct: 979 NNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKFKMDDS 1038
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
V TP++ L K++ D + F+SL+GSL YLT TRPDI+YA +SR+M++P+
Sbjct: 1039 NPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTT 1098
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H+ AAKR+LRY++GT N+G+ Y + +D KL+GY+DSDW +DD KSTSG+ F +G
Sbjct: 1099 THFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFYIGDTA 1158
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
F+W SKKQ V S+ EAEY+AA AIWL+ +L+++ QE+ TKIF D+KSAIA+
Sbjct: 1159 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1218
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQKHYLEESLR 3945
AKNPVFH+R+KHI +YH+IRE + +++LE+ KT IF++ E+ ++
Sbjct: 1219 AKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1273
>gb|KYP50361.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1310
Score = 563 bits (1450), Expect(3) = 0.0
Identities = 311/810 (38%), Positives = 466/810 (57%), Gaps = 20/810 (2%)
Frame = +2
Query: 110 SSIPIP-VFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQ 286
+ IP+P + + NYD W ++MK +QD WD+V NGY P + Q K +
Sbjct: 6 NGIPLPKLTKDVNYDNWKLQMKALLGSQDNWDVVENGYEEPVTTEGYTNAQMNALKVARA 65
Query: 287 KDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLK 466
KD + F +I AK++KEAWD L++ +G+E+V+ RLQTLR + EN++
Sbjct: 66 KDKAALYLLYRAVDESGFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMR 125
Query: 467 MLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEK 646
M +SE ++ +RV V N+L GEN P S++V KIL + T+ ++ I+ AIEESKD+
Sbjct: 126 MKESEGVSEFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLST 185
Query: 647 LTATELMGSLEAHEKRLERRYEK--DIDNAFQSKLSMQSQK--NKKNGRKYNEGKPTDNN 814
LT EL GSLEA+E+R + + EK ++ A Q+K +++ +K +N R G+
Sbjct: 186 LTVEELTGSLEAYEQRKKNKKEKGESLEQALQAKATIKEEKVLYAQNNRGRGRGRGLG-- 243
Query: 815 DKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQ--ANFSENTEFEN 988
G + E +C+ +C NC GH+ K CR +++ + NF E E
Sbjct: 244 ------GRGRGGRGNEYECY---SIKCYNCGNLGHISKDCRSEKKKEEPTNFLAEEEDEG 294
Query: 989 NLFYVCQAASE-----ENKDTWYLDSGCSNHMTKNESIFCQLDKIST-KIKIGNGDYMEA 1150
L +E + WYLD+G SNHM +E +F L K + G+ +
Sbjct: 295 LLLVTTIPETEIKPSCTDNSVWYLDTGASNHMCGDEHLFKMLSKEEVGSVSFGDASKVTV 354
Query: 1151 TGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKS 1327
G+GTI + GK I +V VP + N+LS+GQ+MEKGYS+ + + DK +
Sbjct: 355 KGRGTIRYQQRNGKIGEIRDVYYVPDLKSNILSMGQLMEKGYSVLMKDRELQLKDKLGR- 413
Query: 1328 LVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWL-WHRRFGHFNLQGLKILNQKNMMRD 1504
++ +V+M++NR + ++ + D M + D + WHRRFGH + +GL L +K M+
Sbjct: 414 -LVAQVEMKKNRMYKLELKIVRDECMQLDLEDEAMKWHRRFGHLHFRGLTELVKKEMVIG 472
Query: 1505 LPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFIL 1684
LP ++ CE C++GK R FP +RAK+ L L+HTD+CGP+ S +YF+
Sbjct: 473 LPKMEFEKKFCEECVIGKHARTSFPRSSEYRAKEQLGLIHTDLCGPITPESFSGKKYFLS 532
Query: 1685 FIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCE 1864
FIDD++R TWVYFL+EK +VF+ FKKFK VEK++ +K +RSDRG E+TS +F K+CE
Sbjct: 533 FIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKETSKFVKAVRSDRGGEFTSFEFNKYCE 592
