BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00012580
         (4037 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I sub...  1462   0.0  
ref|XP_012849697.1| PREDICTED: DNA-directed RNA polymerase I sub...  1359   0.0  
ref|XP_009623390.1| PREDICTED: DNA-directed RNA polymerase I sub...  1299   0.0  
ref|XP_009795429.1| PREDICTED: DNA-directed RNA polymerase I sub...  1298   0.0  
ref|XP_006366498.1| PREDICTED: DNA-directed RNA polymerase I sub...  1291   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1291   0.0  
ref|XP_015061653.1| PREDICTED: DNA-directed RNA polymerase I sub...  1290   0.0  
emb|CDP07938.1| unnamed protein product [Coffea canephora]           1243   0.0  
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1238   0.0  
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub...  1238   0.0  
ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I sub...  1196   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1192   0.0  
gb|KCW65882.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus g...  1181   0.0  
ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymer...  1181   0.0  
ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I sub...  1179   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1177   0.0  
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...  1174   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1172   0.0  
gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glyci...  1170   0.0  
ref|XP_014621158.1| PREDICTED: DNA-directed RNA polymerase I sub...  1168   0.0  

>ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Sesamum
            indicum]
          Length = 1196

 Score = 1462 bits (3785), Expect = 0.0
 Identities = 718/783 (91%), Positives = 756/783 (96%)
 Frame = -3

Query: 3858 MASNSSKNDEAKAEEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNI 3679
            M  NS++NDE KAEEV +K  RPHLAEEKDYEALRE+F+HHIDSFDHMVE+G+E MLL+I
Sbjct: 1    MVGNSNRNDETKAEEVGRKTWRPHLAEEKDYEALRELFKHHIDSFDHMVEHGIERMLLSI 60

Query: 3678 KPVEVFDSFSNLKLRIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIK 3499
            KPVEVFDSFSNLKLRIWFEN EIYPPQKER SRTMADALYPFECRQAKLTYAG+FM+D+K
Sbjct: 61   KPVEVFDSFSNLKLRIWFENPEIYPPQKERFSRTMADALYPFECRQAKLTYAGRFMIDVK 120

Query: 3498 FQYGDGVIVREKVNLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERV 3319
            FQY DGV VREK+N GQFP+MLKSKLCHL+AAN PKKLV HKEEPSEMGGYFIMNGLERV
Sbjct: 121  FQYDDGVSVREKINFGQFPVMLKSKLCHLRAANDPKKLVRHKEEPSEMGGYFIMNGLERV 180

Query: 3318 VRLLILPKRNYPMSMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGF 3139
            +RLLILPKRNYPMSMVR+SFRERREGY+DKAVVIRCVREDQSAV++KLYYLNNGSARLGF
Sbjct: 181  IRLLILPKRNYPMSMVRNSFRERREGYSDKAVVIRCVREDQSAVTVKLYYLNNGSARLGF 240

Query: 3138 WIQGREYLLPVGIILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDE 2959
            WIQGREYLLPVGII+KAL +TTDHEIYVSLTCCYNEK+DRVKGSVGTQL+GERAKIILDE
Sbjct: 241  WIQGREYLLPVGIIMKALIDTTDHEIYVSLTCCYNEKYDRVKGSVGTQLVGERAKIILDE 300

Query: 2958 LQNLSLYTRAQCLQHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIF 2779
            LQN+SLYTRAQCLQHIGEHFQPLM GLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIF
Sbjct: 301  LQNMSLYTRAQCLQHIGEHFQPLMAGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIF 360

Query: 2778 MLQKLFSLVDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRS 2599
            MLQKLFSLVDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLL+ KR LQDEVDNR+
Sbjct: 361  MLQKLFSLVDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKAKRTLQDEVDNRT 420

Query: 2598 KKFELSSLADVKKVIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFL 2419
            KKFELSSLADVKKVIEK +PRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFL
Sbjct: 421  KKFELSSLADVKKVIEKNTPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFL 480

Query: 2418 RFISHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSY 2239
            RF+SHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLN+MTSSCRITSY
Sbjct: 481  RFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNNMTSSCRITSY 540

Query: 2238 YDSEGKVKDFLEVRKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIE 2059
            YDS+GKVKDFLEVRKSILKVLVS+GMTPSLPKL QAGPPEVLPVLLDGRVVGSIAS+IIE
Sbjct: 541  YDSKGKVKDFLEVRKSILKVLVSIGMTPSLPKLVQAGPPEVLPVLLDGRVVGSIASDIIE 600

Query: 2058 KAVSHLRRLKVSATSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEES 1879
            KAV HLRRLKV+AT  IPEDLEVGYIPLSMGGAYPGL+LFTSASRFVRPVRN+LIPPEE 
Sbjct: 601  KAVCHLRRLKVAATFAIPEDLEVGYIPLSMGGAYPGLHLFTSASRFVRPVRNILIPPEEG 660

Query: 1878 NNIEHIGPFEQVYMEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPR 1699
            NNIE IGPFEQVYMEISCPDGGDGGRK+VFPATH EIHPTGILSVVGNLTPWSDHNQSPR
Sbjct: 661  NNIELIGPFEQVYMEISCPDGGDGGRKNVFPATHEEIHPTGILSVVGNLTPWSDHNQSPR 720

Query: 1698 NMYQCQMGKQTMGFSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVA 1519
            NMYQCQMGKQTMGFSCQA+ +RADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVA
Sbjct: 721  NMYQCQMGKQTMGFSCQALVARADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVA 780

Query: 1518 VLA 1510
            VLA
Sbjct: 781  VLA 783



 Score =  712 bits (1839), Expect = 0.0
 Identities = 354/390 (90%), Positives = 369/390 (94%), Gaps = 1/390 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            GYIYQTE+IDLTEQN++SDR+QRSFGRSNLD+++HHLIDSDGLP+VGQRI PN+PYCSIY
Sbjct: 807  GYIYQTETIDLTEQNLRSDRSQRSFGRSNLDRSTHHLIDSDGLPYVGQRISPNEPYCSIY 866

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS+VTT KLKGSEPVYVDYVAVDVK+KKHIQKANIR RHPRNPIIGDKFSSRHGQKG
Sbjct: 867  NEITSKVTTNKLKGSEPVYVDYVAVDVKNKKHIQKANIRLRHPRNPIIGDKFSSRHGQKG 926

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF
Sbjct: 927  VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 986

Query: 955  SSSMTKKSAGSESD-SSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
            SSSM K S GSES+ SSLVDELGSML+ARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 987  SSSMKKNSVGSESESSSLVDELGSMLIARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1046

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDKFQVRSTG VDQVTRQPI       GVRFGEMERDSLLAHGAAYLLHDRLHT
Sbjct: 1047 RLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHT 1106

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETV 419
            SSDHHIADVCSLCGSILTTSLIQS KKAVRDMIGRDLPP RAPKKVTCVAC+TS GMETV
Sbjct: 1107 SSDHHIADVCSLCGSILTTSLIQSQKKAVRDMIGRDLPPGRAPKKVTCVACQTSTGMETV 1166

Query: 418  AMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            AMPYVFRYLAAELAAMNIKM LQLS+G GA
Sbjct: 1167 AMPYVFRYLAAELAAMNIKMALQLSSGPGA 1196


>ref|XP_012849697.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa2 [Erythranthe
            guttata]
          Length = 1200

 Score = 1359 bits (3518), Expect = 0.0
 Identities = 670/779 (86%), Positives = 726/779 (93%)
 Frame = -3

Query: 3846 SSKNDEAKAEEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVE 3667
            SS+   A  +   KK   PHL +EKDYEALREIF+HHIDSFD+MVE+G E M+L +KPVE
Sbjct: 8    SSQAAAASKDSNTKKSWSPHLDKEKDYEALREIFKHHIDSFDYMVEHGFEKMMLGLKPVE 67

Query: 3666 VFDSFSNLKLRIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYG 3487
            V DS +  KLRIWFEN EI+PPQK+R+++T+AD LYPFECRQA LTYAGKFMVDIK+QY 
Sbjct: 68   VVDSSTKQKLRIWFENPEIFPPQKDRATKTIADPLYPFECRQANLTYAGKFMVDIKYQYD 127

Query: 3486 DGVIVREKVNLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLL 3307
            +GV++R++V+LGQFPIMLKSK CHLK ANT KKLV  KEEPSEMGGYFI+NGLERVVRLL
Sbjct: 128  EGVVIRDRVSLGQFPIMLKSKYCHLKDANT-KKLVSLKEEPSEMGGYFILNGLERVVRLL 186

Query: 3306 ILPKRNYPMSMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQG 3127
            ILPKRNYP S+VR+SFRERREGYTDKAVVIRCVREDQSAV++KLYYLNNGSARLG WIQG
Sbjct: 187  ILPKRNYPTSVVRNSFRERREGYTDKAVVIRCVREDQSAVTVKLYYLNNGSARLGLWIQG 246

Query: 3126 REYLLPVGIILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNL 2947
            REYLLPVGIILKALTETTDHEIYVSLTCCYNEK+DRVKGSVGTQL+GERAKIILDELQNL
Sbjct: 247  REYLLPVGIILKALTETTDHEIYVSLTCCYNEKYDRVKGSVGTQLVGERAKIILDELQNL 306

Query: 2946 SLYTRAQCLQHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQK 2767
            SLYTRAQCLQHIGEHFQPLM GLEKE YSV+ADAVLRDY+FVHLD+NIDKFNLLIFMLQK
Sbjct: 307  SLYTRAQCLQHIGEHFQPLMVGLEKEGYSVIADAVLRDYVFVHLDENIDKFNLLIFMLQK 366

Query: 2766 LFSLVDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFE 2587
            LFSLVDQTSVPDN DSLQN EVLLPGHLITIY+KEKLQD+LL+ K+ALQD VDN+ K FE
Sbjct: 367  LFSLVDQTSVPDNTDSLQNHEVLLPGHLITIYVKEKLQDFLLKAKQALQDVVDNKKKNFE 426

Query: 2586 LSSLADVKKVIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFIS 2407
            +SSLADVKKVI+K  P+QIGAAIENLLKTG LVT++GLDL Q++GMTV AERLNFLRFIS
Sbjct: 427  MSSLADVKKVIDKAFPKQIGAAIENLLKTGNLVTKTGLDLPQKSGMTVLAERLNFLRFIS 486

Query: 2406 HFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSE 2227
            HFRAVHRG+ FAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITS+YDSE
Sbjct: 487  HFRAVHRGSLFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSHYDSE 546

Query: 2226 GKVKDFLEVRKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVS 2047
            G+VKDFLE+RKSI +VLVS+GM PSLPKL QAGPPEVLP+LLDGRVVGSIAS+I+ KAV+
Sbjct: 547  GQVKDFLEIRKSISRVLVSIGMIPSLPKLVQAGPPEVLPILLDGRVVGSIASDIVGKAVT 606

Query: 2046 HLRRLKVSATSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIE 1867
            HLRRLKVSATS IPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRN LIPP ESNNIE
Sbjct: 607  HLRRLKVSATSAIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNRLIPPGESNNIE 666

Query: 1866 HIGPFEQVYMEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQ 1687
            HIGPFEQVYMEISCPDGGDGGRK+VFPATH EIHPTGILSVVGNLTPWSDHNQSPRNMYQ
Sbjct: 667  HIGPFEQVYMEISCPDGGDGGRKNVFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQ 726

Query: 1686 CQMGKQTMGFSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            CQMGKQTMGFSCQAI+ RADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA
Sbjct: 727  CQMGKQTMGFSCQAINCRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 785



 Score =  643 bits (1659), Expect = 0.0
 Identities = 322/392 (82%), Positives = 353/392 (90%), Gaps = 3/392 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            GYIYQTE+IDLTE+  KSDR+Q++FGRSNLDK+SHHLIDSDGLP+ GQRI P DPYCS+Y
Sbjct: 809  GYIYQTENIDLTEKGSKSDRSQQTFGRSNLDKSSHHLIDSDGLPYAGQRIKPGDPYCSVY 868

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            N  TSRVTT+KLKGS+  Y+DYVAVDVK+K  +QKANIRFR+PRNP+IGDKFSSRHGQKG
Sbjct: 869  NGVTSRVTTSKLKGSDHAYIDYVAVDVKTKTRMQKANIRFRYPRNPVIGDKFSSRHGQKG 928

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSGV+GMRPDLIINPHAFPSRMTI MLLES+AAKGGA+ G FVDATPF
Sbjct: 929  VCSQLWPDIDMPFSGVSGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAMDGKFVDATPF 988

Query: 955  SSSMTKKSAGSESD-SSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
            SSS+   S  S S+ +SLVDELGS L+ARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 989  SSSVKNSSEESGSELTSLVDELGSKLIARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1048

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDKFQVRSTG VD+VTRQPI       GVRFGEMERDSLLAHGAAYLLHDRLH 
Sbjct: 1049 RLRHMVSDKFQVRSTGIVDEVTRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHM 1108

