BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00007170
         (3264 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   859   0.0  
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   859   0.0  
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   858   0.0  
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   855   0.0  
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   853   0.0  
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo...   834   0.0  
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...   840   0.0  
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   827   0.0  
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   820   0.0  
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   820   0.0  
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...   818   0.0  
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   806   0.0  
gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposo...   740   0.0  
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]   714   0.0  
gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposo...   697   0.0  
emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]   702   0.0  
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   678   0.0  
gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposo...   672   0.0  
gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposo...   672   0.0  
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo...   638   0.0  

>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  859 bits (2220), Expect = 0.0
 Identities = 460/981 (46%), Positives = 607/981 (61%), Gaps = 5/981 (0%)
 Frame = -3

Query: 3259 QVTGATLLQGTL-KNGLYKFELSQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            Q T   LLQG++  +GLYKF      A  P P       S  +            +   +
Sbjct: 111  QDTNEVLLQGSVGSDGLYKFP-----ALLPNPST----QSVQQQQLARIFSVNTAATSPV 161

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLE 2903
               TWH RLGH   D++  V +  N+    N  S  FCT C   KSH+ P   S+T +  
Sbjct: 162  SFATWHSRLGHPNVDVMKHVSRNYNIQLVSNNKS-NFCTPCCLGKSHRLPSNLSRTIYNT 220

Query: 2902 PFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQ 2723
            PFDLV++DLWGP+P  +T G  YYVTF+D +T++TWIY LK+K++    F  F  +V+ Q
Sbjct: 221  PFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQ 280

Query: 2722 FNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLA 2543
            ++  IK +Q+DWGGEYR+ + +L + GI HR+ CP+T  QNGVAERK+RH+VE+GL L+A
Sbjct: 281  YHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMA 340

Query: 2542 HSGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRP 2363
             + +   +W  +F +AVYLINR PS  +    PY  LFH  P Y SL++FGC CFPH+RP
Sbjct: 341  QAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRP 400

Query: 2362 YNANKLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEIQQT 2183
            YN +KLQFR+   +FLGY   +KGYK L   G++ +++ VVF ET FP+K   ++     
Sbjct: 401  YNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKASD 460

Query: 2182 QHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAV 2003
                        P  +  + ++ T  NP                P+TA+  +  T+ +  
Sbjct: 461  SQLPISVPLTINPTPTPTHATRLTSPNP---PTTSPSLISDSYSPNTAAHTSPSTLSIPT 517

Query: 2002 ELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQEALHS 1823
                LE SS   I P       N HPM TR K G +KPR+  TL+   +EP + ++AL +
Sbjct: 518  S-SNLEPSSSPIIHPH------NVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSN 570

Query: 1822 KEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKGY 1643
              W  AM+TEYNAL+ N TW+LVPLP  +  +GCKWV+++K++ +GS  + KARLVAKG+
Sbjct: 571  PTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGF 630

Query: 1642 TQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPHG 1463
             Q  GFDY ETFSPV+K VT+R++ +L +T  W I+QLDVNNAFLNG LE+++YM+QP G
Sbjct: 631  NQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPG 690

Query: 1462 FEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXXXX 1283
            FE  ++NLVCKL KAIYGLKQAPRAW+ KLK  L QL F  S+ D SLF      +    
Sbjct: 691  FEASDKNLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYI 750

Query: 1282 XXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSG-LHLCQQQYV 1106
                    ITGNN   +  L+  L   FSLKDLG +  FLGIEV     G L L Q +Y+
Sbjct: 751  LVYVDDIIITGNNSSILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYI 810

Query: 1105 KDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYSV 926
            +DLLNR +M  +K    PM+S   LSK   +   D +LYRSV+G LQY TITRP+I +SV
Sbjct: 811  RDLLNRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSV 870

Query: 925  NKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIF---TKSSSLQITGYSDSDWATDLDD 755
            NK+ QFM +PL  HW AVKR+LRYL  T ++GL     + SSSL I  Y D+DWA+D DD
Sbjct: 871  NKVCQFMSHPLTHHWAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDD 930

Query: 754  RKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTELHVPIV 575
            R+S +G  ++LG NLVSW SKKQ  V+RSSTEAEYRSLA   TEV WI+ LL+EL V   
Sbjct: 931  RRSTSGASIFLGPNLVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKV-TH 989

Query: 574  RTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALT 395
             TP+I+ DN+   ALA NPV H+R KH+ELD+ F+REKV    L V HVP+IDQ AD LT
Sbjct: 990  STPIIFCDNLSTVALAHNPVLHARTKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLT 1049

Query: 394  KPLSKQSFTRFRSRLNIVPTP 332
            K LS   F   RS+L +V +P
Sbjct: 1050 KALSPTRFCELRSKLQVVESP 1070


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  859 bits (2220), Expect = 0.0
 Identities = 460/981 (46%), Positives = 607/981 (61%), Gaps = 5/981 (0%)
 Frame = -3

Query: 3259 QVTGATLLQGTL-KNGLYKFELSQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            Q T   LLQG++  +GLYKF      A  P P       S  +            +   +
Sbjct: 446  QDTNEVLLQGSVGSDGLYKFP-----ALLPNPST----QSVQQQQLARIFSVNTAATSPV 496

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLE 2903
               TWH RLGH   D++  V +  N+    N  S  FCT C   KSH+ P   S+T +  
Sbjct: 497  SFATWHSRLGHPNVDVMKHVSRNYNIQLVSNNKS-NFCTPCCLGKSHRLPSNLSRTIYNT 555

