BLASTX nr result
ID: Rehmannia27_contig00013131
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00013131
(725 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD,... 124 1e-39
ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD,... 119 9e-28
ref|XP_012849779.1| PREDICTED: RNA polymerase sigma factor sigD,... 119 2e-27
emb|CDP17818.1| unnamed protein product [Coffea canephora] 91 2e-17
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,... 87 2e-16
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 82 5e-15
ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD,... 82 1e-14
ref|XP_010324734.1| PREDICTED: RNA polymerase sigma factor sigD,... 81 2e-14
ref|XP_010324732.1| PREDICTED: RNA polymerase sigma factor sigD,... 81 2e-14
ref|XP_015063095.1| PREDICTED: RNA polymerase sigma factor sigD,... 81 4e-14
ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD,... 81 4e-14
ref|XP_009612911.1| PREDICTED: RNA polymerase sigma factor sigD,... 78 4e-13
ref|XP_006345495.2| PREDICTED: RNA polymerase sigma factor sigD,... 77 6e-13
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu... 75 2e-12
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu... 75 2e-12
ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Popu... 75 3e-12
ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD,... 75 4e-12
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu... 75 5e-12
ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD,... 75 5e-12
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 75 5e-12
>ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Sesamum
indicum]
Length = 446
Score = 124 bits (311), Expect(2) = 1e-39
Identities = 69/106 (65%), Positives = 78/106 (73%), Gaps = 15/106 (14%)
Frame = -1
Query: 275 EDEKFVFVDKKAGKSRFMTPKEEATFSWY-----------LKERARIEGVRTEM----GG 141
ED K VFVDKK GKSRFMT KEEA FSW +ERARI V+TE+ G
Sbjct: 122 EDGKLVFVDKKEGKSRFMTSKEEARFSWIHEDTNSLEYDLQQERARIVAVKTELLAETGR 181
Query: 140 QELSSSQWAKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
+E+SSSQWAKAAGISQ LD+ILCNGRESEE+ITS Y+RLVVS+AS
Sbjct: 182 REVSSSQWAKAAGISQRNLDRILCNGRESEERITSCYRRLVVSIAS 227
Score = 67.4 bits (163), Expect(2) = 1e-39
Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Frame = -3
Query: 600 ICSCSKHXXXXXXXXXXXXSTDSYLKVSSYASPLAYTHS--------SVQEDALVISSG- 448
ICSCSK ST S+LKVSSY + YT S +VQEDA++I S
Sbjct: 3 ICSCSKQSPALPNISFPYYSTKSFLKVSSYNTLPTYTQSPCNHTCSYTVQEDAIIIHSAC 62
Query: 447 ----ELSGAAMASARKSEKILDRNGSENDVKNKEHYWCNEV 337
++ AA A A EK+LD GSEND K + +WCNEV
Sbjct: 63 TQHLAVAAAAAAPAHDMEKLLDLKGSENDAK-RGRFWCNEV 102
>ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X2 [Erythranthe guttata]
Length = 436
Score = 119 bits (297), Expect = 9e-28
Identities = 62/97 (63%), Positives = 75/97 (77%), Gaps = 6/97 (6%)
Frame = -1
Query: 275 EDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGGQ------ELSSSQWA 114
++ KF+F DK +GKSRFM PKEEA FSW+L+ERARIE VRTE + ELSS QWA
Sbjct: 121 QNHKFLFSDKNSGKSRFMNPKEEAKFSWHLQERARIEAVRTEALAKMEEEEHELSSIQWA 180
Query: 113 KAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
AAGISQ LD+I+ NG++SE++IT SY RLVVSVAS
Sbjct: 181 NAAGISQKNLDRIIWNGKQSEKRITKSYLRLVVSVAS 217
>ref|XP_012849779.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Erythranthe guttata]
Length = 487
Score = 119 bits (297), Expect = 2e-27
Identities = 62/97 (63%), Positives = 75/97 (77%), Gaps = 6/97 (6%)
Frame = -1
Query: 275 EDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGGQ------ELSSSQWA 114
++ KF+F DK +GKSRFM PKEEA FSW+L+ERARIE VRTE + ELSS QWA
Sbjct: 121 QNHKFLFSDKNSGKSRFMNPKEEAKFSWHLQERARIEAVRTEALAKMEEEEHELSSIQWA 180
Query: 113 KAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
AAGISQ LD+I+ NG++SE++IT SY RLVVSVAS
Sbjct: 181 NAAGISQKNLDRIIWNGKQSEKRITKSYLRLVVSVAS 217
>emb|CDP17818.1| unnamed protein product [Coffea canephora]
Length = 445
Score = 90.5 bits (223), Expect = 2e-17