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMI-GRDLPPIRAPKKVTCVACKTSKGMET 422
            SSDHHIA+VCS+CGSILTTS+IQSN KA+RDMI GRDLP  R PKKVTCV C+TSKGMET
Sbjct: 1109 SSDHHIANVCSICGSILTTSIIQSNTKAIRDMIVGRDLPGGRTPKKVTCVVCQTSKGMET 1168

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQL-SNGAGA 329
            V+MPYVFRYLAAELAAMNIKMTL+L S+GAGA
Sbjct: 1169 VSMPYVFRYLAAELAAMNIKMTLELSSSGAGA 1200


>ref|XP_009623390.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nicotiana
            tomentosiformis]
          Length = 1185

 Score = 1299 bits (3361), Expect = 0.0
 Identities = 634/774 (81%), Positives = 701/774 (90%)
 Frame = -3

Query: 3831 EAKAEEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSF 3652
            E + E   K   RPHL +EKDY AL+E+F HHI+SFDHMV+ GLETMLLNIKPVEV DSF
Sbjct: 2    EDQNEGKNKAMSRPHLLQEKDYSALKELFSHHIESFDHMVDNGLETMLLNIKPVEVLDSF 61

Query: 3651 SNLKLRIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIV 3472
            S LKLRIWF   EI+PPQKER+S+TM DALYPFECRQAKL+Y GKF+VDI FQYGDG ++
Sbjct: 62   SKLKLRIWFGKPEIFPPQKERTSKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVI 121

Query: 3471 REKVNLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKR 3292
            REK N GQFPIMLKSKLCHL+AA+  KKL  HKEEPSEMGGYFI+ GLERV+RLLILPKR
Sbjct: 122  REKFNFGQFPIMLKSKLCHLRAADDSKKLTAHKEEPSEMGGYFILKGLERVIRLLILPKR 181

Query: 3291 NYPMSMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLL 3112
            NYPMSMVR+SFR+RREGY+DKAVVIRCVREDQSAVS+KLYYLNNGSARLGFWIQGREYLL
Sbjct: 182  NYPMSMVRNSFRDRREGYSDKAVVIRCVREDQSAVSVKLYYLNNGSARLGFWIQGREYLL 241

Query: 3111 PVGIILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTR 2932
            PVGIILKAL +TTDHEIYV+LTCCYNE++DRVKG+VGTQL+GERAKIILDE+Q LSL+TR
Sbjct: 242  PVGIILKALVDTTDHEIYVNLTCCYNEEYDRVKGAVGTQLVGERAKIILDEVQALSLFTR 301

Query: 2931 AQCLQHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLV 2752
            AQCLQHIGEHFQP+M G++  SY+ VADAVLRDYIFVHLD+N DKFNLL+FMLQKLFSL+
Sbjct: 302  AQCLQHIGEHFQPVMTGMQNYSYNTVADAVLRDYIFVHLDNNHDKFNLLVFMLQKLFSLI 361

Query: 2751 DQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLA 2572
            DQTSV DNPDSLQNQEVLLPGHLITIYLKEKLQDWLLR++R LQ+E D   KKFELSSLA
Sbjct: 362  DQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRLQRMLQEETDGEKKKFELSSLA 421

Query: 2571 DVKKVIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAV 2392
            DVKK IEK +P+Q+  AIEN+LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRF+SHFRAV
Sbjct: 422  DVKKTIEKNAPKQMSLAIENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAV 481

Query: 2391 HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKD 2212
            HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT+SCRITSYYD +G +KD
Sbjct: 482  HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDLKGNIKD 541

Query: 2211 FLEVRKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRL 2032
            F ++R+SIL+VL ++GM PS PKL + GPPE L VLLDGR+VGS+ S+ IE+AV++LRRL
Sbjct: 542  FFKIRESILRVLTTIGMIPSAPKLVKGGPPEELSVLLDGRIVGSMRSDKIEEAVTYLRRL 601

Query: 2031 KVSATSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPF 1852
            KVSA S IP DLEVGYIPLSM GAYPGLYLFTS SRFVRPVRN+  P EE N++E IGPF
Sbjct: 602  KVSAIS-IPVDLEVGYIPLSMSGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPF 660

Query: 1851 EQVYMEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGK 1672
            EQVYMEISCPDGGDGGRK+VFPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQMGK
Sbjct: 661  EQVYMEISCPDGGDGGRKNVFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGK 720

Query: 1671 QTMGFSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            QTMGFS QA++ RADQKLYHLQTPQTPIVRTK YEKY +DDYPLGTNAIVAVLA
Sbjct: 721  QTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLA 774



 Score =  637 bits (1642), Expect = 0.0
 Identities = 323/391 (82%), Positives = 348/391 (89%), Gaps = 2/391 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G+IYQTE+IDLTEQ+ KSDRAQR F RS LDK+SH LIDSDGLP+VGQRI P++PYC+IY
Sbjct: 798  GHIYQTETIDLTEQSAKSDRAQRVFRRSYLDKSSHQLIDSDGLPYVGQRINPHEPYCTIY 857

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS+ T  KLKGSEPV VDYVAVDVK+K H+QKANIRFR  RNP+IGDKFSSRHGQKG
Sbjct: 858  NEITSQTTNMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 917

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHG FVDATPF
Sbjct: 918  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 977

Query: 955  SSSMTKKSAGSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR 776
            S++M  K A SES SSLVDELGSML A GFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR
Sbjct: 978  SNTM--KDAESES-SSLVDELGSMLTASGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR 1034

Query: 775  LRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHTS 596
            LRHMVSDKFQVRSTG VDQVTRQPI       G+RFGEMERDSLLAHGAAYLLHDRLHTS
Sbjct: 1035 LRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTS 1094

Query: 595  SDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGR--DLPPIRAPKKVTCVACKTSKGMET 422
            SDHHIADVCS CGSILT SLIQ  K+ +++ + +   LPP R PKKVTC+AC+TSKGMET
Sbjct: 1095 SDHHIADVCSECGSILTASLIQPPKQKMQEEMRKISGLPPAREPKKVTCLACRTSKGMET 1154

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            VAMPYVF+YLAAELAAMNIKMTL+LSNGAGA
Sbjct: 1155 VAMPYVFKYLAAELAAMNIKMTLKLSNGAGA 1185


>ref|XP_009795429.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nicotiana
            sylvestris]
          Length = 1185

 Score = 1298 bits (3358), Expect = 0.0
 Identities = 635/774 (82%), Positives = 701/774 (90%)
 Frame = -3

Query: 3831 EAKAEEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSF 3652
            E + E   K   RPHL +EKDY AL+E+F HHI+SFDHMV+ GLETMLL+IKPVEV DSF
Sbjct: 2    EDQNEGKNKAMSRPHLLQEKDYSALKELFSHHIESFDHMVDNGLETMLLSIKPVEVLDSF 61

Query: 3651 SNLKLRIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIV 3472
              LKLRIWF   EI+PPQKER+S+TM DALYPFECRQAKL+Y GKF+VDI FQYGDG ++
Sbjct: 62   FKLKLRIWFGKPEIFPPQKERTSKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVI 121

Query: 3471 REKVNLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKR 3292
            REK N GQFPIMLKSKLCHL+AA+  KKL  HKEEPSEMGGYFI+ GLERV+RLLILPKR
Sbjct: 122  REKFNFGQFPIMLKSKLCHLRAADDSKKLTAHKEEPSEMGGYFILKGLERVIRLLILPKR 181

Query: 3291 NYPMSMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLL 3112
            NYPMSMVR+SFR+RREGY+DKAVVIRCVREDQSAVS+KLYYLNNGSARLGFWIQGREYLL
Sbjct: 182  NYPMSMVRNSFRDRREGYSDKAVVIRCVREDQSAVSVKLYYLNNGSARLGFWIQGREYLL 241

Query: 3111 PVGIILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTR 2932
            PVGIILKAL +TTDHEIYV+LTCCYNE++DRVKGSVGTQL+GERAKIILDE+Q LSL+TR
Sbjct: 242  PVGIILKALVDTTDHEIYVNLTCCYNEEYDRVKGSVGTQLVGERAKIILDEVQALSLFTR 301

Query: 2931 AQCLQHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLV 2752
            AQCLQHIGEHFQP+M G++  SY+ VADAVLRDYIFVHLD+N DKFNLLIFMLQKLFSL+
Sbjct: 302  AQCLQHIGEHFQPVMTGMQNCSYNTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLI 361

Query: 2751 DQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLA 2572
            DQTSV DNPDSLQNQEVLLPGHLITIYLKEKLQDWLLR++R LQ+E D   KKFELSSLA
Sbjct: 362  DQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLA 421

Query: 2571 DVKKVIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAV 2392
            DVKK IEK +P+Q+  AIEN+LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRF+SHFRAV
Sbjct: 422  DVKKTIEKNAPKQMSLAIENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAV 481

Query: 2391 HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKD 2212
            HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT+SCRITSYYDS+G +KD
Sbjct: 482  HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNIKD 541

Query: 2211 FLEVRKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRL 2032
            F ++R+SIL+VL ++GM PS PKL + GPPE L VLLDGR+VGS+ S+ IE+AV++LRRL
Sbjct: 542  FFKIRESILRVLTTIGMIPSAPKLVKGGPPEELSVLLDGRIVGSMRSDKIEEAVTYLRRL 601

Query: 2031 KVSATSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPF 1852
            KVSA S IP DLEVGYIPLSM GAYPGLYLFTS SRFVRPVRN+  P EE N++E IGPF
Sbjct: 602  KVSAIS-IPVDLEVGYIPLSMSGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPF 660

Query: 1851 EQVYMEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGK 1672
            EQVYMEISCPDGGDGGRK+VFPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQMGK
Sbjct: 661  EQVYMEISCPDGGDGGRKNVFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGK 720

Query: 1671 QTMGFSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            QTMGFS QA++ RADQKLYHLQTPQTPIVRTK YEKY +DDYPLGTNAIVAVLA
Sbjct: 721  QTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLA 774



 Score =  637 bits (1644), Expect = 0.0
 Identities = 323/391 (82%), Positives = 348/391 (89%), Gaps = 2/391 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G+IYQTE+IDLTEQ+ KSDRAQR F RS LDK+SH LIDSDGLP+VGQRI P++PYC+IY
Sbjct: 798  GHIYQTETIDLTEQSAKSDRAQRVFRRSYLDKSSHQLIDSDGLPYVGQRINPHEPYCTIY 857

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS+ T  KLKGSEPV VDYVAVDVK+K H+QKANIRFR  RNP+IGDKFSSRHGQKG
Sbjct: 858  NEITSQTTNMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 917

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHG FVDATPF
Sbjct: 918  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 977

Query: 955  SSSMTKKSAGSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR 776
            S++M  K A SES SSLVDELGSML A GFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR
Sbjct: 978  SNTM--KDAESES-SSLVDELGSMLTASGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR 1034

Query: 775  LRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHTS 596
            LRHMVSDKFQVRSTG VDQVTRQPI       G+RFGEMERDSLLAHGAAYLLHDRLHTS
Sbjct: 1035 LRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTS 1094

Query: 595  SDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGR--DLPPIRAPKKVTCVACKTSKGMET 422
            SDHHIADVCS CGSILT SLIQ  K+ +++ + +   LPP R PKKVTC+AC+TSKGMET
Sbjct: 1095 SDHHIADVCSECGSILTASLIQPPKQKMQEEVRKISGLPPAREPKKVTCLACRTSKGMET 1154

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            VAMPYVF+YLAAELAAMNIKMTL+LSNGAGA
Sbjct: 1155 VAMPYVFKYLAAELAAMNIKMTLKLSNGAGA 1185


>ref|XP_006366498.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Solanum
            tuberosum]
          Length = 1179

 Score = 1291 bits (3341), Expect = 0.0
 Identities = 623/770 (80%), Positives = 697/770 (90%)
 Frame = -3

Query: 3819 EEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLK 3640
            EE  K   RPHL  EKDY AL+E+F HHI+SFD+MV+ GLETMLLNIKP+E+ DSFS+LK
Sbjct: 3    EEKPKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLK 62

Query: 3639 LRIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKV 3460
            LRIWF   E++PPQKER+S+TM DALYPFECRQAKL+Y GKF+VDI FQYGDG ++REK 
Sbjct: 63   LRIWFGKPELFPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREKF 122

Query: 3459 NLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPM 3280
            N GQFPIMLKSKLCHL+ A+  +KL+ +KEEPSEMGGYFI+ GLERV+RL+ILPKRNYP 
Sbjct: 123  NFGQFPIMLKSKLCHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPT 182

Query: 3279 SMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGI 3100
            SM R+SFR+RREGY+DKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGI
Sbjct: 183  SMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGI 242

Query: 3099 ILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCL 2920
            ILKAL +TTDHEIYV+LTCCYNE+ DRVKGSVGTQL+GERAKIILDE+Q LSL+TRAQCL
Sbjct: 243  ILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCL 302

