BLASTX nr result
ID: Rehmannia27_contig00007627
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00007627
(5407 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su... 2994 0.0
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su... 2971 0.0
ref|XP_011073958.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2955 0.0
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2907 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2904 0.0
ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II su... 2902 0.0
ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II su... 2895 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2873 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2850 0.0
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 2824 0.0
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2824 0.0
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 2816 0.0
ref|XP_015889758.1| PREDICTED: DNA-directed RNA polymerase II su... 2815 0.0
ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su... 2813 0.0
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 2812 0.0
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 2812 0.0
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 2812 0.0
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 2812 0.0
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2809 0.0
ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 2809 0.0
>ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2994 bits (7762), Expect = 0.0
Identities = 1491/1537 (97%), Positives = 1517/1537 (98%), Gaps = 2/1537 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFP+SPAEVAK+RVVQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMA+CPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADEEDPK
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 770
FKQA+RIRNPKNRL+KILDACKNKSKCEGGDEIDVQGQD+ EP+KK+RGGCGAQQPKISI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKMVAEYK+QKKKNDDPEQMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLRYSAWHQE+EKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
LESLKLK+ DFNDMY+YEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR+Q
Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTGDNSWPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEN+GFKA
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYME-GGLDFGMTPARSPLTG 4727
LRGVTENIMLGQLAPIGTGDCAL LNEEMLKQAIEIPLPSYME GGL+FGMTPARSPLTG
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500
Query: 4728 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
TPYHDGMMSP+YLLSPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 TPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttata] gi|604343422|gb|EYU42342.1| hypothetical protein
MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 2971 bits (7701), Expect = 0.0
Identities = 1482/1537 (96%), Positives = 1505/1537 (97%), Gaps = 2/1537 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADEE+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQAMRIRNPKNRLRKILDACKNK+KC+GGDEID QD+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKMVAEYKLQKKK+DD +QMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLRYSAWHQE EKGFITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
LESLKLK++DFNDMYKYEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEV KLE DRFQ
Sbjct: 901 LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDDYLS EAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
PDVSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
N++APKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
ENEWMLDTEGVNLLAVMCHE+VD RRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTGDCALLLNE+MLKQAIEIPLPSYMEGGL+FGMTP RSP +GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGT 1500
Query: 4731 PYHDGMMSPNYLL-SPNLRLSPVTDAQFSPYVGGMAF 4838
PYHDGMMSPNYLL SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 PYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_011073958.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1-like [Sesamum indicum]
Length = 1843
Score = 2955 bits (7660), Expect = 0.0
Identities = 1468/1540 (95%), Positives = 1507/1540 (97%), Gaps = 5/1540 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIG----GLSDPR 401
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ET ERGKPKIG GLSD R
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIISPDEIRQMSVVHIEHGETMERGKPKIGMXICGLSDLR 60
Query: 402 LGTIDRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADE 581
LGTI +KMKCETCM+NMAECPGHFGHLELAKPMFHIGFMK VLSILRSVCFNCSKILADE
Sbjct: 61 LGTIGKKMKCETCMSNMAECPGHFGHLELAKPMFHIGFMKVVLSILRSVCFNCSKILADE 120
Query: 582 EDPKFKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQD-SEPLKKSRGGCGAQQP 758
+DPKFKQAMRIRNPKNRLRKILDACKNKSKC+GGDEIDV+GQ+ EP+KKSRGGCGAQQP
Sbjct: 121 DDPKFKQAMRIRNPKNRLRKILDACKNKSKCDGGDEIDVRGQEPDEPVKKSRGGCGAQQP 180
Query: 759 KISIDGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 938
KISIDGMKMVAEYK+QKKKNDD +QMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP
Sbjct: 181 KISIDGMKMVAEYKIQKKKNDDQDQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 240
Query: 939 KYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPA 1118
KYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK QERNGAPA
Sbjct: 241 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKLQERNGAPA 300
Query: 1119 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 1298
HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD
Sbjct: 301 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 360
Query: 1299 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAK 1478
FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAK
Sbjct: 361 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAK 420
Query: 1479 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 1658
YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM
Sbjct: 421 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 480
Query: 1659 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGI 1838
PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELM+VPKCIVSPQ+NRPVMGI
Sbjct: 481 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVMELMLVPKCIVSPQSNRPVMGI 540
Query: 1839 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP 2018
VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIP
Sbjct: 541 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIP 600
Query: 2019 KQINLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVG 2198
KQINLLRYSAWHQE EKG+ITPGDTQVRIEKG+LLSGTLCKK LGTSTGSLIHVIWEEVG
