BLASTX nr result
ID: Rehmannia27_contig00007294
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00007294
(2006 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015084238.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 45 7e-14
ref|XP_007010213.1| Uncharacterized protein TCM_043642 [Theobrom... 45 2e-13
ref|XP_007027952.1| DNA/RNA polymerases superfamily protein [The... 45 2e-13
ref|XP_007010454.1| Uncharacterized protein TCM_044274 [Theobrom... 42 1e-12
ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [The... 43 2e-12
ref|XP_007032400.1| DNA/RNA polymerases superfamily protein [The... 42 2e-12
ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [The... 42 2e-12
ref|XP_007028165.1| Retrotransposon protein, Ty3-gypsy subclass,... 42 2e-12
ref|XP_007037177.1| DNA/RNA polymerases superfamily protein [The... 42 2e-12
ref|XP_009801365.1| PREDICTED: uncharacterized protein LOC104247... 40 5e-12
ref|XP_009780488.1| PREDICTED: uncharacterized protein LOC104229... 40 5e-12
ref|XP_007099710.1| Retrotransposon protein, Ty3-gypsy subclass,... 41 1e-11
ref|XP_007028157.1| DNA/RNA polymerases superfamily protein [The... 41 2e-11
ref|XP_007023829.1| DNA/RNA polymerases superfamily protein [The... 42 2e-11
ref|XP_009603456.1| PREDICTED: uncharacterized protein LOC104098... 40 3e-11
ref|XP_007032152.1| Retrotransposon protein, putative [Theobroma... 41 5e-11
gb|KYP48051.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Ca... 41 5e-11
gb|KYP31116.1| Retrotransposable element Tf2 [Cajanus cajan] 41 6e-11
gb|KYP34974.1| Retrotransposable element Tf2 [Cajanus cajan] 41 6e-11
gb|KYP59990.1| Retrotransposable element Tf2 [Cajanus cajan] 41 6e-11
>ref|XP_015084238.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107027646
[Solanum pennellii]
Length = 2339
Score = 44.7 bits (104), Expect(3) = 7e-14
Identities = 25/87 (28%), Positives = 41/87 (47%)
Frame = -2
Query: 1378 LQQWLNGFVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNIL 1199
LQ+ F + +GVL YEG L +P L+ ++G H Y+ H ++Y ++R +
Sbjct: 1156 LQKEKTPFKVTPDGVLRYEGRLCVPDTAGLRRQVMGEAHSARYSIHPGSTKMYHDLRCLY 1215
Query: 1198 LVEEYDNKYWNFWDTCLTGQPVKVKHQ 1118
+ F C Q VK++HQ
Sbjct: 1216 WWDGMKRDIAEFVAQCPNCQQVKIEHQ 1242
Score = 41.2 bits (95), Expect(3) = 7e-14
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = -1
Query: 1004 IIFDRLTKSTHFLQM--TYGLDQFS*LYIREIVRISDRDTS 888
+I DRLTKS HFL + TY + ++ LY+REIVR+ TS
Sbjct: 1281 VIVDRLTKSAHFLPVRTTYSAEDYARLYVREIVRLHGVPTS 1321
Score = 40.8 bits (94), Expect(3) = 7e-14
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + N S H TDG ERTI++ E CI DF+ + +LPL+EF YN
Sbjct: 1342 LGTQVNLSTAFHPQTDGQAERTIQTLEDMLRACIIDFKGSWDDHLPLIEFAYN 1394
>ref|XP_007010213.1| Uncharacterized protein TCM_043642 [Theobroma cacao]
gi|508727126|gb|EOY19023.1| Uncharacterized protein
TCM_043642 [Theobroma cacao]
Length = 295
Score = 45.1 bits (105), Expect(3) = 2e-13
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H I++Y +++ + E F
Sbjct: 7 DGVLRYGTKLYVPDGDGLRKEILEEAHMAAYMVHPGAIKMYQDLKEVYWWEGLKKNVAEF 66
Query: 1162 WDTCLTGQPVKVKHQ*QSR 1106
CL Q VK KHQ +R
Sbjct: 67 ISKCLVCQQVKAKHQKPAR 85
Score = 40.4 bits (93), Expect(3) = 2e-13
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +GI+ +FS H TDG +E TI++ E C+ D K + YLPLVEF YN
Sbjct: 176 KLQEALGIKLDFSTAFHPQTDGQSEWTIQTLEDMLRACVIDLGVKWDRYLPLVEFAYN 233
Score = 40.0 bits (92), Expect(3) = 2e-13
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Frame = -1
Query: 1022 SRNFPSI--IFDRLTKSTHF--LQMTYGLDQFS*LYIREIVRI 906
SR + SI I DRLTKSTHF ++ TYG Q++ +Y+ EI+R+
Sbjct: 112 SRGYDSIWIIVDRLTKSTHFFLVKTTYGAAQYARIYVDEIMRL 154
>ref|XP_007027952.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716557|gb|EOY08454.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1400
Score = 45.4 bits (106), Expect(3) = 2e-13
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H ++Y H ++Y +++ + EE F
Sbjct: 1009 DGVLRYGTRLYVPDGDGLRREILEEAHMVAYVVHPGATKMYQDLKEVYWWEELKRDVAEF 1068