Identities = 46/97 (47%), Positives = 69/97 (71%), Gaps = 5/97 (5%)
Frame = -1
Query: 278 IEDEKFVF--VDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWA 114
+E+EK + K +++TPK+EA ++ LKE AR+E VR E E++ +QWA
Sbjct: 127 LENEKVIMNVAIKPTNSGQYLTPKQEAEYTLCLKEEARVEAVRKRIEETTENEVTFAQWA 186
Query: 113 KAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
KAAG+S++ LDK+LC+GRE++E+IT Y+RLV+SVAS
Sbjct: 187 KAAGMSKNSLDKVLCDGREAQERITRCYRRLVISVAS 223
>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
nucifera]
Length = 455
Score = 87.4 bits (215), Expect = 2e-16
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = -1
Query: 245 KAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKAAGISQHKLDKI 75
+ +S ++TPKEEA FS YLKE AR+E RT E E +SSQWA+AAG+ LDK+
Sbjct: 152 RPSRSMYLTPKEEAEFSLYLKEEARLEAARTRLRETNEHEPTSSQWAEAAGMRGATLDKM 211
Query: 74 LCNGRESEEKITSSYQRLVVSVAS 3
LC RES E+I SY+RL+ S+AS
Sbjct: 212 LCQARESRERIVFSYRRLIFSIAS 235
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 82.4 bits (202), Expect = 5e-15
Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Frame = -1
Query: 242 AGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQELSSSQWAKAAGISQHKLDKIL 72
A +S +TP+EEA F LKE A +E R E E +S+QWA+A GI + LDK+L
Sbjct: 17 AARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKML 76
Query: 71 CNGRESEEKITSSYQRLVVSVAS 3
CNGRES E+I SY+RLVVS+A+
Sbjct: 77 CNGRESRERINQSYRRLVVSIAA 99
>ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vitis
vinifera]
Length = 442
Score = 82.4 bits (202), Expect = 1e-14
Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Frame = -1
Query: 242 AGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQELSSSQWAKAAGISQHKLDKIL 72
A +S +TP+EEA F LKE A +E R E E +S+QWA+A GI + LDK+L
Sbjct: 140 AARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKML 199
Query: 71 CNGRESEEKITSSYQRLVVSVAS 3
CNGRES E+I SY+RLVVS+A+
Sbjct: 200 CNGRESRERINQSYRRLVVSIAA 222
>ref|XP_010324734.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X3 [Solanum lycopersicum]
Length = 340
Score = 80.9 bits (198), Expect = 2e-14
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = -1
Query: 278 IEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKA 108
+E E +F K ++T KEEA +SWYLKE ARIE +R E +LSS Q AKA
Sbjct: 108 MEKEDNIFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQLAKA 167
Query: 107 AGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
AG+S +LDK+L N +ES++KI Y+ LVVSVA+
Sbjct: 168 AGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAA 202
>ref|XP_010324732.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X2 [Solanum lycopersicum]
Length = 340
Score = 80.9 bits (198), Expect = 2e-14
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = -1
Query: 278 IEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKA 108
+E E +F K ++T KEEA +SWYLKE ARIE +R E +LSS Q AKA
Sbjct: 108 MEKEDNIFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQLAKA 167
Query: 107 AGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
AG+S +LDK+L N +ES++KI Y+ LVVSVA+
Sbjct: 168 AGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAA 202
>ref|XP_015063095.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Solanum
pennellii]
Length = 423
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = -1
Query: 278 IEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKA 108
+E E +F K ++T KEEA +SWYLKE ARIE +R E +LSS Q AKA
Sbjct: 108 MEKEDKIFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQLAKA 167
Query: 107 AGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
AG+S +LDK+L N +ES++KI Y+ LVVSVA+
Sbjct: 168 AGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAA 202
>ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Solanum lycopersicum]
Length = 423
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = -1
Query: 278 IEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKA 108