Query: 2919 QHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTS 2740
            +HIGEHFQP++ G++ +SY  VADAVLRDYIFVHLD+N DKFNLLIFMLQKLFSL+DQTS
Sbjct: 303  RHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTS 362

Query: 2739 VPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKK 2560
            V DNPDSLQNQEVLLPGHLITIYLKEKLQDWLL+++R+LQ+E D   KKFELSSL DVKK
Sbjct: 363  VLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKK 422

Query: 2559 VIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGA 2380
             IEK +P+QIG AIE++LKTGRL TQSGLDLQQRAGMTVQAE+LNFLRF+SHFRAVHRGA
Sbjct: 423  AIEKNAPKQIGLAIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGA 482

Query: 2379 SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEV 2200
            SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT+SCRITSYYDS+G VKDF ++
Sbjct: 483  SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKM 542

Query: 2199 RKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSA 2020
            R SIL VL+++GMTP  PKL Q GPPE+L VLLDGR+ G I S++IEKAV+HLRRLK+S+
Sbjct: 543  RMSILNVLIAIGMTPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSS 602

Query: 2019 TSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVY 1840
            TS IP DLEVGYIPLSM GAYPGLYLFTS SRFVRPVRN+  P EE N++E +GPFEQVY
Sbjct: 603  TSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVY 662

Query: 1839 MEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMG 1660
            MEISCPDGGDGGRK +FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMG
Sbjct: 663  MEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMG 722

Query: 1659 FSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            FS QA++ RADQKLYHLQTPQTPIVRTK YEKY +DDYPLGTNAIVAVLA
Sbjct: 723  FSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLA 772



 Score =  621 bits (1601), Expect = 0.0
 Identities = 314/389 (80%), Positives = 345/389 (88%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G+IYQTE+IDLTEQ+ KSDRAQR F RSNLDK+SH LID+DGLP+VGQRI PN+PYCSIY
Sbjct: 796  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSIY 855

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS+ T+ KLKGSEPV VDYVAVDVK+K H+QKANIRFR  RNP+IGDKFSSRHGQKG
Sbjct: 856  NEITSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 915

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFS VTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHG FVDATPF
Sbjct: 916  VCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 975

Query: 955  SSSMTKKSAGSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR 776
            S++M  K + SES SSLVD+LGSML   GFN+HG EVLYSGVYGTELTC IFIGPVYYQR
Sbjct: 976  SNTM--KESESES-SSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGPVYYQR 1032

Query: 775  LRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHTS 596
            LRHMVSDKFQVRSTG+VD +TRQPI       GVRFGEMERDSLLAHGAAYLLHDRLHTS
Sbjct: 1033 LRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHTS 1092

Query: 595  SDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETVA 416
            SDHHIADVCS CGS+LT+S+IQ  K+AV+ ++ +   P R PKKVTCVAC++SKGMETVA
Sbjct: 1093 SDHHIADVCSECGSVLTSSVIQPPKRAVQVILKQ--LPAREPKKVTCVACRSSKGMETVA 1150

Query: 415  MPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            MPYVF+YLAAELAAMNIKMTL+LSN AGA
Sbjct: 1151 MPYVFKYLAAELAAMNIKMTLKLSNEAGA 1179


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Solanum lycopersicum]
          Length = 1184

 Score = 1291 bits (3341), Expect = 0.0
 Identities = 624/775 (80%), Positives = 699/775 (90%)
 Frame = -3

Query: 3834 DEAKAEEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDS 3655
            +E    +  K   RPHL  EKDY AL+E+F HHI+SFD+MV+ GLETMLLNIKP+E+ DS
Sbjct: 3    EEKPKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDS 62

Query: 3654 FSNLKLRIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVI 3475
            FS+LKLRIWF   E++PPQKER+S+ M DALYPFECRQAK++Y+GKF+VDI FQYGDG +
Sbjct: 63   FSSLKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAV 122

Query: 3474 VREKVNLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPK 3295
            +REK N GQFPIMLKSKLCHL+ A+  KKLV +KEEPSEMGGYFI+ GLERV+RL+ILPK
Sbjct: 123  IREKFNFGQFPIMLKSKLCHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPK 182

Query: 3294 RNYPMSMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYL 3115
            RNYP SM R+SFR+RREGY+DKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYL
Sbjct: 183  RNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYL 242

Query: 3114 LPVGIILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYT 2935
            LPVGIILKAL +TTDHEIYV+LTCCYNE+ DRVKGSVGTQL+GERAKIILDE+Q LSL+T
Sbjct: 243  LPVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFT 302

Query: 2934 RAQCLQHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSL 2755
            RAQCL+HIGEHFQP++ G++ +SY  VADAVLRDYIFVHLD+N DKFNLLIFMLQKLFSL
Sbjct: 303  RAQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSL 362

Query: 2754 VDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSL 2575
            +DQTSV DNPDSLQNQEVLLPGHLITIYLKEKLQDWLL+++R+LQ+E D   KKFELSSL
Sbjct: 363  IDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSL 422

Query: 2574 ADVKKVIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRA 2395
             DVKK IEK +P+QIG  IE++LKTGRL TQSGLDLQQRAGMTVQAE+LNFLRF+SHFRA
Sbjct: 423  TDVKKAIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRA 482

Query: 2394 VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVK 2215
            VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT+SCRITSYYDS+G VK
Sbjct: 483  VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVK 542

Query: 2214 DFLEVRKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRR 2035
            DF ++R SIL VL+++GMTPS PKL QAGPPE+L VLLDGR+ G I S++IEKAV+HLRR
Sbjct: 543  DFFKMRMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRR 602

Query: 2034 LKVSATSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGP 1855
            LK+S+TS IP DLEVGYIPLSM GAYPGLYLFTS SRFVRPVRN+  P EE N++E IGP
Sbjct: 603  LKLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGP 662

Query: 1854 FEQVYMEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMG 1675
            FEQVYMEISCPDGGDGGRK +FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQMG
Sbjct: 663  FEQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMG 722

Query: 1674 KQTMGFSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            KQTMGFS QA++ RADQKLYHLQTPQTPIVRTK YEKY +DDYPLGTNAIVAVLA
Sbjct: 723  KQTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLA 777



 Score =  622 bits (1603), Expect = 0.0
 Identities = 314/389 (80%), Positives = 344/389 (88%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G+IYQTE+IDLTEQ+ KSDRAQR F RSNLDK+SH LIDSDGLP+VGQRI PN+PYCSIY
Sbjct: 801  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIY 860

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS+ T  KLKGSEPV VDYVAVDVK+K H+QKANIRFR  RNP+IGDKFSSRHGQKG
Sbjct: 861  NEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPVIGDKFSSRHGQKG 920

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFS VTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHG FVDATPF
Sbjct: 921  VCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 980

Query: 955  SSSMTKKSAGSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR 776
            S++M  K + SES SSLVD+LGSML   GFN+HG EVLYSGVYGTELTC IFIGPVYYQR
Sbjct: 981  SNTM--KESESES-SSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQR 1037

Query: 775  LRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHTS 596
            LRHMVSDKFQVRSTG+VD +TRQPI       GVRFGEMERDSLLAHGA+YLLHDRLHTS
Sbjct: 1038 LRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGASYLLHDRLHTS 1097

Query: 595  SDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETVA 416
            SDHHIADVCS CGS+LT+S+IQ  K+AV+ ++ +   P R PKKVTCVAC++SKGMETVA
Sbjct: 1098 SDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQ--LPAREPKKVTCVACRSSKGMETVA 1155

Query: 415  MPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            MPYVF+YLAAELAAMNIKMTL+LSN AGA
Sbjct: 1156 MPYVFKYLAAELAAMNIKMTLKLSNEAGA 1184


>ref|XP_015061653.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Solanum
            pennellii]
          Length = 1184

 Score = 1290 bits (3339), Expect = 0.0
 Identities = 622/775 (80%), Positives = 699/775 (90%)
 Frame = -3

Query: 3834 DEAKAEEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDS 3655
            +E    +  K   RPHL  EKDY AL+E+F HHI+SFD+MV+ GLETMLLNIKP+E+ DS
Sbjct: 3    EEKPKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDS 62

Query: 3654 FSNLKLRIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVI 3475
            FS+LKLRIWF   E++PPQKER+S+ M DALYPFECRQAK++Y+GKF+VDI FQYGDG +
Sbjct: 63   FSSLKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAV 122

Query: 3474 VREKVNLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPK 3295
            +REK N GQFPIMLKSKLCHL+ A+  KKL+ +KEEPSEMGGYFI+ GLERV+RL+ILPK
Sbjct: 123  IREKFNFGQFPIMLKSKLCHLRGADDSKKLIAYKEEPSEMGGYFILKGLERVIRLIILPK 182

Query: 3294 RNYPMSMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYL 3115
            RNYP SM R+SFR+RREGY+DKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYL
Sbjct: 183  RNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYL 242

Query: 3114 LPVGIILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYT 2935
            LPVGIILKAL +TTDHEIYV+LTCCYNE+ DRVKGSVGTQL+GERAKIILDE+Q LSL+T
Sbjct: 243  LPVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFT 302

Query: 2934 RAQCLQHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSL 2755
            RAQCL+HIGEHFQP++ G++ +SY  VADAVLRDY+FVHLD+N DKFNLLIFMLQKLFSL
Sbjct: 303  RAQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYVFVHLDNNHDKFNLLIFMLQKLFSL 362

Query: 2754 VDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSL 2575
            +DQTSV DNPDSLQNQEVLLPGHLITIYLKEKLQDWLL+++R+LQ+E D   KKFELSSL
Sbjct: 363  IDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSL 422

Query: 2574 ADVKKVIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRA 2395
             DVKK IEK +P+QIG  IE++LKTGRL TQSGLDLQQRAGMTVQAE+LNFLRF+SHFRA
Sbjct: 423  TDVKKAIEKNAPKQIGLVIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRA 482

Query: 2394 VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVK 2215
            VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT+SCRITSYYDS+G VK
Sbjct: 483  VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVK 542

Query: 2214 DFLEVRKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRR 2035
            DF ++R SIL VL+++GMTPS PKL QAGPPE+L VLLDGR+ G I S++IEKAV+HLRR
Sbjct: 543  DFFKMRMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRR 602

Query: 2034 LKVSATSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGP 1855
            LK+S+TS IP DLEVGYIPLSM GAYPGLYLFTS SRFVRPVRN+  P EE N++E IGP
Sbjct: 603  LKLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGP 662

Query: 1854 FEQVYMEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMG 1675
            FEQVYMEISCPDGGDGGRK +FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQMG
Sbjct: 663  FEQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMG 722

Query: 1674 KQTMGFSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            KQTMGFS QA++ RADQKLYHLQTPQTPIVRTK YEKY +DDYPLGTNAIVAVLA
Sbjct: 723  KQTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLA 777



 Score =  624 bits (1608), Expect = 0.0
 Identities = 315/389 (80%), Positives = 345/389 (88%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G+IYQTE+IDLTEQ+ KSDRAQR F RSNLDK+SH LIDSDGLP+VGQRI PN+PYCSIY
Sbjct: 801  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIY 860

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS+ T+ KLKGSEPV VDYVAVDVK+K H+QKANIRFR  RNP+IGDKFSSRHGQKG
Sbjct: 861  NEITSQTTSMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPVIGDKFSSRHGQKG 920

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFS VTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHG FVDATPF
Sbjct: 921  VCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 980

Query: 955  SSSMTKKSAGSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQR 776
            S++M  K + SES SSLVD+LGSML   GFN+HG EVLYSGVYGTELTC IFIGPVYYQR
Sbjct: 981  SNTM--KESESES-SSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQR 1037

Query: 775  LRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHTS 596
            LRHMVSDKFQVRSTG+VD +TRQPI       GVRFGEMERDSLLAHGAAYLLHDRLHTS
Sbjct: 1038 LRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHTS 1097

Query: 595  SDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETVA 416
            SDHHIADVCS CGS+LT+S+IQ  K+AV+ ++ +   P R PKKVTCVAC++SKGMETVA
Sbjct: 1098 SDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQ--LPAREPKKVTCVACRSSKGMETVA 1155

Query: 415  MPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            MPYVF+YLAAELAAMNIKMTL+LSN AGA
Sbjct: 1156 MPYVFKYLAAELAAMNIKMTLKLSNEAGA 1184


>emb|CDP07938.1| unnamed protein product [Coffea canephora]
          Length = 1209

 Score = 1243 bits (3217), Expect = 0.0
 Identities = 614/795 (77%), Positives = 688/795 (86%), Gaps = 19/795 (2%)
 Frame = -3

Query: 3837 NDEAKAEEVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFD 3658
            ND        K+   PHL +EKDY AL E+FRHHI+SFDHMVEYG+ETMLLNIKPV+VF 
Sbjct: 6    NDNESNYAYGKRTLAPHLLKEKDYSALEELFRHHIESFDHMVEYGIETMLLNIKPVQVFH 65

