BLASTX nr result

ID: Rehmannia27_contig00007252 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00007252
         (448 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010677176.1| PREDICTED: uncharacterized protein LOC104892...    52   8e-07
gb|KVH87884.1| hypothetical protein Ccrd_024803 [Cynara carduncu...    41   8e-06

>ref|XP_010677176.1| PREDICTED: uncharacterized protein LOC104892855 [Beta vulgaris
           subsp. vulgaris]
          Length = 833

 Score = 52.4 bits (124), Expect(2) = 8e-07
 Identities = 33/82 (40%), Positives = 44/82 (53%)
 Frame = -1

Query: 439 RQVDVAEKLNKNHSMISKWIFENPCGDKCDVLFKFGDRILMREDFESMRPGSYISISVID 260
           R VDV +KL      I K++     GD+ +VL+ +      R  F S+    Y+   +ID
Sbjct: 497 RVVDVLKKLTIIEKQICKYVLTY--GDRNEVLYHYKGFQGERHLFSSLLE-EYVDTGIID 553

Query: 259 IWSILLNAKEQLRAAGSPLRFF 194
           IWS+LLN KE  R  GSP RFF
Sbjct: 554 IWSLLLNRKESGRGLGSPKRFF 575



 Score = 27.3 bits (59), Expect(2) = 8e-07
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 150 EFGDFSASRLQAIEMFFFPICKSEHIYVICFDLKKRACHILDNSSVGGV 4
           E+GD S      +++ F PI +     V+CF+ K     I+D   + G+
Sbjct: 614 EYGDMSD-----VDLVFCPILQRGCYVVLCFNFKHSKIDIIDQRMLTGI 657


>gb|KVH87884.1| hypothetical protein Ccrd_024803 [Cynara cardunculus var. scolymus]
          Length = 397

 Score = 41.2 bits (95), Expect(2) = 8e-06
 Identities = 23/53 (43%), Positives = 29/53 (54%)
 Frame = -1

Query: 316 REDFESMRPGSYISISVIDIWSILLNAKEQLRAAGSPLRFFATIYCTLKTVAS 158
           R  FESM   ++I   VIDIW  +LN  EQ R+  SP R F    C   T+A+
Sbjct: 158 RHIFESMVDDTFIFRGVIDIWETMLNKNEQYRSKSSPRRLF----CDTTTMAA 206



 Score = 35.0 bits (79), Expect(2) = 8e-06
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 141 DFSASRLQAIEMFFFPICKSEHIYVICFDLKKRACHILDNS 19
           D   + L+ ++M FFPI +  H Y+I F+ K     I+DN+
Sbjct: 210 DKELATLRNVDMIFFPIRRQSHFYLIVFNQKNPGLLIIDNT 250