BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00013211
         (3488 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012855762.1| PREDICTED: replication factor C subunit 1 [E...  1115   0.0  
ref|XP_012854690.1| PREDICTED: replication factor C subunit 1-li...  1088   0.0  
ref|XP_010651545.1| PREDICTED: replication factor C subunit 1 [V...  1081   0.0  
ref|XP_009361448.1| PREDICTED: replication factor C subunit 1 is...  1031   0.0  
ref|XP_010031591.1| PREDICTED: replication factor C subunit 1 [E...  1029   0.0  
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca...  1028   0.0  
ref|XP_009361449.1| PREDICTED: replication factor C subunit 1 is...  1026   0.0  
ref|XP_009361447.1| PREDICTED: replication factor C subunit 1 is...  1026   0.0  
ref|XP_008237210.1| PREDICTED: replication factor C subunit 1 is...  1025   0.0  
ref|XP_008237211.1| PREDICTED: replication factor C subunit 1 is...  1024   0.0  
ref|XP_008237208.1| PREDICTED: replication factor C subunit 1 is...  1024   0.0  
ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prun...  1024   0.0  
ref|XP_008237209.1| PREDICTED: replication factor C subunit 1 is...  1023   0.0  
ref|XP_008375618.1| PREDICTED: replication factor C subunit 1 [M...  1021   0.0  
ref|XP_008790175.1| PREDICTED: replication factor C subunit 1 is...  1018   0.0  
ref|XP_008790185.1| PREDICTED: replication factor C subunit 1 is...  1018   0.0  
ref|XP_010094821.1| Replication factor C subunit 1 [Morus notabi...  1014   0.0  
ref|XP_008356392.1| PREDICTED: replication factor C subunit 1-li...  1013   0.0  
ref|XP_008356391.1| PREDICTED: replication factor C subunit 1-li...  1013   0.0  
ref|XP_008356388.1| PREDICTED: replication factor C subunit 1-li...  1013   0.0  

>ref|XP_012855762.1| PREDICTED: replication factor C subunit 1 [Erythranthe guttata]
            gi|604302553|gb|EYU22111.1| hypothetical protein
            MIMGU_mgv1a000730mg [Erythranthe guttata]
          Length = 1000

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 584/746 (78%), Positives = 626/746 (83%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGAA+CLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGS+
Sbjct: 220  FMNFGERKDPPHKGEKEVPEGAANCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 279

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDIGGRKS KAKELGT FLTEDGLFD+IR+SNKSKP              
Sbjct: 280  SKKTNYLLCDEDIGGRKSEKAKELGTAFLTEDGLFDIIRSSNKSKPAAQVPNKRVDKV-- 337

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVPND 2190
            A               QAG   SDTK   S A S KRK++P+AQ  LPWTEKYRPKVPND
Sbjct: 338  ATPAPKKSPQKSEKTKQAG---SDTKGPVSVAASPKRKNQPAAQTSLPWTEKYRPKVPND 394

Query: 2189 IVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAKLV 2010
            IVGNQSLVKQLHDWLV WN+QFLNT                AVLLSGTPGIGKTTSAKL+
Sbjct: 395  IVGNQSLVKQLHDWLVSWNEQFLNTGKKEKGKKQSDSGPKKAVLLSGTPGIGKTTSAKLI 454

Query: 2009 SQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTVLI 1830
            SQMLGF+AIEVNASDSRGKADAKI+KGIGGSTSNS+KELVSNE+LS  MER+Q  KTVLI
Sbjct: 455  SQMLGFQAIEVNASDSRGKADAKIQKGIGGSTSNSVKELVSNESLSHKMERTQQQKTVLI 514

Query: 1829 MDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTKQQ 1650
            MDEVDGMSAGDRGGVADL              CNDRYSQKLKSL+NYCLLLSFRKPTKQQ
Sbjct: 515  MDEVDGMSAGDRGGVADLIASIKISKVPIICICNDRYSQKLKSLMNYCLLLSFRKPTKQQ 574

Query: 1649 MAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQS 1470
            MAKRLSHIA AEG+QVNEIALEELAER NGDIRMA+NQLQYMSLSMSVIKFDDIKQRLQS
Sbjct: 575  MAKRLSHIAKAEGIQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVIKFDDIKQRLQS 634

Query: 1469 SSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGKDD 1290
            SSKDEDISPFTAVDKLFGFN GKLRMDERIDLSMSDPDLVPLLIQENYINYRP++AGKDD
Sbjct: 635  SSKDEDISPFTAVDKLFGFNAGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSAGKDD 694

Query: 1289 NGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLEQG 1110
            NGMKRMSL+ARAAESIGDGDI+NVQIRRYRQWQLSQ GSL SCI PAALLHG RE LEQG
Sbjct: 695  NGMKRMSLIARAAESIGDGDIINVQIRRYRQWQLSQFGSLTSCIIPAALLHGSREILEQG 754

Query: 1109 ERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTDPL 930
            ERN+NRFGGWLGKNSTMGKNYRLLEDLHVHLL SRES+LGRAT+RLD LT+LLKRLTDPL
Sbjct: 755  ERNFNRFGGWLGKNSTMGKNYRLLEDLHVHLLTSRESDLGRATIRLDCLTLLLKRLTDPL 814

Query: 929  RMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYNKG 750
            R+LPKDEAVE VV+FMD YSISMED+DTI+EMSKFKGHPNPLDGIQPAVKAALTR YNKG
Sbjct: 815  RVLPKDEAVETVVKFMDSYSISMEDYDTIVEMSKFKGHPNPLDGIQPAVKAALTRAYNKG 874

Query: 749  SSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXXXXX 570
            SS RVVRAADL+T+   KKAPKKR+AAMLEP++ ++A EN E                  
Sbjct: 875  SSLRVVRAADLVTISNFKKAPKKRIAAMLEPLEGSLAEENEEG----TPSDDENQDDDLD 930

Query: 569  XXXEKKLQSNLESLNSKGIKVQMDLK 492
               +K ++SNLESLNSK IKV+++LK
Sbjct: 931  DLKKKSVESNLESLNSKAIKVELELK 956



 Score =  164 bits (414), Expect = 2e-37
 Identities = 91/149 (61%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
 Frame = -1

Query: 3404 SQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYF 3225
            SQDIRKWFMK+HEK +GNG+                  +P K+V+ VQE SGRRKTSKYF
Sbjct: 2    SQDIRKWFMKKHEKDSGNGSASNQAKPSTPE------KRPGKMVEEVQELSGRRKTSKYF 55

Query: 3224 AKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTSRK 3045
            AKDGQ  KDEM+VEE  AKK  +    E VS+VKPP GK+T KLE DD+D+DF  PTSRK
Sbjct: 56   AKDGQGVKDEMDVEEAPAKKTAK----ELVSNVKPPTGKRTLKLENDDDDDDF-APTSRK 110

Query: 3044 GST--TPNKKLKSGSGKGVAQKMVDEIDE 2964
             S   TPNKKLKSGSGKGVAQK+ DE +E
Sbjct: 111  SSVSITPNKKLKSGSGKGVAQKIADETNE 139


>ref|XP_012854690.1| PREDICTED: replication factor C subunit 1-like [Erythranthe guttata]
          Length = 913

 Score = 1088 bits (2813), Expect = 0.0
 Identities = 563/702 (80%), Positives = 603/702 (85%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGAA+CLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGS+
Sbjct: 185  FMNFGERKDPPHKGEKEVPEGAANCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 244

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDIGGRKS KAKELGT FLTEDGLFD+IRASNKSKP              
Sbjct: 245  SKKTNYLLCDEDIGGRKSEKAKELGTAFLTEDGLFDIIRASNKSKPAAQVPNKRVDKV-- 302

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVPND 2190
            A               QAG   SDTK   S A S KRK++P+AQ  LPWTEKYRPKVPND
Sbjct: 303  ATPVPKKSPQKSEKTKQAG---SDTKGPVSVAASPKRKNQPAAQTSLPWTEKYRPKVPND 359

Query: 2189 IVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAKLV 2010
            IVGNQSLVKQLHDWLV WN+QFLNT                AVLLSGTPGIGKTTSAKL+
Sbjct: 360  IVGNQSLVKQLHDWLVSWNEQFLNTGKKEKGKKQSDSGPKKAVLLSGTPGIGKTTSAKLI 419

Query: 2009 SQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTVLI 1830
             QMLGF+AIEVNA DSRG+ADA+I+KGIGGSTSNS+KELVSNE+LS  MER+Q  KTVLI
Sbjct: 420  RQMLGFQAIEVNAIDSRGQADAQIQKGIGGSTSNSVKELVSNESLSHKMERTQQQKTVLI 479

Query: 1829 MDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTKQQ 1650
            MDEVDGMSAGDRGGVADL              CNDRYSQKLKSL+NYCLLLSFRKPTKQQ
Sbjct: 480  MDEVDGMSAGDRGGVADLIASIKISKVPIICICNDRYSQKLKSLMNYCLLLSFRKPTKQQ 539

Query: 1649 MAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQS 1470
            MAKRLSHIA AEG+QVNEIALEELAER NGDIRMA+NQLQYMSLSMSVIKFDDIKQRLQS
Sbjct: 540  MAKRLSHIAKAEGIQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVIKFDDIKQRLQS 599

Query: 1469 SSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGKDD 1290
            SSKDEDISPFTAVDKLFGFN GKLRMDERIDLSMSDPDLVPLLIQENYINYRP++AGKDD
Sbjct: 600  SSKDEDISPFTAVDKLFGFNAGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSAGKDD 659

Query: 1289 NGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLEQG 1110
            NGMKRM+L+ARAAESIGDGDI+NVQIRRYRQWQLSQ GSL SCI PAALLHG RE LEQG
Sbjct: 660  NGMKRMNLIARAAESIGDGDIINVQIRRYRQWQLSQFGSLTSCIIPAALLHGSREILEQG 719

