BLASTX nr result
ID: Rehmannia27_contig00008950
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00008950
(1978 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015943031.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1087 0.0
gb|KRH37432.1| hypothetical protein GLYMA_09G066000 [Glycine max] 1078 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 1078 0.0
gb|KHN35874.1| DNA-directed RNA polymerase II subunit RPB2 [Glyc... 1076 0.0
ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II su... 1026 0.0
ref|XP_011096303.1| PREDICTED: DNA-directed RNA polymerase II su... 1021 0.0
emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata] 1021 0.0
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 1021 0.0
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 1021 0.0
ref|XP_009765276.1| PREDICTED: DNA-directed RNA polymerase II su... 1013 0.0
ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II su... 1013 0.0
ref|XP_009605281.1| PREDICTED: DNA-directed RNA polymerase II su... 1013 0.0
ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II su... 1013 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 1013 0.0
ref|XP_015066015.1| PREDICTED: DNA-directed RNA polymerase II su... 1012 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 1012 0.0
ref|XP_015889960.1| PREDICTED: DNA-directed RNA polymerase II su... 1012 0.0
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 1010 0.0
ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II su... 1009 0.0
gb|KDP20966.1| hypothetical protein JCGZ_21437 [Jatropha curcas] 1009 0.0
>ref|XP_015943031.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2 [Arachis duranensis]
Length = 1183
Score = 1087 bits (2810), Expect = 0.0
Identities = 559/697 (80%), Positives = 582/697 (83%), Gaps = 39/697 (5%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 439 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 498
Query: 183 GKLAXXXXXXXXXXXIQFLNSWRNGVLRTLRKYLLL*FLKQQRSLSMVVGLVFI------ 344
GKLA + G L L L VV +V+
Sbjct: 499 GKLAKPRQLHNSQWGMMCPAETPEGQACALXNLL-------HSLLXFVVKIVYFLLLXEI 551
Query: 345 -------ATLICXXXXXXXVVRD----IR-LKELR---------------------IYTD 425
AT I + RD +R L++LR IYTD
Sbjct: 552 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 611
Query: 426 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 605
YGRCSRPLFIV+KQRLLIKKKDI ALQQRESP++GGWHDLV+KG
Sbjct: 612 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 671
Query: 606 XXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 785
NDLV ARLNP EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 672 MTINDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 731
Query: 786 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 965
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 732 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 791
Query: 966 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1145
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 792 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 851
Query: 1146 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1325
LAPPGTRVSGEDVIIGKTTPI+ +EAQGQAARYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 852 LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYTRRDHSISLRHSETGIVDQVLLTTNAD 911
Query: 1326 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1505
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 912 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGISPDIIVNPHAIPS 971
Query: 1506 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1685
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 972 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1031
Query: 1686 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1865
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1032 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1091
Query: 1866 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
AHGAAHFLKERLFDQSDAYR+HVCE+CGLIAIANLKK
Sbjct: 1092 AHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKK 1128
>gb|KRH37432.1| hypothetical protein GLYMA_09G066000 [Glycine max]
Length = 889
Score = 1078 bits (2788), Expect = 0.0
Identities = 557/701 (79%), Positives = 584/701 (83%), Gaps = 43/701 (6%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 136 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 195
Query: 183 GKLAXXXXXXXXXXXIQFLNSWRNGVLRTLRK--------------YLLL*FLKQ---QR 311
GKLA + G L K Y +L FL++ +
Sbjct: 196 GKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 255
Query: 312 SLSMVVGLVFIATLICXXXXXXXVVRD----IR-LKELRIYTD----------------- 425
+ ++ AT I + RD +R LK+LR D
Sbjct: 256 FEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELR 315
Query: 426 ----YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXX 593
YGRCSRPLFIV+KQRLLIKKKDI ALQQRESP+DGGWHDLV+KG
Sbjct: 316 IYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEET 375
Query: 594 XXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 773
NDLV AR+NP +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM
Sbjct: 376 TMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 435
Query: 774 GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGY 953
GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGY
Sbjct: 436 GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGY 495
Query: 954 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL 1133
NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL
Sbjct: 496 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL 555
Query: 1134 DDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLT 1313
DDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA RYT+RDHS SLRHSETG+VDQVLLT
Sbjct: 556 DDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLT 615
Query: 1314 TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPH 1493
TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPH
Sbjct: 616 TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 675
Query: 1494 AIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1673
AIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG
Sbjct: 676 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 735
Query: 1674 HTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1853
HTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER
Sbjct: 736 HTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 795
Query: 1854 DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 796 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 836
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max] gi|947088766|gb|KRH37431.1| hypothetical protein
GLYMA_09G066000 [Glycine max]
Length = 1192
Score = 1078 bits (2788), Expect = 0.0
Identities = 557/701 (79%), Positives = 584/701 (83%), Gaps = 43/701 (6%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 439 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 498
Query: 183 GKLAXXXXXXXXXXXIQFLNSWRNGVLRTLRK--------------YLLL*FLKQ---QR 311
GKLA + G L K Y +L FL++ +
Sbjct: 499 GKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 558