Query: 2902 PFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQ 2723
            PFDLV++DLWGP+P  +T G  YYVTF+D +T++TWIY LK+K++    F  F  +V+ Q
Sbjct: 556  PFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQ 615

Query: 2722 FNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLA 2543
            ++  IK +Q+DWGGEYR+ + +L + GI HR+ CP+T  QNGVAERK+RH+VE+GL L+A
Sbjct: 616  YHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMA 675

Query: 2542 HSGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRP 2363
             + +   +W  +F +AVYLINR PS  +    PY  LFH  P Y SL++FGC CFPH+RP
Sbjct: 676  QAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRP 735

Query: 2362 YNANKLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEIQQT 2183
            YN +KLQFR+   +FLGY   +KGYK L   G++ +++ VVF ET FP+K   ++     
Sbjct: 736  YNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKASD 795

Query: 2182 QHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAV 2003
                        P  +  + ++ T  NP                P+TA+  +  T+ +  
Sbjct: 796  SQLPISVPLTINPTPTPTHATRLTSPNP---PTTSPSLISDSYSPNTAAHTSPSTLSIPT 852

Query: 2002 ELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQEALHS 1823
                LE SS   I P       N HPM TR K G +KPR+  TL+   +EP + ++AL +
Sbjct: 853  S-SNLEPSSSPIIHPH------NVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSN 905

Query: 1822 KEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKGY 1643
              W  AM+TEYNAL+ N TW+LVPLP  +  +GCKWV+++K++ +GS  + KARLVAKG+
Sbjct: 906  PTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGF 965

Query: 1642 TQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPHG 1463
             Q  GFDY ETFSPV+K VT+R++ +L +T  W I+QLDVNNAFLNG LE+++YM+QP G
Sbjct: 966  NQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPG 1025

Query: 1462 FEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXXXX 1283
            FE  ++NLVCKL KAIYGLKQAPRAW+ KLK  L QL F  S+ D SLF      +    
Sbjct: 1026 FEASDKNLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYI 1085

Query: 1282 XXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSG-LHLCQQQYV 1106
                    ITGNN   +  L+  L   FSLKDLG +  FLGIEV     G L L Q +Y+
Sbjct: 1086 LVYVDDIIITGNNSSILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYI 1145

Query: 1105 KDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYSV 926
            +DLLNR +M  +K    PM+S   LSK   +   D +LYRSV+G LQY TITRP+I +SV
Sbjct: 1146 RDLLNRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSV 1205

Query: 925  NKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIF---TKSSSLQITGYSDSDWATDLDD 755
            NK+ QFM +PL  HW AVKR+LRYL  T ++GL     + SSSL I  Y D+DWA+D DD
Sbjct: 1206 NKVCQFMSHPLTHHWAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDD 1265

Query: 754  RKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTELHVPIV 575
            R+S +G  ++LG NLVSW SKKQ  V+RSSTEAEYRSLA   TEV WI+ LL+EL V   
Sbjct: 1266 RRSTSGASIFLGPNLVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKV-TH 1324

Query: 574  RTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALT 395
             TP+I+ DN+   ALA NPV H+R KH+ELD+ F+REKV    L V HVP+IDQ AD LT
Sbjct: 1325 STPIIFCDNLSTVALAHNPVLHARTKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLT 1384

Query: 394  KPLSKQSFTRFRSRLNIVPTP 332
            K LS   F   RS+L +V +P
Sbjct: 1385 KALSPTRFCELRSKLQVVESP 1405


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  858 bits (2218), Expect = 0.0
 Identities = 442/997 (44%), Positives = 628/997 (62%), Gaps = 24/997 (2%)
 Frame = -3

Query: 3262 DQVTGATLLQGTLKNGLYKFELSQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            DQVT A L+ G +++GLY F+ S +     Q    SK+ S               S    
Sbjct: 465  DQVTQAVLMVGKVRDGLYAFDSSHLALRPTQS--LSKSPSVVASSFSSKVCTTSLSST-- 520

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLE 2903
              D WH RLGH +   +  VL +CN+ + +NK+   FC++C   K H+ PF+ S T + +
Sbjct: 521  -FDLWHKRLGHPSAATIKNVLSKCNVAH-INKMDSNFCSSCCLGKIHRFPFSLSHTTYTK 578

Query: 2902 PFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQ 2723
            P +L+H DLWGP+   + +G  YY+ F+D  ++++WI+ L+ KSEAI+ F++FKT VE Q
Sbjct: 579  PLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQ 638

Query: 2722 FNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLA 2543
            F+ KIK++Q+DWGGE+R   ++L ++GIVHRVSCP+T QQNGVAERK+R +VE GL LL 
Sbjct: 639  FDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLH 698

Query: 2542 HSGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRP 2363
             + +   +W E+F++ VYL NR P+  L  K P EVLF   P Y+ LKVFGC CFP++RP
Sbjct: 699  TASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRP 758

Query: 2362 YNANKLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFK---------- 2213
            YN +KLQ+R+    FLGY   +KGYK +  +G++ ++  V+F ET+FP+           
Sbjct: 759  YNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLL 818

Query: 2212 ---TQTTAEIQQTQHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHT 2042
               + +T+ +  +              TS + +++   +                   H 
Sbjct: 819  STVSPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISE------------MDNIVSTHP 866

Query: 2041 ASKDTYDTI---------PLAVELPALEES-SQTNIMPQIDSVVPNTHPMQTRGKTGHLK 1892
             + ++ DT          P+A  +  +  S +  ++   I     NTHPM TR K+G +K
Sbjct: 867  HAPNSADTTLTPAQVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVK 926