Query: 1865 DEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCP 2044
+ G++ LT Y+P+QNGV+ERKNRT+++ RSML K +PK FWAEAV AVY+ NRCP
Sbjct: 593 EHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAVYVQNRCP 652
Query: 2045 TKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKG 2224
+ +KTP E WSG KPS HLRVFG + Y +P+Q+R KL+++++K IF+GY +SK
Sbjct: 653 HAKLGEKTPQEIWSGMKPSVSHLRVFGSLAYGQVPRQQRTKLEDRSKKYIFIGYDEKSKA 712
Query: 2225 YRVYSLSTRKLIISRDVMFDEDAAYNWETN-QVEKRS----INLPKLTHEQEETSNDPPE 2389
Y+++ +K+++SRDV +E + W + +VE S I +P T E S++ E
Sbjct: 713 YKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEVETSSDSSDIVVPS-TITTTELSDEESE 771
Query: 2390 TPERAXXXXXXXXXXXXXXXXRSLREIYQT 2479
+ RSLREIY T
Sbjct: 772 LQQ---------------PRMRSLREIYDT 786
Score = 546 bits (1407), Expect(3) = 0.0
Identities = 261/466 (56%), Positives = 346/466 (74%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE+N+TWELT+LP+ IGVKWVYK KLN +G V++YKARLV KGY Q+ G+DY E FA
Sbjct: 824 IERNKTWELTNLPEGARPIGVKWVYKKKLNAEGEVERYKARLVVKGYKQKEGVDYDEVFA 883
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PV R+++IR LI+LAAQ+QWKI Q+DVKSAFLNG L+EE+YVEQP G++ +G+E KVLRL
Sbjct: 884 PVTRMESIRLLISLAAQRQWKILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGEEKKVLRL 943
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
+KALYGLKQAPRAW RID YF + G+ + E LYIK G + ++V+LYVDDLIFTG
Sbjct: 944 RKALYGLKQAPRAWNERIDGYFKKNGYEQCPYEHALYIKNSG-KDMMVVALYVDDLIFTG 1002
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+N +I EFKE M K FEMTDLGLM YFLG+E+ Q +GIFISQ++YA +LK+FKME C
Sbjct: 1003 SNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLEVKQSDEGIFISQERYALEILKKFKMEDC 1062
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
V+TP++ L K DG +AD+ ++RSL+GSL YLT+TRPD+M + SRFM++PS
Sbjct: 1063 NPVSTPMEPGTKLSKFDGGDRADSGRYRSLVGSLRYLTSTRPDLMLSVGITSRFMEDPSY 1122
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H+ A KR+LRY+ G+ + G++Y D +L+GY+DSDW G +DD KSTSGY F LG+
Sbjct: 1123 THWKALKRILRYVRGSLSLGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTA 1182
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
F+W SKK+ V S+ EAEY+AA+ + A+WL +L MG +++KA I D+KSAI +
Sbjct: 1183 FTWLSKKKPIVTLSTCEAEYVAASWSVCHAVWLSNLLRHMGVIRDKAIVIRVDNKSAIEL 1242
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQ 3918
AKNPV H R+KHI +++HFIRE ++ELEH + IF++
Sbjct: 1243 AKNPVNHGRSKHIDVRFHFIREQIGQGKVELEHVGSRVQAADIFTK 1288
Score = 26.6 bits (57), Expect(3) = 0.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 3897 QLADIFTKALPRGKFEILRDMIGVTE 3974
Q ADIFTK+LP E + +IG+ +
Sbjct: 1281 QAADIFTKSLPTTLLENCKKLIGMRD 1306
>emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera]
Length = 1798
Score = 615 bits (1587), Expect(2) = 0.0
Identities = 329/743 (44%), Positives = 453/743 (60%), Gaps = 18/743 (2%)
Frame = +2
Query: 329 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 508
D F IM +T K WDKLQ EF+G+E+V+ RL TL+++FE +KM D E+ KDY R+
Sbjct: 263 DHIFTEIMNLETPKLVWDKLQGEFEGSERVKTVRLLTLKKEFELMKMKDDESVKDYSGRL 322
Query: 509 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 688
+VVNQ+R GE F + K+V KI+++ +K++ I+AIEES D++ LT EL L A E