Query: 312 SLSMVVGLVFIATLICXXXXXXXVVRD----IR-LKELRIYTD----------------- 425
+ ++ AT I + RD +R LK+LR D
Sbjct: 559 FEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELR 618
Query: 426 ----YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXX 593
YGRCSRPLFIV+KQRLLIKKKDI ALQQRESP+DGGWHDLV+KG
Sbjct: 619 IYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEET 678
Query: 594 XXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 773
NDLV AR+NP +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM
Sbjct: 679 TMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 738
Query: 774 GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGY 953
GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGY
Sbjct: 739 GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGY 798
Query: 954 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL 1133
NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL
Sbjct: 799 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL 858
Query: 1134 DDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLT 1313
DDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA RYT+RDHS SLRHSETG+VDQVLLT
Sbjct: 859 DDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLT 918
Query: 1314 TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPH 1493
TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPH
Sbjct: 919 TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 978
Query: 1494 AIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1673
AIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG
Sbjct: 979 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1038
Query: 1674 HTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1853
HTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER
Sbjct: 1039 HTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1098
Query: 1854 DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1099 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1139
>gb|KHN35874.1| DNA-directed RNA polymerase II subunit RPB2 [Glycine soja]
Length = 1192
Score = 1076 bits (2782), Expect = 0.0
Identities = 556/701 (79%), Positives = 583/701 (83%), Gaps = 43/701 (6%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 439 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 498
Query: 183 GKLAXXXXXXXXXXXIQFLNSWRNGVLRTLRK--------------YLLL*FLKQ---QR 311
GK A + G L K Y +L FL++ +
Sbjct: 499 GKSAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 558
Query: 312 SLSMVVGLVFIATLICXXXXXXXVVRD----IR-LKELRIYTD----------------- 425
+ ++ AT I + RD +R LK+LR D
Sbjct: 559 FEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELR 618
Query: 426 ----YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXX 593
YGRCSRPLFIV+KQRLLIKKKDI ALQQRESP+DGGWHDLV+KG
Sbjct: 619 IYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEET 678
Query: 594 XXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 773
NDLV AR+NP +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM
Sbjct: 679 TMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 738
Query: 774 GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGY 953
GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGY
Sbjct: 739 GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGY 798
Query: 954 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL 1133
NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL
Sbjct: 799 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKL 858
Query: 1134 DDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLT 1313
DDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA RYT+RDHS SLRHSETG+VDQVLLT
Sbjct: 859 DDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLT 918
Query: 1314 TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPH 1493
TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPH
Sbjct: 919 TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 978
Query: 1494 AIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1673
AIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG
Sbjct: 979 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1038
Query: 1674 HTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1853
HTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER
Sbjct: 1039 HTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1098
Query: 1854 DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1099 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1139
>ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Erythranthe
guttata] gi|604344639|gb|EYU43393.1| hypothetical protein
MIMGU_mgv1a000385mg [Erythranthe guttata]
Length = 1197
Score = 1026 bits (2652), Expect = 0.0
Identities = 506/533 (94%), Positives = 510/533 (95%), Gaps = 1/533 (0%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKG
Sbjct: 610 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGF 669
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLVSAR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 670 IEYIDTEEEETTMISMTINDLVSARINPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 729
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 730 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 789
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 790 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 849
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQA-ARYTKRDHSTSLRH 1277
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI PDEAQGQA ARYTKRDHSTSLRH
Sbjct: 850 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTKRDHSTSLRH 909
Query: 1278 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 1457
SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL
Sbjct: 910 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 969
Query: 1458 EGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1637
EGI PDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG
Sbjct: 970 EGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1029
Query: 1638 YQMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1817
YQMRG+ETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 1030 YQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1089
Query: 1818 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKK
Sbjct: 1090 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIANLKK 1142
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 441 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 500
Query: 183 GKLA 194
GKLA
Sbjct: 501 GKLA 504
Score = 100 bits (250), Expect = 2e-18
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML
Sbjct: 547 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 591
>ref|XP_011096303.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Sesamum
indicum]
Length = 1193
Score = 1021 bits (2641), Expect = 0.0
Identities = 500/532 (93%), Positives = 511/532 (96%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI+ALQQRESP+DGGWHDLVAKG
Sbjct: 607 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPEDGGWHDLVAKGF 666
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