Query: 1891 PRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWV 1712
            P++F   ++   EP S+  AL   EWK AM  EY+AL +N TW+LVPLPA ++ +GCKWV
Sbjct: 927  PKIFIAAIR---EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWV 983

Query: 1711 YKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQ 1532
            YK K++ DG+  + KARLVAKG+ Q  GFD+ ETFSPVVK  T+RVVF++ ++  W IKQ
Sbjct: 984  YKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQ 1043

Query: 1531 LDVNNAFLNGELEQDIYMEQPHGF-EKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQ 1355
            LDVNNAFLNG+L+++++M+QP GF ++ N NLVC+L KA+YGLKQAPRAW+ KL + L  
Sbjct: 1044 LDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLS 1103

Query: 1354 LGF*FSQADNSLFFRKTNTSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMV 1175
             GF  +++D SLF R T               + G++   I++LI  L+  FSLKDLG V
Sbjct: 1104 FGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEV 1163

Query: 1174 HHFLGIEVTHAKSGLHLCQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGT 995
            H+FLGI+V+H  +GLHL Q +Y++DLL +  M   K +  P+ +   L    GD V D  
Sbjct: 1164 HYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLH 1223

Query: 994  LYRSVIGGLQYITITRPDIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTK 815
             YRS +G LQY+TITRP++ +SVNK+ QFMQNP + HWK VKR+LRYL  T  +GL   K
Sbjct: 1224 GYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKK 1283

Query: 814  SSSLQITGYSDSDWATDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAH 635
            SS+L + G+ D+DWA+DLDDR+S +G CV+LG NL+SW SKKQ  VSRSS E EYRSLA 
Sbjct: 1284 SSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAG 1343

Query: 634  CATEVIWIRNLLTELHVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVN 455
               E+ W+R+LL+EL +P+ + P++W DN+    L++NPV H+R KH+ELD++F+REKV 
Sbjct: 1344 LVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVI 1403

Query: 454  DGILTVQHVPSIDQTADALTKPLSKQSFTRFRSRLNI 344
               + V+HVPS DQ AD LTK +S   F  FR +L I
Sbjct: 1404 RKEVEVRHVPSADQLADVLTKTVSSTQFIEFRHKLRI 1440


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  855 bits (2208), Expect = 0.0
 Identities = 450/996 (45%), Positives = 623/996 (62%), Gaps = 30/996 (3%)
 Frame = -3

Query: 3241 LLQGTL-KNGLYKFEL------SQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            LL+GT+  +GLY+F+       S   +NS    + S +  +  +            +   
Sbjct: 435  LLEGTVGADGLYQFKPFKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNNTVSVMQNGN 494

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLE 2903
                WH RLGHA    V  +L  CN+ +S NK +   CT C   KSH+     S T + +
Sbjct: 495  VFQMWHLRLGHAHTSAVKNILNLCNIPFS-NKTATLPCTFCCMGKSHRLHSPLSNTVYTK 553

Query: 2902 PFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQ 2723
            PF+++H DLWGP+P  +  G  YY+TF+D  TK+TWIYFLKAKS+A++AF  FK L++ Q
Sbjct: 554  PFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQ 613

Query: 2722 FNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLA 2543
            F   IK IQSDWGGE+R  +A L + GI HR++CP+T  QNG  ERK+RH+VE+GL LL+
Sbjct: 614  FQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTVERKHRHIVEMGLTLLS 673

Query: 2542 HSGVSQNYWLEAFQSAVYLINRTPSKKLG-FKSPYEVLFHHKPSYTSLKVFGCLCFPHIR 2366
            H+ +   +W  +F  AVYLINR PS  +  F+SPY  L   +P Y+ +KVFGCLCFPH+R
Sbjct: 674  HAALPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLR 733

Query: 2365 PYNANKLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEIQQ 2186
            PYN +KLQ+R+ P ++LG    +KG+K L  +G+I +++ V+F E+ FP+ +   A    
Sbjct: 734  PYNNHKLQYRSSPCVYLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPYLS-LFASSSS 792

Query: 2185 TQHXXXXXXXXXXPLTSSLYNSKNTDDN--------PCXXXXXXXXXXXXXXXPHTASKD 2030
              H               L+ S NT+ N        P                P +++  
Sbjct: 793  NSHMSHTYP------AQILFPSVNTNTNLHPETSSAPDTDPPDPVSPLPGSVSPSSSTPL 846

Query: 2029 TYDTIPLAVELPALEESSQTNIMPQ--IDSVVP--------NTHPMQTRGKTGHLKPRVF 1880
            T   I   +  P    S      P   + ++ P        N HPM TR KTG+LKP+VF
Sbjct: 847  TISQINSLISQPISTTSPSVPTPPADPVPAIRPASQNISHHNAHPMITRAKTGNLKPKVF 906

Query: 1879 STLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIK 1700
               +    EP S++ AL+   W  AM+ EY ALM N+TWTLVPLP  ++ +GCKW++++K
Sbjct: 907  VAAL----EPKSVKSALNDPAWLQAMQAEYKALMDNQTWTLVPLPQHRKAIGCKWIFRVK 962

Query: 1699 KHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVN 1520
            ++ DG+  + KARLVAKG+ QT GFD+ ETFSPV+K +TIR++ +L VT  W ++Q+DVN
Sbjct: 963  ENPDGTVNKFKARLVAKGFLQTAGFDFTETFSPVIKPITIRIILTLAVTFKWSVQQIDVN 1022