Sbjct: 601 KQINLLRYSAWHQETEKGYITPGDTQVRIEKGDLLSGTLCKKALGTSTGSLIHVIWEEVG 660
Query: 2199 PDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQ 2378
PDAARKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETISNAKN+VKELIRAAQ
Sbjct: 661 PDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNQVKELIRAAQ 720
Query: 2379 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 2558
EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI
Sbjct: 721 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 780
Query: 2559 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAM 2738
SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAM
Sbjct: 781 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM 840
Query: 2739 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWI 2918
GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWI
Sbjct: 841 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 900
Query: 2919 ESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEA 3098
ESQPLESLKLK++DFNDMYKYEID+ NWNP+YMLPEAVEDLKTIREIRSVFDAEVQKLEA
Sbjct: 901 ESQPLESLKLKKSDFNDMYKYEIDSTNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEA 960
Query: 3099 DRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 3278
DR+QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL
Sbjct: 961 DRYQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 1020
Query: 3279 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSL 3458
KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSL
Sbjct: 1021 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL 1080
Query: 3459 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 3638
VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS
Sbjct: 1081 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 1140
Query: 3639 VYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMP 3818
VYL+PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMP
Sbjct: 1141 VYLRPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP 1200
Query: 3819 DEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILR 3998
DEEIDP KISPWLLR+ELNREMMVDKKLSMADIAEKINLEF+DDLTCIFNDDNAEKLILR
Sbjct: 1201 DEEIDPHKISPWLLRVELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILR 1260
Query: 3999 IRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEND 4178
IRIMNDEAPKGEL DESAEDDVFLKK+ESNMLTEMALRGIPDINKVFIKN K+NKFDEN+
Sbjct: 1261 IRIMNDEAPKGELQDESAEDDVFLKKVESNMLTEMALRGIPDINKVFIKNGKVNKFDENE 1320
Query: 4179 GFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 4358
GFKAENEWMLDTEGVNLLAV CHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVI
Sbjct: 1321 GFKAENEWMLDTEGVNLLAVACHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 1380
Query: 4359 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 4538
SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA
Sbjct: 1381 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 1440
Query: 4539 ETDCLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSP 4718
E DCLRGVTENIMLGQLAPIGTGDC LLLNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP
Sbjct: 1441 EMDCLRGVTENIMLGQLAPIGTGDCGLLLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP 1500
Query: 4719 LTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
+TGTPYHDGMMSP+YLLSPNLRLSPV+DAQFSPYVGGMAF
Sbjct: 1501 VTGTPYHDGMMSPSYLLSPNLRLSPVSDAQFSPYVGGMAF 1540
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
lycopersicum] gi|970009512|ref|XP_015065639.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 [Solanum
pennellii]
Length = 1846
Score = 2907 bits (7536), Expect = 0.0
Identities = 1442/1536 (93%), Positives = 1492/1536 (97%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK K+ F+DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
tuberosum]
Length = 1839
Score = 2904 bits (7529), Expect = 0.0
Identities = 1440/1536 (93%), Positives = 1491/1536 (97%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQG D+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK K+ F+DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
tomentosiformis]
Length = 1846
Score = 2902 bits (7522), Expect = 0.0
Identities = 1441/1536 (93%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK K+ F+DMY YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
sylvestris]
Length = 1846
Score = 2895 bits (7505), Expect = 0.0
Identities = 1438/1536 (93%), Positives = 1493/1536 (97%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK K++ F+D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PY DGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYPDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2873 bits (7449), Expect = 0.0
Identities = 1421/1536 (92%), Positives = 1485/1536 (96%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 770
FKQA +IRNPKNRL+KILDACKNKSKCEGGDEI+ Q DS EP+KKSRGGCGAQQPK++I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
+GMKM+AEYK+Q+KKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLR SAWH E+E GFITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+K+ +F+ ++KYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADRFQ
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AIE+ LPSYME GLDFGMTP+RSP+TGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYHDGMMSPNYLLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2850 bits (7389), Expect = 0.0
Identities = 1405/1536 (91%), Positives = 1482/1536 (96%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD RFP+SPAEV+KVR VQFGILSPD IRQMSVV IEHSETTE+GKPK GGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 770
FKQA RIRNPKNRL+K+LDACKNK+KCEGGDEI+VQGQD+ EP+KK RGGCGAQQPK++I
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
+GMKM+AEYK Q+KKNDD EQ+PEPVERKQ LSAE+VLS+LKRI+DEDC LLGLNP+YAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
+DGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
L+R SAWH E+E GFITPGDTQVRIE+GELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+++++F+ +++YEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTGDN+WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDC
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME GLDFGMTP+RSP+ GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPIMGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PY++GMMSP+YLLSPN RLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 2824 bits (7320), Expect = 0.0
Identities = 1394/1536 (90%), Positives = 1468/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+I+RSVCFNCSKIL DEEDPK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA+RI+NPKNRLRKILDACKNK+KCEGGDEIDVQGQDS+ P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