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 1069 VSKCLVCQQVKAEHQ 1083
Score = 41.6 bits (96), Expect(3) = 2e-13
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D + E YLPLVEF YN
Sbjct: 1178 KLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 1235
Score = 38.1 bits (87), Expect(3) = 2e-13
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVR 909
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR
Sbjct: 1122 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVR 1155
>ref|XP_007010454.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
gi|508727367|gb|EOY19264.1| Uncharacterized protein
TCM_044274 [Theobroma cacao]
Length = 860
Score = 42.4 bits (98), Expect(3) = 1e-12
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D K E YLPLVEF YN
Sbjct: 618 KLQEALGTKLDFSTAFHPQTDGQSERTIKTLEDMLRACVIDLGVKWEQYLPLVEFAYN 675
Score = 41.2 bits (95), Expect(3) = 1e-12
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 449 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 508
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 509 VSKCLVCQQVKAEHQ 523
Score = 38.9 bits (89), Expect(3) = 1e-12
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 562 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRL 596
>ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716781|gb|EOY08678.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 666
Score = 42.7 bits (99), Expect(3) = 2e-12
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D K E YLPLVEF YN
Sbjct: 501 KLQEALGTKLDFSTTFHPQTDGQSERTIQTLEDMLRACVIDLGVKWEQYLPLVEFAYN 558
Score = 40.0 bits (92), Expect(3) = 2e-12
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ IL H +Y H ++Y +++ + E F
Sbjct: 332 DGVLRYGTRLYVPDGDGLRRKILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 391
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 392 VSKCLVCQQVKAEHQ 406
Score = 39.3 bits (90), Expect(3) = 2e-12
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFLQM--TYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 445 IVVDRLTKSAHFLSVKTTYGAAQYARVYVDEIVRL 479
>ref|XP_007032400.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508711429|gb|EOY03326.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1447
Score = 41.6 bits (96), Expect(3) = 2e-12
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*ET----CISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D + E YLPLVEF YN
Sbjct: 1175 KLQEALGTKLDFSTAFHPQTDGQSERTIQTLEAMLRACVIDLGVRWEQYLPLVEFAYN 1232
Score = 41.2 bits (95), Expect(3) = 2e-12
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 1006 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 1065
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 1066 VSKCLVCQQVKAEHQ 1080
Score = 38.9 bits (89), Expect(3) = 2e-12
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 1119 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRL 1153
>ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508774222|gb|EOY21478.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 878
Score = 41.6 bits (96), Expect(3) = 2e-12
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D + E YLPLVEF YN
Sbjct: 784 KLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 841
Score = 41.2 bits (95), Expect(3) = 2e-12
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 615 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 674
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 675 VSKCLVCQQVKAEHQ 689
Score = 38.9 bits (89), Expect(3) = 2e-12
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 728 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRL 762
>ref|XP_007028165.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao] gi|508716770|gb|EOY08667.1| Retrotransposon
protein, Ty3-gypsy subclass, putative [Theobroma cacao]
Length = 521
Score = 41.6 bits (96), Expect(3) = 2e-12
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D + E YLPLVEF YN