+E E +F K ++T KEEA +SWYLKE ARIE +R E +LSS Q AKA
Sbjct: 108 MEKEDNIFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQLAKA 167
Query: 107 AGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
AG+S +LDK+L N +ES++KI Y+ LVVSVA+
Sbjct: 168 AGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAA 202
>ref|XP_009612911.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
[Nicotiana tomentosiformis]
Length = 416
Score = 77.8 bits (190), Expect = 4e-13
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = -1
Query: 278 IEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKA 108
+E E + + K ++T KEE+ +SWYLKE ARIE +R E EL+ +Q AKA
Sbjct: 101 MEKEDKISISKPVKTGLYLTLKEESEYSWYLKEEARIETLRKRVEETSEIELNPNQLAKA 160
Query: 107 AGISQHKLDKILCNGRESEEKITSSYQRLVVSVAS 3
AG+S+ +LDK+L N + S++KI Y+ LVVSVA+
Sbjct: 161 AGMSRRRLDKLLVNAKISQKKIIKCYRGLVVSVAA 195
>ref|XP_006345495.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Solanum
tuberosum]
Length = 423
Score = 77.4 bits (189), Expect = 6e-13
Identities = 42/78 (53%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Frame = -1
Query: 227 FMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKAAGISQHKLDKILCNGRE 57
++T +EEA +SWYLKE ARIE +R E +LSS Q AKAAG+S +LDK+L N +E
Sbjct: 125 YLTHEEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQLAKAAGMSTQRLDKLLINAKE 184
Query: 56 SEEKITSSYQRLVVSVAS 3
S++KI Y+ LVVSVA+
Sbjct: 185 SQKKIIQCYRGLVVSVAA 202
>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331143|gb|ERP56878.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 276
Score = 74.7 bits (182), Expect = 2e-12
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 66
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 65 GRESEEKITSSYQRLVVSVAS 3
GRES EKI SY+RLVVS+A+
Sbjct: 182 GRESREKIIRSYRRLVVSIAT 202
>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331144|gb|ERP56879.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 284
Score = 74.7 bits (182), Expect = 2e-12
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 66
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 65 GRESEEKITSSYQRLVVSVAS 3
GRES EKI SY+RLVVS+A+
Sbjct: 182 GRESREKIIRSYRRLVVSIAT 202
>ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331142|gb|ERP56877.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 331
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 66
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 65 GRESEEKITSSYQRLVVSVAS 3
GRES EKI SY+RLVVS+A+
Sbjct: 182 GRESREKIIRSYRRLVVSIAT 202
>ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X2 [Populus euphratica]
Length = 354
Score = 74.7 bits (182), Expect = 4e-12
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 66
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGDVQELDPTSKQLAKALRMEKNTVDNVLCK 181
Query: 65 GRESEEKITSSYQRLVVSVAS 3
GRES EKI SY+RLVVS+A+
Sbjct: 182 GRESREKIIRSYRRLVVSIAT 202
>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331145|gb|ERP56880.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 74.7 bits (182), Expect = 5e-12
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 66
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 65 GRESEEKITSSYQRLVVSVAS 3
GRES EKI SY+RLVVS+A+
Sbjct: 182 GRESREKIIRSYRRLVVSIAT 202
>ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Populus euphratica]
Length = 423
Score = 74.7 bits (182), Expect = 5e-12
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 66
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGDVQELDPTSKQLAKALRMEKNTVDNVLCK 181
Query: 65 GRESEEKITSSYQRLVVSVAS 3
GRES EKI SY+RLVVS+A+
Sbjct: 182 GRESREKIIRSYRRLVVSIAT 202
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 74.7 bits (182), Expect = 5e-12
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 66
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 65 GRESEEKITSSYQRLVVSVAS 3
GRES EKI SY+RLVVS+A+
Sbjct: 182 GRESREKIIRSYRRLVVSIAT 202