Query: 1109 ERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTDPL 930
            ERN+NRFGGWLGKNSTMGKNYRLLEDLHVHLL SRES+LGR+T+RLD LT+LLKRLTDPL
Sbjct: 720  ERNFNRFGGWLGKNSTMGKNYRLLEDLHVHLLTSRESDLGRSTIRLDCLTLLLKRLTDPL 779

Query: 929  RMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYNKG 750
            R+LPKDEAVE VV+FMD YSISMED+DTI+EMSKFKGHPNPLDGIQPAVK+ALTR YNKG
Sbjct: 780  RVLPKDEAVETVVKFMDSYSISMEDYDTIVEMSKFKGHPNPLDGIQPAVKSALTRAYNKG 839

Query: 749  SSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVE 624
            SS RVVRAADL+T+   KKAPKKR+AAMLEP++ ++A EN E
Sbjct: 840  SSLRVVRAADLVTISNFKKAPKKRIAAMLEPLEGSLAEENEE 881



 Score =  114 bits (285), Expect = 4e-22
 Identities = 66/134 (49%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            ++SQDIRKWFMK+HEK +GN +              AV  +P K+ +  +      KTSK
Sbjct: 10   LKSQDIRKWFMKKHEKDSGNSSASNQAKPSTPEKSPAVAPRPGKM-KKFKNYLAEGKTSK 68

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YFA DG   KD+++VEE  AKK  +    E VS+VKPP GK T KLE DD+D+D +TPTS
Sbjct: 69   YFATDGPGVKDDVDVEEAPAKKTAK----ELVSNVKPPTGKSTLKLENDDDDDD-LTPTS 123

Query: 3050 RKG--STTPNKKLK 3015
            RK   S TPNKKL+
Sbjct: 124  RKSSVSVTPNKKLE 137


>ref|XP_010651545.1| PREDICTED: replication factor C subunit 1 [Vitis vinifera]
            gi|296083902|emb|CBI24290.3| unnamed protein product
            [Vitis vinifera]
          Length = 941

 Score = 1081 bits (2796), Expect = 0.0
 Identities = 563/747 (75%), Positives = 617/747 (82%), Gaps = 1/747 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA+DCL GLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 158  FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSK-PXXXXXXXXXXXXX 2373
            SKKTN+LLCDEDIGG KSAKAKELGT FLTEDGLFDMI ASN +K P             
Sbjct: 218  SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKAPARGEPKKSLDKVV 277

Query: 2372 VAXXXXXXXXXXXXXXXQAGDVSSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVPN 2193
            +A                   V+S  K    AA + K   +      L WTEKY+PKVPN
Sbjct: 278  LATPKKSPQKVEKKVDQV---VNSSGKRTVLAATTPKHIYQTIGHASLTWTEKYKPKVPN 334

Query: 2192 DIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAKL 2013
            DI+GNQSLVKQLH+WL HWN+QFL+T                AVLLSGTPGIGKTTSAKL
Sbjct: 335  DIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKL 394

Query: 2012 VSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTVL 1833
            VSQMLGF+AIEVNASD+RGKA+AKI+KGIGGS +NSIKELVSNEAL  +M+RS+HPKTVL
Sbjct: 395  VSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVL 454

Query: 1832 IMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTKQ 1653
            IMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPTKQ
Sbjct: 455  IMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQ 514

Query: 1652 QMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQ 1473
            QMAKRL  +ANAEGLQVNEIALEELAERVNGD+RMALNQLQYMSLSMSVIK+DD++QRL 
Sbjct: 515  QMAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQRLL 574

Query: 1472 SSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGKD 1293
            SS+KDEDISPF AVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRP  AGKD
Sbjct: 575  SSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAGKD 634

Query: 1292 DNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLEQ 1113
            DNG+KRMSLLARAAESIGDGDI+NVQIRRYRQWQLSQ GS ASCI PAALLHGQRETLEQ
Sbjct: 635  DNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRETLEQ 694

Query: 1112 GERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTDP 933
            GERN+NRFGGWLGKNSTMGKN RLLEDLHVHLLASRESN GR TLR+DYLT++LKRLTDP
Sbjct: 695  GERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKRLTDP 754

Query: 932  LRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYNK 753
            LRMLPKD+AV+KVVEFMDLYSIS EDFDTI+E+SKF+GHP+PL+GIQPAVK+ALT+ YNK
Sbjct: 755  LRMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTKAYNK 814

Query: 752  GSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXXXX 573
            GSSSR+VRAADLITLPG+KKAPKKR+AA+LEP+DD +A EN +                 
Sbjct: 815  GSSSRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEEENSSDTDDMD 874

Query: 572  XXXXEKKLQSNLESLNSKGIKVQMDLK 492
                +KKL  +L++LNSKGIKV++DLK
Sbjct: 875  TANGDKKLPVDLQNLNSKGIKVELDLK 901



 Score = 86.3 bits (212), Expect = 2e-13
 Identities = 59/138 (42%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
 Frame = -1

Query: 3398 DIRKWFMKQHEKGTGNG--NXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYF 3225
            DIRKWFMK+H+   GN                 +  T Q EK V G QE S RRKTSKYF
Sbjct: 7    DIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKYF 66

Query: 3224 AKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS-- 3051
                Q  KDE E+EE+ AK+K Q+G+ E    + PPP KK  ++ +DD+D+DFV   S  
Sbjct: 67   ----QKPKDEKEMEELPAKRKTQKGTKE---SLNPPPSKKIRRV-VDDDDDDFVLHKSDD 118

Query: 3050 RKGSTTPNKKLKSGSGKG 2997
             K        +KSG G+G
Sbjct: 119  EKVDKDTEPPIKSG-GRG 135


>ref|XP_009361448.1| PREDICTED: replication factor C subunit 1 isoform X2 [Pyrus x
            bretschneideri]
          Length = 961

 Score = 1031 bits (2665), Expect = 0.0
 Identities = 537/749 (71%), Positives = 607/749 (81%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA +CL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 176  FMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 235

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLF MIRAS  +K               
Sbjct: 236  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFGMIRASIGAKVPVQEAKKSVDDAAA 295

Query: 2369 AXXXXXXXXXXXXXXXQAGDV---SSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                 G     S+ +K L S A  ++RK + +  +   WTEKYRPKV
Sbjct: 296  ASLHSKSPKKVTLKKDCTGSSLASSASSKQLQSDASLARRKKQTTEHSTFTWTEKYRPKV 355

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HWN+QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 356  PNDIIGNQSLVKQLHDWLSHWNEQFLDTGDKKKGKNPTNSGAKKAVLLSGTPGIGKTTSA 415

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+AIEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+ S+HPKT
Sbjct: 416  KLVSQMLGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGSKHPKT 473

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPT
Sbjct: 474  VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT 533

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  +ANAEGLQVNE+ALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 534  KQQMAKRLMQVANAEGLQVNEVALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 593

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SSSKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP+AA 
Sbjct: 594  LLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSAAV 653

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM+L+ARAAESIG+GDI NVQIR+YRQWQLSQ  SL+S I PAALL GQRETL
Sbjct: 654  KDDSGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSASLSSSIIPAALLRGQRETL 713

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR T+R++YL++LLKRLT
Sbjct: 714  EQGERNFNRFGGWLGKNSTLGKNRRLLEDLHVHLLASRESSSGRETVRVEYLSLLLKRLT 773

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV++VVEFM+ YSIS +DFDTI+E+SK++GHPNPLDGI PAVKAALT+ Y
Sbjct: 774  MPLRELPKDEAVQEVVEFMNTYSISQDDFDTIVELSKYQGHPNPLDGIVPAVKAALTKAY 833

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD +T+PG+KKAPKKR+AA+LEP DD I GEN+++              
Sbjct: 834  KEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDDAI-GENIDDTLVQSEDENSSDTE 892

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG++VQ DLK
Sbjct: 893  DLGSAVGEKLQKELQSLNTKGVQVQFDLK 921



 Score =  112 bits (279), Expect = 2e-21
 Identities = 68/145 (46%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG                   +  ++P++ VQG QE SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNTK----------KPEATVSQKTEPKEPVQGGQENSGRRKTSK 50

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YF  D    KDE    EV AK+K  +   E    VKP P KK HK++ DD+D+DFV+P S
Sbjct: 51   YFPTD--KPKDEKGTTEVPAKRKPHKDPDE---SVKPSPAKKAHKVD-DDDDDDFVSPNS 104

Query: 3050 RKGS--TTPNKKLKSGSGKGVAQKM 2982
            +K S   TP+KKLKS SG G+ QK+
Sbjct: 105  KKKSVDATPSKKLKSTSGTGIPQKV 129


>ref|XP_010031591.1| PREDICTED: replication factor C subunit 1 [Eucalyptus grandis]
            gi|629084596|gb|KCW50953.1| hypothetical protein
            EUGRSUZ_J00591 [Eucalyptus grandis]
          Length = 966

 Score = 1029 bits (2660), Expect = 0.0
 Identities = 538/747 (72%), Positives = 604/747 (80%), Gaps = 1/747 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKG+KEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 187  FMNFGERKDPPHKGQKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 246

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKSAKAKELGT FLTEDGLFD+IR+S  +K               
Sbjct: 247  SKKTNYLLCDEDIEGRKSAKAKELGTTFLTEDGLFDLIRSSINTKTPVQEKSSRTEKAVP 306

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVPND 2190
            +                 G ++SD++    AA+   + ++PS+   L WTEKYRPKVPND
Sbjct: 307  SLTKKTPPKIDPKSVSPQG-LASDSR----AALKKHQITKPSS---LTWTEKYRPKVPND 358

Query: 2189 IVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAKLV 2010
            I+GNQSLV QLH+WL HWN+QFL+T                AVLLSG PGIGKTTSAK+V
Sbjct: 359  IIGNQSLVTQLHNWLAHWNEQFLDTGKKSKGKKQTDPSAKKAVLLSGPPGIGKTTSAKVV 418