DLV+ARLNP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 667 IEYIDTEEEETTMISMTIGDLVNARLNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 726
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 727 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 786
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 787 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 846
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+PD+AQGQAARYTKRDHSTSLRHS
Sbjct: 847 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHS 906
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE
Sbjct: 907 ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 966
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 967 GITPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1026
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1027 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1086
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKK
Sbjct: 1087 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKK 1138
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 438 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 497
Query: 183 GKLA 194
GKLA
Sbjct: 498 GKLA 501
Score = 99.4 bits (246), Expect = 6e-18
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENF+EISPAVIPQATKIFVNGCWVGIHRNPDML
Sbjct: 544 YPILEFLEEWGTENFKEISPAVIPQATKIFVNGCWVGIHRNPDML 588
>emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata]
Length = 629
Score = 1021 bits (2640), Expect = 0.0
Identities = 505/533 (94%), Positives = 508/533 (95%), Gaps = 1/533 (0%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKG
Sbjct: 90 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGF 149
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLVSARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 150 IEYIDTEEEETTMISMTINDLVSARLNPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 209
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 210 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 269
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR E KKMGTLVKEDFGRPDRANT
Sbjct: 270 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEXKKMGTLVKEDFGRPDRANT 329
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQA-ARYTKRDHSTSLRH 1277
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI PDEAQGQA ARYTKRDHSTSLRH
Sbjct: 330 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTKRDHSTSLRH 389
Query: 1278 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 1457
SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL
Sbjct: 390 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 449
Query: 1458 EGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1637
EGI PDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG
Sbjct: 450 EGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 509
Query: 1638 YQMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1817
YQMRG+ETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 510 YQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 569
Query: 1818 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKK
Sbjct: 570 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIANLKK 622
Score = 100 bits (250), Expect = 1e-18
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML
Sbjct: 27 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 71
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 1021 bits (2640), Expect = 0.0
Identities = 499/532 (93%), Positives = 509/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQALQQRE+P+DGGWHDLVAKG
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDV+IGKTTPIA DEAQG AARYT+RDHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHS 904
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTME 964
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+LTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1136
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 436 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 495
Query: 183 GKLA 194
GKLA
Sbjct: 496 GKLA 499
Score = 99.0 bits (245), Expect = 8e-18
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDML
Sbjct: 542 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDML 586
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 1021 bits (2639), Expect = 0.0
Identities = 497/532 (93%), Positives = 511/532 (96%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKD+QALQQRESPDDGGWH+LVAKG
Sbjct: 614 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGF 673
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDL+SA++NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 674 IEYIDTEEEETTMISMTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 733
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 734 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 793
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NT
Sbjct: 794 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 853
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+PD+AQGQAARYTKRDHSTSLRHS
Sbjct: 854 MGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHS 913
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 914 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 973
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 974 GISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1033
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L+SMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1034 QMRGFETMYNGHTGRRLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1093
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKK
Sbjct: 1094 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKK 1145
Score = 124 bits (312), Expect = 6e-26
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QF IKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRL+SPIGRE
Sbjct: 445 QFXIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLBSPIGRE 504
Query: 183 GKLA 194
GKLA
Sbjct: 505 GKLA 508
Score = 97.1 bits (240), Expect = 3e-17
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHRNPDML
Sbjct: 551 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGLWVGIHRNPDML 595
>ref|XP_009765276.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Nicotiana sylvestris]
Length = 1094
Score = 1013 bits (2619), Expect = 0.0
Identities = 493/532 (92%), Positives = 508/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRESP++GGWHDLVAKG
Sbjct: 508 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGY 567
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 568 IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 627
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 628 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 687
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 688 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 747
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 748 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 807
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 808 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 867