+GMKM AEYK Q+KKNDDPEQ+PEPVERKQ L+AE+VL ILKRITDEDC+LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
L R SAWH E+E G ITPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+K+ +F +++YE ++ NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR+Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTG+NSWP+PVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
G+D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+ +KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+NKFDEN+GFK
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTG CAL LN+EMLK AIE+ LPSY++ GLDFGMTP+RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYH+GMMSPNYLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1837
Score = 2824 bits (7320), Expect = 0.0
Identities = 1392/1536 (90%), Positives = 1469/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+I+RSVCFNCSKIL DEEDPK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA+RI+NPKNRLRKILDACKNK+KCEGGDEIDVQGQDS+ P+KKSRGGCGAQQPKI+I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
+GMKM AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VL ILKRITD+DC+LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFI KDVFMNILMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
L R SAWH E+E G +TPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+K+ +F +++YE ++ NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR+Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTG+NSWP+PVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
G+D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+ +KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+NKFDEN+GFK
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTG CAL LN+EMLK AIE+ LPSY++ GLDFGMTP+RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYH+GMMSPNYLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2816 bits (7301), Expect = 0.0
Identities = 1387/1537 (90%), Positives = 1470/1537 (95%), Gaps = 2/1537 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEHSET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL+I+R VCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS--EPLKKSRGGCGAQQPKIS 767
FKQA++IRNPK+RL++I DACK K KC GGD+IDVQ Q EP+KKSRGGCGAQQP I+
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 768 IDGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYA 947
IDGMKM+AEYK KKK+DD EQ+PEPVERKQ+LSAE+VLS+LKRI+DEDC LLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 948 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 1127
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1128 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1307
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1308 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYII 1487
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1488 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1667
R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1668 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1847
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1848 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 2027
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 2028 NLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2207
NL+R SAWH E E GFITPGDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2208 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQ 2387
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKN+VKELI+ AQEKQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2388 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2567
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2568 TACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2747
TACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2748 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2927
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2928 PLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRF 3107
L+SLK+K++DF+ ++KYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR+
Sbjct: 901 KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 3108 QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 3287
QLGTEIATTGDN+WPLPVN+KRL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3288 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAA 3467
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3468 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3647
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3648 KPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEE 3827
KP+V+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMST+IEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3828 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 4007
I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 4008 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFK 4187
MNDEAPKGEL DESAEDDVFLK+IESNMLTEMALRGIPDINKVFIK+ K+N+FDEN+GFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 4188 AENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 4367
A+ EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4368 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 4547
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440
Query: 4548 CLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTG 4727
LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME GL+FGMTP+RSP++G
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLEFGMTPSRSPISG 1499
Query: 4728 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
TPYH+GMMSP+YLLSPN+R SP+TDAQFSPYVGGM F
Sbjct: 1500 TPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>ref|XP_015889758.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ziziphus jujuba]
Length = 1851
Score = 2815 bits (7296), Expect = 0.0
Identities = 1384/1536 (90%), Positives = 1471/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD+RFPFSPAE+AKVR+VQFGILSPDEIRQMSV+ IEHSET GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRK+KC+TC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKIL DEED K
Sbjct: 61 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA+RI+NPKNRL+KILDACKNK+KCEGGDEI VQGQ+SE P+KKSRGGCGAQQPK SI
Sbjct: 121 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKM+AEYK Q+KK+DD EQ+PEPVERKQ L+AE+VLS+LKRI+DEDC+LLGL+PKYAR
Sbjct: 181 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
L R S+WH E+E G ITPGDT VRIEKGELL GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+ AKN+VKELIR AQ + L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMMESFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+K+T+F+ ++KYE D+ NWNPNYM+PE ++DLKTIRE R+VFDAEVQKL+ DRFQ