Query: 2009 SQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTVLI 1830
             +MLGF+A+EVNASDSRGKAD+KI KGIGGS +NSIKELVSNE+LS+NM+ S+HPK+VLI
Sbjct: 419  CKMLGFQAVEVNASDSRGKADSKISKGIGGSNANSIKELVSNESLSVNMDWSKHPKSVLI 478

Query: 1829 MDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTKQQ 1650
            MDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLL+FRKPTKQQ
Sbjct: 479  MDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 538

Query: 1649 MAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQS 1470
            MAKRL HIA AEGLQV EIALEELAERVNGDIR+ALNQLQYMSLSMS I +DD+KQRL S
Sbjct: 539  MAKRLMHIAQAEGLQVKEIALEELAERVNGDIRLALNQLQYMSLSMSAINYDDVKQRLLS 598

Query: 1469 SSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGKDD 1290
             +KDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENY+NYRP A GKDD
Sbjct: 599  GAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYMNYRPLAGGKDD 658

Query: 1289 NGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLEQG 1110
            NG+KRMSL+ARAAESI DGDI+NVQIRRYRQWQLSQ   LASCI PAAL+HGQRETLEQG
Sbjct: 659  NGIKRMSLIARAAESIADGDIINVQIRRYRQWQLSQASCLASCIIPAALMHGQRETLEQG 718

Query: 1109 ERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTDPL 930
            ERN+NRFGGWLGKNSTMGKN+RLL+DLH H+LASRESN GR +LR+DYL++LLKRLTDPL
Sbjct: 719  ERNFNRFGGWLGKNSTMGKNFRLLDDLHDHILASRESNSGRESLRVDYLSLLLKRLTDPL 778

Query: 929  RMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYNKG 750
            R LPKDEAV +VVEFM+ YSIS EDFDT++E+SK KGHPNPLDGI PAVK+ALTR+YN+ 
Sbjct: 779  RKLPKDEAVAEVVEFMNSYSISQEDFDTMVELSKSKGHPNPLDGIPPAVKSALTRSYNES 838

Query: 749  SSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVEN-XXXXXXXXXXXXXXXX 573
            S SR+VRAADL+TLPG+KKAPKKR+AA+LEP DD +  +N +                  
Sbjct: 839  SRSRMVRAADLVTLPGVKKAPKKRIAAILEPSDDGLGEQNGDALAESEEENSSETEDQED 898

Query: 572  XXXXEKKLQSNLESLNSKGIKVQMDLK 492
                EKKLQ +LE LNSK IKV++DLK
Sbjct: 899  AANGEKKLQLDLEGLNSKAIKVELDLK 925



 Score =  131 bits (330), Expect = 2e-27
 Identities = 76/143 (53%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
 Frame = -1

Query: 3398 DIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYFAK 3219
            DIRKWFMK H+KG GN                A  SQP+K V  VQE S RRKTSKYF  
Sbjct: 3    DIRKWFMKSHDKGNGNAKLGKPGSSDSGKTPPA-KSQPDKPVHPVQENSARRKTSKYFPA 61

Query: 3218 DGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLE-MDDEDEDFVTPTSRKG 3042
            + Q  KDE+E EEVS K+K Q+ +      +KPPP KK H +E  DD+D+DFV PT  K 
Sbjct: 62   EKQKPKDEIESEEVSTKRKPQKDTE---GSLKPPPRKKMHTVEDDDDDDDDFVLPTPNKP 118

Query: 3041 S-TTPNKKLKSGSGKGVAQKMVD 2976
            S  TP+KKLKSGSG+GV +K VD
Sbjct: 119  SDVTPSKKLKSGSGRGVPKKPVD 141


>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
            gi|508727448|gb|EOY19345.1| Replication factor C subunit
            1 [Theobroma cacao]
          Length = 1012

 Score = 1028 bits (2658), Expect = 0.0
 Identities = 534/746 (71%), Positives = 600/746 (80%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGGR+T +V
Sbjct: 173  FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITTAV 232

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELG  FLTEDGLFDMIRASN  K               
Sbjct: 233  SKKTNYLLCDEDIEGRKSSKAKELGIPFLTEDGLFDMIRASNCGK-AHSKEESKKSAESF 291

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVPND 2190
            A                +       K L ++  S+K++ +P   + L WTEKYRPKVPN+
Sbjct: 292  AASLPKKSPQKMEVKSNSSSAKISGKSLTTSVSSTKQRGQPIQHSSLTWTEKYRPKVPNE 351

Query: 2189 IVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAKLV 2010
            + GNQSLV QLH+WL HWN+QFL T                AVLLSGTPGIGKTTSAKLV
Sbjct: 352  MTGNQSLVNQLHNWLAHWNEQFLGTGSKGKGKKQNDPGAKKAVLLSGTPGIGKTTSAKLV 411

Query: 2009 SQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTVLI 1830
            SQMLGF+ IEVNASDSRGKADAKI KGIGGS +NSIKELVSNEALS+NM+RS+H KTVLI
Sbjct: 412  SQMLGFQTIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSVNMDRSKHVKTVLI 471

Query: 1829 MDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTKQQ 1650
            MDEVDGMSAGDRGG+ADL              CNDRYSQKLKSLVNYCLLLSFRKPTKQQ
Sbjct: 472  MDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 531

Query: 1649 MAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQS 1470
            MAKRL  +ANAEGLQVNEIAL+ELAERVNGD+RMALNQLQYMSLSMSVIK+DDI+QRL S
Sbjct: 532  MAKRLMQVANAEGLQVNEIALQELAERVNGDMRMALNQLQYMSLSMSVIKYDDIRQRLLS 591

Query: 1469 SSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGKDD 1290
             SKDEDISPFTAVDKLFG  GGKLRMD+RIDLSMSDPDLVPLLIQENYINYRP++ GKDD
Sbjct: 592  GSKDEDISPFTAVDKLFGIYGGKLRMDQRIDLSMSDPDLVPLLIQENYINYRPSSIGKDD 651

Query: 1289 NGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLEQG 1110
            +GMKRM+L+A+AAESIGDGDI+NVQIRRYRQWQLSQ GSL+SCI PAALLHGQRETLEQG
Sbjct: 652  SGMKRMNLIAQAAESIGDGDIINVQIRRYRQWQLSQAGSLSSCIIPAALLHGQRETLEQG 711

Query: 1109 ERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTDPL 930
            ERN+NRFGGWLGKNSTM KNYRLLEDLHVH+LASRES+ GR TLRLDYLT+LL +LT+PL
Sbjct: 712  ERNFNRFGGWLGKNSTMSKNYRLLEDLHVHILASRESSSGRETLRLDYLTVLLTQLTNPL 771

Query: 929  RMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYNKG 750
            R  PKDEAV++VVEFM+ YSIS EDFDT++E+SKF+G  NPL+GI  AVKAALT+ YN+G
Sbjct: 772  RDKPKDEAVKQVVEFMNAYSISQEDFDTVVELSKFQGQSNPLEGIPAAVKAALTKAYNEG 831

Query: 749  SSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXXXXX 570
            S +++VRAADL+TLPG+KKAPKKR+AA+LEP DD + GE   +                 
Sbjct: 832  SKTQMVRAADLVTLPGMKKAPKKRIAAILEPSDD-VLGEENGDTLPESEEKSSDTEDLEG 890

Query: 569  XXXEKKLQSNLESLNSKGIKVQMDLK 492
                + L++ L+SLNSKGI+VQM+LK
Sbjct: 891  TTDGETLRAELQSLNSKGIEVQMELK 916



 Score =  103 bits (256), Expect = 1e-18
 Identities = 72/148 (48%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
 Frame = -1

Query: 3398 DIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYFAK 3219
            DIRKWFMK H+KG GN +              A T+     V G +E SGRRKTSKYF  
Sbjct: 3    DIRKWFMKAHDKGKGNASKPANP---------APTNTDS--VPGGRENSGRRKTSKYFPA 51

Query: 3218 DGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTSRKG- 3042
              Q  K E   EE+ AK+K Q    E  S  KPPP KK  K+ +DD   DFV P SR   
Sbjct: 52   GKQQPKGEQGTEELPAKRKVQ---NENESVEKPPPSKKPSKVGIDD---DFVLPKSRNTV 105

Query: 3041 STTPNKKLKSGSGKGVAQKMV--DEIDE 2964
              TP+KK KSGSG+GVAQK    DE DE
Sbjct: 106  DVTPSKKRKSGSGRGVAQKAEDNDESDE 133


>ref|XP_009361449.1| PREDICTED: replication factor C subunit 1 isoform X3 [Pyrus x
            bretschneideri]
          Length = 960

 Score = 1026 bits (2653), Expect = 0.0
 Identities = 537/750 (71%), Positives = 607/750 (80%), Gaps = 4/750 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA +CL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 174  FMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 233

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLF MIRAS  +K               
Sbjct: 234  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFGMIRASIGAKVPVQEAKKSVDDAAA 293

Query: 2369 AXXXXXXXXXXXXXXXQAGDV---SSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                 G     S+ +K L S A  ++RK + +  +   WTEKYRPKV
Sbjct: 294  ASLHSKSPKKVTLKKDCTGSSLASSASSKQLQSDASLARRKKQTTEHSTFTWTEKYRPKV 353

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HWN+QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 354  PNDIIGNQSLVKQLHDWLSHWNEQFLDTGDKKKGKNPTNSGAKKAVLLSGTPGIGKTTSA 413

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+AIEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+ S+HPKT
Sbjct: 414  KLVSQMLGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGSKHPKT 471

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPT
Sbjct: 472  VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT 531

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  +ANAEGLQVNE+ALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 532  KQQMAKRLMQVANAEGLQVNEVALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 591

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SSSKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP+AA 
Sbjct: 592  LLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSAAV 651

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM+L+ARAAESIG+GDI NVQIR+YRQWQLSQ  SL+S I PAALL GQRETL
Sbjct: 652  KDDSGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSASLSSSIIPAALLRGQRETL 711

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR T+R++YL++LLKRLT
Sbjct: 712  EQGERNFNRFGGWLGKNSTLGKNRRLLEDLHVHLLASRESSSGRETVRVEYLSLLLKRLT 771

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV++VVEFM+ YSIS +DFDTI+E+SK++GHPNPLDGI PAVKAALT+ Y
Sbjct: 772  MPLRELPKDEAVQEVVEFMNTYSISQDDFDTIVELSKYQGHPNPLDGIVPAVKAALTKAY 831

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVEN-XXXXXXXXXXXXX 582
             +GS +R+VRAAD +T+PG+KKAPKKR+AA+LEP DD I GEN+++              
Sbjct: 832  KEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDDAI-GENIDDTLVQSEDENSSDTE 890

Query: 581  XXXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                    +KLQ  L+SLN+KG++VQ DLK
Sbjct: 891  DLEGSAVGEKLQKELQSLNTKGVQVQFDLK 920



 Score =  110 bits (275), Expect = 6e-21
 Identities = 67/141 (47%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
 Frame = -1

Query: 3398 DIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYFAK 3219
            DIRKWFMK H+KG                   +  ++P++ VQG QE SGRRKTSKYF  
Sbjct: 3    DIRKWFMKSHDKGNTK----------KPEATVSQKTEPKEPVQGGQENSGRRKTSKYFPT 52

Query: 3218 DGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTSRKGS 3039
            D    KDE    EV AK+K  +   E    VKP P KK HK++ DD+D+DFV+P S+K S
Sbjct: 53   D--KPKDEKGTTEVPAKRKPHKDPDE---SVKPSPAKKAHKVD-DDDDDDFVSPNSKKKS 106

Query: 3038 --TTPNKKLKSGSGKGVAQKM 2982
               TP+KKLKS SG G+ QK+
Sbjct: 107  VDATPSKKLKSTSGTGIPQKV 127


>ref|XP_009361447.1| PREDICTED: replication factor C subunit 1 isoform X1 [Pyrus x
            bretschneideri]
          Length = 962

 Score = 1026 bits (2653), Expect = 0.0
 Identities = 537/750 (71%), Positives = 607/750 (80%), Gaps = 4/750 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA +CL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 176  FMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 235

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLF MIRAS  +K               
Sbjct: 236  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFGMIRASIGAKVPVQEAKKSVDDAAA 295

Query: 2369 AXXXXXXXXXXXXXXXQAGDV---SSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                 G     S+ +K L S A  ++RK + +  +   WTEKYRPKV
Sbjct: 296  ASLHSKSPKKVTLKKDCTGSSLASSASSKQLQSDASLARRKKQTTEHSTFTWTEKYRPKV 355

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HWN+QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 356  PNDIIGNQSLVKQLHDWLSHWNEQFLDTGDKKKGKNPTNSGAKKAVLLSGTPGIGKTTSA 415

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+AIEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+ S+HPKT
Sbjct: 416  KLVSQMLGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGSKHPKT 473

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPT
Sbjct: 474  VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT 533

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  +ANAEGLQVNE+ALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 534  KQQMAKRLMQVANAEGLQVNEVALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 593

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SSSKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP+AA 
Sbjct: 594  LLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSAAV 653

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM+L+ARAAESIG+GDI NVQIR+YRQWQLSQ  SL+S I PAALL GQRETL
Sbjct: 654  KDDSGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSASLSSSIIPAALLRGQRETL 713

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR T+R++YL++LLKRLT
Sbjct: 714  EQGERNFNRFGGWLGKNSTLGKNRRLLEDLHVHLLASRESSSGRETVRVEYLSLLLKRLT 773

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV++VVEFM+ YSIS +DFDTI+E+SK++GHPNPLDGI PAVKAALT+ Y
Sbjct: 774  MPLRELPKDEAVQEVVEFMNTYSISQDDFDTIVELSKYQGHPNPLDGIVPAVKAALTKAY 833

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVEN-XXXXXXXXXXXXX 582
             +GS +R+VRAAD +T+PG+KKAPKKR+AA+LEP DD I GEN+++              
Sbjct: 834  KEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDDAI-GENIDDTLVQSEDENSSDTE 892

Query: 581  XXXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                    +KLQ  L+SLN+KG++VQ DLK
Sbjct: 893  DLEGSAVGEKLQKELQSLNTKGVQVQFDLK 922



 Score =  112 bits (279), Expect = 2e-21
 Identities = 68/145 (46%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG                   +  ++P++ VQG QE SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNTK----------KPEATVSQKTEPKEPVQGGQENSGRRKTSK 50

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YF  D    KDE    EV AK+K  +   E    VKP P KK HK++ DD+D+DFV+P S
Sbjct: 51   YFPTD--KPKDEKGTTEVPAKRKPHKDPDE---SVKPSPAKKAHKVD-DDDDDDFVSPNS 104

Query: 3050 RKGS--TTPNKKLKSGSGKGVAQKM 2982
            +K S   TP+KKLKS SG G+ QK+
Sbjct: 105  KKKSVDATPSKKLKSTSGTGIPQKV 129


>ref|XP_008237210.1| PREDICTED: replication factor C subunit 1 isoform X3 [Prunus mume]
          Length = 973

 Score = 1025 bits (2651), Expect = 0.0
 Identities = 537/749 (71%), Positives = 603/749 (80%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFG+RKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 189  FMNFGDRKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 248

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS  +K               
Sbjct: 249  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIHAKVSVQEAKKSVDDAAA 308

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDT---KVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                AG   + +   K L S A  ++RK + +  +   WTEKYRPKV
Sbjct: 309  ASLPKKIPNKVASKKDCAGSSMASSVSHKQLESDASHARRKKQTTEHSASTWTEKYRPKV 368

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HW++QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 369  PNDIIGNQSLVKQLHDWLAHWHEQFLDTGNKKKGKNPTNSGAKKAVLLSGTPGIGKTTSA 428

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+ IEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+  +HPKT
Sbjct: 429  KLVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGLKHPKT 486

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPT
Sbjct: 487  VLIMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRKPT 546

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  IANAEGL+VNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 547  KQQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 606

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SS+KDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A 
Sbjct: 607  LLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAV 666

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM+L+ARAAESIG+GDI NVQIR+YRQWQLSQ   L+S IFPAALL GQRETL
Sbjct: 667  KDDSGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETL 726

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL++LLKRLT
Sbjct: 727  EQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLT 786

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV KVV+FM+ YSIS +DFDTI+E+SKF+GHPNPLDGIQPAVKAALT+ Y
Sbjct: 787  VPLRELPKDEAVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAY 846

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD ITLPG+KKAPKKR+AA+LEP  D + GEN ++              
Sbjct: 847  KEGSKTRMVRAADFITLPGMKKAPKKRIAAILEPSVD-VIGENNDDTLVESEEENSSDTE 905

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG+ VQ DLK
Sbjct: 906  DLGSAAGEKLQQELQSLNTKGVHVQFDLK 934



 Score =  107 bits (266), Expect = 7e-20
 Identities = 70/151 (46%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG G                +    +P++ VQG QE SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNGK-----KPAPTTSQTPSTAKEEPKEPVQGGQENSGRRKTSK 55

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YF  D   A+ E    EV AK+K  +   E    VKP P KK HK+   D+D+DFV P  
Sbjct: 56   YFTTDKPKAEKE---TEVPAKRKTHKEPDE---SVKPSPAKKVHKVV--DDDDDFVLPHL 107

Query: 3050 RKGS--TTPNKKLKSGSGKGVAQKMVDEIDE 2964
            +K S   TP+KKLKS SG GV QK+   IDE
Sbjct: 108  KKNSVDATPSKKLKSASGVGVPQKLT-AIDE 137


>ref|XP_008237211.1| PREDICTED: replication factor C subunit 1 isoform X4 [Prunus mume]
          Length = 964

 Score = 1024 bits (2648), Expect = 0.0
 Identities = 536/749 (71%), Positives = 600/749 (80%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFG+RKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 179  FMNFGDRKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 238

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS  +K               
Sbjct: 239  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIHAKVSVQEAKKSVDDAAA 298

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDT---KVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                AG   + +   K L S A  ++RK + +  +   WTEKYRPKV
Sbjct: 299  ASLPKKIPNKVASKKDCAGSSMASSVSHKQLESDASHARRKKQTTEHSASTWTEKYRPKV 358

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HW++QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 359  PNDIIGNQSLVKQLHDWLAHWHEQFLDTGNKKKGKNPTNSGAKKAVLLSGTPGIGKTTSA 418

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+ IEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+  +HPKT
Sbjct: 419  KLVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGLKHPKT 476

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPT
Sbjct: 477  VLIMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRKPT 536

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  IANAEGL+VNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 537  KQQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 596

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SS+KDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A 
Sbjct: 597  LLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAV 656

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM+L+ARAAESIG+GDI NVQIR+YRQWQLSQ   L+S IFPAALL GQRETL
Sbjct: 657  KDDSGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETL 716

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL++LLKRLT
Sbjct: 717  EQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLT 776

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV KVV+FM+ YSIS +DFDTI+E+SKF+GHPNPLDGIQPAVKAALT+ Y
Sbjct: 777  VPLRELPKDEAVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAY 836

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD ITLPG+KKAPKKR+AA+LEP  D I   N +               
Sbjct: 837  KEGSKTRMVRAADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTED 896

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG+ VQ DLK
Sbjct: 897  LEGSAAGEKLQQELQSLNTKGVHVQFDLK 925



 Score =  107 bits (266), Expect = 7e-20
 Identities = 70/151 (46%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG G                +    +P++ VQG QE SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNGK-----KPAPTTSQTPSTAKEEPKEPVQGGQENSGRRKTSK 55

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YF  D   A+ E    EV AK+K  +   E    VKP P KK HK+   D+D+DFV P  
Sbjct: 56   YFTTDKPKAEKE---TEVPAKRKTHKEPDE---SVKPSPAKKVHKVV--DDDDDFVLPHL 107