Sbjct: 249 KLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 306
Score = 41.2 bits (95), Expect(3) = 2e-12
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 80 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 139
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 140 VSKCLVCQQVKAEHQ 154
Score = 38.9 bits (89), Expect(3) = 2e-12
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 193 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRL 227
>ref|XP_007037177.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508774422|gb|EOY21678.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 448
Score = 41.6 bits (96), Expect(3) = 2e-12
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D + E YLPLVEF YN
Sbjct: 176 KLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 233
Score = 41.2 bits (95), Expect(3) = 2e-12
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 7 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 66
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 67 VSKCLVCQQVKAEHQ 81
Score = 38.9 bits (89), Expect(3) = 2e-12
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 120 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRL 154
>ref|XP_009801365.1| PREDICTED: uncharacterized protein LOC104247112, partial [Nicotiana
sylvestris]
Length = 893
Score = 40.4 bits (93), Expect(4) = 5e-12
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + N S H TDG ERTI++ E C+ DF+ + +LPL+EF YN
Sbjct: 665 LGTQVNLSTAFHPQTDGQAERTIQTLEDMLRACVLDFKGNWDDHLPLIEFAYN 717
Score = 37.0 bits (84), Expect(4) = 5e-12
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
+I DRLTK HFL + TY + ++ LYI+EIVR+
Sbjct: 604 VIIDRLTKCAHFLPVKTTYTAEDYAKLYIKEIVRL 638
Score = 32.0 bits (71), Expect(4) = 5e-12
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = -2
Query: 1357 FVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDN 1178
F I +G L Y+ L +P L+ I+ H Y+ H ++Y +++ +
Sbjct: 486 FGIGKDGALRYQSRLCVPNVAGLREKIMNEIHQSRYSIHPGSTKMYHDVKEQYWWDNMKK 545
Query: 1177 KYWNFWDTCLTGQPVKVKHQ 1118
F C Q VK++HQ
Sbjct: 546 SIAEFVAQCPNCQQVKIEHQ 565
Score = 30.0 bits (66), Expect(4) = 5e-12
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 1529 KFRWSEKCTENF*EVK*GLTSLPI 1458
KF+WS+ C +F E+K LTS P+
Sbjct: 436 KFQWSDTCERSFQELKNRLTSAPV 459
>ref|XP_009780488.1| PREDICTED: uncharacterized protein LOC104229533, partial [Nicotiana
sylvestris] gi|698489954|ref|XP_009791497.1| PREDICTED:
uncharacterized protein LOC104238734, partial [Nicotiana
sylvestris]
Length = 891
Score = 40.4 bits (93), Expect(4) = 5e-12
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + N S H TDG ERTI++ E C+ DF+ + +LPL+EF YN
Sbjct: 665 LGTQVNLSTAFHPQTDGQAERTIQTLEDMLRACVLDFKGNWDDHLPLIEFAYN 717
Score = 37.0 bits (84), Expect(4) = 5e-12
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
+I DRLTK HFL + TY + ++ LYI+EIVR+
Sbjct: 604 VIIDRLTKCAHFLPVKTTYTAEDYAKLYIKEIVRL 638
Score = 32.0 bits (71), Expect(4) = 5e-12
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = -2
Query: 1357 FVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDN 1178
F I +G L Y+ L +P L+ I+ H Y+ H ++Y +++ +
Sbjct: 486 FGIGKDGALRYQSRLCVPNVAGLREKIMNEIHQSRYSIHPGSTKMYHDVKEQYWWDNMKK 545
Query: 1177 KYWNFWDTCLTGQPVKVKHQ 1118
F C Q VK++HQ
Sbjct: 546 SIAEFVAQCPNCQQVKIEHQ 565
Score = 30.0 bits (66), Expect(4) = 5e-12
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 1529 KFRWSEKCTENF*EVK*GLTSLPI 1458
KF+WS+ C +F E+K LTS P+
Sbjct: 436 KFQWSDTCERSFQELKNRLTSAPV 459
>ref|XP_007099710.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao] gi|508728428|gb|EOY20325.1| Retrotransposon
protein, Ty3-gypsy subclass, putative [Theobroma cacao]
Length = 460
Score = 41.2 bits (95), Expect(3) = 1e-11
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 201 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 260
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 261 VSKCLVCQQVKAEHQ 275
Score = 39.3 bits (90), Expect(3) = 1e-11