Sbjct: 901 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTGDNSWPLPVN+KRL+ NAQKTFK+D+RR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDD LS+EAQKNATLFFNILLRS ASKRVL+EYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+ +KTKERAKNVQCALEYTTLRSVTQATEVWYDPDP STLIEEDV+FV+SYYEMPDEEI
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTLIEEDVDFVRSYYEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDE+PKG++NDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K+NKFDE +GFK
Sbjct: 1261 NDESPKGDMNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFDEIEGFKP 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAERDY 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTGDC+L LN+EMLK AIE+ LPSYM+ GLDFGMTP+RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYH+G+MSP+YLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 PYHEGLMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] gi|629090320|gb|KCW56573.1| hypothetical protein
EUGRSUZ_I02304 [Eucalyptus grandis]
Length = 1852
Score = 2813 bits (7292), Expect = 0.0
Identities = 1384/1536 (90%), Positives = 1465/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPKI GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSI+R VCFNCSKIL DE+D K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA+RIRNPKNRL+KILDACKNKSKC+GGD++D +GQ SE P KK+ GGCGAQQPK++I
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
+GMKM+AEYK Q+KKNDD +Q+PEPVERKQ LSAE+VLS+LKRI+DE CQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMN+LMWWEDFDGKVP PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLR SAWH E E GFITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS+AK+EVK LI+ AQEK+L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
E EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+K+T+F+ +++YEID+ NWNP+YMLPE EDL++I E+R VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKKTEFDRVFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIATTGDN+WPLPVN+KRL+ NAQKTFK+D RRPSD+HP+E+VEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
G+D LS+EAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+VSKTKE AK VQCALEYTTLRSVTQATEVWYDPDP ST IEED++FVKSY EMPDEEI
Sbjct: 1141 PEVSKTKENAKTVQCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEI 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
NDE PKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K+NKF+ENDGFK
Sbjct: 1261 NDEVPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKP 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAVMCHE VDA RTTSNHLIE+IEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ GLDFGMTPARSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYMD-GLDFGMTPARSPISGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYH+GMMSP+YLLSPNLRLSP TDAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPNLRLSPTTDAQFSPYVGGMAF 1535
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2812 bits (7290), Expect = 0.0
Identities = 1384/1537 (90%), Positives = 1469/1537 (95%), Gaps = 2/1537 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL+I+R VCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS--EPLKKSRGGCGAQQPKIS 767
FKQA++IRNPK+RL++I DACK K KC GGD+IDVQ Q EP+KKSRGGCGAQQP I+
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 768 IDGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYA 947
IDGMKM+AEYK KKK+DD EQ+PEPVERKQ+LSAE+VLS+LKRI+DEDC LLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 948 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 1127
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1128 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1307
+EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1308 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYII 1487
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1488 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1667
R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1668 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1847
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1848 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 2027
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 2028 NLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2207
NL+R SAWH E E GFITPGDT VRIEKGELLSGTLCK+TLGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 2208 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQ 2387
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKN+VKELI+ AQEKQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2388 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2567
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2568 TACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2747
TACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2748 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2927
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2928 PLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRF 3107
L+SLK+K+++F+ +KYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR+
Sbjct: 901 KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 3108 QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 3287
QLGTEIATTGDN+WPLPVN+KRL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3288 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAA 3467
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3468 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3647
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3648 KPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEE 3827
KP+V+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMST+IEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3828 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 4007
I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 4008 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFK 4187
MNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+N+FD+N+GFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320
Query: 4188 AENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 4367
A+ EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4368 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 4547
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
Query: 4548 CLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTG 4727
LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME GLDFGMTP+RSP++G
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPISG 1499
Query: 4728 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
TPYH+GMMSP+YLLSPN+R SP+TDAQFSPYVGGMAF