Query: 3657 SFSNLKLR-------------------IWFENNEIYPPQKERSSRTMADALYPFECRQAK 3535
              SN KLR                   +WF   EI+PPQ ER  RTM DALYPFECRQA+
Sbjct: 66   PLSNQKLRNILFYHLITAWFGSLTDTILWFGKPEIFPPQTERQLRTMKDALYPFECRQAR 125

Query: 3534 LTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEM 3355
            ++Y G FM+DI FQYGDG ++REK N GQFPIMLKSKLC+L+    PKKLV  KEE SEM
Sbjct: 126  ISYTGTFMMDICFQYGDGAVIREKFNFGQFPIMLKSKLCYLRNL-PPKKLVSLKEEQSEM 184

Query: 3354 GGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREGYTDKAVVIRCVREDQSAVSLKL 3175
            GGYFI+NGLERVVRLLILPKRNYP SMVR+SFRERREGYTDKAVVIRCVREDQSAVSL+L
Sbjct: 185  GGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDKAVVIRCVREDQSAVSLRL 244

Query: 3174 YYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQ 2995
            YYL+NGSARL FWIQGREY+LPVG++LKAL +TTDHEI+  LT CY++ +D VKGSVG+Q
Sbjct: 245  YYLSNGSARLAFWIQGREYMLPVGVMLKALADTTDHEIFACLTSCYDDNYDCVKGSVGSQ 304

Query: 2994 LLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHL 2815
            L+GERAKIILDE+Q+LSL+T  QCLQHIGEHFQP+M GLE ES SVVA AVL+DYIFVHL
Sbjct: 305  LVGERAKIILDEVQDLSLFTHKQCLQHIGEHFQPVMIGLENESPSVVAAAVLKDYIFVHL 364

Query: 2814 DDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRV 2635
            D+N DKFNLLIFM+QKLFSLVD TS+PDNPDSLQN EVLLPGHLITIYLKEKLQ+WLL+ 
Sbjct: 365  DNNHDKFNLLIFMVQKLFSLVDHTSMPDNPDSLQNHEVLLPGHLITIYLKEKLQEWLLKT 424

Query: 2634 KRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRA 2455
            K  LQDE  N S KF+++SLAD+KK+IEK SP+QI +AI+N+LKTG L+TQSGLDLQQRA
Sbjct: 425  KNLLQDEA-NSSNKFDINSLADIKKLIEKNSPKQISSAIDNMLKTGTLLTQSGLDLQQRA 483

Query: 2454 GMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLL 2275
            GMTVQAERLNFLRF+SHFRAVHRG+SFAGLRTT+VRKLLPESWGFLCPVHTPDGEPCGLL
Sbjct: 484  GMTVQAERLNFLRFLSHFRAVHRGSSFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLL 543

Query: 2274 NHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDG 2095
            NHM+SSCRITSYYD++G V+DFL+ R SIL VLV VGMTPSLPKL QAGPP+VL VLLDG
Sbjct: 544  NHMSSSCRITSYYDNKGNVRDFLKTRMSILSVLVGVGMTPSLPKLVQAGPPKVLSVLLDG 603

Query: 2094 RVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVR 1915
            RVVGSI S+++EKAV+H+RRLK+SAT+ IPEDLEVGY+PLSM GAYPGL+LFTS SRFVR
Sbjct: 604  RVVGSIPSDLVEKAVTHMRRLKLSATAQIPEDLEVGYVPLSMCGAYPGLFLFTSPSRFVR 663

Query: 1914 PVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGRKDVFPATHGEIHPTGILSVVGN 1735
            PVRN+ IPPEE N  E IGPFEQVYMEISCPDGG GGRK +FPATH EIHPTGILSVV N
Sbjct: 664  PVRNISIPPEEGNKFELIGPFEQVYMEISCPDGGGGGRKSMFPATHEEIHPTGILSVVAN 723

Query: 1734 LTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNI 1555
            LTPWSDHNQSPRNMYQCQMGKQTMGF  QA+HSRADQKLYHLQTPQTPIVRTK YEKY+I
Sbjct: 724  LTPWSDHNQSPRNMYQCQMGKQTMGFPSQALHSRADQKLYHLQTPQTPIVRTKAYEKYHI 783

Query: 1554 DDYPLGTNAIVAVLA 1510
            D++PLGTNAIVAVLA
Sbjct: 784  DEFPLGTNAIVAVLA 798



 Score =  627 bits (1616), Expect = 0.0
 Identities = 312/390 (80%), Positives = 343/390 (87%), Gaps = 1/390 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G+IYQTE+IDLTEQ   S   QR F RSNLDK+S HL+DSDGLP+VGQRI PN+PYCSIY
Sbjct: 822  GHIYQTETIDLTEQRSNSGHGQRIFRRSNLDKSSQHLVDSDGLPYVGQRIKPNEPYCSIY 881

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS  ++TKLKGSE V VDYVAVDVK+K ++QK NIRFR PRNPIIGDKFSSRHGQKG
Sbjct: 882  NEITSSTSSTKLKGSESVVVDYVAVDVKNKNNLQKVNIRFRRPRNPIIGDKFSSRHGQKG 941

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPF+G+TGMRPDLIINPHAFPSRMTI MLLESIAAKGGALHG F+DATPF
Sbjct: 942  VCSQLWPDIDMPFAGLTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGALHGKFMDATPF 1001

Query: 955  SSSMTKKSAGSESD-SSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
            +S + K + G ES+ SSLVDELGSML A GFNYHG EVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 1002 TSLLKKGNEGQESESSSLVDELGSMLTAYGFNYHGSEVLYSGVYGTELTCEIFIGPVYYQ 1061

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDKFQVRSTG VDQ+TRQPI       G+RFGEMERDSLLAHGAAYLLHDRLH 
Sbjct: 1062 RLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHI 1121

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETV 419
            SSDHH+ADVCS+CGS+LTTSLI + ++A+R++IG  LPP R PKKV CVAC+TSKGMETV
Sbjct: 1122 SSDHHVADVCSICGSLLTTSLIPTKQRAIREIIG--LPPGRIPKKVMCVACQTSKGMETV 1179

Query: 418  AMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            AMPYVFRYLAAELAAMNIKMTLQLS+GA A
Sbjct: 1180 AMPYVFRYLAAELAAMNIKMTLQLSSGAEA 1209


>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X2
            [Vitis vinifera] gi|731414307|ref|XP_010659084.1|
            PREDICTED: DNA-directed RNA polymerase I subunit RPA2
            isoform X2 [Vitis vinifera]
          Length = 1169

 Score = 1238 bits (3204), Expect = 0.0
 Identities = 600/754 (79%), Positives = 680/754 (90%)
 Frame = -3

Query: 3771 DYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPPQKE 3592
            DYE LRE+F+HHIDSFDH+VE+GLET+L+++KPVEV DSF+  KLRIWF   E+YPPQKE
Sbjct: 7    DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYPPQKE 66

Query: 3591 RSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKLCHL 3412
            RS+RTM DALYPFECRQAK++Y+GK + D+ FQYG+GV +REK NLGQFPIMLKSKLCHL
Sbjct: 67   RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHL 126

Query: 3411 KAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREGYTD 3232
            + A+ P+KLV  KEE SEMGGYFI+NGLERVVRLLILPKRNYPMSMVR+SFR+RREGYTD
Sbjct: 127  RGAD-PQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 185

Query: 3231 KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVS 3052
            KAVVIRCVREDQSAV++KLYYL NGSARLGFWIQGREYLLPVG++LKAL +TTDHEIY S
Sbjct: 186  KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 245

Query: 3051 LTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGGLEK 2872
            LTCCY+EK++  KG+VGTQL+GER KIILDE+++LSL+TR QCLQHIGEHFQ +M GLE 
Sbjct: 246  LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 305

Query: 2871 ESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLP 2692
            ESYS+VADAVLR+YIFVHLD+N DKFNLLIFM+QKLFSL+DQTSVPDNPD LQNQEVLLP
Sbjct: 306  ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 365

Query: 2691 GHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAAIEN 2512
            GHLITIYLKEKLQ+WL + +R LQDE+ N+ K FE SSLA VKKV++K   RQI  A+EN
Sbjct: 366  GHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVKKVMDKNPSRQISLAVEN 424

Query: 2511 LLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKLLPE 2332
            +LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRF+SHFRAVHRGASFAGLRTTSVRKLLPE
Sbjct: 425  MLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 484

Query: 2331 SWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGMTPS 2152
            +WGFLCPVHTPDGEPCGLLNHM S+CRITSY+DS G  +DF ++R SIL VL+ +GMTP+
Sbjct: 485  AWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPA 544

Query: 2151 LPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYIPLS 1972
            LPKL QAGPPEVL V+LDGRVVGSI S  +E AV+HLRRLKVSA SVIP+DLEVGYIPLS
Sbjct: 545  LPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLS 604

Query: 1971 MGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGRKDV 1792
            MGGAYPGLYLFTS SRFVRPVRN+ IP EE ++IE IGPFEQVYMEI CPDG DGGR+++
Sbjct: 605  MGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNI 664

Query: 1791 FPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQKLYH 1612
            FPATH EIHPTG+LSVV +LTPWSDHNQSPRNMYQCQMGKQTM FS QAI+ RADQKLYH
Sbjct: 665  FPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYH 724

Query: 1611 LQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LQTPQTPIVRT  Y KY++D++P GTNAIVAVLA
Sbjct: 725  LQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLA 758



 Score =  633 bits (1633), Expect = 0.0
 Identities = 319/391 (81%), Positives = 346/391 (88%), Gaps = 2/391 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDL+++N KSDR QR F RSN+DK+++ LIDSDGLP+VGQ I PN+PYCSIY
Sbjct: 782  GQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIY 841

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS    TKLKGSEPV VDYVA+D K+KKH QK NIRFR PRNPIIGDKFSSRHGQKG
Sbjct: 842  NEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 901

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSGVTGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+LHG FVDATPF
Sbjct: 902  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 961

Query: 955  SSSMTKKS--AGSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 782
            S S+ K +  AGSES SSLVDELGSML + GFNYHGVEVLYSG YGTELTCEIFIGPVYY
Sbjct: 962  SDSLRKANGEAGSES-SSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYY 1020

Query: 781  QRLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLH 602
            QRLRHMVSDKFQVRSTG VDQVTRQPI       G+RFGEMERDS+LAHGAAYLLHDRLH
Sbjct: 1021 QRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLH 1080

Query: 601  TSSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMET 422
            T SDHHIADVCSLCGSILTTS+IQ  K+AVR++ G  LPP RAPKKVTC AC+TSKGMET
Sbjct: 1081 TCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGG--LPPGRAPKKVTCHACQTSKGMET 1138

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            V+MPY+FR+LAAELAAMNIKMTLQLSNGAGA
Sbjct: 1139 VSMPYIFRFLAAELAAMNIKMTLQLSNGAGA 1169


>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Vitis vinifera]
          Length = 1178

 Score = 1238 bits (3204), Expect = 0.0
 Identities = 600/754 (79%), Positives = 680/754 (90%)
 Frame = -3

Query: 3771 DYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPPQKE 3592
            DYE LRE+F+HHIDSFDH+VE+GLET+L+++KPVEV DSF+  KLRIWF   E+YPPQKE
Sbjct: 16   DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYPPQKE 75

Query: 3591 RSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKLCHL 3412
            RS+RTM DALYPFECRQAK++Y+GK + D+ FQYG+GV +REK NLGQFPIMLKSKLCHL
Sbjct: 76   RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHL 135

Query: 3411 KAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREGYTD 3232
            + A+ P+KLV  KEE SEMGGYFI+NGLERVVRLLILPKRNYPMSMVR+SFR+RREGYTD
Sbjct: 136  RGAD-PQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 194

Query: 3231 KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVS 3052
            KAVVIRCVREDQSAV++KLYYL NGSARLGFWIQGREYLLPVG++LKAL +TTDHEIY S
Sbjct: 195  KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 254

Query: 3051 LTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGGLEK 2872
            LTCCY+EK++  KG+VGTQL+GER KIILDE+++LSL+TR QCLQHIGEHFQ +M GLE 
Sbjct: 255  LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 314

Query: 2871 ESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLP 2692
            ESYS+VADAVLR+YIFVHLD+N DKFNLLIFM+QKLFSL+DQTSVPDNPD LQNQEVLLP
Sbjct: 315  ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 374

Query: 2691 GHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAAIEN 2512
            GHLITIYLKEKLQ+WL + +R LQDE+ N+ K FE SSLA VKKV++K   RQI  A+EN
Sbjct: 375  GHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVKKVMDKNPSRQISLAVEN 433

Query: 2511 LLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKLLPE 2332
            +LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRF+SHFRAVHRGASFAGLRTTSVRKLLPE
Sbjct: 434  MLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 493

Query: 2331 SWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGMTPS 2152
            +WGFLCPVHTPDGEPCGLLNHM S+CRITSY+DS G  +DF ++R SIL VL+ +GMTP+
Sbjct: 494  AWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPA 553