Sbjct: 323 MDVVNQIRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEESYDLQTLTIVELTSKLHAQE 382
Query: 689 KRLERRYEKDIDNAFQ------SKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRK 850
+R+ R ++ I+ AFQ + ++Q +K KN ++ +EG + KFP C C+R
Sbjct: 383 QRVLMRGDEAIEGAFQVNHKGKNSGNLQGKKFFKNNKEKSEG--SSRKGKFPSCSHCRRT 440
Query: 851 SHLEKDCWFKGKP--QCQNCKKFGHVEKSCRLK-----QRHQANFSENTEFENN---LFY 1000
+H EKDCW KGKP C K GH EK C+ K Q+ + N S E +N+ LF
Sbjct: 441 NHAEKDCWHKGKPLFNCNFYNKLGHSEKYCKXKKKQSQQQPEQNASVTKEDKNDDEHLFM 500
Query: 1001 VCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAID 1177
QA S +TW +DSGC++HMTK SIF +D+ + K+K+GNG+ ++ GKGTIAI
Sbjct: 501 ASQALSSHXLNTWLIDSGCTSHMTKYPSIFTSIDRSVQPKVKLGNGEVVQVKGKGTIAIS 560
Query: 1178 TKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRE 1357
TK+G + + VL +P +DQNLLSV QM+ GY++ F+ + C I + +K TK+KM
Sbjct: 561 TKRGTKIVTNVLYIPDLDQNLLSVAQMLRNGYAISFKENFCFITNVHEKET--TKIKMNG 618
Query: 1358 NRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVC 1537
N F ++ +A+++++ +WH+R+GHFNL+ L+ + + M+ D+P I C
Sbjct: 619 NS-FYLKLDLVEGHVFSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTC 677
Query: 1538 EGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWV 1717
E C LGKQ RQPFP + RA LEL+H+DICGPM T S N V
Sbjct: 678 ESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTASLSNN---------------V 722
Query: 1718 YFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVG 1897
YFL+ KSQV +FK FK VE QSG +K +R+D G EY S +F FC++ G+ HQLT
Sbjct: 723 YFLKTKSQVLSVFKSFKKMVETQSGQNVKVLRTDNGGEYISKEFNVFCQEAGIVHQLTAP 782
Query: 1898 YAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVE 2077
Y+P+QNGVSERKNRTVME AR ML EK LPK WAEAV+T++YLLNR PTK+V+ KTP+E
Sbjct: 783 YSPQQNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTSIYLLNRLPTKSVKSKTPIE 842
Query: 2078 AWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKL 2257
AWSG KPS KHL KRGKLDE+ EK +F+ Y+ +SKGYR+YSLS K+
Sbjct: 843 AWSGVKPSVKHL--------------KRGKLDERAEKGVFVRYAAESKGYRIYSLSRMKI 888
Query: 2258 IISRDVMFDEDAAYNWETNQVEKRSINLPKLTHEQ-EETSNDPPETPERAXXXXXXXXXX 2434
+ISRDV FDE++ +NW+ +V K P + E T + P E
Sbjct: 889 VISRDVHFDENSYWNWDLKKVHKCDQTTPSILEPAIERTIIEGPLDVEAT--------SD 940
Query: 2435 XXXXXXRSLREIYQTCNLTIMEP 2503
R L ++Y+ CNL EP
Sbjct: 941 TPVLKMRPLSDMYERCNLVHAEP 963
Score = 495 bits (1274), Expect(2) = 0.0
Identities = 245/457 (53%), Positives = 314/457 (68%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE+N TW+LT+LP+ K AIGVKWV++TK N +GS+ K+KARLV KG+AQ G+DY +TFA
Sbjct: 986 IERNGTWKLTELPEAKNAIGVKWVFRTKFNSNGSIFKHKARLVVKGFAQVAGVDYGDTFA 1045
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PVAR DTIR L+ALA Q WK+Y LDVKSAFLNG L EEIYV+QP+GF V G E KV +L
Sbjct: 1046 PVARHDTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVFKL 1105
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KALY VSLYVDD++ TG
Sbjct: 1106 HKALY-------------------------------------------VSLYVDDMLVTG 1122
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+N ++ +FK +M FEM+DLG+M+YFLG+EI+Q GIFISQ+KYA +LK+FK+E C
Sbjct: 1123 SNVKLLADFKMEMQDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESC 1182