Query: 1519 NAFLNGELEQDIYMEQPHGFEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*F 1340
            NAFLNG L++++YM QP GFE  +++LVCKL K++YGLKQAPRAWY +L Q L QLGF  
Sbjct: 1023 NAFLNGILQEEVYMTQPAGFEASDKSLVCKLHKSLYGLKQAPRAWYDRLTQALLQLGFVK 1082

Query: 1339 SQADNSLFFRKTNTSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLG 1160
            S+ D SL     N +            ITG+    IS+LIH L++ F+LK LG + +FLG
Sbjct: 1083 SKCDPSLLIHTQNGACTYVLIYVDDILITGSAPHLISDLIHKLNMKFALKQLGQIDYFLG 1142

Query: 1159 IEVTHAKSG-LHLCQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRS 983
            IEV H  SG L L Q +Y++DLL + +M  +     PMVSS  LSK   D++ D TLYRS
Sbjct: 1143 IEVHHLPSGALLLNQTKYIRDLLCKAHMEDSAPIGSPMVSSCRLSKYGSDTMTDPTLYRS 1202

Query: 982  VIGGLQYITITRPDIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSS- 806
            ++G LQY T+TRPDI +SVNK+ QFM +PL+SHWKAVKR+LRYL  T ++GL+ T S + 
Sbjct: 1203 IVGALQYATLTRPDIAFSVNKVCQFMAHPLESHWKAVKRILRYLNGTLSHGLLLTPSPTS 1262

Query: 805  --LQITGYSDSDWATDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHC 632
                +  YSD+DWATD DDR+S +G C+Y G NL+SW SKKQ  V+RSSTEAEYRS+A+ 
Sbjct: 1263 PPFSLRAYSDADWATDQDDRRSTSGSCIYFGPNLISWGSKKQQLVARSSTEAEYRSMANT 1322

Query: 631  ATEVIWIRNLLTELHVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVND 452
              +++WI++LL EL VP + TP +  DN+ A +L+ NP+ HS+ KH+ELD+HF+REKV  
Sbjct: 1323 TADLLWIQSLLRELQVPFL-TPTLLCDNLSAVSLSHNPILHSKTKHIELDIHFVREKVLS 1381

Query: 451  GILTVQHVPSIDQTADALTKPLSKQSFTRFRSRLNI 344
              L + HVP+ DQ AD LTKPLS    T  R++L +
Sbjct: 1382 KQLNILHVPAQDQLADPLTKPLSPSQHTAIRTKLKV 1417


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  853 bits (2204), Expect = 0.0
 Identities = 449/996 (45%), Positives = 623/996 (62%), Gaps = 30/996 (3%)
 Frame = -3

Query: 3241 LLQGTL-KNGLYKFEL------SQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            LL+GT+  +GLY+F+       S   +NS    + S +  +  +            +   
Sbjct: 435  LLEGTVGADGLYQFKPFKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNNTVSVMQNGN 494

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLE 2903
                WH RLGHA    V  +L  CN+ +S NK +   CT C   KSH+     S T + +
Sbjct: 495  VFQMWHLRLGHAHTSAVKNILNLCNIPFS-NKTATLPCTFCCMGKSHRLHSPLSNTVYTK 553

Query: 2902 PFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQ 2723
            PF+++H DLWGP+P  +  G  YY+TF+D  TK+TWIYFLKAKS+A++AF  FK L++ Q
Sbjct: 554  PFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQ 613

Query: 2722 FNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLA 2543
            F   IK IQSDWGGE+R  +A L + GI HR++CP+T  QNG  ERK+RH+VE+GL LL+
Sbjct: 614  FQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTVERKHRHIVEMGLTLLS 673

Query: 2542 HSGVSQNYWLEAFQSAVYLINRTPSKKLG-FKSPYEVLFHHKPSYTSLKVFGCLCFPHIR 2366
            H+ +   +W  +F  AVYLINR PS  +  F+SPY  L   +P Y+ +KVFGCLCFPH+R
Sbjct: 674  HADLPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLR 733

Query: 2365 PYNANKLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEIQQ 2186
            PYN +KLQ+++ P ++LG    +KG+K L  +G+I +++ V+F E+ FP+ +   A    
Sbjct: 734  PYNNHKLQYKSSPCVYLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPYLS-LFASSSS 792

Query: 2185 TQHXXXXXXXXXXPLTSSLYNSKNTDDN--------PCXXXXXXXXXXXXXXXPHTASKD 2030
              H               L+ S NT+ N        P                P +++  
Sbjct: 793  NSHMSHTYP------AQILFPSVNTNTNLHPETSSAPDTDPPDPVSPLPGSVSPSSSTPL 846

Query: 2029 TYDTIPLAVELPALEESSQTNIMPQ--IDSVVP--------NTHPMQTRGKTGHLKPRVF 1880
            T   I   +  P    S      P   + ++ P        N HPM TR KTG+LKP+VF
Sbjct: 847  TISQINSLISQPISTTSPSVPTPPADPVPAIRPASQNISHHNAHPMITRAKTGNLKPKVF 906

Query: 1879 STLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIK 1700
               +    EP S++ AL+   W  AM+ EY ALM N+TWTLVPLP  ++ +GCKW++++K
Sbjct: 907  VAAL----EPKSVKSALNDPAWLQAMQAEYKALMDNQTWTLVPLPQHRKAIGCKWIFRVK 962

Query: 1699 KHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVN 1520
            ++ DG+  + KARLVAKG+ QT GFD+ ETFSPV+K +TIR++ +L VT  W ++Q+DVN
Sbjct: 963  ENPDGTVNKFKARLVAKGFLQTAGFDFTETFSPVIKPITIRIILTLAVTFKWSVQQIDVN 1022