Query: 2151 LPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYIPLS 1972
            LPKL QAGPPEVL V+LDGRVVGSI S  +E AV+HLRRLKVSA SVIP+DLEVGYIPLS
Sbjct: 554  LPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLS 613

Query: 1971 MGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGRKDV 1792
            MGGAYPGLYLFTS SRFVRPVRN+ IP EE ++IE IGPFEQVYMEI CPDG DGGR+++
Sbjct: 614  MGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNI 673

Query: 1791 FPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQKLYH 1612
            FPATH EIHPTG+LSVV +LTPWSDHNQSPRNMYQCQMGKQTM FS QAI+ RADQKLYH
Sbjct: 674  FPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYH 733

Query: 1611 LQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LQTPQTPIVRT  Y KY++D++P GTNAIVAVLA
Sbjct: 734  LQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLA 767



 Score =  633 bits (1633), Expect = 0.0
 Identities = 319/391 (81%), Positives = 346/391 (88%), Gaps = 2/391 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDL+++N KSDR QR F RSN+DK+++ LIDSDGLP+VGQ I PN+PYCSIY
Sbjct: 791  GQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIY 850

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS    TKLKGSEPV VDYVA+D K+KKH QK NIRFR PRNPIIGDKFSSRHGQKG
Sbjct: 851  NEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 910

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSGVTGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+LHG FVDATPF
Sbjct: 911  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 970

Query: 955  SSSMTKKS--AGSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 782
            S S+ K +  AGSES SSLVDELGSML + GFNYHGVEVLYSG YGTELTCEIFIGPVYY
Sbjct: 971  SDSLRKANGEAGSES-SSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYY 1029

Query: 781  QRLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLH 602
            QRLRHMVSDKFQVRSTG VDQVTRQPI       G+RFGEMERDS+LAHGAAYLLHDRLH
Sbjct: 1030 QRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLH 1089

Query: 601  TSSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMET 422
            T SDHHIADVCSLCGSILTTS+IQ  K+AVR++ G  LPP RAPKKVTC AC+TSKGMET
Sbjct: 1090 TCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGG--LPPGRAPKKVTCHACQTSKGMET 1147

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            V+MPY+FR+LAAELAAMNIKMTLQLSNGAGA
Sbjct: 1148 VSMPYIFRFLAAELAAMNIKMTLQLSNGAGA 1178


>ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis melo]
          Length = 1173

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 571/757 (75%), Positives = 667/757 (88%)
 Frame = -3

Query: 3780 EEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPP 3601
            E +DYEALRE+FRHHI+SFDH+V+ GLET++ +IKPVE++DSF+N KLRIW    E+YPP
Sbjct: 7    ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66

Query: 3600 QKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKL 3421
            QKER+ RT+ +AL P+ECRQAK++Y GKFM D+ FQY +  ++REK N GQFPIMLKSKL
Sbjct: 67   QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKL 126

Query: 3420 CHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREG 3241
            CHL+  + PKKLV + EE SEMGGYF+MNGLERVVRLLI PKRNYPMSMVR+SF +RREG
Sbjct: 127  CHLRGLD-PKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPMSMVRNSFSDRREG 185

Query: 3240 YTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEI 3061
            YTDKAVVIRCVREDQS+V++KLYYL NGSARLGFW+QG+EYLLP+G++LKAL +T DHEI
Sbjct: 186  YTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTNDHEI 245

Query: 3060 YVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGG 2881
            Y SLT CY++KH + KG+V TQL+GERAKIILDE+++L+L+ R QCL HIG+HFQP+M G
Sbjct: 246  YASLTSCYSDKHGKSKGAVATQLVGERAKIILDEVRDLALFDRRQCLDHIGQHFQPVMEG 305

Query: 2880 LEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEV 2701
            L KE +S VADAVL++YIFVHLD+N DKFNLLIFM QKLFSL+DQTSVPDNPDSLQNQ+V
Sbjct: 306  LGKEKFSTVADAVLKNYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV 365

Query: 2700 LLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAA 2521
            LLPG LIT+YLKEKL+DWL + K+ L+DE+ N SK FE  SLA VKKV++K   +QI +A
Sbjct: 366  LLPGQLITLYLKEKLEDWLQKSKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQISSA 425

Query: 2520 IENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKL 2341
            +EN+LKTGRLVTQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKL
Sbjct: 426  VENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKL 485

Query: 2340 LPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGM 2161
            LPESWGFLCPVHTPDGEPCGLLNH+TS+CRITSY++S+GKV+DF ++R SIL VL++VGM
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGM 545

Query: 2160 TPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYI 1981
             PSLPKL Q GPP+VL VLLDGR+VG I+S  +EK V+HLRRLKV +  VIP+DLEVGY+
Sbjct: 546  IPSLPKLVQMGPPDVLNVLLDGRLVGYISSNEVEKVVAHLRRLKVLSPHVIPDDLEVGYV 605

Query: 1980 PLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGR 1801
            PLS+ GAYPGLYLFTS SRFVRPV+NL I PE+++NIE IGPFEQV+MEI CPDGGDGGR
Sbjct: 606  PLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 1800 KDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQK 1621
            KD FPATH EIHPTG+LSVV NLTPWSDHNQSPRNMYQCQM KQTM FS QAI  RADQK
Sbjct: 666  KDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK 725

Query: 1620 LYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LYHLQTPQTPIVRT TY KYNID+YP GTNAIVAVLA
Sbjct: 726  LYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 762



 Score =  583 bits (1504), Expect = 0.0
 Identities = 289/389 (74%), Positives = 331/389 (85%), Gaps = 2/389 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDL++Q  +S R+Q+ F RSN+D +   +ID+DGLP+VGQ I P++PYCSIY
Sbjct: 786  GQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIY 845

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            +E      T KLKGSE V VDYV+VDVK+K + QK NIRFR PRNP+IGDKFSSRHGQKG
Sbjct: 846  DEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKG 905

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPF G TGMRPDLIINPHAFPSRMTIAML+ES+AAKGG L+G FV+ATPF
Sbjct: 906  VCSQLWPDIDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPF 965

Query: 955  SSSMTKKSA--GSESDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 782
             SS+ K +A  G  +  +LVDELGS L+ +GFNYHG+EVLYSGVYGTELTCEIFIGPVYY
Sbjct: 966  RSSVKKTNAGDGETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYY 1025

Query: 781  QRLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLH 602
            QRLRHMVSDK+QVRSTG VDQVTRQPI       G+RFGEMERDS+LAHGA+YLLHDRLH
Sbjct: 1026 QRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLH 1085

Query: 601  TSSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMET 422
            T SDHHIADVCSLCGSILT+S +Q  K+AVR++ G  LPP +APK+VTC ACKTSKGMET
Sbjct: 1086 TCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGG--LPPGKAPKRVTCHACKTSKGMET 1143

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQLSNGA 335
            VAMPYVF+YLAAELAAMNIKMTL+LSNGA
Sbjct: 1144 VAMPYVFKYLAAELAAMNIKMTLELSNGA 1172


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis
            sativus]
          Length = 1173

 Score = 1192 bits (3085), Expect = 0.0
 Identities = 569/757 (75%), Positives = 666/757 (87%)
 Frame = -3

Query: 3780 EEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPP 3601
            E +DYEALRE+FRHHI+SFDH+V+ GLET++ +IKPVE++DSF+N KLRIW    E+YPP
Sbjct: 7    ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66

Query: 3600 QKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKL 3421
            QKER+ RT+ +AL P+ECRQAK++Y GKFM D+ FQY +  ++REK N GQFPIMLKSKL
Sbjct: 67   QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKL 126

Query: 3420 CHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREG 3241
            CHL+  + PKKLV + EE SEMGGYF+MNGLERVVRLLI PKRNYP SMVR+SF +RREG
Sbjct: 127  CHLRGLD-PKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREG 185

Query: 3240 YTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEI 3061
            YTDKAVVIRCVREDQS+V++KLYYL NGSARLGFW+QG+EYLLP+G++LKAL +TTDHEI
Sbjct: 186  YTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI 245

Query: 3060 YVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGG 2881
            Y SLT CY++KH + KG+VGTQL+GERAKIILDE+++L+L+   QCL HIG+HFQP+M G
Sbjct: 246  YASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEG 305

Query: 2880 LEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEV 2701
            L KE +S VADAVL+DYIFVHLD+N DKFNLLIFM QKLFSL+DQTSVPDNPDSLQNQ+V
Sbjct: 306  LGKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV 365

Query: 2700 LLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAA 2521
            LLPG LIT+YLKEKL+DWL +VK+ L+DE+ N SK FE  SLA VKKV++K   +Q+ +A
Sbjct: 366  LLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSA 425

Query: 2520 IENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKL 2341
            +EN+LKTGRLVTQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKL
Sbjct: 426  VENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKL 485

Query: 2340 LPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGM 2161
            LPESWGFLCPVHTPDGEPCGLLNH+TS+CRITS+++S+GKV+DF ++R SIL VL++VGM
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGM 545

Query: 2160 TPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYI 1981
             PSLPKL Q G P+ L VLLDGR+VG I+S  +EK V+HLRRLKV +  VIP+DLEVGY+
Sbjct: 546  IPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYV 605

Query: 1980 PLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGR 1801
            PLS+ GAYPGLYLFTS SRFVRPV+NL I PE+++NIE IGPFEQV+MEI CPDGGDGGR
Sbjct: 606  PLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 1800 KDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQK 1621
            KD FPATH EIHPTG+LSVV NLTPWSDHNQSPRNMYQCQM KQTM FS QAI  RADQK
Sbjct: 666  KDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK 725

Query: 1620 LYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LYHLQTPQTPIVRT TY KYNID+YP GTNAIVAVLA
Sbjct: 726  LYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 762



 Score =  586 bits (1510), Expect = 0.0
 Identities = 289/389 (74%), Positives = 332/389 (85%), Gaps = 2/389 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDL++Q  +S R+Q+ F RSN+D +   +ID+DGLP+VGQ I P++PYCSIY
Sbjct: 786  GQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIY 845

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            +E      T KLKGSE V VDYV+VDVK+K + QK NIRFR PRNP+IGDKFSSRHGQKG
Sbjct: 846  DEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKG 905

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPF G TGMRPDLIINPHAFPSRMTIAML+ES+AAKGG L+G FV+ATPF
Sbjct: 906  VCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPF 965

Query: 955  SSSMTKKSAGSE--SDSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 782
             SS+ K +AG E  +  +LVDELGS L+ +GFNYHG+EVLYSGVYGTELTCEIFIGPVYY
Sbjct: 966  RSSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYY 1025

Query: 781  QRLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLH 602
            QRLRHMVSDK+QVRSTG VDQVTRQPI       G+RFGEMERDS+LAHGA+YLLHDRLH
Sbjct: 1026 QRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLH 1085

Query: 601  TSSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMET 422
            T SDHHIADVCSLCGS+LT+S +Q  K+AVR++ G  LPP +APK+VTC ACKTSKGMET
Sbjct: 1086 TCSDHHIADVCSLCGSVLTSSFVQPPKRAVREIGG--LPPGKAPKRVTCHACKTSKGMET 1143

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQLSNGA 335
            VAMPYVF+YLAAELAAMNIKMTLQLS+GA
Sbjct: 1144 VAMPYVFKYLAAELAAMNIKMTLQLSSGA 1172


>gb|KCW65882.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1082

 Score = 1181 bits (3054), Expect = 0.0
 Identities = 579/758 (76%), Positives = 659/758 (86%)
 Frame = -3

Query: 3783 AEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYP 3604
            A+  DY ALRE+FRHHI+SFDH+V+ GLETML  IKPV++FD  S+  L+IWF   E+Y 
Sbjct: 6    ADAADYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEVYQ 65

Query: 3603 PQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSK 3424
            PQKE SS+T  DAL PFECRQAK +YAGKF+V + FQY D V V EK N G  PIMLKSK
Sbjct: 66   PQKEGSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPIMLKSK 125

Query: 3423 LCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERRE 3244
            LC+L  A+ P+KLV  KEE SEMGGYFI+NGLERVVRLLILPKRNYPMSMVR+SFR+RRE
Sbjct: 126  LCYLNGAD-PQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRRE 184

Query: 3243 GYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHE 3064
            GYTDKAVVIRCVREDQS+V++KLYYL NGSARLGFWIQ REYLLPVG++LKAL +T DHE
Sbjct: 185  GYTDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDTNDHE 244

Query: 3063 IYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMG 2884
            IY SLT CY+EK+ R KG VG QL+ ERAKIILDEL++L+L+TR QCLQHIGEHFQP+M 
Sbjct: 245  IYSSLTSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQPVMD 304

Query: 2883 GLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQE 2704
            GLE ES+  VA+AVL+DYIFVHL++N DKFNLLIFM+QKLFSL+DQTS PDNPDSLQNQE
Sbjct: 305  GLENESFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSLQNQE 364

Query: 2703 VLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGA 2524
            VLLPGHLITIYLK+KL+DWL + K+ LQDE+ N++K F+ SSLA VKKV++K   RQIG+
Sbjct: 365  VLLPGHLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGRQIGS 424