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K VATPL N+ + K DG + S +RSL+ SLLYLT TRPD+M+ S LSRF+ +P
Sbjct: 1183 KEVATPLAQNEKISKNDGEKLEEPSAYRSLVSSLLYLTITRPDLMFPASLLSRFLSSPRN 1242
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
+H G AKRVL+Y++GT N GIWY KL GY DSDWAGS+DDMKS SGY FT+GSG+
Sbjct: 1243 VHMGVAKRVLKYVKGTTNLGIWYLKTGGVKLDGYXDSDWAGSVDDMKSXSGYVFTIGSGV 1302
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
W S+KQ VAQS+ EAEYI+ A +QAIWL+++L D+G+ Q ++CD+KS I++
Sbjct: 1303 ICWNSRKQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGQEQSSPXXLYCDNKSVISI 1362
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
+N V H RTKHI +K+H IREAE NS ++L +C TD
Sbjct: 1363 TQNLVQHGRTKHINVKFHSIREAEKNSLVKLHYCATD 1399
>gb|KYP35753.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1318
Score = 559 bits (1440), Expect(3) = 0.0
Identities = 311/818 (38%), Positives = 465/818 (56%), Gaps = 28/818 (3%)
Frame = +2
Query: 110 SSIPIP-VFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQ 286
+ IP+P + + NYD W ++MK +QD WD+V NGY P + Q K +
Sbjct: 6 NGIPLPKLTKDVNYDNWKLQMKALLGSQDNWDVVENGYEEPVTTEGYTNAQLNALKVARA 65
Query: 287 KDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLK 466
KD + F +I AK++KEAWD L++ +G+E+V+ RLQTLR + EN++
Sbjct: 66 KDKATLYLLYRAVDESSFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMR 125
Query: 467 MLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEK 646
M +SE ++ +RV V N+L GEN P S++V KIL + T+ ++ I+ AIEESKD+
Sbjct: 126 MKESEGVSEFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLST 185
Query: 647 LTATELMGSLEAHEKRLERRYEK--DIDNAFQSKLSMQSQK--NKKNGRKYNEGKPTDNN 814
LT EL GSLEA+E+R + + EK ++ A Q+K +++ +K +N R G+
Sbjct: 186 LTVEELTGSLEAYEQRKKNKKEKGESLEQALQAKATIKEEKVLYAQNNRGRGRGRGLG-- 243
Query: 815 DKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQ--ANFSENTEFEN 988
G + E +C+ +C NC GH+ K CR +++ + NF E E
Sbjct: 244 ------GRGRGGRGNEYECY---SIKCYNCGNLGHISKDCRSEKKKEEPTNFLAEEEDEG 294
Query: 989 NLFYVCQAASE-------------ENKDTWYLDSGCSNHMTKNESIFCQLDKIST-KIKI 1126
L +E + WYLD+G SNHM +E +F L K +
Sbjct: 295 LLLVTTIPETEIKPSCSSEIKPSCTDNSVWYLDTGASNHMCGDEHLFKMLSKEEVGSVSF 354
Query: 1127 GNGDYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCT 1303
G+ + G+GTI + GK I +V VP + N+LS+GQ+MEKGYS+ +
Sbjct: 355 GDASKVTVKGRGTIRYQQRNGKIGEIRDVYYVPDLRSNILSMGQLMEKGYSVLMKDRELQ 414
Query: 1304 IYDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWL-WHRRFGHFNLQGLKIL 1480
+ DK + ++ +V+M++NR + ++ + D M + D + WHRRFGH + +GL L
Sbjct: 415 LKDKLGR--LVAQVEMKKNRMYKLELKIVRDECMQLDLEDEAMKWHRRFGHLHFRGLTEL 472
Query: 1481 NQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSN 1660
+K M+ LP ++ CE C++GK R FP +RAK+ L L+HTD+CGP+ S
Sbjct: 473 VKKEMVIGLPKMEFEKKFCEECVIGKHARTSFPRSSEYRAKEQLGLIHTDLCGPITPESF 532
Query: 1661 EQNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTS 1840
+YF+ FIDD++R TWVYFL+EK +VF+ FKKFK VEK+ +K +RSDRG E+TS
Sbjct: 533 SGKKYFLSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKEMSTFVKAVRSDRGGEFTS 592
Query: 1841 TQFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTA 2020
+F K+CE+ G++ LT Y+P+QNGV+ERKNRT+++ RSML K +PK FWAEAV A