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 868 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 927
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 928 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 987
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 988 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1039
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 339 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 398
Query: 183 GKLA 194
GKLA
Sbjct: 399 GKLA 402
Score = 95.1 bits (235), Expect = 1e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+PDML
Sbjct: 445 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDML 489
>ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana sylvestris]
Length = 1191
Score = 1013 bits (2619), Expect = 0.0
Identities = 493/532 (92%), Positives = 508/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRESP++GGWHDLVAKG
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGY 664
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 785 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 844
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 904
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 436 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 495
Query: 183 GKLA 194
GKLA
Sbjct: 496 GKLA 499
Score = 95.1 bits (235), Expect = 1e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+PDML
Sbjct: 542 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDML 586
>ref|XP_009605281.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Nicotiana tomentosiformis]
Length = 1094
Score = 1013 bits (2619), Expect = 0.0
Identities = 493/532 (92%), Positives = 508/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRESP++GGWHDLVAKG
Sbjct: 508 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGY 567
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 568 IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 627
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 628 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 687
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 688 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 747
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 748 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 807
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 808 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 867
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 868 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 927
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 928 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 987
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 988 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1039
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 339 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 398
Query: 183 GKLA 194
GKLA
Sbjct: 399 GKLA 402
Score = 95.1 bits (235), Expect = 1e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+PDML
Sbjct: 445 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDML 489
>ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 1013 bits (2619), Expect = 0.0
Identities = 493/532 (92%), Positives = 508/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRESP++GGWHDLVAKG
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGY 664
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 785 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 844
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 904
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 436 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 495
Query: 183 GKLA 194
GKLA
Sbjct: 496 GKLA 499
Score = 95.1 bits (235), Expect = 1e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+PDML
Sbjct: 542 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDML 586
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 1013 bits (2618), Expect = 0.0
Identities = 492/532 (92%), Positives = 508/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRESPD+GGWHDLVAKG
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGY 664
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARLNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 785 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 844
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 904
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 436 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 495
Query: 183 GKLA 194
GKLA
Sbjct: 496 GKLA 499
Score = 95.1 bits (235), Expect = 1e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+PDML
Sbjct: 542 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDML 586
>ref|XP_015066015.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
pennellii]
Length = 1191
Score = 1012 bits (2617), Expect = 0.0
Identities = 492/532 (92%), Positives = 507/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRESPD+GGWHDLVAKG
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGY 664
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARLNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA T
Sbjct: 785 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATT 844
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 904
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 436 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 495
Query: 183 GKLA 194
GKLA
Sbjct: 496 GKLA 499
Score = 95.1 bits (235), Expect = 1e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+PDML
Sbjct: 542 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDML 586
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
tuberosum]
Length = 1191
Score = 1012 bits (2617), Expect = 0.0
Identities = 492/532 (92%), Positives = 507/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRESPD+GGWHDLVAKG
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGY 664
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARLNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA T
Sbjct: 785 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATT 844
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 904
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 436 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 495
Query: 183 GKLA 194
GKLA
Sbjct: 496 GKLA 499
Score = 95.1 bits (235), Expect = 1e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+PDML
Sbjct: 542 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDML 586
>ref|XP_015889960.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ziziphus
jujuba]
Length = 1191
Score = 1012 bits (2616), Expect = 0.0
Identities = 496/533 (93%), Positives = 507/533 (95%), Gaps = 1/533 (0%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLV+KG
Sbjct: 604 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGF 663
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV AR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 664 IEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 723
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 724 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 783
