BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00012552
         (3029 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1591   0.0  
ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1452   0.0  
emb|CDP02357.1| unnamed protein product [Coffea canephora]           1385   0.0  
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic...  1375   0.0  
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1372   0.0  
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...  1371   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1371   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1351   0.0  
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1330   0.0  
ref|XP_015063459.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1326   0.0  
ref|XP_015063457.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1326   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1320   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...  1320   0.0  
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1320   0.0  
ref|XP_015063458.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1319   0.0  
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1313   0.0  
ref|XP_015880486.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1311   0.0  
ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1297   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1297   0.0  
ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1297   0.0  

>ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 1032

 Score = 1591 bits (4120), Expect = 0.0
 Identities = 800/955 (83%), Positives = 841/955 (88%), Gaps = 3/955 (0%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSL 351
            M SSKTP SF F+ID  RTPFHKPV ILNP++   VMWRNI KQVSSRTP KL RNS SL
Sbjct: 1    MSSSKTPISFGFKIDNSRTPFHKPVLILNPYRDCRVMWRNIVKQVSSRTPLKLCRNSESL 60

Query: 352  SRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL---FRNQ 522
            SRTCSFLG  Q+S +PDK K R LFEL+S    CFP LGFQK+GD S+RDE      RNQ
Sbjct: 61   SRTCSFLGSAQESAFPDKFKFRPLFELNSRPTFCFPELGFQKLGDFSSRDEFSPFPARNQ 120

Query: 523  INLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQYST 702
            IN +GLC KS+              QTD  E NSVN S+AD+ QELL+EVRKEERRQY T
Sbjct: 121  INWNGLCFKSYASVAEAVAVS----QTDLVEENSVNVSVADEVQELLNEVRKEERRQYWT 176

Query: 703  QWRNRRNIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYMKSL 882
            +WR RR++RG+GNE+YK LRRRQVKIETEAW QAA+EYRELLNDMCEQKLAPNLPYMKSL
Sbjct: 177  RWRQRRSVRGMGNERYKALRRRQVKIETEAWGQAAKEYRELLNDMCEQKLAPNLPYMKSL 236

Query: 883  FLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGY 1062
            FLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFD LPADMMAVITMHKLM LLM GGEHG 
Sbjct: 237  FLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMTGGEHGC 296

Query: 1063 ARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTL 1242
            ARVVQAAC+IGDAIEQEVRI YFL                   DGN QEQEKL QRVT L
Sbjct: 297  ARVVQAACIIGDAIEQEVRIQYFLEKTKKKKVQKNTEKEGEEFDGNNQEQEKLHQRVTML 356

Query: 1243 MKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRP 1422
            +KKQKL+AVRQ+VN+QIEYQPWGQDAKAKVGS LIELILQTAYIQPPANQ  +GPPDIRP
Sbjct: 357  IKKQKLQAVRQLVNRQIEYQPWGQDAKAKVGSHLIELILQTAYIQPPANQSTEGPPDIRP 416

Query: 1423 AFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKG 1602
            AFVHT RTVTK+ KTSS+RYGVIQCD LVRKGLERTARHMVIPYMPMLVPPVKWTGYDKG
Sbjct: 417  AFVHTMRTVTKETKTSSKRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKG 476

Query: 1603 AYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSIIDRIWA 1782
            AY+YLPSYVMRTHGARQQRESVKRAP +QL+PVFEALDTLGSTRWRVNKRVLSIIDRIWA
Sbjct: 477  AYLYLPSYVMRTHGARQQRESVKRAPTEQLKPVFEALDTLGSTRWRVNKRVLSIIDRIWA 536

Query: 1783 SGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELKLAVAR 1962
            SGG LGDLVDR+DIPLPE+PDTEDEALL            ENSERHS RCDTELKLAVAR
Sbjct: 537  SGGCLGDLVDRSDIPLPERPDTEDEALLKKWKWKVKSIKKENSERHSIRCDTELKLAVAR 596

Query: 1963 KMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWLKIHLA 2142
            KMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGL WLKIHLA
Sbjct: 597  KMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLRWLKIHLA 656

Query: 2143 NLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACINLAEAM 2322
            NLFANGVDKL HEGR+AFTENHLDDI DSADRPLEGKRWWLNAEDPFQCLAACINLAEA+
Sbjct: 657  NLFANGVDKLSHEGRLAFTENHLDDIIDSADRPLEGKRWWLNAEDPFQCLAACINLAEAL 716

Query: 2323 RSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLD 2502
            RSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVL 
Sbjct: 717  RSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLK 776

Query: 2503 IMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDA 2682
            IMK+DAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A
Sbjct: 777  IMKDDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA 836

Query: 2683 IGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTPLGLPV 2862
            I DDAE+FGAACYAAK+TLTALGQMFEAARSIM+WLG+CAK+IA ENEPV WTTPLGLPV
Sbjct: 837  IADDAELFGAACYAAKITLTALGQMFEAARSIMTWLGECAKIIASENEPVCWTTPLGLPV 896

Query: 2863 VQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3027
            VQPYRKVGRHLIKTSLQVLTLQ ES+KVMVKRQRTAFPPNFVHSLDGSHMMMTAI
Sbjct: 897  VQPYRKVGRHLIKTSLQVLTLQRESEKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 951


>ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Erythranthe guttata]
            gi|604335441|gb|EYU39350.1| hypothetical protein
            MIMGU_mgv1a000681mg [Erythranthe guttata]
          Length = 1021

 Score = 1452 bits (3759), Expect = 0.0
 Identities = 751/967 (77%), Positives = 812/967 (83%), Gaps = 15/967 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSL 351
            M SSKTP S +F+I G R P H P    N   SSTVMW++IAK++SS+T      NS   
Sbjct: 1    MYSSKTPISTTFKIGGSRNPNHNPRSSSN---SSTVMWKSIAKRISSKTLLNRCPNSRR- 56

Query: 352  SRTCSFLGFGQDSVYPDKCKSRS-LFE-LHSSSNVCFPILGFQKIGDISTRDELLF---R 516
                 FL F QDSV+PDK K R  LF+   S SN+             ST DE +    R
Sbjct: 57   -----FLAFAQDSVFPDKFKLRKPLFDNSRSDSNIY-----------TSTHDEFMMFSSR 100

Query: 517  NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSS---------IADDFQELLSE 669
            NQ+N++GL  KS+               TD E+ N+ NS+         + D+FQELL+E
Sbjct: 101  NQMNVTGLSFKSYATVAEAVEVAGS--HTDFEDDNNSNSNNNNINNSNNVDDEFQELLNE 158

Query: 670  VRKEERRQYSTQWR-NRRNIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQ 846
            VRKEE+RQ    WR NRR+ +G+GNEK+K LRRRQVKIETEAWEQAA+EYRELLNDMCEQ
Sbjct: 159  VRKEEKRQ----WRQNRRSGKGMGNEKFKALRRRQVKIETEAWEQAAKEYRELLNDMCEQ 214

Query: 847  KLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKL 1026
            KLAPNLPYMKSLFLGWFEPLRNKI EEQEFIRKGKSKA+YA YFD LPADMMAVITMHKL
Sbjct: 215  KLAPNLPYMKSLFLGWFEPLRNKIEEEQEFIRKGKSKASYANYFDLLPADMMAVITMHKL 274

Query: 1027 MALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ 1206
            MALLM G EHG ARVV AACVIGDAIEQEVRIHYFL                   D NIQ
Sbjct: 275  MALLMTG-EHGCARVVAAACVIGDAIEQEVRIHYFLEKTKKKKVTKDAETEGDKPDENIQ 333

Query: 1207 EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA 1386
            EQ KLR++VT LMKKQKLRAVRQIVN+QIE Q WGQDAKAKVGSRLIELI+QTAYIQPPA
Sbjct: 334  EQAKLREKVTNLMKKQKLRAVRQIVNRQIESQAWGQDAKAKVGSRLIELIIQTAYIQPPA 393

Query: 1387 NQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPML 1566
            +Q A+GPPDI+PAF+HTF+TV K+IK++SRRYGVIQCD LVRKGLERTARHMVIPYMPML
Sbjct: 394  SQSAEGPPDIKPAFLHTFKTVAKEIKSNSRRYGVIQCDPLVRKGLERTARHMVIPYMPML 453

Query: 1567 VPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVN 1746
            VPPVKWTGYDKGAY+YLPSYVMRTHGARQQR++VKRAPR+QL+PVFEALDTLGST+WRVN
Sbjct: 454  VPPVKWTGYDKGAYLYLPSYVMRTHGARQQRDTVKRAPREQLKPVFEALDTLGSTKWRVN 513

Query: 1747 KRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQ 1926
            KRVLSIIDRIWASGG LGDLVDR+DI LPEQPDTEDE+LL            ENSERHSQ
Sbjct: 514  KRVLSIIDRIWASGGRLGDLVDRDDILLPEQPDTEDESLLQKWKWKVKSIKKENSERHSQ 573

Query: 1927 RCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLG 2106
            RCDTELKLAVARKMKEEEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRGILEFSEG+PLG
Sbjct: 574  RCDTELKLAVARKMKEEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGILEFSEGKPLG 633

Query: 2107 KSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQ 2286
            KSGL WLKIH+ANLFANGVDKL HEGRI F ENHLDD+FDSADRPLEGKRWWLNAEDPFQ
Sbjct: 634  KSGLRWLKIHVANLFANGVDKLSHEGRICFIENHLDDVFDSADRPLEGKRWWLNAEDPFQ 693