Sbjct: 593 VEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCA 652
Query: 2021 VYLLNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFL 2200
VY+ NRCP + +KTP E WSG KPS HLRVFG + Y +P+Q+R KL+++++K IF+
Sbjct: 653 VYVQNRCPHAKLGEKTPQEIWSGMKPSVSHLRVFGSLAYGQVPRQQRTKLEDRSKKYIFI 712
Query: 2201 GYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETN-QVEKRS----INLPKLTHEQE 2365
GY +SK Y+++ +K+++SRDV +E + W + +VE S I +P T
Sbjct: 713 GYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEVETSSDSSDIVVPS-TITTT 771
Query: 2366 ETSNDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQT 2479
E S++ E + RSLREIY T
Sbjct: 772 ELSDEESELQQ---------------PRMRSLREIYDT 794
Score = 546 bits (1406), Expect(3) = 0.0
Identities = 261/466 (56%), Positives = 346/466 (74%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE+N+TWELT+LP+ IGVKWVYK KLN +G V++YKARLV KGY Q+ G+DY E FA
Sbjct: 832 IERNKTWELTNLPEGARPIGVKWVYKKKLNAEGEVERYKARLVVKGYKQKEGVDYDEVFA 891
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PV R+++IR LI+LAAQ+QWKI Q+DVKSAFLNG L+EE+YVEQP G++ +G+E KVLRL
Sbjct: 892 PVTRMESIRLLISLAAQRQWKILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGEEKKVLRL 951
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
+KALYGLKQAPRAW RID YF + G+ + E LYIK G + ++V+LYVDDLIFTG
Sbjct: 952 RKALYGLKQAPRAWNERIDGYFKKNGYEQCPYEHALYIKNSG-KDMMVVALYVDDLIFTG 1010
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+N +I EFKE M K FEMTDLGLM YFLG+E+ Q +GIFISQ++YA +LK+FKME C
Sbjct: 1011 SNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLEVKQSDEGIFISQERYALEILKKFKMEDC 1070
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
V+TP++ L K DG +AD+ ++RSL+GSL YLT+TRPD+M + SRFM++PS
Sbjct: 1071 NPVSTPMEPGTKLSKFDGGDRADSGRYRSLVGSLRYLTSTRPDLMLSVGITSRFMEDPSY 1130
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H+ A KR+LRY+ G+ + G++Y D +L+GY+DSDW G +DD KSTSGY F LG+
Sbjct: 1131 THWKALKRILRYVRGSLSLGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTA 1190
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
F+W SKKQ V S+ EAEY+AA+ + A+WL +L MG ++++A I D+KSAI +
Sbjct: 1191 FTWLSKKQPIVTLSTCEAEYVAASWSVCHAVWLSNLLRHMGVIRDEAIVIRVDNKSAIEL 1250
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQ 3918
AKNPV H R+KHI +++HFIRE ++ELEH + IF++
Sbjct: 1251 AKNPVNHGRSKHIDVRFHFIREQIRQGKVELEHVGSRVQAADIFTK 1296
Score = 25.8 bits (55), Expect(3) = 0.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 3897 QLADIFTKALPRGKFEILRDMIGVTE 3974
Q ADIFTK LP E + +IG+ +
Sbjct: 1289 QAADIFTKPLPTTLLENCKKLIGMRD 1314
>emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]
Length = 1220
Score = 631 bits (1628), Expect(3) = 0.0
Identities = 343/820 (41%), Positives = 475/820 (57%), Gaps = 16/820 (1%)
Frame = +2
Query: 92 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 271
M+ + +S IPVF GE+Y W++KM+ Y +Q LW++V + P + + Q K +
Sbjct: 1 MSPSSNTSSVIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEDDPPPLGANPTVAQMKAY 60
Query: 272 KENQQKDXXXXXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRK 451
+E + K D F +IM +T K+ R+