Query: 2523 AIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRK 2344
            AIEN+LKTGRLVTQSGLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTTSVRK
Sbjct: 425  AIENMLKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRK 484

Query: 2343 LLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVG 2164
            LLPESWGFLCPVHTPDGEPCGLLNHMT +CRITS++DS+G  +DF+++R SIL VL+ +G
Sbjct: 485  LLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVLIGIG 544

Query: 2163 MTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGY 1984
            MTPSLPK+ QAGPP+VL VLLDGRVVGSI S  +EKAVS+LRRLK+S TS IP+DLEVGY
Sbjct: 545  MTPSLPKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDLEVGY 604

Query: 1983 IPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGG 1804
            +PLS GGAYPGLYLFT+ SRF RPVRN+  P + S NIE IGPFEQV+MEI CPDGGDGG
Sbjct: 605  VPLSFGGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIELIGPFEQVFMEIRCPDGGDGG 664

Query: 1803 RKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQ 1624
            R++ FPATH EIHPTG+LSVV NLTPWSDHNQSPRNMYQCQM KQTM FS QAIH RADQ
Sbjct: 665  RRNEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHFRADQ 724

Query: 1623 KLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            KLYHLQTPQTPIVRT  Y KY ID++P GTNAIVAVLA
Sbjct: 725  KLYHLQTPQTPIVRTGAYTKYCIDEFPTGTNAIVAVLA 762



 Score =  393 bits (1009), Expect = e-113
 Identities = 195/255 (76%), Positives = 215/255 (84%), Gaps = 2/255 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDL+EQ+ KSDR QR F RSN DK++H  IDSDGLP+VGQ I PN+PYCS+Y
Sbjct: 786  GQIYQTETIDLSEQSSKSDREQRMFRRSNTDKSAHPWIDSDGLPYVGQMIRPNEPYCSVY 845

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE T+       KGSE   VDYVAVD K+KK +QKANIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 846  NEVTTTTKNHLRKGSESAIVDYVAVDTKTKKGLQKANIRFRHPRNPVIGDKFSSRHGQKG 905

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSG+TGMRPDLIINPHAFPSRMTIAMLLESIAAK G+L G FVDATPF
Sbjct: 906  VCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEFVDATPF 965

Query: 955  SSSMTKKSAGSESDSS--LVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 782
            +SS TKK+ G E   S  LVD++G+ L  +GFNYHGVEVLYSGVYGTELTCEIFIGPVYY
Sbjct: 966  ASS-TKKANGEEKSESELLVDQIGAKLRKKGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 1024

Query: 781  QRLRHMVSDKFQVRS 737
            QRLRHMVSDKFQ  S
Sbjct: 1025 QRLRHMVSDKFQASS 1039


>ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
            isoform X1 [Eucalyptus grandis]
            gi|629100116|gb|KCW65881.1| hypothetical protein
            EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1173

 Score = 1181 bits (3054), Expect = 0.0
 Identities = 579/758 (76%), Positives = 659/758 (86%)
 Frame = -3

Query: 3783 AEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYP 3604
            A+  DY ALRE+FRHHI+SFDH+V+ GLETML  IKPV++FD  S+  L+IWF   E+Y 
Sbjct: 6    ADAADYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEVYQ 65

Query: 3603 PQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSK 3424
            PQKE SS+T  DAL PFECRQAK +YAGKF+V + FQY D V V EK N G  PIMLKSK
Sbjct: 66   PQKEGSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPIMLKSK 125

Query: 3423 LCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERRE 3244
            LC+L  A+ P+KLV  KEE SEMGGYFI+NGLERVVRLLILPKRNYPMSMVR+SFR+RRE
Sbjct: 126  LCYLNGAD-PQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRRE 184

Query: 3243 GYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHE 3064
            GYTDKAVVIRCVREDQS+V++KLYYL NGSARLGFWIQ REYLLPVG++LKAL +T DHE
Sbjct: 185  GYTDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDTNDHE 244

Query: 3063 IYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMG 2884
            IY SLT CY+EK+ R KG VG QL+ ERAKIILDEL++L+L+TR QCLQHIGEHFQP+M 
Sbjct: 245  IYSSLTSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQPVMD 304

Query: 2883 GLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQE 2704
            GLE ES+  VA+AVL+DYIFVHL++N DKFNLLIFM+QKLFSL+DQTS PDNPDSLQNQE
Sbjct: 305  GLENESFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSLQNQE 364

Query: 2703 VLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGA 2524
            VLLPGHLITIYLK+KL+DWL + K+ LQDE+ N++K F+ SSLA VKKV++K   RQIG+
Sbjct: 365  VLLPGHLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGRQIGS 424

Query: 2523 AIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRK 2344
            AIEN+LKTGRLVTQSGLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTTSVRK
Sbjct: 425  AIENMLKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRK 484

Query: 2343 LLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVG 2164
            LLPESWGFLCPVHTPDGEPCGLLNHMT +CRITS++DS+G  +DF+++R SIL VL+ +G
Sbjct: 485  LLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVLIGIG 544

Query: 2163 MTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGY 1984
            MTPSLPK+ QAGPP+VL VLLDGRVVGSI S  +EKAVS+LRRLK+S TS IP+DLEVGY
Sbjct: 545  MTPSLPKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDLEVGY 604

Query: 1983 IPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGG 1804
            +PLS GGAYPGLYLFT+ SRF RPVRN+  P + S NIE IGPFEQV+MEI CPDGGDGG
Sbjct: 605  VPLSFGGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIELIGPFEQVFMEIRCPDGGDGG 664

Query: 1803 RKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQ 1624
            R++ FPATH EIHPTG+LSVV NLTPWSDHNQSPRNMYQCQM KQTM FS QAIH RADQ
Sbjct: 665  RRNEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHFRADQ 724

Query: 1623 KLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            KLYHLQTPQTPIVRT  Y KY ID++P GTNAIVAVLA
Sbjct: 725  KLYHLQTPQTPIVRTGAYTKYCIDEFPTGTNAIVAVLA 762



 Score =  600 bits (1546), Expect = 0.0
 Identities = 302/391 (77%), Positives = 333/391 (85%), Gaps = 2/391 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDL+EQ+ KSDR QR F RSN DK++H  IDSDGLP+VGQ I PN+PYCS+Y
Sbjct: 786  GQIYQTETIDLSEQSSKSDREQRMFRRSNTDKSAHPWIDSDGLPYVGQMIRPNEPYCSVY 845

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE T+       KGSE   VDYVAVD K+KK +QKANIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 846  NEVTTTTKNHLRKGSESAIVDYVAVDTKTKKGLQKANIRFRHPRNPVIGDKFSSRHGQKG 905

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSG+TGMRPDLIINPHAFPSRMTIAMLLESIAAK G+L G FVDATPF
Sbjct: 906  VCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEFVDATPF 965

Query: 955  SSSMTKKSAGSESDSS--LVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 782
            +SS TKK+ G E   S  LVD++G+ L  +GFNYHGVEVLYSGVYGTELTCEIFIGPVYY
Sbjct: 966  ASS-TKKANGEEKSESELLVDQIGAKLRKKGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 1024

Query: 781  QRLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLH 602
            QRLRHMVSDKFQVRSTG VDQVTRQPI       G+RFGEMERDS++AHGAAYLLHDRLH
Sbjct: 1025 QRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMVAHGAAYLLHDRLH 1084

Query: 601  TSSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMET 422
            T SD+HIADVCSLCGSILTT  +Q  ++  R++ G  LPPIRAPKKVTC AC+TS+GMET
Sbjct: 1085 TCSDYHIADVCSLCGSILTTQFVQPQRRPGREIGG--LPPIRAPKKVTCHACQTSRGMET 1142

Query: 421  VAMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            VAMPYVFRYLAAELAAMNIKMTL LSNGAGA
Sbjct: 1143 VAMPYVFRYLAAELAAMNIKMTLHLSNGAGA 1173


>ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nelumbo
            nucifera]
          Length = 1350

 Score = 1179 bits (3050), Expect = 0.0
 Identities = 571/754 (75%), Positives = 665/754 (88%)
 Frame = -3

Query: 3771 DYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPPQKE 3592
            DYE+LRE+F+ HIDSFD+ V+ GLETML++IKPVE+ DSF+  KLRIWF  +E+YPPQKE
Sbjct: 10   DYESLRELFKPHIDSFDYFVDAGLETMLMHIKPVEIVDSFTKTKLRIWFGKSELYPPQKE 69

Query: 3591 RSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKLCHL 3412
            R S+++ D L PFECRQA ++Y+GKFMVD+ FQY +GV+VREK   GQ PIMLKSK+CHL
Sbjct: 70   RISKSIRDPLLPFECRQAGISYSGKFMVDVCFQYNNGVVVREKFGFGQLPIMLKSKVCHL 129

Query: 3411 KAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREGYTD 3232
            + A+ P+KLV +KEE +EMGGYFI+NGLER+VRLLI+PKRNYPMSMVR+SFRERREGYTD
Sbjct: 130  RGAD-PQKLVSYKEEATEMGGYFILNGLERLVRLLIMPKRNYPMSMVRNSFRERREGYTD 188

Query: 3231 KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVS 3052
            KAVVIRCVREDQSAV++KLY+L NGSARLGFWI+G+EYLLPVGI+LKAL +T+DHEIYVS
Sbjct: 189  KAVVIRCVREDQSAVTVKLYHLQNGSARLGFWIRGKEYLLPVGIVLKALIDTSDHEIYVS 248

Query: 3051 LTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGGLEK 2872
            LTC ++E + + KG+VGTQL+GER KIILDE+++LSL+T  QC+QHIGE+FQ +M GLE 
Sbjct: 249  LTC-HSEVNQKAKGTVGTQLVGERVKIILDEVRDLSLFTHLQCIQHIGEYFQAIMDGLET 307

Query: 2871 ESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLP 2692
            ES+SVV + VL+DYIFVHLD+N DKFNLLIFMLQKLFSLVDQT+VPDNPD+LQNQEVLLP
Sbjct: 308  ESHSVVGEVVLKDYIFVHLDNNHDKFNLLIFMLQKLFSLVDQTTVPDNPDTLQNQEVLLP 367

Query: 2691 GHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAAIEN 2512
            GHLITIYLKEKLQDWLL+ +R L DE+ N+ K  E  SLA VKKV++K SP+ IG A+EN
Sbjct: 368  GHLITIYLKEKLQDWLLKGRRLLYDEIKNKGKSSEFLSLAHVKKVLDKNSPKSIGLALEN 427

Query: 2511 LLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKLLPE 2332
            +LKTGRLVTQ+GLDLQQ+ GM+VQAERLNFLRF+SHFRAVHRGASFAGLRTTSVRKLLPE
Sbjct: 428  MLKTGRLVTQTGLDLQQKEGMSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 487

Query: 2331 SWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGMTPS 2152
            +WGFLCPVHTPDGEPCGLLNH+TS+CRITSY+DS G VKDF ++R SIL VL+ VGM PS
Sbjct: 488  TWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSHGNVKDFFKIRMSILSVLIGVGMMPS 547

Query: 2151 LPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYIPLS 1972
            LPKL +AGPPEVL VLLDGRVVGSI+S  +E AV+HLRRLK+SA S IP DLEVGY+PL+
Sbjct: 548  LPKLVRAGPPEVLSVLLDGRVVGSISSTEVENAVAHLRRLKLSACSGIPNDLEVGYVPLT 607

Query: 1971 MGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGRKDV 1792
            MGGAYPGLYLFTS SRF RPVRN+ +  EE  +IE IGPFEQVYMEI C DGG+GGR+ +
Sbjct: 608  MGGAYPGLYLFTSPSRFARPVRNISVSSEEGQDIELIGPFEQVYMEIRCADGGNGGRRSI 667

Query: 1791 FPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQKLYH 1612
            FPATH EIHPTGILSVV NLTPWSDHNQSPRNMYQCQM KQTM FS Q+I  RADQKLYH
Sbjct: 668  FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQSIRFRADQKLYH 727

Query: 1611 LQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LQTPQTPIVRT  Y KY+ID++P GTNAIVAVLA
Sbjct: 728  LQTPQTPIVRTSAYTKYSIDEFPTGTNAIVAVLA 761



 Score =  590 bits (1520), Expect = 0.0
 Identities = 300/386 (77%), Positives = 329/386 (85%), Gaps = 2/386 (0%)
 Frame = -2

Query: 1480 TESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIYNEFTS 1301
            TE+IDL +Q+ KSD   + F RSN+DK++H LIDSDGLP+VGQ++ P++PYCSIYN  T 
Sbjct: 967  TETIDLADQSGKSDEDLKLFARSNVDKSTHSLIDSDGLPYVGQKVHPDEPYCSIYNTVTG 1026