Query: 3050 RKGS--TTPNKKLKSGSGKGVAQKMVDEIDE 2964
            +K S   TP+KKLKS SG GV QK+   IDE
Sbjct: 108  KKNSVDATPSKKLKSASGVGVPQKLT-AIDE 137


>ref|XP_008237208.1| PREDICTED: replication factor C subunit 1 isoform X1 [Prunus mume]
          Length = 974

 Score = 1024 bits (2648), Expect = 0.0
 Identities = 536/749 (71%), Positives = 600/749 (80%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFG+RKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 189  FMNFGDRKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 248

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS  +K               
Sbjct: 249  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIHAKVSVQEAKKSVDDAAA 308

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDT---KVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                AG   + +   K L S A  ++RK + +  +   WTEKYRPKV
Sbjct: 309  ASLPKKIPNKVASKKDCAGSSMASSVSHKQLESDASHARRKKQTTEHSASTWTEKYRPKV 368

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HW++QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 369  PNDIIGNQSLVKQLHDWLAHWHEQFLDTGNKKKGKNPTNSGAKKAVLLSGTPGIGKTTSA 428

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+ IEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+  +HPKT
Sbjct: 429  KLVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGLKHPKT 486

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPT
Sbjct: 487  VLIMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRKPT 546

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  IANAEGL+VNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 547  KQQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 606

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SS+KDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A 
Sbjct: 607  LLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAV 666

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM+L+ARAAESIG+GDI NVQIR+YRQWQLSQ   L+S IFPAALL GQRETL
Sbjct: 667  KDDSGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETL 726

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL++LLKRLT
Sbjct: 727  EQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLT 786

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV KVV+FM+ YSIS +DFDTI+E+SKF+GHPNPLDGIQPAVKAALT+ Y
Sbjct: 787  VPLRELPKDEAVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAY 846

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD ITLPG+KKAPKKR+AA+LEP  D I   N +               
Sbjct: 847  KEGSKTRMVRAADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTED 906

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG+ VQ DLK
Sbjct: 907  LEGSAAGEKLQQELQSLNTKGVHVQFDLK 935



 Score =  107 bits (266), Expect = 7e-20
 Identities = 70/151 (46%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG G                +    +P++ VQG QE SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNGK-----KPAPTTSQTPSTAKEEPKEPVQGGQENSGRRKTSK 55

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YF  D   A+ E    EV AK+K  +   E    VKP P KK HK+   D+D+DFV P  
Sbjct: 56   YFTTDKPKAEKE---TEVPAKRKTHKEPDE---SVKPSPAKKVHKVV--DDDDDFVLPHL 107

Query: 3050 RKGS--TTPNKKLKSGSGKGVAQKMVDEIDE 2964
            +K S   TP+KKLKS SG GV QK+   IDE
Sbjct: 108  KKNSVDATPSKKLKSASGVGVPQKLT-AIDE 137


>ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
            gi|462394403|gb|EMJ00202.1| hypothetical protein
            PRUPE_ppa000922mg [Prunus persica]
          Length = 961

 Score = 1024 bits (2647), Expect = 0.0
 Identities = 536/747 (71%), Positives = 601/747 (80%), Gaps = 1/747 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFG+RKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAE+LIKRHGGR+TGSV
Sbjct: 180  FMNFGDRKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEELIKRHGGRITGSV 239

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSK-PXXXXXXXXXXXXX 2373
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS ++K P             
Sbjct: 240  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIRAKVPVQEAKKSVDDAAA 299

Query: 2372 VAXXXXXXXXXXXXXXXQAGDVSSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVPN 2193
                              A  VS   K L S A  ++RK +P+  +   WTEKYRPKVPN
Sbjct: 300  APLPKKSPNKVASKSISLASSVSH--KQLESDASHARRKKQPTEHSASTWTEKYRPKVPN 357

Query: 2192 DIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAKL 2013
            DI+GNQSLVKQLHDWLVHW++QFL+T                AVLLSGTPGIGKTTSAKL
Sbjct: 358  DIIGNQSLVKQLHDWLVHWHEQFLDTGNKKKGKNPTNSSAKKAVLLSGTPGIGKTTSAKL 417

Query: 2012 VSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTVL 1833
            VSQMLGF+ IEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+  +HPKTVL
Sbjct: 418  VSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGLKHPKTVL 475

Query: 1832 IMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTKQ 1653
            IMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPTKQ
Sbjct: 476  IMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRKPTKQ 535

Query: 1652 QMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQ 1473
            QMAKRL  IANAEGL+VNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QRL 
Sbjct: 536  QMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLL 595

Query: 1472 SSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGKD 1293
            SS+KDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A KD
Sbjct: 596  SSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAVKD 655

Query: 1292 DNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLEQ 1113
            D+G+KRM+L+A AAESIG+GDI NVQIR+YRQWQLSQ   L+S IFPAALL GQRETLEQ
Sbjct: 656  DSGIKRMNLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLEQ 715

Query: 1112 GERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTDP 933
            GERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL++LLKRLT P
Sbjct: 716  GERNFNRFGGWLGKNSTLGKNSRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTVP 775

Query: 932  LRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYNK 753
            LR LPKDEAV KVV+FM+ YSIS +DFDTI+E+SKF+GHPNPLDGIQPAVKAALT+ Y +
Sbjct: 776  LRELPKDEAVHKVVDFMNTYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKE 835

Query: 752  GSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXXXX 573
            GS +R+VRAAD +TLPG+KKAPKKR+AA+LEP  D I   N +                 
Sbjct: 836  GSKTRMVRAADFVTLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDLE 895

Query: 572  XXXXEKKLQSNLESLNSKGIKVQMDLK 492
                 +KLQ  L+SLN+KG+ VQ DLK
Sbjct: 896  GSAAGEKLQQELQSLNTKGVHVQFDLK 922



 Score =  105 bits (261), Expect = 3e-19
 Identities = 70/147 (47%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
 Frame = -1

Query: 3398 DIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYFAK 3219
            DIRKWFMK H+KG G                   TSQ    V G QE  GRRKTSKYF  
Sbjct: 4    DIRKWFMKSHDKGNGK-------------KPAPTTSQTPSTVHGGQENPGRRKTSKYFTT 50

Query: 3218 DGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTSRKGS 3039
            D   A+ E EV    AK+K  +   E    VKP P KK HK+   D+D+DFV P S+K S
Sbjct: 51   DKPKAEKETEVP---AKRKTHKEPDE---SVKPSPAKKVHKVV--DDDDDFVLPHSKKNS 102

Query: 3038 T--TPNKKLKSGSGKGVAQKMVDEIDE 2964
               TP+KKLKS SG GV QK+   IDE
Sbjct: 103  VDATPSKKLKSASGVGVPQKLT-AIDE 128


>ref|XP_008237209.1| PREDICTED: replication factor C subunit 1 isoform X2 [Prunus mume]
          Length = 973

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 535/748 (71%), Positives = 599/748 (80%), Gaps = 2/748 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFG+RKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 189  FMNFGDRKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 248

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS  +K               
Sbjct: 249  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIHAKVSVQEAKKSVDDAAA 308

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDT--KVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVP 2196
            A                   ++S    K L S A  ++RK + +  +   WTEKYRPKVP
Sbjct: 309  ASLPKKIPNKVASKNCAGSSMASSVSHKQLESDASHARRKKQTTEHSASTWTEKYRPKVP 368

Query: 2195 NDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAK 2016
            NDI+GNQSLVKQLHDWL HW++QFL+T                AVLLSGTPGIGKTTSAK
Sbjct: 369  NDIIGNQSLVKQLHDWLAHWHEQFLDTGNKKKGKNPTNSGAKKAVLLSGTPGIGKTTSAK 428

Query: 2015 LVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTV 1836
            LVSQMLGF+ IEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ALS  M+  +HPKTV
Sbjct: 429  LVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALS--MDGLKHPKTV 486

Query: 1835 LIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTK 1656
            LIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPTK
Sbjct: 487  LIMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRKPTK 546

Query: 1655 QQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRL 1476
            QQMAKRL  IANAEGL+VNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QRL
Sbjct: 547  QQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRL 606

Query: 1475 QSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGK 1296
             SS+KDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A K
Sbjct: 607  LSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAVK 666

Query: 1295 DDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLE 1116
            DD+G+KRM+L+ARAAESIG+GDI NVQIR+YRQWQLSQ   L+S IFPAALL GQRETLE
Sbjct: 667  DDSGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLE 726

Query: 1115 QGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTD 936
            QGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL++LLKRLT 
Sbjct: 727  QGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTV 786

Query: 935  PLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYN 756
            PLR LPKDEAV KVV+FM+ YSIS +DFDTI+E+SKF+GHPNPLDGIQPAVKAALT+ Y 
Sbjct: 787  PLRELPKDEAVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYK 846

Query: 755  KGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXXX 576
            +GS +R+VRAAD ITLPG+KKAPKKR+AA+LEP  D I   N +                
Sbjct: 847  EGSKTRMVRAADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDL 906

Query: 575  XXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                  +KLQ  L+SLN+KG+ VQ DLK
Sbjct: 907  EGSAAGEKLQQELQSLNTKGVHVQFDLK 934



 Score =  107 bits (266), Expect = 7e-20
 Identities = 70/151 (46%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG G                +    +P++ VQG QE SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNGK-----KPAPTTSQTPSTAKEEPKEPVQGGQENSGRRKTSK 55

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YF  D   A+ E    EV AK+K  +   E    VKP P KK HK+   D+D+DFV P  
Sbjct: 56   YFTTDKPKAEKE---TEVPAKRKTHKEPDE---SVKPSPAKKVHKVV--DDDDDFVLPHL 107

Query: 3050 RKGS--TTPNKKLKSGSGKGVAQKMVDEIDE 2964
            +K S   TP+KKLKS SG GV QK+   IDE
Sbjct: 108  KKNSVDATPSKKLKSASGVGVPQKLT-AIDE 137


>ref|XP_008375618.1| PREDICTED: replication factor C subunit 1 [Malus domestica]
          Length = 959