Query: 1519 NAFLNGELEQDIYMEQPHGFEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*F 1340
            NAFLNG L++++YM QP GFE  +++LVCKL K++YGLKQAPRAWY +L Q L QLGF  
Sbjct: 1023 NAFLNGILQEEVYMTQPAGFEASDKSLVCKLHKSLYGLKQAPRAWYDRLTQALLQLGFVK 1082

Query: 1339 SQADNSLFFRKTNTSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLG 1160
            S+ D SL     N +            ITG+    IS+LIH L++ F+LK LG + +FLG
Sbjct: 1083 SKCDPSLLIHTQNGACTYVLIYVDDILITGSAPHLISDLIHKLNMKFALKQLGQIDYFLG 1142

Query: 1159 IEVTHAKSG-LHLCQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRS 983
            IEV H  SG L L Q +Y++DLL + +M  +     PMVSS  LSK   D++ D TLYRS
Sbjct: 1143 IEVHHLPSGALLLNQTKYIRDLLCKAHMEDSAPIGSPMVSSCRLSKYGSDTMTDPTLYRS 1202

Query: 982  VIGGLQYITITRPDIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSS- 806
            ++G LQY T+TRPDI +SVNK+ QFM +PL+SHWKAVKR+LRYL  T ++GL+ T S + 
Sbjct: 1203 IVGALQYATLTRPDIAFSVNKVCQFMAHPLESHWKAVKRILRYLNGTLSHGLLLTPSPTS 1262

Query: 805  --LQITGYSDSDWATDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHC 632
                +  YSD+DWATD DDR+S +G C+Y G NL+SW SKKQ  V+RSSTEAEYRS+A+ 
Sbjct: 1263 PPFSLRAYSDADWATDQDDRRSTSGSCIYFGPNLISWGSKKQQLVARSSTEAEYRSMANT 1322

Query: 631  ATEVIWIRNLLTELHVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVND 452
              +++WI++LL EL VP + TP +  DN+ A +L+ NP+ HS+ KH+ELD+HF+REKV  
Sbjct: 1323 TADLLWIQSLLRELQVPFL-TPTLLCDNLSAVSLSHNPILHSKTKHIELDIHFVREKVLS 1381

Query: 451  GILTVQHVPSIDQTADALTKPLSKQSFTRFRSRLNI 344
              L + HVP+ DQ AD LTKPLS    T  R++L +
Sbjct: 1382 KQLNILHVPAQDQLADPLTKPLSPSQHTAIRTKLKV 1417


>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1007

 Score =  834 bits (2154), Expect = 0.0
 Identities = 436/982 (44%), Positives = 606/982 (61%), Gaps = 10/982 (1%)
 Frame = -3

Query: 3259 QVTGATLLQGTLKNGLYKFELSQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRIG 3080
            Q T   +LQG L+ GLY               VF    +T  +           ++    
Sbjct: 49   QDTNQIILQGRLQQGLY---------------VFPNLKTTDSYSAYQAVTELNSAQSFSN 93

Query: 3079 LDTWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEP 2900
            L  WH RLGH ++ IV  VL +C +  S N  +   C +C   K H+ PF +S T + +P
Sbjct: 94   LQLWHARLGHPSSKIVKTVLDKCQI--SCNTNNNLNCHSCCLGKVHQLPFIQSTTVYSKP 151

Query: 2899 FDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQF 2720
             +LV TD+WGPSP  +T+GS YY+ F+D  +KY+WIY L+ KS+A+ AFL  K+L E Q 
Sbjct: 152  LELVFTDIWGPSPIASTDGSRYYIVFLDAFSKYSWIYLLQYKSQALYAFLQLKSLAEKQL 211

Query: 2719 NKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAH 2540
              K+K +QSD   E+   S +L ++GI+HR+SCP+T QQNG  ERK+RH+ E GL LLA 
Sbjct: 212  GTKLKALQSDNAKEFLTFSPYLKQNGIIHRLSCPHTHQQNGSPERKHRHITETGLTLLAQ 271

Query: 2539 SGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPY 2360
            + +  ++W EAF +A  LIN  P+  L   SPYE+LFH  P Y  LK+FGC C+P +RPY
Sbjct: 272  ASLPLSFWGEAFLTATSLINMLPTPNLDNASPYEMLFHKAPDYKFLKIFGCACYPLLRPY 331

Query: 2359 NANKLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEI---- 2192
            N +K  F++   +FLGY   +KGY  L PSGK  ++R+V F ET FP +TQ    I    
Sbjct: 332  NPHKFDFKSQQCLFLGYSPSHKGYICLSPSGKRYISRNVKFFETVFPCQTQPNPFIPTIR 391

Query: 2191 QQTQHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIP 2012
                            LTSS  N+ +++ NP                  T +    DT P
Sbjct: 392  SSNSVHNNSDLSHLTVLTSSSQNNHHSNSNPIVT---------------TTALSLNDTNP 436

Query: 2011 LAVELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLM-----QNIIEPC 1847
             AV    + E   ++  PQ      N H M TR K G  KP+ ++  +      + IEP 
Sbjct: 437  AAVATVPIIEPGVSSSGPQ------NAHLMTTRSKAGIFKPKTYAAALVKSSYDHTIEPN 490

Query: 1846 SLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCK 1667
            +++EAL   EW  AM+ EY AL+ N+TW+LV LP   + +GCKW++K K + DGSF R K
Sbjct: 491  TVKEALAKPEWLKAMKDEYQALVSNQTWSLVDLPIGYKPIGCKWIFKSKYNPDGSFQRHK 550