Query: 2287 CLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 2466
            CLAACINL EA+R+PSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA
Sbjct: 694  CLAACINLVEALRNPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 753

Query: 2467 DVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 2646
            DVYSGIA RVLDIMKEDAQKDP+V PDAL ARLLINQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 754  DVYSGIAARVLDIMKEDAQKDPSVCPDALHARLLINQVDRKLVKQTVMTSVYGVTYIGAR 813

Query: 2647 DQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENE 2826
            DQIKRRLKERDA GD+ +IFGAACYAAK+TLTALGQMFEAARSIM+WLGDCAK+IA ENE
Sbjct: 814  DQIKRRLKERDAFGDETQIFGAACYAAKITLTALGQMFEAARSIMNWLGDCAKIIASENE 873

Query: 2827 PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGS 3006
            PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPPNFVHSLDGS
Sbjct: 874  PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGS 933

Query: 3007 HMMMTAI 3027
            HMMMTAI
Sbjct: 934  HMMMTAI 940


>emb|CDP02357.1| unnamed protein product [Coffea canephora]
          Length = 1040

 Score = 1385 bits (3586), Expect = 0.0
 Identities = 709/967 (73%), Positives = 795/967 (82%), Gaps = 15/967 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLR-TPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTP-----SKL 330
            M S+K+P S +  I  L   P +KP + +L P + STVMW+NIAK VSSRT        +
Sbjct: 1    MSSTKSPISLNINIGRLTPNPVYKPRIFLLKPPEISTVMWKNIAKLVSSRTLRTQEFGSI 60

Query: 331  FRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL 510
            F N HSL RT SFLGF QDS++P+K K  +L + +  S   F   GF+K+G+ STRDE L
Sbjct: 61   F-NPHSLPRTYSFLGFSQDSIFPEKFKFSTL-DFNPCSGNGFLEQGFRKVGEFSTRDEFL 118

Query: 511  FR-------NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSE 669
             R       NQI+++GL  KS+               TD EE  SV +  AD+  ELLSE
Sbjct: 119  ARPSLNFARNQISINGLSQKSYASLAEAIAVS----STDVEEDTSVVA--ADEVHELLSE 172

Query: 670  VRKEERRQYSTQWR-NRRNIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQ 846
            ++KE+RRQ S +WR + R + G+G++KY  L+RRQVKIETEAWEQAA EY+ELLNDMCE 
Sbjct: 173  MKKEDRRQMSFRWRKHHRAVYGMGSKKYHALKRRQVKIETEAWEQAANEYKELLNDMCEH 232

Query: 847  KLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKL 1026
            KLAPNLPYMKSLFLGWFEPL +KIAEEQE  R  KSKAAYAKYF  LPADMM+VITMHKL
Sbjct: 233  KLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRLRKSKAAYAKYFHQLPADMMSVITMHKL 292

Query: 1027 MALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ 1206
            M LLM GGEHG ARVV AAC+IGDAIEQE+RIH FL                  +   IQ
Sbjct: 293  MGLLMTGGEHGSARVVPAACLIGDAIEQEIRIHKFLEKTKKKKVNEEMKMEGDMTTSVIQ 352

Query: 1207 EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA 1386
            EQEKLR+ VT LMKKQKL  V+QIV  Q + +PW  + KAKVGSRLIEL+LQTAYIQ PA
Sbjct: 353  EQEKLRRTVTNLMKKQKLHVVQQIVKGQDDSKPWSTEVKAKVGSRLIELLLQTAYIQSPA 412

Query: 1387 NQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPML 1566
            +QLAD PPDIRPAF+HTFRTVT + K+ SRRYG+IQCD LV KGLERTARHMVIPYMPML
Sbjct: 413  DQLADCPPDIRPAFIHTFRTVTNNTKSPSRRYGIIQCDPLVLKGLERTARHMVIPYMPML 472

Query: 1567 VPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVN 1746
            VPPVKWTGYDKG +++LPSYVMRTHGARQQRE+VKRAP  QLRPV+EALDTLG+T+WRVN
Sbjct: 473  VPPVKWTGYDKGGHLFLPSYVMRTHGARQQREAVKRAPINQLRPVYEALDTLGNTKWRVN 532

Query: 1747 KRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQ 1926
            KRVLS++DRIWASGG LG+LVDRNDI LPE+P+TEDEA+L            ENSERHSQ
Sbjct: 533  KRVLSVVDRIWASGGRLGNLVDRNDIALPEEPETEDEAILRKWKWKVKSIKKENSERHSQ 592

Query: 1927 RCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLG 2106
            RCD ELKLAVAR+MK+E GFFYPHNLDFRGRAYPMHPHLNHLGSD+CRG+LEF+EGRPLG
Sbjct: 593  RCDIELKLAVARRMKDEGGFFYPHNLDFRGRAYPMHPHLNHLGSDVCRGMLEFAEGRPLG 652

Query: 2107 KSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQ 2286
            KSGL WLKIHLANLFANGVDKL HE RIAFTENHL+DIFDSADRPLEG+RWWLNAEDPFQ
Sbjct: 653  KSGLHWLKIHLANLFANGVDKLSHEARIAFTENHLEDIFDSADRPLEGRRWWLNAEDPFQ 712

Query: 2287 CLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 2466
            CLA CINL+EA+RS SPETTISHIPVHQDGSCNGLQHYAALGRDKLGA+AVNLVAGEKPA
Sbjct: 713  CLAVCINLSEALRSQSPETTISHIPVHQDGSCNGLQHYAALGRDKLGASAVNLVAGEKPA 772

Query: 2467 DVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 2646
            DVYSGIA RVLDIMK DAQKDPAVFPDALRAR+L+NQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 773  DVYSGIAARVLDIMKRDAQKDPAVFPDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGAR 832

Query: 2647 DQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENE 2826
            DQIKRRLKER AI DDAE+FGAACYAAKVTLTAL +MFEAARSIMSWLG+CAK+IA EN+
Sbjct: 833  DQIKRRLKERGAIADDAELFGAACYAAKVTLTALEEMFEAARSIMSWLGECAKVIASENQ 892

Query: 2827 PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGS 3006
             VRW TPLGLPVVQPYR++GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPPNFVHSLDGS
Sbjct: 893  TVRWMTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGS 952

Query: 3007 HMMMTAI 3027
            HMMMTA+
Sbjct: 953  HMMMTAV 959


>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana
            sylvestris] gi|90111039|sp|Q8VWF8.2|RPOT2_NICSY RecName:
            Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor [Nicotiana sylvestris]
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1375 bits (3558), Expect = 0.0
 Identities = 695/960 (72%), Positives = 797/960 (83%), Gaps = 8/960 (0%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M S+KTP S + +++       KP  + +NP+ +S +MWRNI KQ+SSRTP KL  +S +
Sbjct: 1    MSSTKTPISLTIKLNQFTD---KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
              RT SFLGFGQDS++ D  K RSL  + S SN+   ++GFQ +G+    DE L R    
Sbjct: 58   --RTYSFLGFGQDSIFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLIK 111

Query: 517  NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 696
            NQ+N +  C KS+               TDAEE    + S+ D+  ELL+E++KEE++Q+
Sbjct: 112  NQVNNNFCCRKSYASVAEAVAVS----STDAEE----DVSVVDEVHELLTELKKEEKKQF 163

Query: 697  STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 873
            + + R +R +  G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 164  AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223

Query: 874  KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1053
            KSLFLGWFEPLR+KIAEEQE   +GKSKAAYAKYF  LPADMMAVITMHKLM LLM GG+
Sbjct: 224  KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD 283

Query: 1054 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1227
            HG ARVVQAA VIGDAIEQEVRIH FL                   DG    QEQEKLR+
Sbjct: 284  HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 339

Query: 1228 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1407
            +VT LMKKQKLRAV QIV +Q + +PWGQDA+AKVGSRLI+L+LQTAYIQPPANQLA  P
Sbjct: 340  KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDP 399

Query: 1408 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1587
            PDIRPAFVH+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 400  PDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 459

Query: 1588 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1767
            GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLG+T+WR+NKRVLS++
Sbjct: 460  GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVV 519

Query: 1768 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1947
            DRIWA GG L DLVDR+D PLPE+PDTEDEAL             EN ERHSQRCD ELK
Sbjct: 520  DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELK 579

Query: 1948 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2127
            LAVARKMK+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WL
Sbjct: 580  LAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWL 639

Query: 2128 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2307
            KIHLANLFA GV+KL  EGRI FTENH+DDIFDS+D+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 640  KIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCIN 699

Query: 2308 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2487
            L+EA+RS SPET++SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA
Sbjct: 700  LSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 759

Query: 2488 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2667
             RVLDIMK DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 760  ARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 819

Query: 2668 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2847
            KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 820  KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 879

Query: 2848 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3027
            LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 880  LGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 939


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 1372 bits (3550), Expect = 0.0
 Identities = 697/960 (72%), Positives = 795/960 (82%), Gaps = 8/960 (0%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M S+KTP S + +++       KP  + +N + +S +MWRNI KQ+SSRTP KL  +S +
Sbjct: 1    MSSTKTPISLTIKLNQFTD---KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
              RT SFLGFGQDSV+ D  K RSL  + S SN+   ++GFQ +G+    DE L R    
Sbjct: 58   --RTYSFLGFGQDSVFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLLK 111