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 531/749 (70%), Positives = 601/749 (80%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMN+GERKDPPHKGEKEVPEGA +CL GLTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 174  FMNYGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 233

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLF  IRAS  +K               
Sbjct: 234  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFGKIRASIGAKVPVQEAKKSVDDAAA 293

Query: 2369 AXXXXXXXXXXXXXXXQAGDV---SSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                 G +   S+ +K L S A  ++RK + +  +   WTEKYRPKV
Sbjct: 294  ASLPSKSPKKVTLKKDCTGSLLASSASSKQLQSDASLARRKKQTTEHSTFTWTEKYRPKV 353

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDIVGNQSLVKQLHDWL HWN+QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 354  PNDIVGNQSLVKQLHDWLSHWNEQFLDTGDKKKGKNPINSGAKKAVLLSGTPGIGKTTSA 413

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+AIEVNASDSRGKAD+KIEKGIGGS +NSIKELVSN+ LS  M+ S+HPKT
Sbjct: 414  KLVSQMLGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKGLS--MDGSKHPKT 471

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSFRKPT
Sbjct: 472  VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT 531

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  +ANAEGLQVNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 532  KQQMAKRLMQVANAEGLQVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 591

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SSSKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENY+NYRP+AA 
Sbjct: 592  LLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYVNYRPSAAV 651

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KR++L+ARAAESIG+GDI NVQIR+YRQWQLSQ   L+S I PAALL GQRETL
Sbjct: 652  KDDSGIKRLNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRGQRETL 711

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR T+R++YL++LLKRLT
Sbjct: 712  EQGERNFNRFGGWLGKNSTLGKNRRLLEDLHVHLLASRESSSGRETVRVEYLSLLLKRLT 771

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV++VVEFM+ YSIS +DFDTI+E+SK++GHPNPLDGI PAVKAALT+ Y
Sbjct: 772  VPLRELPKDEAVQEVVEFMNTYSISQDDFDTIVELSKYQGHPNPLDGIVPAVKAALTKAY 831

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD +T+PG+KKAPKKR+AA+LEP DD I   N +               
Sbjct: 832  KEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDDAIGENNDDTLVQSEDENSSDTED 891

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG++VQ DLK
Sbjct: 892  LEDSAVGEKLQKELQSLNTKGVQVQFDLK 920



 Score =  107 bits (266), Expect = 7e-20
 Identities = 65/142 (45%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
 Frame = -1

Query: 3398 DIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYFAK 3219
            DIRKWFMK H+KG                   +  ++P++ VQG QE SGRRKTSKYF  
Sbjct: 3    DIRKWFMKSHDKGNTK----------KPEATVSQKTEPKEPVQGGQENSGRRKTSKYFPT 52

Query: 3218 DGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTSRKGS 3039
            D    KDE    EV AK+K  +   E    +KP P KK HK+++DD D+DFV+  S+K S
Sbjct: 53   D--KPKDEKGTTEVPAKRKPHKDPDE---SIKPSPAKKAHKVDVDD-DDDFVSSNSKKKS 106

Query: 3038 --TTPNKKLKSGSGKGVAQKMV 2979
               TP+KKLKS SG G+ QK++
Sbjct: 107  VYATPSKKLKSTSGTGIPQKVM 128


>ref|XP_008790175.1| PREDICTED: replication factor C subunit 1 isoform X1 [Phoenix
            dactylifera]
          Length = 986

 Score = 1018 bits (2632), Expect = 0.0
 Identities = 528/752 (70%), Positives = 597/752 (79%), Gaps = 6/752 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA +CL GLTFVISGTLDSLEREEAEDLIKRHGGRVTGS+
Sbjct: 196  FMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 255

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKT++LL DEDIGGRKS+KAKELG  FLTEDGLFDMIR S  +K              V
Sbjct: 256  SKKTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAPVQEEQKKKTLEKV 315

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSD--TKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVP 2196
                            Q G V      K++ S+    K K + + ++ L WT KYRPKVP
Sbjct: 316  EKSPIKSTPLKVEAKDQVGSVGRKDAAKIVKSSTSPDKPKIQSADRSSLTWTVKYRPKVP 375

Query: 2195 NDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAK 2016
            +DI+GNQSLVKQLHDWLVHWN+QFL+T                AVLLSG+PGIGK+TSAK
Sbjct: 376  DDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADSGSKKAVLLSGSPGIGKSTSAK 435

Query: 2015 LVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTV 1836
            LVSQMLGF+AIEVNASD+RGKAD KI KG+GG+TSNSIKELVSNEALS     S+HPK+V
Sbjct: 436  LVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELVSNEALSCRKNWSKHPKSV 495

Query: 1835 LIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTK 1656
            LIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLL+FRKPTK
Sbjct: 496  LIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTK 555

Query: 1655 QQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRL 1476
            QQMAKRL  IA+AEGLQVNEIALEELA RVNGD+RMA+NQLQYMSLS SVI +DDI+QRL
Sbjct: 556  QQMAKRLKQIADAEGLQVNEIALEELANRVNGDMRMAINQLQYMSLSQSVINYDDIRQRL 615

Query: 1475 QSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGK 1296
             SSSKDEDISPFTAVDKLFGFNGGKL M+ER+DLSMSDPDL+PL+IQENYINYRP++ GK
Sbjct: 616  LSSSKDEDISPFTAVDKLFGFNGGKLHMEERVDLSMSDPDLIPLIIQENYINYRPSSIGK 675

Query: 1295 DDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLE 1116
            DDNG+KRMSL+ARAAESIGDGDIVNVQIRRYRQWQLSQ GS ASCI PAAL+HG RETLE
Sbjct: 676  DDNGVKRMSLIARAAESIGDGDIVNVQIRRYRQWQLSQAGSFASCIIPAALMHGHRETLE 735

Query: 1115 QGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTD 936
             GERNYNRFGGWLGKNSTMGKN RLLED+H+H+LAS+E+N+ R TLR+DY T+LLK+LTD
Sbjct: 736  PGERNYNRFGGWLGKNSTMGKNLRLLEDVHIHILASQEANMNRETLRVDYFTLLLKQLTD 795

Query: 935  PLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYN 756
            PLR++PK+EAV+KVVE MD YS+S EDFDTI+EMSKF+GHPNP++GIQPAVKAALT+ Y 
Sbjct: 796  PLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEMSKFRGHPNPMEGIQPAVKAALTKAYK 855

Query: 755  KGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGEN----VENXXXXXXXXXXX 588
            +GSSSRVVRAADLI LPGLKKAPKKR+AAMLEP++  +A EN     E            
Sbjct: 856  QGSSSRVVRAADLIALPGLKKAPKKRIAAMLEPVETGLAEENGDAVAEGEEEYSSDSEDT 915

Query: 587  XXXXXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                       K Q +L S   KG++V++DLK
Sbjct: 916  DDLGINADGGAKPQLDLLSNKPKGVQVELDLK 947



 Score =  110 bits (274), Expect = 8e-21
 Identities = 69/160 (43%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
 Frame = -1

Query: 3404 SQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQP-----EKLVQGVQECSGRRK 3240
            S DIRKWFMKQH+KG G  +              A + +P     +K VQG QE SGRRK
Sbjct: 2    SSDIRKWFMKQHDKGNGTASKPAAKPAM------AASEKPPAPVLDKSVQGAQENSGRRK 55

Query: 3239 TSKYFA-------KDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDD 3081
            TSKYFA          ++ KDE   E+  AK+K Q+ + +F  DVKP P KK HK    D
Sbjct: 56   TSKYFATTTATESSSKKTTKDEKVTEKSPAKRKAQKITEDFQDDVKPVPAKKFHK----D 111

Query: 3080 EDEDFVTPTSRK--GSTTPNKKLKSGSGKGVAQKMVDEID 2967
            ED+DFV    RK      P+KKL S S  G+++  VD+ D
Sbjct: 112  EDDDFVPSNDRKKAAEVKPSKKLNSRSSGGISKNSVDKND 151


>ref|XP_008790185.1| PREDICTED: replication factor C subunit 1 isoform X2 [Phoenix
            dactylifera]
          Length = 985

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 528/751 (70%), Positives = 597/751 (79%), Gaps = 5/751 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA +CL GLTFVISGTLDSLEREEAEDLIKRHGGRVTGS+
Sbjct: 196  FMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 255

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKT++LL DEDIGGRKS+KAKELG  FLTEDGLFDMIR S  +K              V
Sbjct: 256  SKKTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAPVQEEQKKKTLEKV 315

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSD--TKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVP 2196
                            Q G V      K++ S+    K K + + ++ L WT KYRPKVP
Sbjct: 316  EKSPIKSTPLKVEAKDQVGSVGRKDAAKIVKSSTSPDKPKIQSADRSSLTWTVKYRPKVP 375

Query: 2195 NDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAK 2016
            +DI+GNQSLVKQLHDWLVHWN+QFL+T                AVLLSG+PGIGK+TSAK
Sbjct: 376  DDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADSGSKKAVLLSGSPGIGKSTSAK 435

Query: 2015 LVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTV 1836
            LVSQMLGF+AIEVNASD+RGKAD KI KG+GG+TSNSIKELVSNEALS     S+HPK+V
Sbjct: 436  LVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELVSNEALSCRKNWSKHPKSV 495

Query: 1835 LIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTK 1656
            LIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLL+FRKPTK
Sbjct: 496  LIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTK 555

Query: 1655 QQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRL 1476
            QQMAKRL  IA+AEGLQVNEIALEELA RVNGD+RMA+NQLQYMSLS SVI +DDI+QRL
Sbjct: 556  QQMAKRLKQIADAEGLQVNEIALEELANRVNGDMRMAINQLQYMSLSQSVINYDDIRQRL 615

Query: 1475 QSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGK 1296
             SSSKDEDISPFTAVDKLFGFNGGKL M+ER+DLSMSDPDL+PL+IQENYINYRP++ GK
Sbjct: 616  LSSSKDEDISPFTAVDKLFGFNGGKLHMEERVDLSMSDPDLIPLIIQENYINYRPSSIGK 675