Sbjct: 1500 TPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 2812 bits (7289), Expect = 0.0
Identities = 1387/1537 (90%), Positives = 1476/1537 (96%), Gaps = 2/1537 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFP+SPAEVAKVRVVQFGILSPDEIRQMSVV IEHSETTERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA++I+NPKNRL+KILDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPK++I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKM+AEYK Q+KKNDDPEQ+PEPVERKQ L+AE+VLS+LKRI+DEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLR SAWH E+E G ITPGDTQVRIEKGE+LSGTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AK++VK+LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNP-NYMLPEAVEDLKTIREIRSVFDAEVQKLEADRF 3107
L+SLK+K+++F+ +++Y+ID+ NWNP +YMLPE +EDL+TI+E+R VFDAEV KLEADR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 3108 QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 3287
QLGTEIA TGD++WPLPVN+KRL+ NAQKTFKVDFRR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 3288 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAA 3467
G D LS+EAQKNATLFF ILLRS LASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVA
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 3468 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3647
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3648 KPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEE 3827
P+ SKTKE+AKNVQCALEYTTLRSVT ATEVWYDPDPMST+IEED++FVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 3828 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 4007
+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 4008 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFK 4187
MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+SK +KFDE DG+K
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 4188 AENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 4367
EW+LDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4368 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 4547
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 4548 CLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTG 4727
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYME GL+FGMTPARSP++G
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSG 1499
Query: 4728 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
TPYH+GMMSP+YLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 TPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 2812 bits (7289), Expect = 0.0
Identities = 1387/1537 (90%), Positives = 1476/1537 (96%), Gaps = 2/1537 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFP+SPAEVAKVRVVQFGILSPDEIRQMSVV IEHSETTERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA++I+NPKNRL+KILDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPK++I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKM+AEYK Q+KKNDDPEQ+PEPVERKQ L+AE+VLS+LKRI+DEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLR SAWH E+E G ITPGDTQVRIEKGE+LSGTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AK++VK+LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNP-NYMLPEAVEDLKTIREIRSVFDAEVQKLEADRF 3107
L+SLK+K+++F+ +++Y+ID+ NWNP +YMLPE +EDL+TI+E+R VFDAEV KLEADR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 3108 QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 3287
QLGTEIA TGD++WPLPVN+KRL+ NAQKTFKVDFRR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 3288 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAA 3467
G D LS+EAQKNATLFF ILLRS LASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVA
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 3468 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3647
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3648 KPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEE 3827
P+ SKTKE+AKNVQCALEYTTLRSVT ATEVWYDPDPMST+IEED++FVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 3828 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 4007
+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 4008 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFK 4187
MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+SK +KFDE DG+K
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 4188 AENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 4367
EW+LDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4368 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 4547
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 4548 CLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTG 4727
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYME GL+FGMTPARSP++G
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSG 1499
Query: 4728 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
TPYH+GMMSP+YLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 TPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1
isoform X1 [Gossypium raimondii]
gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X1 [Gossypium
raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|763776132|gb|KJB43255.1|
hypothetical protein B456_007G190500 [Gossypium
raimondii] gi|763776133|gb|KJB43256.1| hypothetical
protein B456_007G190500 [Gossypium raimondii]
gi|763776135|gb|KJB43258.1| hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 2812 bits (7289), Expect = 0.0
Identities = 1387/1537 (90%), Positives = 1476/1537 (96%), Gaps = 2/1537 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MDLRFP+SPAEVAKVRVVQFGILSPDEIRQMSVV IEHSETTERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA++I+NPKNRL+KILDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPK++I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
DGMKM+AEYK Q+KKNDDPEQ+PEPVERKQ L+AE+VLS+LKRI+DEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
LLR SAWH E+E G ITPGDTQVRIEKGE+LSGTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AK++VK+LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNP-NYMLPEAVEDLKTIREIRSVFDAEVQKLEADRF 3107
L+SLK+K+++F+ +++Y+ID+ NWNP +YMLPE +EDL+TI+E+R VFDAEV KLEADR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 3108 QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 3287
QLGTEIA TGD++WPLPVN+KRL+ NAQKTFKVDFRR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 3288 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAA 3467
G D LS+EAQKNATLFF ILLRS LASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVA
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 3468 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3647