Query: 517  NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 696
            +Q+N +  C +                 TDAEE    + S+ D+ QELL+E++KEE++Q+
Sbjct: 112  SQVNSNDFCCRK---SYASVAEAVAVSSTDAEE----DVSVVDEVQELLTELKKEEKKQF 164

Query: 697  STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 873
            + + R +R +  G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 165  AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 224

Query: 874  KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1053
            KSLFLGWFEPLR+KIAEEQE   +GKSKAAYAKY   LPADMMAVITMHKLM LLM GG+
Sbjct: 225  KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGD 284

Query: 1054 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1227
            HG ARVVQAA VIGDAIEQEVRIH FL                   DG    QEQEKLR+
Sbjct: 285  HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 340

Query: 1228 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1407
            +VT LMKKQKLRAV QIV +Q + +PWGQDAKAKVGSRLIEL+LQTAYIQPPANQLA  P
Sbjct: 341  KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDP 400

Query: 1408 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1587
            PDIRPAF+H+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 401  PDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 460

Query: 1588 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1767
            GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+NKRVLS++
Sbjct: 461  GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVV 520

Query: 1768 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1947
            DRIWA GG L DLVDR+D PLPE+PDTEDEAL             EN ERHSQRCD ELK
Sbjct: 521  DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELK 580

Query: 1948 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2127
            LAVARKMK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WL
Sbjct: 581  LAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWL 640

Query: 2128 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2307
            KIHLANLFA GV+KL  EGRIAFTENH+DDIFDSAD+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 641  KIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIN 700

Query: 2308 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2487
            L+EA+RS SPET+ISHIPVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA
Sbjct: 701  LSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIA 760

Query: 2488 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2667
             RVLDIMK DAQ+DPA FPDA+RAR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 761  ARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 820

Query: 2668 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2847
            KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 821  KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 880

Query: 2848 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3027
            LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 881  LGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 940


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1371 bits (3549), Expect = 0.0
 Identities = 693/960 (72%), Positives = 796/960 (82%), Gaps = 8/960 (0%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M S+KTP S + +++       KP  + +NP+ +S +MWRNI KQ+SSRTP KL  +S +
Sbjct: 1    MSSTKTPISLTIKLNQFTD---KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
              RT SFLGFGQDS++ D  K RSL  + S SN+   ++GFQ +G+    DE L R    
Sbjct: 58   --RTYSFLGFGQDSIFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLIK 111

Query: 517  NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 696
            NQ+N +  C KS+               TDAEE    + S+ D+  ELL+E++KEE++Q+
Sbjct: 112  NQVNNNFCCRKSYASVAEAVAVS----STDAEE----DVSVVDEVHELLTELKKEEKKQF 163

Query: 697  STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 873
            + + R +R +  G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 164  AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223

Query: 874  KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1053
            KSLFLGWFEPLR+KIAEEQE   +GKSKAAYAKYF  LPADMMAVITMHKLM LLM GG+
Sbjct: 224  KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD 283

Query: 1054 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1227
            HG ARVVQAA VIGDAIEQEVRIH FL                   DG    QEQEKLR+
Sbjct: 284  HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 339

Query: 1228 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1407
            +VT LMKKQKLRAV QIV +Q + +PWGQDA+AKVGSRLI+L+LQTAYIQPPANQLA  P
Sbjct: 340  KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDP 399

Query: 1408 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1587
            PDI PAFVH+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 400  PDIPPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 459

Query: 1588 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1767
            GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLG+T+WR+NKRVLS++
Sbjct: 460  GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVV 519

Query: 1768 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1947
            DRIWA GG L DLVDR+D PLPE+PDTEDEALL            EN ERHSQRCD ELK
Sbjct: 520  DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELK 579

Query: 1948 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2127
            LAVARKMK+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WL
Sbjct: 580  LAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWL 639

Query: 2128 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2307
            KIHLANLFA GV+KL  EGRI FTENH+DDIFDS+D+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 640  KIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCIN 699

Query: 2308 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2487
            L+EA+RS SPET++SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA+ YSGIA
Sbjct: 700  LSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIA 759

Query: 2488 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2667
             RVLDIMK DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 760  ARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 819

Query: 2668 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2847
            KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 820  KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 879

Query: 2848 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3027
            LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 880  LGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 939


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            [Nicotiana tabacum] gi|21425665|emb|CAC95020.1|
            mitochondrial and chloroplast RNA polymerase [Nicotiana
            tabacum]
          Length = 1021

 Score = 1371 bits (3549), Expect = 0.0
 Identities = 698/960 (72%), Positives = 794/960 (82%), Gaps = 8/960 (0%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M S+KTP S + +++       KP  + +N + +S +MWRNI KQ+SSRTP KL  +S +
Sbjct: 1    MSSTKTPISLTIKLNQFTD---KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
              RT SFLGFGQDSV+ D  K RSL  + S SN+   ++GFQ +G+    DE L R    
Sbjct: 58   --RTYSFLGFGQDSVFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLLK 111

Query: 517  NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 696
            NQ+N +  C +                 TDAEE    + S+ D+ QELL+E++KEE++Q+
Sbjct: 112  NQVNSNDFCCRK---SYASVAEAVAVSSTDAEE----DVSVVDEVQELLTELKKEEKKQF 164

Query: 697  STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 873
            + + R +R +  G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 165  AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 224

Query: 874  KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1053
            KSLFLGWFEPLR+KIAEEQE   +GKSKAAYAKY   LPADMMAVITMHKLM LLM GG+
Sbjct: 225  KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGD 284

Query: 1054 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1227
            HG ARVVQAA VIGDAIEQEVRIH FL                   DG    QEQEKLR+
Sbjct: 285  HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 340

Query: 1228 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1407
            +VT LMKKQKLRAV QIV +Q + +PWGQDAKAKVGSRLIEL+LQTAYIQPPANQLA  P
Sbjct: 341  KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDP 400

Query: 1408 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1587
            PDIRPAF+H+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 401  PDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 460

Query: 1588 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1767
            GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+NKRVLS+I
Sbjct: 461  GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVI 520

Query: 1768 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1947
            DRIWA GG L DLVDR+D PLPE+PDTEDEAL             EN ERHSQRCD ELK
Sbjct: 521  DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELK 580

Query: 1948 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2127
            LAVARKMK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+L F+EGRPLG+SGL WL
Sbjct: 581  LAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWL 640

Query: 2128 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2307
            KIHLANLFA GV+KL  EGRIAFTENH+DDIFDSAD+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 641  KIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIN 700

Query: 2308 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2487
            L+EA+RS SPET+ISHIPVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA
Sbjct: 701  LSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIA 760

Query: 2488 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2667
             RVLDIMK DAQ+DPA FPDA+RAR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 761  ARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 820

Query: 2668 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2847
            KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 821  KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 880

Query: 2848 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3027
            LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 881  LGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 940


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|731418092|ref|XP_010660553.1|
            PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|298204431|emb|CBI16911.3| unnamed protein product
            [Vitis vinifera]
          Length = 1035

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 689/966 (71%), Positives = 780/966 (80%), Gaps = 14/966 (1%)
 Frame = +1

Query: 172  MCSSKTPF---SFSFEIDGLRTPFHKPVDIL-NPHKSSTVMWRNIAKQVSSRTPSK-LFR 336
            M S KTP    +   ++D L   F KP +   NP K  TVMWRNIAK+   R P K ++ 
Sbjct: 1    MSSGKTPILSANLGRDLD-LIISFEKPTNFRPNPLKKPTVMWRNIAKRAIPRAPRKCVYL 59

Query: 337  NSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL-- 510
            +S  LSR  SFLGF QD ++P+  K  + FE  S S+  F  +GF++IG+IS+R++ +  
Sbjct: 60   DSQPLSRRYSFLGFSQDLIFPEIMKFGT-FEPSSCSSSGFSEMGFRRIGEISSREDAVGR 118

Query: 511  -----FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVR 675
                  RNQ+  SG CPKS+               TD EE    + S +D+ QELL E++
Sbjct: 119  PSFGCLRNQMGFSGFCPKSYASVAEAVS------STDVEE----DVSASDEIQELLGEMK 168

Query: 676  KEERRQYSTQWRNRRNI-RGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKL 852
            KEE+RQ + + R +  + RG+   +Y  LRRRQVKIETEAWE AA+EY+ELL DMCEQKL
Sbjct: 169  KEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKL 228

Query: 853  APNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMA 1032
            APNLPYMKSLFLGWFEPLR+ I +EQE  R GK+KAAYA YFD LPADMM+VITMHKL+ 
Sbjct: 229  APNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVG 288

Query: 1033 LLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQ 1212
            LLM GGEHG  RVVQAACVIGDAIEQEVRIH FL                   D  I EQ
Sbjct: 289  LLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQ 348

Query: 1213 EKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA-N 1389
            EKLR++VT LMKKQKL A RQIV      +PWG +AKAKVGSRLIEL++QTAYIQPP  N
Sbjct: 349  EKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDN 408

Query: 1390 QLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLV 1569
            QLAD PPDIRPAFVHTF+TV ++ K   RR+GVI+CD LV+KGLERTARHMVIPY+PMLV
Sbjct: 409  QLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLV 468