Query: 1666 ARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQD 1487
            ARLVAKGY Q PG D+ ETFSPVVK  T+R+V SL +T  W I Q+D+NN FL+G+L++ 
Sbjct: 551  ARLVAKGYNQKPGLDFSETFSPVVKPTTVRIVLSLAITNQWPIHQIDINNVFLHGDLQES 610

Query: 1486 IYMEQPHGFEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRK 1307
            +YM QP GF   +++ VCKL+KAIYGLKQAPR+WY KL   L Q+GF  +++D SLF R 
Sbjct: 611  VYMSQPPGFNTQHKDKVCKLNKAIYGLKQAPRSWYCKLSNTLIQMGFHSTKSDTSLFVRF 670

Query: 1306 TNTSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSG-L 1130
            + T+            ITGN+ +EI ++I  L   FSLKDLG +H+FLG+EVT  K G L
Sbjct: 671  SKTTTLMLLIYVDDIIITGNSKEEIRSVISFLHDKFSLKDLGSLHYFLGVEVTTTKEGNL 730

Query: 1129 HLCQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITIT 950
             L Q +Y++++L++ +MS +     PM+++  L++    SV D + YRS++G LQY+TIT
Sbjct: 731  LLTQTKYLREILHKASMSDSTPQPTPMLANLKLTENETTSVPDPSFYRSIVGALQYLTIT 790

Query: 949  RPDIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWA 770
            RPD+ ++VNK+ Q+M  P + HWKAVKR+LRYL  T ++GL+  K+  L + G+ DSDW 
Sbjct: 791  RPDVSFAVNKVCQYMHCPQEHHWKAVKRILRYLQGTIHHGLLIQKNKQLNLAGFCDSDWG 850

Query: 769  TDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL 590
             D DDRKS +G+CVYLG NL+SW S+KQ +VSRS+TEAEYRS+A  A ++IWI++LL+EL
Sbjct: 851  NDKDDRKSTSGYCVYLGSNLISWSSRKQKSVSRSTTEAEYRSIADVAADIIWIQSLLSEL 910

Query: 589  HVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQT 410
             VP    P I+ DN+ A  + +NPV HS+ KH ELD+HF+R+KV    + V H+P+  Q 
Sbjct: 911  RVP-KSLPRIYCDNLSAVLITANPVLHSKTKHFELDLHFVRDKVKQNEVKVIHLPAKYQV 969

Query: 409  ADALTKPLSKQSFTRFRSRLNI 344
            AD LTKPL+KQ F  FR++L +
Sbjct: 970  ADTLTKPLAKQHFHHFRNKLMV 991


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1403

 Score =  840 bits (2170), Expect = 0.0
 Identities = 457/982 (46%), Positives = 600/982 (61%), Gaps = 15/982 (1%)
 Frame = -3

Query: 3244 TLLQGTLKNGLYKFELSQV-KANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRIGLDTW 3068
            TLL+G LKNGLY F+  Q+ K +  +  V S  T+ T              + R   D W
Sbjct: 432  TLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRTT---------LYVQRTRKSYDVW 482

Query: 3067 HCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFDLV 2888
            H RL HA+  IV  V+K CN+   +N      C +C   KSH  PF++S T +  P +LV
Sbjct: 483  HNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPLELV 542

Query: 2887 HTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNKKI 2708
            ++D+WGPS   +  G  YYV F D  +KYTWIYF+  KSE    F+HFK++VE QF  KI
Sbjct: 543  YSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQFGHKI 602

Query: 2707 KTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSGVS 2528
            K  QSD G E+  ++    ++GI HR+SCP++ QQNG AERK+RH+ EVGL LL+ SG+ 
Sbjct: 603  KMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSSSGLP 662

Query: 2527 QNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNANK 2348
              +W +AF +A+++INR P+  LG KSPYEVLF+  P Y  L+ FGC C+PH+RP+N++K
Sbjct: 663  HIFWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKIPDYLLLRPFGCACYPHLRPFNSHK 722

Query: 2347 LQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFP----FKTQTTAEIQQTQ 2180
            + FR+   +F+GY   +KGYK    +GKII++R+VVF E TFP    F T   A +  + 
Sbjct: 723  MDFRSSQCVFIGYSMQHKGYKCFTTNGKIIISRNVVFDEDTFPGPSYFNTNNVAGLSSSH 782

Query: 2179 HXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVE 2000
                       P  S   NS  T   P                    S+D   T      
Sbjct: 783  SPQPVPSIHVLPSQSLAPNSATT--VPLVSSIDESLQDSQLTSTTDTSQDNLIT------ 834

Query: 1999 LPALEESSQTNIMPQIDSV---------VPNTHPMQTRGKTGHLKPRVFSTLMQNIIEPC 1847
                  SSQ N  P I +V           N HPM TR K G  KP+ F        EP 
Sbjct: 835  -----SSSQPNPQPIITTVPDPASPATRTTNQHPMITRAKIGVFKPKAFLATS----EPI 885

Query: 1846 SLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCK 1667
            S+ +AL +K WK AM+ EYNAL+KN TW LV LP  +  + CKW++K K   DGS  R K
Sbjct: 886  SVAQALDNKHWKQAMQDEYNALLKNHTWDLVSLPPGRTAITCKWIFKNKYKQDGSILRHK 945

Query: 1666 ARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQD 1487
            ARLVA+G++Q  G DY +TFSPVVK V+IR+V +L V+ GW I Q+DV+NAFLNG+L++D
Sbjct: 946  ARLVARGFSQQQGLDYTDTFSPVVKPVSIRIVLALAVSKGWPIHQIDVDNAFLNGDLKED 1005