Query: 1295 DDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLE 1116
            DDNG+KRMSL+ARAAESIGDGDIVNVQIRRYRQWQLSQ GS ASCI PAAL+HG RETLE
Sbjct: 676  DDNGVKRMSLIARAAESIGDGDIVNVQIRRYRQWQLSQAGSFASCIIPAALMHGHRETLE 735

Query: 1115 QGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTD 936
             GERNYNRFGGWLGKNSTMGKN RLLED+H+H+LAS+E+N+ R TLR+DY T+LLK+LTD
Sbjct: 736  PGERNYNRFGGWLGKNSTMGKNLRLLEDVHIHILASQEANMNRETLRVDYFTLLLKQLTD 795

Query: 935  PLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYN 756
            PLR++PK+EAV+KVVE MD YS+S EDFDTI+EMSKF+GHPNP++GIQPAVKAALT+ Y 
Sbjct: 796  PLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEMSKFRGHPNPMEGIQPAVKAALTKAYK 855

Query: 755  KGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGEN---VENXXXXXXXXXXXX 585
            +GSSSRVVRAADLI LPGLKKAPKKR+AAMLEP++  +A EN   V              
Sbjct: 856  QGSSSRVVRAADLIALPGLKKAPKKRIAAMLEPVETGLAEENGDAVAEGEEEYSSDSEDT 915

Query: 584  XXXXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                      K Q +L S   KG++V++DLK
Sbjct: 916  DLGINADGGAKPQLDLLSNKPKGVQVELDLK 946



 Score =  110 bits (274), Expect = 8e-21
 Identities = 69/160 (43%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
 Frame = -1

Query: 3404 SQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQP-----EKLVQGVQECSGRRK 3240
            S DIRKWFMKQH+KG G  +              A + +P     +K VQG QE SGRRK
Sbjct: 2    SSDIRKWFMKQHDKGNGTASKPAAKPAM------AASEKPPAPVLDKSVQGAQENSGRRK 55

Query: 3239 TSKYFA-------KDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDD 3081
            TSKYFA          ++ KDE   E+  AK+K Q+ + +F  DVKP P KK HK    D
Sbjct: 56   TSKYFATTTATESSSKKTTKDEKVTEKSPAKRKAQKITEDFQDDVKPVPAKKFHK----D 111

Query: 3080 EDEDFVTPTSRK--GSTTPNKKLKSGSGKGVAQKMVDEID 2967
            ED+DFV    RK      P+KKL S S  G+++  VD+ D
Sbjct: 112  EDDDFVPSNDRKKAAEVKPSKKLNSRSSGGISKNSVDKND 151


>ref|XP_010094821.1| Replication factor C subunit 1 [Morus notabilis]
            gi|587867931|gb|EXB57307.1| Replication factor C subunit
            1 [Morus notabilis]
          Length = 1047

 Score = 1014 bits (2621), Expect = 0.0
 Identities = 523/746 (70%), Positives = 591/746 (79%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA+DCL GLTFVISGTLDSLEREEAEDLIK HGGRVTGSV
Sbjct: 263  FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKCHGGRVTGSV 322

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS KAKELGT FL+EDGLFDMIRAS+++KP              
Sbjct: 323  SKKTNYLLCDEDIEGRKSEKAKELGTPFLSEDGLFDMIRASSRAKPKQESKKSVDDADVP 382

Query: 2369 AXXXXXXXXXXXXXXXQAGDVSSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKVPND 2190
                             A      +K LA+ A   ++K + +  + L WTEKY+PKV ND
Sbjct: 383  ISKKSMQKIELKNCTGSAAPKDVASKSLAARASLDRKKIQTAEHSALTWTEKYKPKVTND 442

Query: 2189 IVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSAKLV 2010
            I+GNQSLVKQLH WL +W++QFL+                 AVLLSGTPGIGKTTSAKLV
Sbjct: 443  IIGNQSLVKQLHYWLANWHEQFLDAGSKKKGKKANDPGVKKAVLLSGTPGIGKTTSAKLV 502

Query: 2009 SQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKTVLI 1830
            SQMLGF+ IEVNASDSRGKADAKIEKGIGGS +NSIKELVSNEALS+NM+ S+HPKTVLI
Sbjct: 503  SQMLGFQMIEVNASDSRGKADAKIEKGIGGSNANSIKELVSNEALSVNMDWSKHPKTVLI 562

Query: 1829 MDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPTKQQ 1650
            MDEVDGMSAGDRGG+ADL              CNDRYSQKLKSLVNYCLLLSFRKPTKQQ
Sbjct: 563  MDEVDGMSAGDRGGIADLISSIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 622

Query: 1649 MAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQS 1470
            MAKRL  +AN+EGLQVNEIALEELAERV+GD+RMALNQL YMSLSMSVIK+DD++QRL +
Sbjct: 623  MAKRLMQVANSEGLQVNEIALEELAERVSGDMRMALNQLHYMSLSMSVIKYDDVRQRLLA 682

Query: 1469 SSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAGKDD 1290
            S+KDEDISPFTAVDKLFGFN GKLRMDER+DLSMSD DLVPLLIQENY+NYRP++ GKDD
Sbjct: 683  SAKDEDISPFTAVDKLFGFNAGKLRMDERMDLSMSDLDLVPLLIQENYVNYRPSSVGKDD 742

Query: 1289 NGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETLEQG 1110
            NG+ RMSL+ARAAESIGDGDI NVQIR+YRQWQLSQ  +L+SCI P ALLHGQR+ LEQG
Sbjct: 743  NGISRMSLIARAAESIGDGDIFNVQIRKYRQWQLSQSSALSSCIIPTALLHGQRQILEQG 802

Query: 1109 ERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLTDPL 930
            ERN+NRF GWLGKNST  KN RLLEDLHVHLLASRESN GR TLR++YLT+LLKRLT+PL
Sbjct: 803  ERNFNRFSGWLGKNSTFNKNMRLLEDLHVHLLASRESNSGRGTLRIEYLTLLLKRLTEPL 862

Query: 929  RMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTYNKG 750
            R+LPKD AV +VV+FM+ YSIS EDFDTI+E+SKFKG P+PL GI  AVKAALTR Y +G
Sbjct: 863  RVLPKDGAVREVVDFMNTYSISQEDFDTIVELSKFKGRPDPLGGIASAVKAALTRAYKEG 922

Query: 749  SSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXXXXX 570
            S SR+VR AD +TLPG+KKAPKKR+AA+LEP D+ +   N E                  
Sbjct: 923  SKSRMVRTADFVTLPGIKKAPKKRIAAILEPSDEGVGENNEEAAAEIEEENLSDTEDLED 982

Query: 569  XXXEKKLQSNLESLNSKGIKVQMDLK 492
                +KLQ  L+SLN KG++V +DLK
Sbjct: 983  SAAGEKLQKELQSLNKKGVQVHLDLK 1008



 Score =  119 bits (299), Expect = 9e-24
 Identities = 73/151 (48%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK HEKG GN                +  + PE+ VQG Q+ SGRRKTSK
Sbjct: 85   MSQSDIRKWFMKSHEKGNGNS---------ASKPAKSAQALPEEPVQGSQDNSGRRKTSK 135

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHKLEMDDEDEDFVTPTS 3051
            YF+   +  KDE E+ EV  K+K Q  S E    VKP P KK HK+   D+D+DFV P +
Sbjct: 136  YFS--AEKPKDEKEMVEVPVKRKTQTDSHEM---VKPSPAKKIHKV---DDDDDFVLPNT 187

Query: 3050 RKG--STTPNKKLKSGSGKGVAQKMVDEIDE 2964
            ++   ++TP KKLKSGSG+G  QK +D IDE
Sbjct: 188  KEKPVASTPRKKLKSGSGRGTGQKPLD-IDE 217


>ref|XP_008356392.1| PREDICTED: replication factor C subunit 1-like isoform X4 [Malus
            domestica]
          Length = 953

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 530/749 (70%), Positives = 595/749 (79%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGG +TGSV
Sbjct: 183  FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGHITGSV 242

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS  +K               
Sbjct: 243  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIGAKVPVHEAKKSVDDAAA 302

Query: 2369 AXXXXXXXXXXXXXXXQAGDV---SSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                 G     S+ +K+L S A  ++ K + +  +   WTEKYRPKV
Sbjct: 303  ASLPNKSPKKVTLKKDLTGSSLASSASSKLLQSDASLARHKKQTTGHSTFTWTEKYRPKV 362

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HWN+QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 363  PNDIIGNQSLVKQLHDWLAHWNEQFLDTGNKKKGKNPTNSGAKRAVLLSGTPGIGKTTSA 422

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+AIEVNASDSR K+D+KIEKGIGGS +NSIKELVSN+ALS   + S+HPKT
Sbjct: 423  KLVSQMLGFQAIEVNASDSRCKSDSKIEKGIGGSNANSIKELVSNKALS--KDGSKHPKT 480

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSF KPT
Sbjct: 481  VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFHKPT 540

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  IA+AEGLQVNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 541  KQQMAKRLMQIASAEGLQVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 600

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SSSKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A 
Sbjct: 601  LLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAV 660

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM L+A AAESIG+GDI NVQIR+YRQWQLSQ   L+S I PAALL GQRETL
Sbjct: 661  KDDSGIKRMDLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRGQRETL 720

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL +LLKRLT
Sbjct: 721  EQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLFLLLKRLT 780

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV++VVEFM+ YSIS +DFDTI+E+SK+KGHPNPLDGI PAVKAALT+ Y
Sbjct: 781  VPLRELPKDEAVQEVVEFMNAYSISQDDFDTIVELSKYKGHPNPLDGILPAVKAALTKAY 840

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD +T+PG+KKAPKKR+AA+LEP D  I   N +               
Sbjct: 841  KEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDVVIGENNDDTLVQSEDENSSDTED 900