Query: 1570 PPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNK 1749
            PP+KWTGYDKGA+++LPSYVMRTHGARQQRE+VKRAPR QL PVFEAL+TLG+T+WR+NK
Sbjct: 469  PPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINK 528

Query: 1750 RVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQR 1929
            R+  ++DRIWA GG L DLVDRND+PLPE+PDTEDEA L             NSERHSQR
Sbjct: 529  RLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQR 588

Query: 1930 CDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGK 2109
            CD ELKLAVARKMK+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLG 
Sbjct: 589  CDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGS 648

Query: 2110 SGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQC 2289
            SGL WLKIHLANLFA GVDKL HEGRI FTENHLDDIFDSADRPLEGKRWWLNAEDPFQ 
Sbjct: 649  SGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQF 708

Query: 2290 LAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAD 2469
            LAACINL+EA+RS SPETTISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPAD
Sbjct: 709  LAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPAD 768

Query: 2470 VYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARD 2649
            VYSGIA RVLDIMK DA+KDPA+FPDALRAR+LINQVDRKLVKQTVMTSVYGVTYIGARD
Sbjct: 769  VYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARD 828

Query: 2650 QIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEP 2829
            QIKRRLKER+AI DD E+FGAACYAAK+TLTALG+MF+AARSIMSWLGDCAK+IA EN+P
Sbjct: 829  QIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQP 888

Query: 2830 VRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSH 3009
            VRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E++ +MVKRQRTAFPPNFVHSLDGSH
Sbjct: 889  VRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSH 948

Query: 3010 MMMTAI 3027
            MMMTAI
Sbjct: 949  MMMTAI 954


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Solanum tuberosum]
          Length = 1019

 Score = 1330 bits (3441), Expect = 0.0
 Identities = 682/962 (70%), Positives = 777/962 (80%), Gaps = 10/962 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEID---GLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNS 342
            M  +KTP S + + +    L T         NP+++S +MWRNI KQ SSRTP K+   S
Sbjct: 1    MSCTKTPISLTIKFNQFTNLET---------NPYQNSPIMWRNIVKQFSSRTPQKILLTS 51

Query: 343  HSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDIST--RDELL-- 510
             +  RT SFLGFGQDSV+ DK   RS   + S SN  F  +GFQ +G+     R  LL  
Sbjct: 52   KN--RTYSFLGFGQDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFDEFLRRPLLCA 108

Query: 511  FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERR 690
             ++Q++ + +C KS+               TDAEE    + S+  + QELL+E++KEE++
Sbjct: 109  MKSQVSNNDICRKSYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEKK 160

Query: 691  QYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLP 867
            Q++ + RN+R +  G+   KY  L+RRQVKIET+AWE AA+EYRELL DMCEQKLAPNLP
Sbjct: 161  QFTFRRRNQRLLTSGIDRRKYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLP 220

Query: 868  YMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIG 1047
            Y+KSLFLGWFEPLR+KIA+EQE   +GKSKAAY+KYF  LPADMMAVITMHKLM LLM G
Sbjct: 221  YVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTG 280

Query: 1048 GEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKL 1221
            GEHG ARVVQAA  IGDAIEQEVRIH FL                   DG     EQ+KL
Sbjct: 281  GEHGNARVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRKM----EDGEHATLEQKKL 336

Query: 1222 RQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLAD 1401
             ++VT+LMKKQKLRAV QIV  Q + +PWGQDAKAKVGSRLIE +LQTAYIQ PA+QLA 
Sbjct: 337  HKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAV 396

Query: 1402 GPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVK 1581
             PPDIRPAF+H+ RTV K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPMLVPPVK
Sbjct: 397  DPPDIRPAFIHSTRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVK 456

Query: 1582 WTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLS 1761
            WTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QLRPVFEALDTLGST+WR+NKRVLS
Sbjct: 457  WTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLS 516

Query: 1762 IIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTE 1941
            ++DRIWA GG L DLVDR+D PLPE+PDTEDEA+             EN ERHSQRCD E
Sbjct: 517  VVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIE 576

Query: 1942 LKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLC 2121
            LKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPLG+SGL 
Sbjct: 577  LKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLR 636

Query: 2122 WLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAAC 2301
            WLKIHLANLFA GVDKL  +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPFQCLA C
Sbjct: 637  WLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVC 696

Query: 2302 INLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSG 2481
            INL+EA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSG
Sbjct: 697  INLSEAVRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSG 756

Query: 2482 IATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 2661
            IA RVLDIM  DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKR
Sbjct: 757  IAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKR 816

Query: 2662 RLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWT 2841
            RLKER AI DD+E+FGAA YAAKVTLTALG+MFEAARSIM+WL +CAK+IA ENEPVRWT
Sbjct: 817  RLKERGAIADDSELFGAASYAAKVTLTALGEMFEAARSIMTWLAECAKIIASENEPVRWT 876

Query: 2842 TPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMT 3021
            TPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMT
Sbjct: 877  TPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMT 936

Query: 3022 AI 3027
            A+
Sbjct: 937  AV 938


>ref|XP_015063459.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X3 [Solanum pennellii]
          Length = 967

 Score = 1326 bits (3431), Expect = 0.0
 Identities = 676/968 (69%), Positives = 775/968 (80%), Gaps = 16/968 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEID-GLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M  +KTP S + + +  L T         NP+ +S +MWRNI KQ S+RTP K+   S +
Sbjct: 1    MSCTKTPISLTIKFNTDLET---------NPYHNSPIMWRNIVKQFSTRTPQKILLTSKN 51

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
                 S+LGFG DSV+ DK   RS   + S SN  F  +GFQ +G+    DE L R    
Sbjct: 52   --HAYSYLGFGLDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 108

Query: 517  ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 687
               +Q++ + +C K++               TDAEE    + S+  + QELL+E++KEE+
Sbjct: 109  AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 160

Query: 688  RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 864
            +Q++ + R +R +  G+   KY  L RRQV+IET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 161  KQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNL 220

Query: 865  PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1044
            PY+KSLFLGWFEPLRNKIA+EQE   +GKSKAAY+KYF  LPADMMAVITMHKLM LLM 
Sbjct: 221  PYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 280

Query: 1045 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ------ 1206
            GGEHG  RVVQAA  IGDAIEQEVRIH FL                   D NI+      
Sbjct: 281  GGEHGNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKAE---------KDRNIKDGEHAT 331

Query: 1207 -EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1383
             EQ+KL ++VT+LMKKQKLRAV QIV  Q + +PWGQDAKAKVGSRLIE +LQTAYIQ P
Sbjct: 332  LEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSP 391

Query: 1384 ANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPM 1563
            A+QLA  PPDIRPAF+H+ RT+ K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPM
Sbjct: 392  ADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPM 451

Query: 1564 LVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRV 1743
            LVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+
Sbjct: 452  LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRI 511

Query: 1744 NKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHS 1923
            NKRVLS++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+             EN ERHS
Sbjct: 512  NKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHS 571

Query: 1924 QRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPL 2103
            QRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPL
Sbjct: 572  QRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPL 631

Query: 2104 GKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPF 2283
            G+SGL WLKIHLANLFA GVDKL  +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPF
Sbjct: 632  GESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPF 691

Query: 2284 QCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 2463
            QCLA CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP
Sbjct: 692  QCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 751

Query: 2464 ADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGA 2643
            ADVYSGIA RVLDIM  DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 752  ADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGA 811

Query: 2644 RDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMEN 2823
            RDQIKRRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA EN
Sbjct: 812  RDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASEN 871

Query: 2824 EPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDG 3003
            EPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDG
Sbjct: 872  EPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDG 931

Query: 3004 SHMMMTAI 3027
            SHMMMTA+
Sbjct: 932  SHMMMTAV 939


>ref|XP_015063457.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Solanum
            pennellii]
          Length = 1020

 Score = 1326 bits (3431), Expect = 0.0
 Identities = 676/968 (69%), Positives = 775/968 (80%), Gaps = 16/968 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEID-GLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M  +KTP S + + +  L T         NP+ +S +MWRNI KQ S+RTP K+   S +
Sbjct: 1    MSCTKTPISLTIKFNTDLET---------NPYHNSPIMWRNIVKQFSTRTPQKILLTSKN 51

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
                 S+LGFG DSV+ DK   RS   + S SN  F  +GFQ +G+    DE L R    
Sbjct: 52   --HAYSYLGFGLDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 108

Query: 517  ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 687
               +Q++ + +C K++               TDAEE    + S+  + QELL+E++KEE+
Sbjct: 109  AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 160

Query: 688  RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 864
            +Q++ + R +R +  G+   KY  L RRQV+IET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 161  KQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNL 220

Query: 865  PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1044
            PY+KSLFLGWFEPLRNKIA+EQE   +GKSKAAY+KYF  LPADMMAVITMHKLM LLM 
Sbjct: 221  PYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 280

Query: 1045 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ------ 1206
            GGEHG  RVVQAA  IGDAIEQEVRIH FL                   D NI+      
Sbjct: 281  GGEHGNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKAE---------KDRNIKDGEHAT 331

Query: 1207 -EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1383
             EQ+KL ++VT+LMKKQKLRAV QIV  Q + +PWGQDAKAKVGSRLIE +LQTAYIQ P
Sbjct: 332  LEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSP 391