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +F H TDG +ERTI++ E C+ D + E YLPLVEF YN
Sbjct: 370 KLQEALGTKLDFITAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 427
Score = 38.9 bits (89), Expect(3) = 1e-11
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 314 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRL 348
>ref|XP_007028157.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716762|gb|EOY08659.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 937
Score = 41.2 bits (95), Expect(3) = 2e-11
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 468 DGVLRYGTRLYVPDSDGLRREILEEAHMAAYVIHPGATKMYQDLKEVYWWEGLKRDVAEF 527
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 528 VSKCLVCQQVKAEHQ 542
Score = 38.9 bits (89), Expect(3) = 2e-11
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ DRLTKS HFL + TYG Q++ +Y+ EIVR+
Sbjct: 581 IVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRL 615
Score = 38.5 bits (88), Expect(3) = 2e-11
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +E TI++ E C+ D + E YLPLVEF YN
Sbjct: 637 KLQEALGTKLDFSTAFHPQTDGQSEWTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 694
>ref|XP_007023829.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508779195|gb|EOY26451.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 679
Score = 41.6 bits (96), Expect(3) = 2e-11
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 868 KLAL*MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
KL +G + +FS H TDG +ERTI++ E C+ D + E YLPLVEF YN
Sbjct: 407 KLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 464
Score = 41.2 bits (95), Expect(3) = 2e-11
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 238 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 297
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 298 VSKCLVCQQVKAEHQ 312
Score = 35.4 bits (80), Expect(3) = 2e-11
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
I+ D+LTKS HFL + TYG ++ +Y+ EIVR+
Sbjct: 351 IVVDQLTKSAHFLPVKTTYGAAHYARVYVDEIVRL 385
>ref|XP_009603456.1| PREDICTED: uncharacterized protein LOC104098435, partial [Nicotiana
tomentosiformis]
Length = 1983
Score = 40.4 bits (93), Expect(3) = 3e-11
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + N S H TDG ERTI++ E C+ DF+ + +LPL+EF YN
Sbjct: 847 LGTQVNLSTAFHPQTDGQAERTIQTLEDMLRVCVLDFKRSWDEHLPLIEFAYN 899
Score = 39.7 bits (91), Expect(3) = 3e-11
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = -1
Query: 1022 SRNFPSI--IFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 906
+R F SI I DRLTKS HFL + TY + ++ LYI+EIVR+
Sbjct: 778 NRKFDSIWVIVDRLTKSAHFLPVRSTYTAEDYAKLYIKEIVRL 820
Score = 37.7 bits (86), Expect(3) = 3e-11
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = -2
Query: 1399 LVDLNQLLQQWLNGFV-IVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRI 1223
LV+L + + Q + + +GVL Y+G L +P L+ I+ H Y+ H ++
Sbjct: 653 LVELRERVPQQKKPLLELKGDGVLRYKGRLCVPDVAGLRDRIMSEAHYSWYSIHPGSTKM 712
Query: 1222 YLEMRNILLVEEYDNKYWNFWDTCLTGQPVKVKHQ 1118
Y +++++ + F C + Q VKV+HQ
Sbjct: 713 YHDIKDMYWWNDMKKNIAEFVAQCTSCQQVKVEHQ 747
>ref|XP_007032152.1| Retrotransposon protein, putative [Theobroma cacao]
gi|508711181|gb|EOY03078.1| Retrotransposon protein,
putative [Theobroma cacao]
Length = 1263
Score = 41.2 bits (95), Expect(3) = 5e-11
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 1342 NGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDNKYWNF 1163
+GVL Y L +P + L+ +IL H +Y H ++Y +++ + E F
Sbjct: 847 DGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 906
Query: 1162 WDTCLTGQPVKVKHQ 1118
CL Q VK +HQ
Sbjct: 907 VSKCLVCQQVKAEHQ 921
Score = 39.7 bits (91), Expect(3) = 5e-11
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + +FS H TDG +E+TI++ E C+ D + E YLPLVEF YN
Sbjct: 996 LGTKLDFSTTFHPQTDGQSEQTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYN 1048
Score = 36.2 bits (82), Expect(3) = 5e-11
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVR 909
I+ DRLTKS HFL ++TYG Q++ +Y+ EI++