Query: 1300 RVTTTKLKGSEPVYVDYVAVDV-KSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKGVCSQ 1124
                TKLKGSEPV VDYVAVDV K KK +QK NIRFR PRNPIIGDKFSSRHGQKGVCSQ
Sbjct: 1027 TTKATKLKGSEPVIVDYVAVDVRKPKKPMQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQ 1086

Query: 1123 LWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPFSSSM 944
            LWPD DMPFSGVTGM+PDLIINPHAFPSRMTI MLLESIAAKGG+LHG F++ATPF+SS+
Sbjct: 1087 LWPDIDMPFSGVTGMQPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFINATPFASSV 1146

Query: 943  TKKSAGSES-DSSLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRH 767
             +    S S  SSLVDELGSML + GFNYHGVEVLYSGV GTELTCEIFIGPVYYQRLRH
Sbjct: 1147 EEDDKKSSSKSSSLVDELGSMLTSYGFNYHGVEVLYSGVLGTELTCEIFIGPVYYQRLRH 1206

Query: 766  MVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHTSSDH 587
            MVSDKFQVRSTG +DQVTRQPI       G+RFGEMERDS+LAHGAAYLLHDRLHT SD+
Sbjct: 1207 MVSDKFQVRSTGTLDQVTRQPIKGRKRGGGIRFGEMERDSILAHGAAYLLHDRLHTCSDY 1266

Query: 586  HIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETVAMPY 407
            HIADVCSLCGSILTTS IQ  K+AVR+  G  LPP R PKKVTC ACKTSKGMETVAMPY
Sbjct: 1267 HIADVCSLCGSILTTSFIQPQKRAVREFGG--LPPGRIPKKVTCHACKTSKGMETVAMPY 1324

Query: 406  VFRYLAAELAAMNIKMTLQLSNGAGA 329
            VFRYLAAELAAMNIK+TLQLS+G  A
Sbjct: 1325 VFRYLAAELAAMNIKLTLQLSSGTEA 1350



 Score =  265 bits (676), Expect = 1e-68
 Identities = 142/239 (59%), Positives = 170/239 (71%), Gaps = 14/239 (5%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            GYIYQTE+IDL +Q+ KSD   + F RSN+DK++H LIDSDGLP+VGQ++ P++PYCSIY
Sbjct: 785  GYIYQTETIDLADQSGKSDEDLKLFARSNVDKSTHSLIDSDGLPYVGQKVHPDEPYCSIY 844

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDV-KSKKHIQKANIRFRHPRNPIIGDKFSSRHGQK 1139
            N  T     TKLKGSEPV VDYVAVDV K KK +QK NIRFR PRNPIIGDKFSSRHGQK
Sbjct: 845  NTVTGTTKATKLKGSEPVIVDYVAVDVRKPKKPMQKVNIRFRRPRNPIIGDKFSSRHGQK 904

Query: 1138 GVCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALH---GNFVD 968
            GVCSQLWPD DMPFSGVTGM+PDLIINPHAFPSRMTI MLLESIAAK    +   G++  
Sbjct: 905  GVCSQLWPDIDMPFSGVTGMQPDLIINPHAFPSRMTIGMLLESIAAKVPPFNHQLGDYCW 964

Query: 967  ATPFSSSMTKKSAGSESD------SSLVDELGSMLVARGFNYHGVEV----LYSGVYGT 821
                +  +  +S  S+ D      S++     S++ + G  Y G +V     Y  +Y T
Sbjct: 965  EMTETIDLADQSGKSDEDLKLFARSNVDKSTHSLIDSDGLPYVGQKVHPDEPYCSIYNT 1023


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit 2-like isoform X4
            [Glycine max] gi|947071775|gb|KRH20666.1| hypothetical
            protein GLYMA_13G192600 [Glycine max]
          Length = 1175

 Score = 1177 bits (3045), Expect = 0.0
 Identities = 567/754 (75%), Positives = 662/754 (87%)
 Frame = -3

Query: 3771 DYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPPQKE 3592
            D+EALRE+F+HHI+SFD+MV+ GL+TML +IKPVEVFD F++ KLRIW +N  +YPPQKE
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 3591 RSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKLCHL 3412
            R SRTM +AL PFECRQAK++Y+GK  +D+ FQY DG I+RE VN GQFPIML+SKLC+L
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNL 129

Query: 3411 KAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREGYTD 3232
            + A+ P+KLV +KEE SEMGGYFI+NGLERVVRLLILPKRNYPMSMVR+SF +RREGYTD
Sbjct: 130  RGAD-PQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188

Query: 3231 KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVS 3052
            KAVVIRCVR DQS++S++LYYL NGSARLGFW++GREYLLPVGIILKAL +TTD EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 3051 LTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGGLEK 2872
            LT CYNEK+++ KG+VGTQL+GERAKIILDEL++LSL+TR QCL++IGEHFQP+M  L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308

Query: 2871 ESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLP 2692
            +SY +VADAVL+D I VHLD+N DKFNLLIFMLQKLFSL+DQTSVPDNPDSLQN EVLLP
Sbjct: 309  DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2691 GHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAAIEN 2512
            GHLIT+YLKEKL+DWL + +R L DE+D +SKKF+ S +  VKKV++K SP+Q+  A+EN
Sbjct: 369  GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2511 LLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKLLPE 2332
            +LKTGRLVTQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2331 SWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGMTPS 2152
            SWGFLCPVHTPDGEPCGLLNHMT + RITS++DS+G +KD+ +++ SIL VL+ VGMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548

Query: 2151 LPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYIPLS 1972
            LPK+   GPPE L VLLDG VVG IAS  +EK V+H+R LKVS+ +VIP+D+EVGY+PLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608

Query: 1971 MGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGRKDV 1792
            MGGAYPGLYL TS SRFVRPVRN+ I  + S NIE IGPFEQV+MEI CPDGGDGGRK  
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1791 FPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQKLYH 1612
            FPATH EIHPT +LSVV NLTPWSDHNQSPRNMYQCQM KQTM FS Q I  RADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1611 LQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LQTPQTPIVRT TY KYNID++P GTNAIVAVLA
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLA 762



 Score =  611 bits (1575), Expect = 0.0
 Identities = 305/389 (78%), Positives = 338/389 (86%), Gaps = 1/389 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDLTEQ  +SDR+ R F +SN++K++   IDSDGLPHVGQ I P++PYCSIY
Sbjct: 786  GQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIY 845

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS + T K KGSE VYVDYVA DVK+KKH+QK NIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 846  NEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKG 905

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+L G FVDATPF
Sbjct: 906  VCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF 965

Query: 955  SSSMTKKSAGSESDS-SLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
             SS+TK S  S+S S SLVD+LG +L  +GFNYHG+EVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 966  RSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQ 1025

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDKFQVRSTG +DQVTRQPI       G+RFGEMERDSLLAHGAAYLLHDRLHT
Sbjct: 1026 RLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHT 1085

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETV 419
             SD+HIADVCSLCGS+L T+ IQ  K+ VR++ G  LPP RAPKKVTC AC+TSKGMETV
Sbjct: 1086 CSDYHIADVCSLCGSMLATTFIQPQKRPVREIGG--LPPGRAPKKVTCHACQTSKGMETV 1143

Query: 418  AMPYVFRYLAAELAAMNIKMTLQLSNGAG 332
            AMPYVFRYLAAELAAMNIKMTL+LS+GAG
Sbjct: 1144 AMPYVFRYLAAELAAMNIKMTLKLSDGAG 1172


>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit 2-like isoform X1
            [Glycine max] gi|947055288|gb|KRH04741.1| hypothetical
            protein GLYMA_17G183400 [Glycine max]
          Length = 1175

 Score = 1174 bits (3036), Expect = 0.0
 Identities = 563/754 (74%), Positives = 660/754 (87%)
 Frame = -3

Query: 3771 DYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPPQKE 3592
            D+EALRE+F+HHI+SFD+M + GLETML +IKP+EVFD F++ KLRIW +N  +YPPQKE
Sbjct: 10   DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 3591 RSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKLCHL 3412
            R SRTM +AL PFECRQAK++YAGK  +D+ FQY DG I+RE +N GQFPIML+SKLC+L
Sbjct: 70   RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNL 129

Query: 3411 KAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREGYTD 3232
            + A+ P+KLV ++EE SEMGGYFI+NGLERV+RLLILPKRN+PMSMVR+SF +RREGYTD
Sbjct: 130  RGAD-PQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188

Query: 3231 KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVS 3052
            KA+VIRCVR DQS++S++LYYL NGSARLGFW++GREYLLPVGIILKAL +TTD EIYV+
Sbjct: 189  KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 3051 LTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGGLEK 2872
            LT CYNEK+++ KG+VGTQL+GERAKIILDEL++LSL+TR QCL++IGEHFQP++  L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308

Query: 2871 ESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLP 2692
            +SY +VA+AVL+D I VHLD+N DKFNLLIFMLQKLFSL+DQTSVPDNPDSLQN EVLLP
Sbjct: 309  DSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2691 GHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAAIEN 2512
            GHLIT+YLKEKL+DWL + KR L DE+D +SKKF+ S +  VKKV++K SP+Q+  A+EN
Sbjct: 369  GHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2511 LLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKLLPE 2332
            +LKTGRLVTQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2331 SWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGMTPS 2152
            SWGFLCPVHTPDGEPCGLLNHMT + RITS++DS+G VKD+ +++ SIL VL+ VGMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPS 548

Query: 2151 LPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYIPLS 1972
            LPK+   GPPE L VLLDG VVG IAS   EK V+H+R LKVS+ +VIP+D+EVGY+PLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLS 608

Query: 1971 MGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGRKDV 1792
            MGGAYPGLYL TS SRFVRPVRN+ IP   S NIE IGPFEQV+MEI CPDGGDGGRK  
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1791 FPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQKLYH 1612
            FPATH EIHPT +LSVV NLTPWSDHNQSPRNMYQCQM KQTM FS Q I  RADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1611 LQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LQTPQTPIVRT TY KYNID++P GTNAIVAVLA
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLA 762



 Score =  607 bits (1566), Expect = 0.0
 Identities = 305/390 (78%), Positives = 338/390 (86%), Gaps = 1/390 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDLTEQ  + DR+ R F +SNL+K++   IDSDGLPHVGQ I P++PYCSIY
Sbjct: 786  GQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIY 845

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS + T K KGSE VYVDYVAVDVK+KKH+QK NIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 846  NEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKG 905

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+L G FVDATPF
Sbjct: 906  VCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF 965

Query: 955  SSSMTKKSAGSESDS-SLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
             SS+ K S  S+S S S+VD+LG +L  +GFNYHG+EVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 966  RSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQ 1025

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDKFQVRSTG +DQVTRQPI       G+RFGEMERDSLLAHGAAYLLHDRLHT
Sbjct: 1026 RLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHT 1085

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETV 419
             SD+HIADVCSLCGS+LTT+  Q  K+ VR++ G  LPP RAPKKVTC AC+TSKGMETV
Sbjct: 1086 CSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGG--LPPGRAPKKVTCHACQTSKGMETV 1143

Query: 418  AMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            AMPYVFRYLAAELAAMNIKMTL+LS+GAGA
Sbjct: 1144 AMPYVFRYLAAELAAMNIKMTLKLSDGAGA 1173


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1172 bits (3031), Expect = 0.0
 Identities = 563/769 (73%), Positives = 665/769 (86%)
 Frame = -3

Query: 3816 EVQKKKCRPHLAEEKDYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKL 3637
            E Q++K     ++ ++ E L+E+F+HHI+SFD+M++ GL+ ML  +KPV++FDS SN  L
Sbjct: 2    ERQRRKRPGPFSDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTL 61

Query: 3636 RIWFENNEIYPPQKERSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVN 3457
            RIW ++ E+YPPQK+RSS+T A ALYPFECRQAK++Y G F +D+ FQ+  GV+VREK+N
Sbjct: 62   RIWLDHPEVYPPQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLN 121

Query: 3456 LGQFPIMLKSKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMS 3277
             G+FPIMLKSK C+L+ A+ P+KLV  KEE  EMGGYFI+NGLERVVRLLILPKRNYPMS
Sbjct: 122  FGEFPIMLKSKRCYLREAD-PRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMS 180

Query: 3276 MVRSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGII 3097
            +VR+SFR+RREGYTDKAVVIRCVR D S+V++KLYYL+NGSARLGFW+QGREY+LPVGII
Sbjct: 181  LVRNSFRDRREGYTDKAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGII 240

Query: 3096 LKALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQ 2917
            LKAL +T D EIY  LTCCYNEK+   KG+VGTQL+GERAKIILDE+Q+L+L+T+ QCLQ
Sbjct: 241  LKALIDTNDREIYTKLTCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQ 300

Query: 2916 HIGEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSV 2737
            HIGEHFQP+M G+E ESYS VAD VLR+YIFVHLDDN DKFNLLIFM+QKLFSL+DQTS 
Sbjct: 301  HIGEHFQPIMEGMESESYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSA 360