Query: 1384 ANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPM 1563
            A+QLA  PPDIRPAF+H+ RT+ K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPM
Sbjct: 392  ADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPM 451

Query: 1564 LVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRV 1743
            LVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+
Sbjct: 452  LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRI 511

Query: 1744 NKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHS 1923
            NKRVLS++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+             EN ERHS
Sbjct: 512  NKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHS 571

Query: 1924 QRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPL 2103
            QRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPL
Sbjct: 572  QRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPL 631

Query: 2104 GKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPF 2283
            G+SGL WLKIHLANLFA GVDKL  +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPF
Sbjct: 632  GESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPF 691

Query: 2284 QCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 2463
            QCLA CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP
Sbjct: 692  QCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 751

Query: 2464 ADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGA 2643
            ADVYSGIA RVLDIM  DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 752  ADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGA 811

Query: 2644 RDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMEN 2823
            RDQIKRRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA EN
Sbjct: 812  RDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASEN 871

Query: 2824 EPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDG 3003
            EPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDG
Sbjct: 872  EPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDG 931

Query: 3004 SHMMMTAI 3027
            SHMMMTA+
Sbjct: 932  SHMMMTAV 939


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1320 bits (3417), Expect = 0.0
 Identities = 671/936 (71%), Positives = 767/936 (81%), Gaps = 12/936 (1%)
 Frame = +1

Query: 256  NPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELH 435
            N  + ST MWR+IA++ +S T  +L R+S S+ RT  F+GF QDS+  D  +    FEL 
Sbjct: 32   NSSRISTAMWRHIARR-ASLTKVRLSRDSSSILRTFGFMGFSQDSILNDTTRP---FELK 87

Query: 436  SSSNVCFPILGFQKIGDISTRDELL-------FRNQINLSGLC--PKSFXXXXXXXXXXX 588
            SS +  F    F + G++ ++++ L       FRN I+   L   PK +           
Sbjct: 88   SSMSFRFSERSFLRNGELPSKEDELGRPILGCFRNPISPPRLSNHPKGYASVAEAVC--- 144

Query: 589  XXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQYSTQWRNRRNIR---GVGNEKYKTL 759
                 DAEE    + S  D+ QELL E+ KEE+++   + R+++ I+   G+G  KY  L
Sbjct: 145  ---SMDAEE----DLSAIDEIQELLEEMGKEEKKEL--ELRDQKQIKLVGGMGQGKYLLL 195

Query: 760  RRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFI 939
            RRRQVKIETEAWEQAA+EYRELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ I  EQE  
Sbjct: 196  RRRQVKIETEAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELC 255

Query: 940  RKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVR 1119
            RKGK++ AYA YFD LPA+MM+VITMHKLM LLM GGEHG  RVVQAAC IG+AIE EVR
Sbjct: 256  RKGKNRTAYAPYFDQLPAEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVR 315

Query: 1120 IHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEY 1299
            IH FL                  SD  I+EQ++LR++VT LMKKQKL+ VRQIV  Q + 
Sbjct: 316  IHKFLEKTRKKTDKDKKADGGE-SDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDS 374

Query: 1300 QPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTSSRR 1479
            +PWGQDA+AKVGSRLIEL++QTAYIQPP +QLADGPPDIRPAF H+ +TVTK+ + +SRR
Sbjct: 375  KPWGQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRR 434

Query: 1480 YGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQR 1659
            YGVI+CD LVRKGLERTARHMVIPYMPMLVPPV WTGYDKGAY++LPSYVMRTHGARQQR
Sbjct: 435  YGVIECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQR 494

Query: 1660 ESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQ 1839
            E+VKRAPRKQL PVFEALDTLG+T+WRVNKRVLS++DRIWASGG L DLVDR D+P+PE+
Sbjct: 495  EAVKRAPRKQLEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEE 554

Query: 1840 PDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGR 2019
            PDTEDEA +            ENSERHSQRCD ELKLAVAR+MK+E+GFFYPHNLDFRGR
Sbjct: 555  PDTEDEAEIKKWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGR 614

Query: 2020 AYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFT 2199
            AYPMHP+LNHLGSD+CRGILEF+EGRPLGKSGL WLKIHLANL+A GVDKL +EGRIAFT
Sbjct: 615  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFT 674

Query: 2200 ENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGS 2379
            ENHLDDIFDSADRPLEG+RWWLNAEDPFQCLAACINL+EA+RS SPETTISH+PVHQDGS
Sbjct: 675  ENHLDDIFDSADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGS 734

Query: 2380 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRA 2559
            CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVLDIM+ DA+KDP   P+A+ A
Sbjct: 735  CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHA 794

Query: 2560 RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTL 2739
            R+LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+ I DD+E+FGA+CYAAK TL
Sbjct: 795  RILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTL 854

Query: 2740 TALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVL 2919
            TALG+MFEAARSIMSWLGDCAK+IA EN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQVL
Sbjct: 855  TALGEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 914

Query: 2920 TLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3027
            TLQ E+DKVMVKRQRTAFPPNFVHSLDGSHMMMTA+
Sbjct: 915  TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 950


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 1320 bits (3416), Expect = 0.0
 Identities = 670/941 (71%), Positives = 751/941 (79%), Gaps = 9/941 (0%)
 Frame = +1

Query: 232  FHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSLSRTCSFLGFGQDSVYPDKC 408
            FH P+    NP   ST +WRN AKQ  SR   +   NS S SR  S LG  Q+SV+P   
Sbjct: 19   FHSPLIFHKNPSMISTTVWRNFAKQAISRK-QRFHINSQSFSRAYSLLGICQESVFPGNF 77

Query: 409  KSRSLFELHSSSNVCFPILGFQKIGDISTRDELL-------FRNQINLSGLCPKSFXXXX 567
            K    FEL S S++ F  +GF+  G IS+ ++ +        RN I  +G CPK +    
Sbjct: 78   KP---FELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVA 134

Query: 568  XXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQYSTQWRNRRN-IRGVGNE 744
                       TD EE      S+ D+ QELL ++  EE+R+   + R R+N  RG+G  
Sbjct: 135  EAVS------STDVEE----EVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQG 184

Query: 745  KYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAE 924
            KY  L+RRQ+KIETEAWE+AA+EYREL+ DMCEQKLAPNLPYMKSLFLGWFEPLRN I +
Sbjct: 185  KYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDK 244

Query: 925  EQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAI 1104
            EQ+  RKGK+K AYA Y D LPADMM+VITMHKLM LLM GGEHG  RVV AAC IG+AI
Sbjct: 245  EQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAI 304

Query: 1105 EQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVN 1284
            EQEVRIH FL                  SD   +E+EKL ++VT LMKKQKL+AVR IV+
Sbjct: 305  EQEVRIHKFLEMTRKKKVDKDQENGE--SDAAKKEREKLNKKVTNLMKKQKLKAVRGIVS 362

Query: 1285 KQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIK 1464
            K    + W  +A+AKVGSRLIEL+ QTA+IQPPA+QLADGPPDIRPAFVHTFRTV KD K
Sbjct: 363  KHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAK 422

Query: 1465 TSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHG 1644
             +SRRYGVI+CD LV KGLE+TARHMVIPYMPMLVPP+ WTGYDKG Y +LPSYVMR HG
Sbjct: 423  NASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHG 482

Query: 1645 ARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDI 1824
            ARQQRE++KR PR+QL PVF+ALD LG+TRWRVNKRVLS++DRIWASGGHL DLVDRND+
Sbjct: 483  ARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDV 542

Query: 1825 PLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNL 2004
            PLPE+PDTEDE LL            EN ERHSQRCDTELKLAVARKMK+EEGF+YPHNL
Sbjct: 543  PLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNL 602

Query: 2005 DFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEG 2184
            DFRGRAYPMHP+LNHLGSD+CRGILEF EGRPLGKSGL WLKIHLANL+A GVDKL  EG
Sbjct: 603  DFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEG 662

Query: 2185 RIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPV 2364
            RIAFTENHLDDIFDS D+PLEG+RWWL AEDPFQCLA CINLAEA+RS SPET ISHIPV
Sbjct: 663  RIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPV 722

Query: 2365 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFP 2544
            HQDGSCNGLQHYAALGRDKLGAA+VNLV GEKPADVYSGIA RVL+IM+ DAQKDP VFP
Sbjct: 723  HQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFP 782

Query: 2545 DALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYA 2724
            +ALRA+LLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER +I DDAEIFG ACYA
Sbjct: 783  EALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYA 842

Query: 2725 AKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKT 2904
            AK+TLTALG+MFEAAR IMSWLG+CAK+IA EN+PVRWTTPLGLPVVQPYRK GRHLIKT
Sbjct: 843  AKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKT 902

Query: 2905 SLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3027
            SLQVLTLQ E++KVMVKRQRTAFPPNFVHSLD SHMMMTAI
Sbjct: 903  SLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAI 943


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Solanum lycopersicum]
          Length = 1022

 Score = 1320 bits (3416), Expect = 0.0
 Identities = 673/963 (69%), Positives = 768/963 (79%), Gaps = 11/963 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M  +KTP S +   D          D+  NP+  S +MWRNI KQ S+RTP K+   S +
Sbjct: 1    MSCTKTPISLTIRFDQF-------TDLETNPYHISPIMWRNIVKQFSTRTPQKILLTSKN 53