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 784 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 843
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAA-RYTKRDHSTSLRH 1277
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA DEAQGQAA RYT+RDHS SLRH
Sbjct: 844 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSISLRH 903
Query: 1278 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 1457
SETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+
Sbjct: 904 SETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV 963
Query: 1458 EGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1637
EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALH+CG
Sbjct: 964 EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHRCG 1023
Query: 1638 YQMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1817
YQMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 1024 YQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1083
Query: 1818 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1084 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 435 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 494
Query: 183 GKLA 194
GKLA
Sbjct: 495 GKLA 498
Score = 99.0 bits (245), Expect = 8e-18
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDML
Sbjct: 541 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDML 585
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Citrus
sinensis]
Length = 1195
Score = 1010 bits (2612), Expect = 0.0
Identities = 493/532 (92%), Positives = 506/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI ALQQRESP+DGGWHDLVAKG
Sbjct: 608 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGF 667
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
NDLV ARL+P EAY+DTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 668 IEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHN 727
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 728 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 787
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NT
Sbjct: 788 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 847
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ DEAQGQA+RYT+RDHS SLRHS
Sbjct: 848 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHS 907
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 908 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK
Sbjct: 1088 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKK 1139
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 439 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 498
Query: 183 GKLA 194
GKLA
Sbjct: 499 GKLA 502
Score = 97.4 bits (241), Expect = 2e-17
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+P+ML
Sbjct: 545 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEML 589
>ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
curcas]
Length = 1193
Score = 1009 bits (2610), Expect = 0.0
Identities = 493/532 (92%), Positives = 506/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGWHDLVAKG
Sbjct: 607 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGF 666
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
+DLV AR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 667 IEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 726
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 727 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 786
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 787 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 846
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHS
Sbjct: 847 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHS 906
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 907 ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 966
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 967 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1026
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1027 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1086
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1087 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1138
Score = 127 bits (319), Expect = 8e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 438 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 497
Query: 183 GKLA 194
GKLA
Sbjct: 498 GKLA 501
Score = 99.0 bits (245), Expect = 8e-18
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDML
Sbjct: 544 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDML 588
>gb|KDP20966.1| hypothetical protein JCGZ_21437 [Jatropha curcas]
Length = 841
Score = 1009 bits (2610), Expect = 0.0
Identities = 493/532 (92%), Positives = 506/532 (95%)
Frame = +3
Query: 381 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 560
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGWHDLVAKG
Sbjct: 255 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGF 314
Query: 561 XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 740
+DLV AR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 315 IEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 374
Query: 741 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 920
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 375 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 434
Query: 921 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1100
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 435 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 494
Query: 1101 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 1280
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHS
Sbjct: 495 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHS 554
Query: 1281 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1460
ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 555 ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 614
Query: 1461 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1640
GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 615 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 674
Query: 1641 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1820
QMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 675 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 734
Query: 1821 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1976
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 735 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 786
Score = 127 bits (319), Expect = 6e-27
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +3
Query: 3 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 182
QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE
Sbjct: 86 QFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 145
Query: 183 GKLA 194
GKLA
Sbjct: 146 GKLA 149
Score = 99.0 bits (245), Expect = 6e-18
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +2
Query: 227 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDML 361
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDML
Sbjct: 192 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDML 236