Sbjct: 61 EEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQ------------------------RE 96
Query: 452 FENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEES 631
FE +KM D E+ KDY R+ +VVNQ+R GE F + K+V KI+++ +K++ I+AIEES
Sbjct: 97 FELMKMKDDESVKDYSGRLMDVVNQMRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEES 156
Query: 632 KDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGR--KYNEGKPT 805
D++ LT EL L A E+R+ R +K + AFQ+ ++ N + + K N+GK
Sbjct: 157 CDLQTLTIVELTSKLHAQEQRVLMRGDKATEGAFQANHKGKNSGNLQGKKFFKNNKGKVE 216
Query: 806 --DNNDKFPPCGICKRKSHLEKDCWFKGKP--QCQNCKKFGHVEKSCRLKQRHQAN---- 961
KFP C C+R +H EKDCW KGKP C C K H EK CR K++
Sbjct: 217 GFSRKGKFPSCFHCRRTNHAEKDCWNKGKPLFNCNFCNKLCHSEKYCRAKKKQSQQQPEK 276
Query: 962 ----FSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKI 1126
EN + +LF Q S +TW +DSGC++HMTK SIF +D+ + K+K+
Sbjct: 277 NASVIEENKNDDEHLFMASQTLSSHELNTWLIDSGCTSHMTKYLSIFTSIDRSVQPKVKL 336
Query: 1127 GNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTI 1306
GNG+ ++A GKGTIAI TK+G + + VL +P +DQNLLSV QM+ GY++ F+ + C I
Sbjct: 337 GNGEVVQAKGKGTIAISTKRGTKIVTNVLYIPDLDQNLLSVAQMLRNGYAVSFKENFCFI 396
Query: 1307 YDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQ 1486
+ ++K I K+KM N F ++ +A+++++ +WH+ +GHFNL+ L+ + +
Sbjct: 397 TNVQEKE--IAKIKMNGN-IFYLKLDLVEGHVFSAKIDESVVWHKSYGHFNLKSLRFMQE 453
Query: 1487 KNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQ 1666
M+ D+ I CE C LGKQ RQPFP + RA LEL+H+ ICGPM S
Sbjct: 454 AGMVEDMLEISVNAQTCESCELGKQQRQPFPQNMSKRATHELELIHSYICGPMSIASLSN 513
Query: 1667 NRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQ 1846
N YF LFIDD +RMTWVYFL+ KSQV +FK FK VE QSG +K + D G EY S +
Sbjct: 514 NVYFALFIDDLSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKVLIIDNGGEYISKE 573
Query: 1847 FTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVY 2026
F LT Y P+QN VSERKN+TVME AR ML EK LPK WAEAV+T+VY
Sbjct: 574 FN-----------LTAPYLPQQNEVSERKNKTVMEMARCMLFEKRLPKLLWAEAVNTSVY 622
Query: 2027 LLNRCPTKAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGY 2206
LLNR PTK+VQ KTP+EAW G KPS KHL+VFG +CY+H+P KRGKLDE+ EK +F+GY
Sbjct: 623 LLNRLPTKSVQSKTPIEAWFGVKPSVKHLKVFGSLCYLHVPSVKRGKLDERAEKGVFVGY 682
Query: 2207 STQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLPKLTHEQ-EETSNDP 2383
+ +SKGYR+YSLS K++ISRDV FDE++ +NW+ +V K N P + E +
Sbjct: 683 AAESKGYRIYSLSRMKIVISRDVHFDENSYWNWDLKKVHKCDQNTPSILEPAIESIIIEG 742
Query: 2384 PETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEP 2503
P E R L ++Y+ CNL EP
Sbjct: 743 PLDVEAT--------SDTPMLKMRPLSDVYERCNLVHAEP 774
Score = 451 bits (1160), Expect(3) = 0.0
Identities = 231/457 (50%), Positives = 301/457 (65%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
IE+N TW+LT+LP+ K AIGVKWV++TK N DGS+ ++KARLV KG+AQ +DY +TFA
Sbjct: 797 IERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVARVDYGDTFA 856
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
VA+ DTIR L+ALA+Q WK+Y L+VKSAFLNG L EEIYV+QP+GF V G E KV +L
Sbjct: 857 LVAKHDTIRLLLALASQMGWKVYHLNVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKL 916
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KA+YGLKQAPRAWYSRID + +LGFRRS++E TLY+K L+VSLYVDD++ TG