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
                 S+LGFG  SV+ DK   RS   + S SN  F  +GFQ +G+    DE L R    
Sbjct: 54   --HAYSYLGFGLHSVFKDKRTLRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 110

Query: 517  ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 687
               +Q++ + +C K++               TDAEE    + S+  + QELL+E++KEE+
Sbjct: 111  AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 162

Query: 688  RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 864
            +Q++ + R +R +  G+   KY  L RRQVKIET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 163  KQFTFRRRKQRMLTSGIDRRKYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNL 222

Query: 865  PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1044
            PY+KSLFLGWFEPLR+KIA+EQE   +GKSKAAY+KYF  LPADMMAVITMHKLM LLM 
Sbjct: 223  PYVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 282

Query: 1045 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEK 1218
            GGEHG  RVVQAA  IGDAIEQEVRIH FL                   DG     EQ+K
Sbjct: 283  GGEHGNVRVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRNM----EDGEHATLEQKK 338

Query: 1219 LRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLA 1398
            L ++VT+LMKKQKLRAV QIV  Q + +PWGQDAKAKVGSRLIE +LQTAYIQ PA+QLA
Sbjct: 339  LHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLA 398

Query: 1399 DGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPV 1578
              PPDIRPAF+H+ RT+ K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPMLVPPV
Sbjct: 399  VDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPV 458

Query: 1579 KWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVL 1758
            KWTGYDKG ++YLPSYVMRTHGARQQRE+VKR  R QL+PVFEALDTLGST+WR+NKRVL
Sbjct: 459  KWTGYDKGGHLYLPSYVMRTHGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVL 518

Query: 1759 SIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDT 1938
            S++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+             EN ERHSQRCD 
Sbjct: 519  SVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDI 578

Query: 1939 ELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGL 2118
            ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPLGKSGL
Sbjct: 579  ELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGL 638

Query: 2119 CWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAA 2298
             WLKIHLANLFA GVDKL  +GRIAFTE+HLDDIFDSAD+PLEG+ WWLNAEDPFQCLA 
Sbjct: 639  RWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAV 698

Query: 2299 CINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 2478
            CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS
Sbjct: 699  CINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 758

Query: 2479 GIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 2658
            GIA RVLDIM  DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIK
Sbjct: 759  GIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIK 818

Query: 2659 RRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRW 2838
            RRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRW
Sbjct: 819  RRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRW 878

Query: 2839 TTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMM 3018
            TTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMM
Sbjct: 879  TTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMM 938

Query: 3019 TAI 3027
            TA+
Sbjct: 939  TAV 941


>ref|XP_015063458.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Solanum
            pennellii]
          Length = 1019

 Score = 1319 bits (3413), Expect = 0.0
 Identities = 675/968 (69%), Positives = 773/968 (79%), Gaps = 16/968 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEID-GLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M  +KTP S + + +  L T         NP+ +S +MWRNI KQ S+RTP K+   S +
Sbjct: 1    MSCTKTPISLTIKFNTDLET---------NPYHNSPIMWRNIVKQFSTRTPQKILLTSKN 51

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 516
                 S+LGFG DSV+ DK   RS   + S SN  F  +GFQ +G+    DE L R    
Sbjct: 52   --HAYSYLGFGLDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 108

Query: 517  ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 687
               +Q++ + +C K++               TDAEE    + S+  + QELL+E++KEE+
Sbjct: 109  AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 160

Query: 688  RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 864
            +Q++ + R +R +  G+   KY  L RRQV+IET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 161  KQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNL 220

Query: 865  PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1044
            PY+KSLFLGWFEPLRNKIA+EQE   +GKSKAAY+KYF  LPADMMAVITMHKLM LLM 
Sbjct: 221  PYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 280

Query: 1045 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ------ 1206
            GGEHG  RVVQAA  IGDAIEQEVRIH FL                   D NI+      
Sbjct: 281  GGEHGNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKAE---------KDRNIKDGEHAT 331

Query: 1207 -EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1383
             EQ+KL ++VT+LMKKQKLRAV QIV  Q + +PWGQDAKAKVGSRLIE +LQTAYIQ P
Sbjct: 332  LEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSP 391

Query: 1384 ANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPM 1563
            A+QLA  PPDIRPAF+H+ RT+ K+   +SRRYGVIQCD LV KGLERTARHMVIPYMPM
Sbjct: 392  ADQLAVDPPDIRPAFIHSTRTLAKETN-ASRRYGVIQCDELVFKGLERTARHMVIPYMPM 450

Query: 1564 LVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRV 1743
            LVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+
Sbjct: 451  LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRI 510

Query: 1744 NKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHS 1923
            NKRVLS++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+             EN ERHS
Sbjct: 511  NKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHS 570

Query: 1924 QRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPL 2103
            QRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPL
Sbjct: 571  QRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPL 630

Query: 2104 GKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPF 2283
            G+SGL WLKIHLANLFA GVDKL  +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPF
Sbjct: 631  GESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPF 690

Query: 2284 QCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 2463
            QCLA CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP
Sbjct: 691  QCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 750

Query: 2464 ADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGA 2643
            ADVYSGIA RVLDIM  DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 751  ADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGA 810

Query: 2644 RDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMEN 2823
            RDQIKRRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA EN
Sbjct: 811  RDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASEN 870

Query: 2824 EPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDG 3003
            EPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDG
Sbjct: 871  EPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDG 930

Query: 3004 SHMMMTAI 3027
            SHMMMTA+
Sbjct: 931  SHMMMTAV 938


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X1 [Prunus mume]
          Length = 1024

 Score = 1313 bits (3399), Expect = 0.0
 Identities = 671/961 (69%), Positives = 756/961 (78%), Gaps = 9/961 (0%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 348
            M SS+TP S +         FH P+    NP   ST +WRN AKQ  SR   +   NS S
Sbjct: 1    MSSSQTPLSPANISKNFT--FHSPLIFHKNPSMISTTVWRNFAKQAISRK-QRFHINSQS 57

Query: 349  LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL------ 510
             SR  S L   Q+SV+P   K    FEL S S++ F  +GF+  G IS+ ++ +      
Sbjct: 58   FSRAYSLLRICQESVFPGNFKP---FELSSCSSLRFSEVGFRGKGTISSPEDCMCKPSFW 114

Query: 511  -FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 687
              RN I  +G CPK +               TD EE    + S+ D+ QELL ++  EE+
Sbjct: 115  SVRNPIGFNGFCPKGYASVAEAVS------STDVEE----DVSVVDEVQELLQQMSIEEK 164

Query: 688  RQYSTQWRNRRN-IRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 864
            R+   + R R+N  RG+G  KY  L+RRQ+KIETEAWE+AA+EYREL+ DMCEQKLAPNL
Sbjct: 165  REAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNL 224

Query: 865  PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1044
            PYMKSLFLGWFEPLRN I  EQ+  RKGK KAAYA Y D LPADMM+VITMHKLM LLM 
Sbjct: 225  PYMKSLFLGWFEPLRNAIDNEQDLCRKGKKKAAYAPYIDQLPADMMSVITMHKLMGLLMT 284

Query: 1045 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLR 1224
            GGEHG  RVV AAC IG+AIEQEVRIH FL                  SD  ++E+EKL 
Sbjct: 285  GGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGE--SDAAMKEREKLN 342

Query: 1225 QRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADG 1404
            ++VT LMKKQKL+AVR IV+K    + W  +A+AK+GSRLIEL+ QTA+IQPPA+QLADG
Sbjct: 343  KKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKIGSRLIELLTQTAFIQPPADQLADG 402

Query: 1405 PPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKW 1584
            PPDIRPAFVHTFRTV KD K +SRRYGVI+CD LV KGLE+TARH++IPYMPMLVPP+ W
Sbjct: 403  PPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHVMIPYMPMLVPPLNW 462

Query: 1585 TGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSI 1764
            TGYDKG Y +LPSYVMR HGARQQRE++KR PR+QL PVF+ALD LG+TRWRVNKRVLS+
Sbjct: 463  TGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSV 522

Query: 1765 IDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTEL 1944
            +DRIWASGGHL DLVDRND+PLPE+PDTEDE LL            EN ERHSQRCD EL
Sbjct: 523  VDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDIEL 582

Query: 1945 KLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCW 2124
            KLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPLGKSGL W
Sbjct: 583  KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSW 642

Query: 2125 LKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACI 2304
            LKIHLANL+A GVDKL  EGRIAFTENHLDDIFDS D PLEG+RWWL AEDPFQCLA CI
Sbjct: 643  LKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDIPLEGRRWWLKAEDPFQCLAVCI 702

Query: 2305 NLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGI 2484
            NLAEA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAA+VNLV GEKPADVYSGI
Sbjct: 703  NLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGI 762

Query: 2485 ATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 2664
            A RVL+IM+ DAQKDP VFP+AL A+LLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR
Sbjct: 763  AVRVLEIMRRDAQKDPTVFPEALHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 822

Query: 2665 LKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTT 2844
            LKER +I DDAEIFG ACYAAK+TLTALG+MFEAAR IMSWLG+CAK+IA EN+PVRWTT
Sbjct: 823  LKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTT 882

Query: 2845 PLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 3024
            PLGLPVVQPYRK GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPPNFVHSLD SHMMMTA
Sbjct: 883  PLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTA 942