Sbjct: 960 IVVDRLTKSAHFLPVKITYGAAQYARVYVDEILQ 993
>gb|KYP48051.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanus cajan]
Length = 1049
Score = 41.2 bits (95), Expect(3) = 5e-11
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 10/47 (21%)
Frame = -1
Query: 1004 IIFDRLTKSTHFL--QMTYGLDQFS*LYIREIVR--------ISDRD 894
+I DRLTKS HFL + Y L++ + LYIREIVR ISDRD
Sbjct: 766 VIVDRLTKSAHFLPINIRYSLEKLTELYIREIVRLHGVPSSIISDRD 812
Score = 38.5 bits (88), Expect(3) = 5e-11
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = -2
Query: 1357 FVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYDN 1178
F + GVL + + +P D +K ILG H + H ++Y +++ + +
Sbjct: 648 FDLDQRGVLRFNNRICVPNDSEIKKIILGEAHKSKLSIHPGATKMYQDLKRMFWWPKMKK 707
Query: 1177 KYWNFWDTCLTGQPVKVKHQ 1118
+ + TCL Q K++HQ
Sbjct: 708 EIAQYVATCLICQKAKIEHQ 727
Score = 37.4 bits (85), Expect(3) = 5e-11
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + S H TDG +ERTI+S E C+ + + YLPL+EF YN
Sbjct: 827 LGTKLRLSSAYHPQTDGQSERTIQSLEDLLRACVLENSGSWDKYLPLIEFTYN 879
>gb|KYP31116.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 960
Score = 41.2 bits (95), Expect(3) = 6e-11
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -2
Query: 1360 GFVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYD 1181
GF +G+L Y+G + IP+DE LK IL H + H + ++Y +++ +
Sbjct: 516 GFEQDMDGILRYKGRICIPQDEELKKLILEEGHKSKLSVHPGMTKMYQDLKKMFWWNGMK 575
Query: 1180 NKYWNFWDTCLTGQPVKVKHQ 1118
+ + +C+ Q KV+HQ
Sbjct: 576 REIAEYVASCIVCQKAKVEHQ 596
Score = 37.7 bits (86), Expect(3) = 6e-11
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 10/47 (21%)
Frame = -1
Query: 1004 IIFDRLTKSTHFLQMT--YGLDQFS*LYIREIVR--------ISDRD 894
+I DRLTK HFL M + L++ + LYI+EIVR ISDRD
Sbjct: 635 VIVDRLTKCAHFLPMNIKWSLEKLTQLYIKEIVRLHGVPSSIISDRD 681
Score = 37.7 bits (86), Expect(3) = 6e-11
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + S H TDG +ERTI+S E CI D E LPLVEF YN
Sbjct: 696 LGTKLRLSSAYHPQTDGQSERTIQSLEDLLRACILDHLGNWEEMLPLVEFTYN 748
>gb|KYP34974.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 744
Score = 41.2 bits (95), Expect(3) = 6e-11
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -2
Query: 1360 GFVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYD 1181
GF +G+L Y+G + IP+DE LK IL H + H + ++Y +++ +
Sbjct: 300 GFEQDMDGILRYKGRICIPQDEELKKLILEEGHKSKLSVHPGMTKMYQDLKKMFWWNGMK 359
Query: 1180 NKYWNFWDTCLTGQPVKVKHQ 1118
+ + +C+ Q KV+HQ
Sbjct: 360 REIAEYVASCIVCQKAKVEHQ 380
Score = 37.7 bits (86), Expect(3) = 6e-11
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 10/47 (21%)
Frame = -1
Query: 1004 IIFDRLTKSTHFLQMT--YGLDQFS*LYIREIVR--------ISDRD 894
+I DRLTK HFL M + L++ + LYI+EIVR ISDRD
Sbjct: 419 VIVDRLTKCAHFLPMNIKWSLEKLTQLYIKEIVRLHGVPSSIISDRD 465
Score = 37.7 bits (86), Expect(3) = 6e-11
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + S H TDG +ERTI+S E CI D E LPLVEF YN
Sbjct: 480 LGTKLRLSSAYHPQTDGQSERTIQSLEDLLRACILDHLGNWEEMLPLVEFTYN 532
>gb|KYP59990.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 685
Score = 41.2 bits (95), Expect(3) = 6e-11
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -2
Query: 1360 GFVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMRNILLVEEYD 1181
GF +G+L Y+G + IP+DE LK IL H + H + ++Y +++ +
Sbjct: 241 GFEQDMDGILRYKGRICIPQDEELKKLILEEGHKSKLSVHPGMTKMYQDLKKMFWWNGMK 300
Query: 1180 NKYWNFWDTCLTGQPVKVKHQ 1118
+ + +C+ Q KV+HQ
Sbjct: 301 REIAEYVASCIVCQKAKVEHQ 321
Score = 37.7 bits (86), Expect(3) = 6e-11
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 10/47 (21%)
Frame = -1
Query: 1004 IIFDRLTKSTHFLQMT--YGLDQFS*LYIREIVR--------ISDRD 894
+I DRLTK HFL M + L++ + LYI+EIVR ISDRD
Sbjct: 360 VIVDRLTKCAHFLPMNIKWSLEKLTQLYIKEIVRLHGVPSSIISDRD 406
Score = 37.7 bits (86), Expect(3) = 6e-11
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = -2
Query: 853 MGIE*NFSGR*HL*TDG*TERTIES*E----TCISDFQSKLEAYLPLVEFDYN 707
+G + S H TDG +ERTI+S E CI D E LPLVEF YN
Sbjct: 421 LGTKLRLSSAYHPQTDGQSERTIQSLEDLLRACILDHLGNWEEMLPLVEFTYN 473