Sbjct: 917 HKAVYGLKQAPRAWYSRIDSHLIQLGFRRSENEATLYLKQNDDGLQLVVSLYVDDMLVTG 976
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
+N ++ +FK +M FEM+DLG+M+YFLG+EI+Q GIFISQ+KYA +LK+FK+E C
Sbjct: 977 SNVKLLADFKMEMQDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESC 1036
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
K VATPL N+ + K DG + +RSL+
Sbjct: 1037 KEVATPLAQNEKISKNDGEKLEEPFAYRSLL----------------------------- 1067
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
K G+ KL GY DSDWAGS+DDMKSTSGY FT+GSG+
Sbjct: 1068 ----------------KTGGV--------KLDGYADSDWAGSVDDMKSTSGYVFTIGSGV 1103
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
W S+KQ VAQS+ EAEYI+ A +QAIWL+++L D+G+ Q T+++CD
Sbjct: 1104 ICWNSRKQEVVAQSTIEAEYISLAAAANQAIWLRKLLADLGQEQSSPTELYCD------- 1156
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTD 3891
N+TKHI +K+H IREAE NS ++L +C TD
Sbjct: 1157 -------NKTKHINVKFHSIREAETNSLVKLHYCSTD 1186
Score = 36.6 bits (83), Expect(3) = 0.0
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 3894 EQLADIFTKALPRGKFEILRDMIGVTEICTKEE 3992
EQLADI TK LP+ + E LR +G+++ KEE
Sbjct: 1187 EQLADIMTKGLPKSRLEFLRLKLGMSKANLKEE 1219
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 574 bits (1480), Expect(3) = 0.0
Identities = 317/811 (39%), Positives = 465/811 (57%), Gaps = 23/811 (2%)
Frame = +2
Query: 122 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 301
+P F G+N++ WSI+MK + +Q+LWDIV GYT + S L+ Q E +EN+ KD
Sbjct: 12 LPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRNKDKKA 71
Query: 302 XXXXXXXXXDEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 481
+ RI A +AK AWD L+ +QG +KV+ RLQ LR +F+ +KM ++E
Sbjct: 72 LFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFDCIKMKETE 131
Query: 482 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 661
T +++++ + +VN LR+ GE + ++V KIL + K++ I+ AIEESKD+ L+
Sbjct: 132 TIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINS 191
Query: 662 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNG--------RKYNE--GKPTDN 811
LMGSL++HE RL ++++ + + AFQ + S + + G R Y+ G ++N
Sbjct: 192 LMGSLQSHELRL-KQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSEN 250
Query: 812 NDKFPPC----GICKRKSHLEKDCWFKG---KPQCQNCKKFGHVEKSCRLKQRHQANFSE 970
+ + G +R+ +G + QC NC+K+GH + C + N +
Sbjct: 251 SQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWALKNGVGNTTM 310
Query: 971 NTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDKISTKIKIGNGDYMEA 1150
N E ++ D L CS Q + + + G+ ++
Sbjct: 311 NMHKE-----------QKKNDEGILFLACS----------VQDNVVKPTCEDGDNTRLQV 349
Query: 1151 TGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSL 1330
G+G I + TKK + + V VP + NLLS+GQ++++G + FEGD C I D+ D +
Sbjct: 350 KGQGDILVKTKKRTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAD--V 407
Query: 1331 VITKVKMRENRCFPIQWRYANDAAMTAQVNDT-WLWHRRFGHFNLQGLKILNQKNMMRDL 1507
+I+KVKM N+ FP+ + Y + ++ + D+ WLWH R+GH N + L L + +M+R
Sbjct: 408 LISKVKMTANKMFPLNFTYGQISCFSSILKDSSWLWHFRYGHLNFKSLSYLCKNHMVRV- 466
Query: 1508 PTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILF 1687