Query: 3025 I 3027
            I
Sbjct: 943  I 943


>ref|XP_015880486.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Ziziphus jujuba]
            gi|1009127049|ref|XP_015880487.1| PREDICTED: DNA-directed
            RNA polymerase 2B, chloroplastic/mitochondrial [Ziziphus
            jujuba]
          Length = 1028

 Score = 1311 bits (3393), Expect = 0.0
 Identities = 673/964 (69%), Positives = 769/964 (79%), Gaps = 12/964 (1%)
 Frame = +1

Query: 172  MCSSKTPFSFSFEIDGL--RTPFHKPVDILN-PHKSSTVMWRNIAKQVSSRTPSKLFRNS 342
            M  +KTP   +    G+   + + KP  +   P   ST+MWRN A+Q  SR   +   +S
Sbjct: 1    MSCAKTPSISADFSQGIYHSSQYRKPSIVRTIPSTVSTLMWRNFARQAFSRN-LRFRPDS 59

Query: 343  HSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL---- 510
            HS SR CSFLG  + S   +K K R  FEL S S+  F   GF + G+IS+ D+ +    
Sbjct: 60   HSFSRACSFLGKTEHS---EKLKFRP-FELSSCSSYGFSETGFCRNGEISSHDDPVSRLG 115

Query: 511  ---FRNQINLS-GLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRK 678
                RNQ+  + G+CPK +               T+ E+    + S  ++ QELL ++ K
Sbjct: 116  YGFVRNQVAGNIGICPKGYASVAEAVS------STEVED----DISAGEEIQELLQQMNK 165

Query: 679  EERRQYSTQWRNRRN-IRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLA 855
            EE+++     RN +  +RG+G +KY+ LRRRQVKIETEAWEQA +EY+ELL DMCEQKLA
Sbjct: 166  EEKKEILNMRRNHQKMVRGMGEKKYQVLRRRQVKIETEAWEQALKEYKELLMDMCEQKLA 225

Query: 856  PNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMAL 1035
            PNLPYMKSLFLGWFEPLRN IA+EQE  R+GK+K AYA YFD LPA+MMAVITMHKLM L
Sbjct: 226  PNLPYMKSLFLGWFEPLRNAIAKEQELCRQGKNKPAYAPYFDQLPAEMMAVITMHKLMGL 285

Query: 1036 LMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQE 1215
            LM GGEHG ARVV AAC+IGDAIEQEVRI  FL                   D  I+EQ 
Sbjct: 286  LMTGGEHGTARVVPAACIIGDAIEQEVRIQRFLEKTRKKKLGKDKEDEGY-EDTMIKEQ- 343

Query: 1216 KLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQL 1395
            KL+++VT LMKKQKLRAVRQIV +Q + + WGQDA+AKVGSRLIEL+ +TA+IQPPA+Q 
Sbjct: 344  KLKKKVTDLMKKQKLRAVRQIVKRQDDLKSWGQDARAKVGSRLIELLTETAHIQPPADQS 403

Query: 1396 ADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPP 1575
            ADGPPD+RPAF+HTFRTV K+ K + RRYGVI+CD LV KGL+RTARHMVIPYMPMLVPP
Sbjct: 404  ADGPPDVRPAFLHTFRTVVKNAKNTGRRYGVIECDPLVLKGLDRTARHMVIPYMPMLVPP 463

Query: 1576 VKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRV 1755
            V WTGYDKG ++YLPSYVMRTHGARQQRE+VKRAPR+QL PVFEALD LG+T+WR+NKR+
Sbjct: 464  VNWTGYDKGGHLYLPSYVMRTHGARQQREAVKRAPREQLEPVFEALDALGNTKWRINKRI 523

Query: 1756 LSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCD 1935
            LSI+DRIW S G L DLVDR+D+PLPE PDTEDE LL            EN ERHSQRCD
Sbjct: 524  LSIVDRIWVSSGRLADLVDRDDVPLPEMPDTEDETLLKKWKWKVKNVKKENRERHSQRCD 583

Query: 1936 TELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSG 2115
            TELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSG
Sbjct: 584  TELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 643

Query: 2116 LCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLA 2295
            L WLKIHLANL+A GVDKL  EGRIAFTENHLD+IFDSAD PLEGKRWWLNAEDPFQCLA
Sbjct: 644  LRWLKIHLANLYAGGVDKLSLEGRIAFTENHLDEIFDSADSPLEGKRWWLNAEDPFQCLA 703

Query: 2296 ACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 2475
             CINL EA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDK GAAAVNLVAGEKPADVY
Sbjct: 704  VCINLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKSGAAAVNLVAGEKPADVY 763

Query: 2476 SGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQI 2655
            SGIA  VL IMK DA++DPA+FPDALRA++LINQVDRKLVKQTVMTSVYGVTYIGARDQI
Sbjct: 764  SGIAASVLKIMKRDAERDPAIFPDALRAKVLINQVDRKLVKQTVMTSVYGVTYIGARDQI 823

Query: 2656 KRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVR 2835
            KRRLKER  I DD+E+FG ACYAAK TLTALGQMFEAAR+IM+WLGDCAK+IA EN+PVR
Sbjct: 824  KRRLKERGGITDDSELFGCACYAAKTTLTALGQMFEAARNIMNWLGDCAKIIASENQPVR 883

Query: 2836 WTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMM 3015
            WTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPPNFVHSLDGSHMM
Sbjct: 884  WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMM 943

Query: 3016 MTAI 3027
            MTA+
Sbjct: 944  MTAV 947


>ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X2 [Nelumbo
            nucifera]
          Length = 942

 Score = 1297 bits (3357), Expect = 0.0
 Identities = 653/925 (70%), Positives = 751/925 (81%), Gaps = 9/925 (0%)
 Frame = +1

Query: 280  MWRNIAKQVSSRTPSKLFRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFP 459
            MWRNI KQ  S   +   R+S S+ RT   +G+ Q  V+ DK +    FE  SS N  F 
Sbjct: 1    MWRNIVKQACST--NFFSRDSSSMLRTFGVVGYSQYPVFHDKARQ---FEFKSSINAGFS 55

Query: 460  ILGFQKIGDISTRDELL-------FRNQINLSGLC--PKSFXXXXXXXXXXXXXXQTDAE 612
               F + G+  ++++ L       FRN + LS     PK +               TDAE
Sbjct: 56   ESCFLRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLS------STDAE 109

Query: 613  EGNSVNSSIADDFQELLSEVRKEERRQYSTQWRNRRNIRGVGNEKYKTLRRRQVKIETEA 792
            E    + S+ D+ QELL E+ KEE+    +  +  + + G+G  KY  LRRRQVKIETEA
Sbjct: 110  E----DVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEA 165

Query: 793  WEQAAREYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAK 972
            WEQAA+EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA EQE  RKGK++AAYA 
Sbjct: 166  WEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAP 225

Query: 973  YFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXX 1152
            YFD LPA+MM+VITMHKL+ LLM GGEHG ARVVQAAC+IG AIE EVRI+ FL      
Sbjct: 226  YFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKK 285

Query: 1153 XXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKV 1332
                        SD  I+EQ++LR++VT LMKKQKL+ VRQIV  Q + +PWGQDA+AKV
Sbjct: 286  TDKDKKAEGGE-SDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKV 344

Query: 1333 GSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVR 1512
            GS LIEL++QTAYIQ PA+QLADGPPDIRPAF HT +T+TK+ + +SRRYG+I+CD LVR
Sbjct: 345  GSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVR 404

Query: 1513 KGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQL 1692
            KGLERTARHMVIPYMPMLVPP+ WTGYDKGAY++LPSYVMRTHGARQQRE+VKR  RKQL
Sbjct: 405  KGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQL 464

Query: 1693 RPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXX 1872
             P+FEALDTLG+T+WR+NKRVL ++DRIWASGG L DLVDR D+PLPE+P+TEDEA L  
Sbjct: 465  EPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKK 524

Query: 1873 XXXXXXXXXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHL 2052
                      ENSERHSQRCDTELKLAVAR+MK+E GFFYPHNLDFRGRAYPMHP+LNHL
Sbjct: 525  WKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHL 584

Query: 2053 GSDICRGILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSA 2232
            GSD+CRGILEF+EGRPLGKSGL WLKIHLANL+A GVDKL +EGRIAFTENHLDDIFDSA
Sbjct: 585  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 644

Query: 2233 DRPLEGKRWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALG 2412
            DRPLEG+RWWLNA+DPFQCLA CINL+EA+RS SPET ISHIP+HQDGSCNGLQHYAALG
Sbjct: 645  DRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALG 704

Query: 2413 RDKLGAAAVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKL 2592
            RDKLGAAAVNLVAG+KPADVYSG+A RVLDIM+ DAQKDP   P+A+ ARLLINQVDRKL
Sbjct: 705  RDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKL 764

Query: 2593 VKQTVMTSVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAAR 2772
            VKQTVMTSVYGVTYIGARDQIKRRLKER+AI D++E+FGA+CYAAK T+TALG+MF+AAR
Sbjct: 765  VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAAR 824

Query: 2773 SIMSWLGDCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMV 2952
            SIMSWLGDCAK+IA EN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMV
Sbjct: 825  SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 884

Query: 2953 KRQRTAFPPNFVHSLDGSHMMMTAI 3027
            KRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 885  KRQRTAFPPNFIHSLDGSHMMMTAV 909