Query: 2736 PDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKV 2557
            PDN DSLQNQEVLLPGHLITIYLKEKL+DWL + K+ ++D ++N+SK F+  S+ DVKKV
Sbjct: 361  PDNSDSLQNQEVLLPGHLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKV 420

Query: 2556 IEKTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGAS 2377
            +EK  P Q+ AAIENLLKTGRL+TQ+GLDLQQRAG TVQAERLN+ RF+S FR VHRGAS
Sbjct: 421  MEKNRPTQVSAAIENLLKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGAS 480

Query: 2376 FAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVR 2197
            FAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT +CRITSYY+S G ++DF ++R
Sbjct: 481  FAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIR 540

Query: 2196 KSILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSAT 2017
             SIL VLV VGMT S PK++ AGPP+VLPVLLDGRVVGS+ S   EK V+HLRRLK++A 
Sbjct: 541  MSILDVLVGVGMTTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAA 600

Query: 2016 SVIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYM 1837
            SVIP+DLEVGY+PLS+GG YPGLYLFTS SRFVRPVRN+ IP  +  +IE IGPFEQV+M
Sbjct: 601  SVIPDDLEVGYVPLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFM 660

Query: 1836 EISCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGF 1657
            EI CPDGG+GGR ++FPATH EI PT +LSVV NLTPWSDHNQSPRNMYQCQM KQTM F
Sbjct: 661  EIRCPDGGNGGRSNIFPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAF 720

Query: 1656 SCQAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            S QAI++RADQKLYHLQTPQTPIVRTKTY KY +D+YP GTNAIVAVLA
Sbjct: 721  SLQAINARADQKLYHLQTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLA 769



 Score =  600 bits (1547), Expect = 0.0
 Identities = 299/390 (76%), Positives = 334/390 (85%), Gaps = 1/390 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDL +   KSDR QR F R + D++    +DSDGLPHVGQ I PN+PYCS  
Sbjct: 793  GQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTI 852

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            N+ T+       KGSE V VDYVAVD KSKKH+QKANIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 853  NQVTNSKRLYNHKGSETVIVDYVAVDTKSKKHLQKANIRFRHPRNPVIGDKFSSRHGQKG 912

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSGVTGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+LHG FVDATPF
Sbjct: 913  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 972

Query: 955  SSSMTKKSAGSESDS-SLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
            S S+ +    +E++S SLVDELGSML ARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 973  SDSVKEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1032

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDK+QVR+TG+VDQ+TRQPI       G+RFGEMERD++LAHGAAYLLHDRLHT
Sbjct: 1033 RLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHT 1092

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETV 419
             SD+HIADVCSLCGSILTTS++Q  K+ VR++ G  LPP RAPKKVTC AC+TSKGMETV
Sbjct: 1093 CSDYHIADVCSLCGSILTTSIVQPPKRVVREIGG--LPPARAPKKVTCHACQTSKGMETV 1150

Query: 418  AMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            AMPYVFRYLAAELAAMNI MT+QL++GAGA
Sbjct: 1151 AMPYVFRYLAAELAAMNITMTIQLNSGAGA 1180


>gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
          Length = 1175

 Score = 1170 bits (3028), Expect = 0.0
 Identities = 562/754 (74%), Positives = 659/754 (87%)
 Frame = -3

Query: 3771 DYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPPQKE 3592
            D+EALRE+F+HHI+SFD+M + GLETML +IKP+EVFD F++ KLRIW +N  +YPPQKE
Sbjct: 10   DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 3591 RSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLKSKLCHL 3412
            R SRTM +AL PFECRQAK++YAGK  +D+ FQY DG I+RE +N GQFPIML+SKLC+L
Sbjct: 70   RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNL 129

Query: 3411 KAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMVRSSFRERREGYTD 3232
            + A+ P+KLV ++EE SEMGGYFI+NGLERV+RLLILPKRN+PMSMVR+SF +RREGYTD
Sbjct: 130  RGAD-PQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188

Query: 3231 KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVS 3052
            KA+VIRCVR DQS++S++LYYL NGSARLGFW++GREYLLPVGIILKAL +TTD EIYV+
Sbjct: 189  KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 3051 LTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMGGLEK 2872
            LT CYNEK+++ KG+VGTQL+GERAKIILDEL++LSL+TR QCL++IGEHFQP++  L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308

Query: 2871 ESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLP 2692
            +SY +VA+AVL+D I VHLD+N DKFNLLIFMLQKLFSL+DQTSVPDNPDSLQN EVLLP
Sbjct: 309  DSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2691 GHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIEKTSPRQIGAAIEN 2512
            GHLIT+YLKEKL+DWL + KR L DE+D +SKKF+ S +  VKKV++K SP+Q+  A+EN
Sbjct: 369  GHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2511 LLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFAGLRTTSVRKLLPE 2332
            +LKTGRLVTQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2331 SWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKSILKVLVSVGMTPS 2152
            SWGFLCPVHTPDGEPCGLLNHMT + RITS++DS+G VKD+ +++ SIL VL+ VGMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPS 548

Query: 2151 LPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSVIPEDLEVGYIPLS 1972
            LPK+   GPPE L VLLDG VVG IAS   EK V+H+R LKVS+ +VIP+D+EVGY+PLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLS 608

Query: 1971 MGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEISCPDGGDGGRKDV 1792
            MGGAYPGLYL TS SRFVRPVRN+ IP   S NIE IGPFEQV+MEI CPDGGDGGRK  
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1791 FPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAIHSRADQKLYH 1612
            FPATH EIHPT +LSVV NLTPWSD NQSPRNMYQCQM KQTM FS Q I  RADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDQNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1611 LQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            LQTPQTPIVRT TY KYNID++P GTNAIVAVLA
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLA 762



 Score =  607 bits (1566), Expect = 0.0
 Identities = 305/390 (78%), Positives = 338/390 (86%), Gaps = 1/390 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDLTEQ  + DR+ R F +SNL+K++   IDSDGLPHVGQ I P++PYCSIY
Sbjct: 786  GQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIY 845

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS + T K KGSE VYVDYVAVDVK+KKH+QK NIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 846  NEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKG 905

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+L G FVDATPF
Sbjct: 906  VCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF 965

Query: 955  SSSMTKKSAGSESDS-SLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
             SS+ K S  S+S S S+VD+LG +L  +GFNYHG+EVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 966  RSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQ 1025

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDKFQVRSTG +DQVTRQPI       G+RFGEMERDSLLAHGAAYLLHDRLHT
Sbjct: 1026 RLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHT 1085

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETV 419
             SD+HIADVCSLCGS+LTT+  Q  K+ VR++ G  LPP RAPKKVTC AC+TSKGMETV
Sbjct: 1086 CSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGG--LPPGRAPKKVTCHACQTSKGMETV 1143

Query: 418  AMPYVFRYLAAELAAMNIKMTLQLSNGAGA 329
            AMPYVFRYLAAELAAMNIKMTL+LS+GAGA
Sbjct: 1144 AMPYVFRYLAAELAAMNIKMTLKLSDGAGA 1173


>ref|XP_014621158.1| PREDICTED: DNA-directed RNA polymerase I subunit 2-like isoform X3
            [Glycine max]
          Length = 1188

 Score = 1168 bits (3021), Expect = 0.0
 Identities = 567/767 (73%), Positives = 662/767 (86%), Gaps = 13/767 (1%)
 Frame = -3

Query: 3771 DYEALREIFRHHIDSFDHMVEYGLETMLLNIKPVEVFDSFSNLKLRIWFENNEIYPPQKE 3592
            D+EALRE+F+HHI+SFD+MV+ GL+TML +IKPVEVFD F++ KLRIW +N  +YPPQKE
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 3591 RSSRTMADALYPFECRQAKLTYAGKFMVDIKFQYGDGVIVREKVNLGQFPIMLK------ 3430
            R SRTM +AL PFECRQAK++Y+GK  +D+ FQY DG I+RE VN GQFPIML+      
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQLCRLFY 129

Query: 3429 -------SKLCHLKAANTPKKLVLHKEEPSEMGGYFIMNGLERVVRLLILPKRNYPMSMV 3271
                   SKLC+L+ A+ P+KLV +KEE SEMGGYFI+NGLERVVRLLILPKRNYPMSMV
Sbjct: 130  LSPGLMQSKLCNLRGAD-PQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMV 188

Query: 3270 RSSFRERREGYTDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILK 3091
            R+SF +RREGYTDKAVVIRCVR DQS++S++LYYL NGSARLGFW++GREYLLPVGIILK
Sbjct: 189  RNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILK 248

Query: 3090 ALTETTDHEIYVSLTCCYNEKHDRVKGSVGTQLLGERAKIILDELQNLSLYTRAQCLQHI 2911
            AL +TTD EIYV+LT CYNEK+++ KG+VGTQL+GERAKIILDEL++LSL+TR QCL++I
Sbjct: 249  ALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYI 308

Query: 2910 GEHFQPLMGGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPD 2731
            GEHFQP+M  L+ +SY +VADAVL+D I VHLD+N DKFNLLIFMLQKLFSL+DQTSVPD
Sbjct: 309  GEHFQPVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPD 368

Query: 2730 NPDSLQNQEVLLPGHLITIYLKEKLQDWLLRVKRALQDEVDNRSKKFELSSLADVKKVIE 2551
            NPDSLQN EVLLPGHLIT+YLKEKL+DWL + +R L DE+D +SKKF+ S +  VKKV++
Sbjct: 369  NPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMD 428

Query: 2550 KTSPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFA 2371
            K SP+Q+  A+EN+LKTGRLVTQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFA
Sbjct: 429  KNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFA 488

Query: 2370 GLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEVRKS 2191
            GLRTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT + RITS++DS+G +KD+ +++ S
Sbjct: 489  GLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMS 548

Query: 2190 ILKVLVSVGMTPSLPKLEQAGPPEVLPVLLDGRVVGSIASEIIEKAVSHLRRLKVSATSV 2011
            IL VL+ VGMTPSLPK+   GPPE L VLLDG VVG IAS  +EK V+H+R LKVS+ +V
Sbjct: 549  ILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAV 608

Query: 2010 IPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNLLIPPEESNNIEHIGPFEQVYMEI 1831
            IP+D+EVGY+PLSMGGAYPGLYL TS SRFVRPVRN+ I  + S NIE IGPFEQV+MEI
Sbjct: 609  IPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEI 668

Query: 1830 SCPDGGDGGRKDVFPATHGEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSC 1651
             CPDGGDGGRK  FPATH EIHPT +LSVV NLTPWSDHNQSPRNMYQCQM KQTM FS 
Sbjct: 669  RCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSS 728

Query: 1650 QAIHSRADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLA 1510
            Q I  RADQKLYHLQTPQTPIVRT TY KYNID++P GTNAIVAVLA
Sbjct: 729  QTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLA 775



 Score =  611 bits (1575), Expect = 0.0
 Identities = 305/389 (78%), Positives = 338/389 (86%), Gaps = 1/389 (0%)
 Frame = -2

Query: 1495 GYIYQTESIDLTEQNIKSDRAQRSFGRSNLDKASHHLIDSDGLPHVGQRIGPNDPYCSIY 1316
            G IYQTE+IDLTEQ  +SDR+ R F +SN++K++   IDSDGLPHVGQ I P++PYCSIY
Sbjct: 799  GQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIY 858

Query: 1315 NEFTSRVTTTKLKGSEPVYVDYVAVDVKSKKHIQKANIRFRHPRNPIIGDKFSSRHGQKG 1136
            NE TS + T K KGSE VYVDYVA DVK+KKH+QK NIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 859  NEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKG 918

Query: 1135 VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 956
            VCSQLWPD DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+L G FVDATPF
Sbjct: 919  VCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF 978

Query: 955  SSSMTKKSAGSESDS-SLVDELGSMLVARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 779
             SS+TK S  S+S S SLVD+LG +L  +GFNYHG+EVLYSGVYGTELTCEIFIGPVYYQ
Sbjct: 979  RSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQ 1038

Query: 778  RLRHMVSDKFQVRSTGKVDQVTRQPIXXXXXXXGVRFGEMERDSLLAHGAAYLLHDRLHT 599
            RLRHMVSDKFQVRSTG +DQVTRQPI       G+RFGEMERDSLLAHGAAYLLHDRLHT
Sbjct: 1039 RLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHT 1098

Query: 598  SSDHHIADVCSLCGSILTTSLIQSNKKAVRDMIGRDLPPIRAPKKVTCVACKTSKGMETV 419
             SD+HIADVCSLCGS+L T+ IQ  K+ VR++ G  LPP RAPKKVTC AC+TSKGMETV
Sbjct: 1099 CSDYHIADVCSLCGSMLATTFIQPQKRPVREIGG--LPPGRAPKKVTCHACQTSKGMETV 1156

Query: 418  AMPYVFRYLAAELAAMNIKMTLQLSNGAG 332
            AMPYVFRYLAAELAAMNIKMTL+LS+GAG
Sbjct: 1157 AMPYVFRYLAAELAAMNIKMTLKLSDGAG 1185