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3648 KPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEE 3827
P+ SKTKE+AKNVQCALEYTTLRSVT ATEVWYDPDPMST+IEED++FVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 3828 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 4007
+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 4008 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFK 4187
MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+SK +KFDE DG+K
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 4188 AENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 4367
EW+LDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4368 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 4547
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 4548 CLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTG 4727
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYME GL+FGMTPARSP++G
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSG 1499
Query: 4728 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
TPYH+GMMSP+YLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 TPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
gi|462398589|gb|EMJ04257.1| hypothetical protein
PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 2809 bits (7282), Expect = 0.0
Identities = 1388/1536 (90%), Positives = 1464/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVV IEHSET GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKIL DE+D K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQA+RI++PKNRL+KILDACKNK+KC+GGDEIDVQGQ+SE P+KKSRGGCGAQQPK+SI
Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
+GMKM AEYK Q+KK+DD EQ+PEPVERKQ L+AE+VLS+LKRI+DED QLLGLNPKYAR
Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
L R SAWH E E G ITPGDT VRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVK+LI AQ KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+K+++F+ + YE+D+ NWNP+YML E VEDLKTIRE R+VFDAEVQKLE DR Q
Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIA TGDNSWPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDD LS+EAQKNATLFF+ILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+ +KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FV SYYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD N+GFKA
Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ GLDFGMTP+RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYH+GMMSPNYLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x
bretschneideri]
Length = 1820
Score = 2809 bits (7281), Expect = 0.0
Identities = 1384/1536 (90%), Positives = 1464/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 234 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 413
MD+RFP+SPAEVAKV+ VQFGILSPDEIRQMSVV IEHSET GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 414 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 593
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMK VLS++R VCFNCSKIL DE+D K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK 120
Query: 594 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 770
FKQAMRI+NPK+RL+KILDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPK+SI
Sbjct: 121 FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 771 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 950
+GMKM AEYK Q+KKNDDPEQ+PEPVERKQ L+AE+VLS+LKRI+DED Q+LGLNPKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 951 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1130
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHN+NL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 1131 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1310
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1311 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1490
TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1491 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1670
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1671 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1850
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1851 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2030
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2031 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2210
L R SAWH E+E G ITPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2211 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2390
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVK+LI AQ KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 2391 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2570
EAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 2571 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2750
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2751 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2930
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2931 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3110
L+SLK+K+T+F+ + YE+D+ NWNP+YML E VEDLKTIRE R+VFDAEVQKLE DR Q
Sbjct: 901 LDSLKMKKTEFDRTFTYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 3111 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3290
LGTEIA TGDNSWPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3291 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3470
GDD LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDQLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3471 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3650
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3651 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3830
P+ +KTKERAKNVQCALEYTTLRSVTQATEVWYDPDP ST+IEED++FVK+YYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEV 1200
Query: 3831 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4010
+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4011 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4190
N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD+N+GFKA
Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1320
Query: 4191 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4370
E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 4371 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4550
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440
Query: 4551 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4730
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ GLDFGMTP+RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGT 1499
Query: 4731 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4838
PYH+GMMSPNYLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535