C+L K HR FP+GKAWRA KPLEL+HTD+CGPMRT +N NRYFI F
Sbjct: 467 ------------CILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITF 514
Query: 1688 IDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCED 1867
IDD++R W+YFL+EKS+ FK FKA+ E QSG+KIKT+RSDRG EY F F ++
Sbjct: 515 IDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIV--FGNFFKE 572
Query: 1868 EGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPT 2047
+G+ HQ+T +QNGV+ERKNRT+ME ARSML K LP FW +AV+ VY+LNR PT
Sbjct: 573 QGIHHQMTARMTTQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPT 632
Query: 2048 KAVQDKTPVEAWSGRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGY 2227
K+V TP EAW KPS HL+VF I Y HIP Q RGKLD+K+EKCI +GY+ SK Y
Sbjct: 633 KSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAY 692
Query: 2228 RVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRS-----INLPKLTHEQEETSNDPPET 2392
R+Y+ +RK+II+RDV+F ED ++NW + E +S IN ++ E E+ E+
Sbjct: 693 RLYNPVSRKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVES 752
Query: 2393 PERAXXXXXXXXXXXXXXXXRSLREIYQTCN 2485
+ RS++EIY N
Sbjct: 753 -SSSSTSSSTSNDEISPRRMRSIQEIYNNTN 782
Score = 519 bits (1336), Expect(3) = 0.0
Identities = 250/466 (53%), Positives = 337/466 (72%)
Frame = +1
Query: 2521 IEKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFA 2700
I +NETWEL +LP +K+A+GVKWVY+TKL DG+V+ YKARLV KGY Q+YG+DY E FA
Sbjct: 823 IRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFA 882
Query: 2701 PVARLDTIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRL 2880
PV R++TIR +++LAAQ WK++Q+D+KSAFLNG+L++EI+V QP G+V +G+E+KV +L
Sbjct: 883 PVTRIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKL 942
Query: 2881 KKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTG 3060
KKALYGLKQAPRAWYSRID +F + GFRR E LY+K LIVSLY
Sbjct: 943 KKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLY-------- 994
Query: 3061 NNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGC 3240
M+D+GL+HYFLGIE++Q + I ISQ+KYA LLK+F+ME
Sbjct: 995 ------------------MSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENA 1036
Query: 3241 KTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQ 3420
TP+D N L K+D D S +RSL+GSL+YLTATRPDI++ S LSRFM NP +
Sbjct: 1037 SPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLSRFMTNPKR 1096
Query: 3421 IHYGAAKRVLRYLEGTKNYGIWYESVTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGI 3600
H+ A KRVLRY+ GT N+GI+Y+ V++S L G+ DSDW G++DD +STSGY F++GSG+
Sbjct: 1097 SHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHRSTSGYVFSMGSGV 1156
Query: 3601 FSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAM 3780
FSW SKKQ+ V S+ EAEYI+ A QA+WL+ +L+++ Q+ T +FCD+ SAIA+
Sbjct: 1157 FSWTSKKQSVVTLSTTEAEYISLAAAGCQALWLRWMLKELKCTQKCETVLFCDNGSAIAL 1216
Query: 3781 AKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDTNN*QIFSQ 3918
+KNPVFH R+KHI+IKYHFI++ + E+ +++CKT IF++
Sbjct: 1217 SKNPVFHGRSKHIRIKYHFIKDLVKDGEVIVKYCKTQDQVADIFTK 1262
Score = 25.4 bits (54), Expect(3) = 0.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 3894 EQLADIFTKALPRGKFEILRDMIGVTEI 3977
+Q+ADIFTKA F R +GV ++
Sbjct: 1254 DQVADIFTKAQKFDLFVKFRGKLGVAQV 1281