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1297 bits (3357), Expect = 0.0
 Identities = 653/925 (70%), Positives = 751/925 (81%), Gaps = 9/925 (0%)
 Frame = +1

Query: 280  MWRNIAKQVSSRTPSKLFRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFP 459
            MWRNI KQ  S   +   R+S S+ RT   +G+ Q  V+ DK +    FE  SS N  F 
Sbjct: 1    MWRNIVKQACST--NFFSRDSSSMLRTFGVVGYSQYPVFHDKARQ---FEFKSSINAGFS 55

Query: 460  ILGFQKIGDISTRDELL-------FRNQINLSGLC--PKSFXXXXXXXXXXXXXXQTDAE 612
               F + G+  ++++ L       FRN + LS     PK +               TDAE
Sbjct: 56   ESCFLRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLS------STDAE 109

Query: 613  EGNSVNSSIADDFQELLSEVRKEERRQYSTQWRNRRNIRGVGNEKYKTLRRRQVKIETEA 792
            E    + S+ D+ QELL E+ KEE+    +  +  + + G+G  KY  LRRRQVKIETEA
Sbjct: 110  E----DVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEA 165

Query: 793  WEQAAREYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAK 972
            WEQAA+EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA EQE  RKGK++AAYA 
Sbjct: 166  WEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAP 225

Query: 973  YFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXX 1152
            YFD LPA+MM+VITMHKL+ LLM GGEHG ARVVQAAC+IG AIE EVRI+ FL      
Sbjct: 226  YFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKK 285

Query: 1153 XXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKV 1332
                        SD  I+EQ++LR++VT LMKKQKL+ VRQIV  Q + +PWGQDA+AKV
Sbjct: 286  TDKDKKAEGGE-SDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKV 344

Query: 1333 GSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVR 1512
            GS LIEL++QTAYIQ PA+QLADGPPDIRPAF HT +T+TK+ + +SRRYG+I+CD LVR
Sbjct: 345  GSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVR 404

Query: 1513 KGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQL 1692
            KGLERTARHMVIPYMPMLVPP+ WTGYDKGAY++LPSYVMRTHGARQQRE+VKR  RKQL
Sbjct: 405  KGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQL 464

Query: 1693 RPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXX 1872
             P+FEALDTLG+T+WR+NKRVL ++DRIWASGG L DLVDR D+PLPE+P+TEDEA L  
Sbjct: 465  EPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKK 524

Query: 1873 XXXXXXXXXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHL 2052
                      ENSERHSQRCDTELKLAVAR+MK+E GFFYPHNLDFRGRAYPMHP+LNHL
Sbjct: 525  WKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHL 584

Query: 2053 GSDICRGILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSA 2232
            GSD+CRGILEF+EGRPLGKSGL WLKIHLANL+A GVDKL +EGRIAFTENHLDDIFDSA
Sbjct: 585  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 644

Query: 2233 DRPLEGKRWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALG 2412
            DRPLEG+RWWLNA+DPFQCLA CINL+EA+RS SPET ISHIP+HQDGSCNGLQHYAALG
Sbjct: 645  DRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALG 704

Query: 2413 RDKLGAAAVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKL 2592
            RDKLGAAAVNLVAG+KPADVYSG+A RVLDIM+ DAQKDP   P+A+ ARLLINQVDRKL
Sbjct: 705  RDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKL 764

Query: 2593 VKQTVMTSVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAAR 2772
            VKQTVMTSVYGVTYIGARDQIKRRLKER+AI D++E+FGA+CYAAK T+TALG+MF+AAR
Sbjct: 765  VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAAR 824

Query: 2773 SIMSWLGDCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMV 2952
            SIMSWLGDCAK+IA EN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMV
Sbjct: 825  SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 884

Query: 2953 KRQRTAFPPNFVHSLDGSHMMMTAI 3027
            KRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 885  KRQRTAFPPNFIHSLDGSHMMMTAV 909


>ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Malus domestica]
          Length = 1025

 Score = 1297 bits (3356), Expect = 0.0
 Identities = 666/969 (68%), Positives = 756/969 (78%), Gaps = 17/969 (1%)
 Frame = +1

Query: 172  MCSSKTPFS-------FSFEIDGLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKL 330
            M  ++TPFS       F+F I      FHK     NP   ST +WRN+AKQ   R     
Sbjct: 1    MSCAQTPFSPANFTKNFTFRIP---IGFHK-----NPSMISTSLWRNLAKQAIPRNQRGR 52

Query: 331  FRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL 510
              NS S+SR  S L F  +SV P   K    F+L S SN+ FP +GF   G+IST +  L
Sbjct: 53   L-NSQSISRAYSLLCFSXESVSPQXFKP---FQLGSYSNMGFPEVGFPGKGEISTSESYL 108

Query: 511  -------FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSE 669
                    R  I  +G C K +               TDAEE    + S+ D+ QELL +
Sbjct: 109  GNPSYWSVRTPIGFNGFCAKGYASVAEVVS------STDAEE----DVSLVDEVQELLQQ 158

Query: 670  VRKEERRQYSTQWRNRR--NIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCE 843
            + KE +RQ +  WR  R   +RG+G  KY  L+RRQ+KIETEAWE+AA+EYREL+ DMCE
Sbjct: 159  MSKEGKRQ-TDHWRRMRLRRVRGMGQAKYLALKRRQIKIETEAWERAAKEYRELMMDMCE 217

Query: 844  QKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHK 1023
             KLAPNLPYMKSLFLGWFEP+RN I +EQ+  RKGK+KAAYA Y D LPADMM+VITMHK
Sbjct: 218  HKLAPNLPYMKSLFLGWFEPMRNAIEKEQDLCRKGKNKAAYAPYIDQLPADMMSVITMHK 277

Query: 1024 LMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNI 1203
            LM LLM  GEHG  RVV AAC IG+AIE EVRIH FL                  SD  +
Sbjct: 278  LMGLLMTXGEHGTCRVVAAACTIGEAIEHEVRIHNFLERTRKKKVNKDEENRV--SDDVL 335

Query: 1204 QEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1383
            +EQEKL ++VT LMKKQKL+ VR IV K    +PW QDA+AKVGSRLIEL++QTA+IQPP
Sbjct: 336  KEQEKLNKKVTNLMKKQKLQVVRHIVRKHDASKPWSQDARAKVGSRLIELLIQTAFIQPP 395

Query: 1384 ANQLADGPPDIRPAFVHTFRTVTKDIK-TSSRRYGVIQCDSLVRKGLERTARHMVIPYMP 1560
            A+QLADGPPDIRPAF+HTFRTV KD K TSSRR+GVIQCD LV KG E+T  H+VIPYMP
Sbjct: 396  ADQLADGPPDIRPAFIHTFRTVMKDPKNTSSRRFGVIQCDPLVLKGFEKTGSHLVIPYMP 455

Query: 1561 MLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWR 1740
            MLVPPV WTGYD+G Y +LPSYVMRTHGA+QQRE++KR PR+QL PVF+ALDTLG+TRW+
Sbjct: 456  MLVPPVNWTGYDRGGYFFLPSYVMRTHGAKQQREAIKRTPREQLEPVFKALDTLGNTRWK 515

Query: 1741 VNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERH 1920
            VNKRVL+++DRIWASGG L DLVDR+++PLPE+PDTEDE LL            EN ERH
Sbjct: 516  VNKRVLNVVDRIWASGGRLADLVDRDNVPLPEEPDTEDEKLLKKWKWKVKSVKKENMERH 575

Query: 1921 SQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRP 2100
            SQRCD ELKL VAR+MK+ EGF+YPHNLDFRGRAYPMHP+LNHLGSD+ RGILEF+EGRP
Sbjct: 576  SQRCDLELKLTVAREMKDAEGFYYPHNLDFRGRAYPMHPYLNHLGSDLSRGILEFAEGRP 635

Query: 2101 LGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDP 2280
            LGKSGL WLKIHLANL+A+GVDKL  EGRIAF ENHLDDIFDS DRPLEG+RWWL AEDP
Sbjct: 636  LGKSGLRWLKIHLANLYASGVDKLSREGRIAFIENHLDDIFDSVDRPLEGRRWWLKAEDP 695

Query: 2281 FQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK 2460
            FQCLA CINLAEA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAA+VNLVAGEK
Sbjct: 696  FQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEK 755

Query: 2461 PADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIG 2640
            PADVYSGIA RVLDIM+ DAQKDPAVFP+ALRA++L++QVDRKLVKQTVMTSVYGVTYIG
Sbjct: 756  PADVYSGIAARVLDIMRRDAQKDPAVFPEALRAKVLVDQVDRKLVKQTVMTSVYGVTYIG 815

Query: 2641 ARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAME 2820
            ARDQIKRRLKER  I DD E+FG ACYAAK+TLTALG+MFEAARSIMSWLG+CAK+IA E
Sbjct: 816  ARDQIKRRLKERGXISDDEELFGCACYAAKITLTALGEMFEAARSIMSWLGECAKIIASE 875

Query: 2821 NEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLD 3000
            NEPVRWTTPLGLPVVQPYRK GRHLIKTSLQVL+LQ E+DKVMVKRQRTAFPPNFVHSLD
Sbjct: 876  NEPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLSLQQETDKVMVKRQRTAFPPNFVHSLD 935

Query: 3001 GSHMMMTAI 3027
             SHMMMTA+
Sbjct: 936  SSHMMMTAV 944