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG++VQ DLK
Sbjct: 901  LEGTAAGEKLQKELQSLNTKGVQVQFDLK 929



 Score =  105 bits (262), Expect = 2e-19
 Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG                  +   ++P++  +G Q+ SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNSQ-----KPVVTTSQTPSTAKTEPKESARGDQDNSGRRKTSK 55

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHK-LEMDDEDEDFVTPT 3054
            YF  D  +  D+ E  +V AK+K  +   E    +KP P KK HK ++ DD+D+DFV+P 
Sbjct: 56   YFPPDKPT--DDKETSKVPAKRKPHKDPDE---SIKPSPAKKAHKVIDDDDDDDDFVSPN 110

Query: 3053 SRKGS--TTPNKKLKSGSGKGVAQKMVDEIDE 2964
             +K S  +TP+KKLKS SG G+ QK V  IDE
Sbjct: 111  LKKKSVDSTPSKKLKSTSGVGIPQK-VTTIDE 141


>ref|XP_008356391.1| PREDICTED: replication factor C subunit 1-like isoform X3 [Malus
            domestica]
          Length = 966

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 530/749 (70%), Positives = 595/749 (79%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGG +TGSV
Sbjct: 181  FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGHITGSV 240

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS  +K               
Sbjct: 241  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIGAKVPVHEAKKSVDDAAA 300

Query: 2369 AXXXXXXXXXXXXXXXQAGDV---SSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                 G     S+ +K+L S A  ++ K + +  +   WTEKYRPKV
Sbjct: 301  ASLPNKSPKKVTLKKDLTGSSLASSASSKLLQSDASLARHKKQTTGHSTFTWTEKYRPKV 360

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HWN+QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 361  PNDIIGNQSLVKQLHDWLAHWNEQFLDTGNKKKGKNPTNSGAKRAVLLSGTPGIGKTTSA 420

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+AIEVNASDSR K+D+KIEKGIGGS +NSIKELVSN+ALS   + S+HPKT
Sbjct: 421  KLVSQMLGFQAIEVNASDSRCKSDSKIEKGIGGSNANSIKELVSNKALS--KDGSKHPKT 478

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSF KPT
Sbjct: 479  VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFHKPT 538

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  IA+AEGLQVNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 539  KQQMAKRLMQIASAEGLQVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 598

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SSSKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A 
Sbjct: 599  LLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAV 658

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM L+A AAESIG+GDI NVQIR+YRQWQLSQ   L+S I PAALL GQRETL
Sbjct: 659  KDDSGIKRMDLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRGQRETL 718

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL +LLKRLT
Sbjct: 719  EQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLFLLLKRLT 778

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV++VVEFM+ YSIS +DFDTI+E+SK+KGHPNPLDGI PAVKAALT+ Y
Sbjct: 779  VPLRELPKDEAVQEVVEFMNAYSISQDDFDTIVELSKYKGHPNPLDGILPAVKAALTKAY 838

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD +T+PG+KKAPKKR+AA+LEP D  I   N +               
Sbjct: 839  KEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDVVIGENNDDTLVQSEDENSSDTED 898

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG++VQ DLK
Sbjct: 899  LEGTAAGEKLQKELQSLNTKGVQVQFDLK 927



 Score =  103 bits (258), Expect = 6e-19
 Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
 Frame = -1

Query: 3398 DIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSKYFAK 3219
            DIRKWFMK H+KG                  +   ++P++  +G Q+ SGRRKTSKYF  
Sbjct: 3    DIRKWFMKSHDKGNSQ-----KPVVTTSQTPSTAKTEPKESARGDQDNSGRRKTSKYFPP 57

Query: 3218 DGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHK-LEMDDEDEDFVTPTSRKG 3042
            D  +  D+ E  +V AK+K  +   E    +KP P KK HK ++ DD+D+DFV+P  +K 
Sbjct: 58   DKPT--DDKETSKVPAKRKPHKDPDE---SIKPSPAKKAHKVIDDDDDDDDFVSPNLKKK 112

Query: 3041 S--TTPNKKLKSGSGKGVAQKMVDEIDE 2964
            S  +TP+KKLKS SG G+ QK V  IDE
Sbjct: 113  SVDSTPSKKLKSTSGVGIPQK-VTTIDE 139


>ref|XP_008356388.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Malus
            domestica] gi|658041562|ref|XP_008356389.1| PREDICTED:
            replication factor C subunit 1-like isoform X1 [Malus
            domestica]
          Length = 968

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 530/749 (70%), Positives = 595/749 (79%), Gaps = 3/749 (0%)
 Frame = -1

Query: 2729 FMNFGERKDPPHKGEKEVPEGAADCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 2550
            FMNFGERKDPPHKGEKEVPEGA DCL GLTFVISGTLDSLEREEAEDLIKRHGG +TGSV
Sbjct: 183  FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGHITGSV 242

Query: 2549 SKKTNYLLCDEDIGGRKSAKAKELGTGFLTEDGLFDMIRASNKSKPXXXXXXXXXXXXXV 2370
            SKKTNYLLCDEDI GRKS+KAKELGT FLTEDGLFDMIRAS  +K               
Sbjct: 243  SKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIGAKVPVHEAKKSVDDAAA 302

Query: 2369 AXXXXXXXXXXXXXXXQAGDV---SSDTKVLASAAVSSKRKSEPSAQNLLPWTEKYRPKV 2199
            A                 G     S+ +K+L S A  ++ K + +  +   WTEKYRPKV
Sbjct: 303  ASLPNKSPKKVTLKKDLTGSSLASSASSKLLQSDASLARHKKQTTGHSTFTWTEKYRPKV 362

Query: 2198 PNDIVGNQSLVKQLHDWLVHWNDQFLNTXXXXXXXXXXXXXXXXAVLLSGTPGIGKTTSA 2019
            PNDI+GNQSLVKQLHDWL HWN+QFL+T                AVLLSGTPGIGKTTSA
Sbjct: 363  PNDIIGNQSLVKQLHDWLAHWNEQFLDTGNKKKGKNPTNSGAKRAVLLSGTPGIGKTTSA 422

Query: 2018 KLVSQMLGFRAIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQHPKT 1839
            KLVSQMLGF+AIEVNASDSR K+D+KIEKGIGGS +NSIKELVSN+ALS   + S+HPKT
Sbjct: 423  KLVSQMLGFQAIEVNASDSRCKSDSKIEKGIGGSNANSIKELVSNKALS--KDGSKHPKT 480

Query: 1838 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSFRKPT 1659
            VLIMDEVDGMSAGDRGGVADL              CNDRYSQKLKSLVNYCLLLSF KPT
Sbjct: 481  VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFHKPT 540

Query: 1658 KQQMAKRLSHIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQR 1479
            KQQMAKRL  IA+AEGLQVNEIALEELAE+VNGD+RMA+NQLQYMSLSMSVIK+DD++QR
Sbjct: 541  KQQMAKRLMQIASAEGLQVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQR 600

Query: 1478 LQSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPNAAG 1299
            L SSSKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSDPDLVPLLIQENYINYRP++A 
Sbjct: 601  LLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAV 660

Query: 1298 KDDNGMKRMSLLARAAESIGDGDIVNVQIRRYRQWQLSQIGSLASCIFPAALLHGQRETL 1119
            KDD+G+KRM L+A AAESIG+GDI NVQIR+YRQWQLSQ   L+S I PAALL GQRETL
Sbjct: 661  KDDSGIKRMDLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRGQRETL 720

Query: 1118 EQGERNYNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRATLRLDYLTILLKRLT 939
            EQGERN+NRFGGWLGKNST+GKN RLLEDLHVHLLASRES+ GR TLR++YL +LLKRLT
Sbjct: 721  EQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLFLLLKRLT 780

Query: 938  DPLRMLPKDEAVEKVVEFMDLYSISMEDFDTIMEMSKFKGHPNPLDGIQPAVKAALTRTY 759
             PLR LPKDEAV++VVEFM+ YSIS +DFDTI+E+SK+KGHPNPLDGI PAVKAALT+ Y
Sbjct: 781  VPLRELPKDEAVQEVVEFMNAYSISQDDFDTIVELSKYKGHPNPLDGILPAVKAALTKAY 840

Query: 758  NKGSSSRVVRAADLITLPGLKKAPKKRVAAMLEPIDDNIAGENVENXXXXXXXXXXXXXX 579
             +GS +R+VRAAD +T+PG+KKAPKKR+AA+LEP D  I   N +               
Sbjct: 841  KEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDVVIGENNDDTLVQSEDENSSDTED 900

Query: 578  XXXXXXEKKLQSNLESLNSKGIKVQMDLK 492
                   +KLQ  L+SLN+KG++VQ DLK
Sbjct: 901  LEGTAAGEKLQKELQSLNTKGVQVQFDLK 929



 Score =  105 bits (262), Expect = 2e-19
 Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
 Frame = -1

Query: 3410 MQSQDIRKWFMKQHEKGTGNGNXXXXXXXXXXXXXTAVTSQPEKLVQGVQECSGRRKTSK 3231
            M   DIRKWFMK H+KG                  +   ++P++  +G Q+ SGRRKTSK
Sbjct: 1    MSQADIRKWFMKSHDKGNSQ-----KPVVTTSQTPSTAKTEPKESARGDQDNSGRRKTSK 55

Query: 3230 YFAKDGQSAKDEMEVEEVSAKKKGQRGSTEFVSDVKPPPGKKTHK-LEMDDEDEDFVTPT 3054
            YF  D  +  D+ E  +V AK+K  +   E    +KP P KK HK ++ DD+D+DFV+P 
Sbjct: 56   YFPPDKPT--DDKETSKVPAKRKPHKDPDE---SIKPSPAKKAHKVIDDDDDDDDFVSPN 110

Query: 3053 SRKGS--TTPNKKLKSGSGKGVAQKMVDEIDE 2964
             +K S  +TP+KKLKS SG G+ QK V  IDE
Sbjct: 111  LKKKSVDSTPSKKLKSTSGVGIPQK-VTTIDE 141