Query: 1486 IYMEQPHGFEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRK 1307
            IYM QP GF  G  N VCKL KA+YGLKQAPRAW+ KL  +L QLGF  +++D+SLF   
Sbjct: 1006 IYMLQPQGFHNGAPNTVCKLRKALYGLKQAPRAWFQKLTLILLQLGFKQARSDSSLFTFT 1065

Query: 1306 TNTSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEV-THAKSGL 1130
            +  +            IT N+   I  LI  L   F LKDLG +H+FLGIEV +    G+
Sbjct: 1066 SKVTSIYILIYVDDIIITSNSPAAIQTLISTLHRFFPLKDLGSLHYFLGIEVNSDGAGGI 1125

Query: 1129 HLCQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITIT 950
            HL Q +Y+KD+L+++NMS+AK    PM  S  L+        D +LYRSVIG LQY+TIT
Sbjct: 1126 HLSQTKYLKDILDKLNMSNAKPVKTPMAPSLKLTNDGTAVCPDPSLYRSVIGALQYLTIT 1185

Query: 949  RPDIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWA 770
            RPDI Y+VNKL QFM +PL+SHWKAVKR+LRYL  T  +GL + KS+   I  Y DSDWA
Sbjct: 1186 RPDIAYTVNKLCQFMHHPLESHWKAVKRLLRYLQGTLQHGLHYKKSTDTGIHAYCDSDWA 1245

Query: 769  TDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL 590
            +D +D +S +G CVYLG N+VSW +KKQ  VSRSSTEAE+RSLA   TEV +I+NLL+EL
Sbjct: 1246 SDHEDMRSTSGNCVYLGPNIVSWMAKKQRVVSRSSTEAEFRSLASLVTEVQYIQNLLSEL 1305

Query: 589  HVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQT 410
            H    + P+IW DN GA  L++NPV H++ KH ELD+ F+RE+V  G + V+H+P+  Q 
Sbjct: 1306 HNSSTQPPLIWCDNQGAVLLSANPVLHTKTKHFELDLWFVRERVARGQIQVKHIPARFQV 1365

Query: 409  ADALTKPLSKQSFTRFRSRLNI 344
            AD LTK  S   F   R +L +
Sbjct: 1366 ADLLTKAPSSSIFLALRHKLTV 1387


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  827 bits (2137), Expect = 0.0
 Identities = 426/886 (48%), Positives = 572/886 (64%), Gaps = 36/886 (4%)
 Frame = -3

Query: 2866 SPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNKKIKTIQSDW 2687
            +P  ++ G  YYV+F D  ++YTW+Y LK KS+  +AFL FK   E QF  K+KT Q+DW
Sbjct: 386  APINSSYGFTYYVSFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDW 445

Query: 2686 GGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSGVSQNYWLEA 2507
            GGE+R++  +  ++GI+HR+SCP+T +QNG+ ERK+RH+VE+GL LLA + +   YW +A
Sbjct: 446  GGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDA 505

Query: 2506 FQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNANKLQFRAVP 2327
            F +AV+LINR P++ L  K PYE LF+ KP+Y+ LKVFGCLCFPH+RPYN +KL FR+ P
Sbjct: 506  FSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSP 565

Query: 2326 SIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEIQQTQHXXXXXXXXXX 2147
              FLGY   +KGYK L   G++ ++R VVF ET FPF  +    +Q   H          
Sbjct: 566  CTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQKPVQIVSHSTVGLPCIPL 625

Query: 2146 PL--------------TSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPL 2009
                            TSS  +S   D+N                    ++ D+  T+P+
Sbjct: 626  VKNLEPJSVSPSLSLPTSSAQSSHQLDEN--------LGSDIRSIQXDFSNTDSSSTVPI 677

Query: 2008 AVELPALEESSQTNIMP-----QIDSVVPNT-------------HPMQTRGKTGHLKPRV 1883
              E  ++  SS    +P       +S  PN              H M TR K G  KP V
Sbjct: 678  LXESASIXSSSNLYALPGTIPLSTNSDEPNESINTRPVTXPQQPHHMVTRSKNGIFKPXV 737

Query: 1882 FSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKI 1703
            + T+  N+ EP + QEA+   +WK AM+ E+ ALMKNKTW+LV LP ++  VGC+WV+K+
Sbjct: 738  Y-TVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWVFKL 796

Query: 1702 KKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDV 1523
            K++ DGS +R KARLVAKGY+Q PGFD+ ETFSPVVK  TIRVV ++ V+  W I+QLDV
Sbjct: 797  KRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIRQLDV 856

Query: 1522 NNAFLNGELEQDIYMEQPHGFE---KGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQL 1352
            NNAFLNGEL++++YM+QP GF+      Q LVCKL KA+YGLKQAPRAW+ KLK  LQQ 
Sbjct: 857  NNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFDKLKISLQQF 916

Query: 1351 GF*FSQADNSLFFRKTNTSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVH 1172
            GF  +++D SLF R TN S            +TG++ +EI  LI  L   FSLKDLG + 
Sbjct: 917  GFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLFSLKDLGELS 976

Query: 1171 HFLGIEVTH-AKSGLHLCQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGT 995
            +FLGIEV   A  GLHL Q++Y++DLL +  M  AK    PM+S   LS  +GD + +  
Sbjct: 977  YFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVF 1036

Query: 994  LYRSVIGGLQYITITRPDIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTK 815
             YRSV+G LQYITITRP+I +SVNK+ QFMQ PLD+HWKAVKR+LRYL  T + G++   
Sbjct: 1037 EYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGTTDLGIVLKP 1096

Query: 814  SSSLQITGYSDSDWATDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAH 635
            S ++ + G+ D+DW +D+DDR+S +G CV+LG +LVSW SKKQ T SRSSTEAEYRSLA 
Sbjct: 1097 SETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSSTEAEYRSLAS 1156

Query: 634  CATEVIWIRNLLTELHVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVN 455
              +E++W+++LL+EL   +   PVIW DNI   +L++NPV HSR KH+ELD++F+REKV 
Sbjct: 1157 LTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVM 1216

Query: 454  DGILTVQHVPSIDQTADALTKPLSKQSFTRFRSRLNIVPTPLHGSD 317
            +  L V HVP+ DQ AD  TKPLS + F + R +L +    L   D
Sbjct: 1217 ERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTVASLDLKNGD 1262


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  820 bits (2118), Expect = 0.0
 Identities = 426/922 (46%), Positives = 580/922 (62%), Gaps = 13/922 (1%)
 Frame = -3

Query: 3070 WHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFDL 2891
            WH RLGH  + ++  VL +CNL  S N     FC++C   KS + P + SQT +  P D+
Sbjct: 364  WHTRLGHPNSHVLKLVLTQCNL-LSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDV 422

Query: 2890 VHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNKK 2711
            + TDLWGPS   + +G  YYV FID  +KYTWIY LK+K+E +  F  FK + E QFN K
Sbjct: 423  IFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTK 482

Query: 2710 IKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSGV 2531
            IK++QSDWGGEYR  ++FL  +GI HRV CP+T  QNGV ERK+RH+VE+GL LL H+ +
Sbjct: 483  IKSVQSDWGGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASL 542

Query: 2530 SQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNAN 2351
               +W  AF +AVYLINR PS  L F  P+  LF+  P Y  L+ FGC CFP +RPY ++
Sbjct: 543  PLKFWDFAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASH 602

Query: 2350 KLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEIQQTQHXX 2171
            KL FR+   +FLGY   +KGYK L  SG+I +++ V+F E  FP+       + Q     
Sbjct: 603  KLNFRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQN---- 658

Query: 2170 XXXXXXXXPLTSSLYNSKNTD-DNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVEL- 1997
                     ++   Y + N D   PC                  +S     ++  +  + 
Sbjct: 659  ---------VSPCQYFNLNPDLSPPCTTSTVLSQQPPLPSQIGDSSVSIIPSVSSSQNVS 709

Query: 1996 PALEESSQTNIMPQIDSVVP-------NTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQ 1838
            P+  ESS  N+     S  P       N HPMQTR K+G   PR+  +L     EP +++
Sbjct: 710  PSSPESSSQNVSSPTSSTAPASIPRTINNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVK 769

Query: 1837 EALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARL 1658
            +AL    W +AM+ EYNALM N TW LV LP+D++ VGCKWV+++K++ADGS  + KARL
Sbjct: 770  QALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARL 829

Query: 1657 VAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYM 1478
            VAKG+ Q  GFD+ ETFSPV+K +TIR++ +L +T  W + QLDVNNAFLNG LE+ IYM
Sbjct: 830  VAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYM 889

Query: 1477 EQPHGFEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNT 1298
             QP GFE G+++LVCKL+KA+YGLKQAPR W++KLK  L + GF  S+ D SLF  +  T
Sbjct: 890  VQPPGFEAGDKSLVCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQT 949

Query: 1297 SXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTH-AKSGLHLC 1121
                         ITG++   I  + + LD  FSLK LG + +FLGIEV H     L L 
Sbjct: 950  HTIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLT 1009

Query: 1120 QQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPD 941
            Q +Y++DLL + N++ A G+  PM S+  LS++  D   D T +RSV+G LQY T+TRP+
Sbjct: 1010 QSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPE 1069

Query: 940  IVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSS---SLQITGYSDSDWA 770
            I ++VNK+ QFM  PLDSHW AVKR+L+YL  T +YGL    ++    + +T + D+DWA
Sbjct: 1070 ISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWA 1129

Query: 769  TDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL 590
            +D+DDR+S +G  ++ G NL+SW S+KQ  ++RSSTEAEYRS+A  + E+ WI+ LL EL
Sbjct: 1130 SDIDDRRSTSGSAIFFGPNLISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQEL 1189

Query: 589  HVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQT 410
             VP   TP +  DN  A A+A NPVFHS+ KH+E+DV F+R+KV    L V H+P++DQ 
Sbjct: 1190 KVPF-STPTLLCDNQSAVAIAHNPVFHSKTKHMEIDVFFVRDKVLSKQLLVYHIPALDQW 1248

Query: 409  ADALTKPLSKQSFTRFRSRLNI 344
            AD LTKPLS   F   R++L +
Sbjct: 1249 ADLLTKPLSAARFEVLRNKLKV 1270


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  820 bits (2118), Expect = 0.0
 Identities = 426/922 (46%), Positives = 580/922 (62%), Gaps = 13/922 (1%)
 Frame = -3

Query: 3070 WHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFDL 2891
            WH RLGH  + ++  VL +CNL  S N     FC++C   KS + P + SQT +  P D+
Sbjct: 443  WHTRLGHPNSHVLKLVLTQCNL-LSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDV 501

Query: 2890 VHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNKK 2711
            + TDLWGPS   + +G  YYV FID  +KYTWIY LK+K+E +  F  FK + E QFN K
Sbjct: 502  IFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTK 561

Query: 2710 IKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSGV 2531
            IK++QSDWGGEYR  ++FL  +GI HRV CP+T  QNGV ERK+RH+VE+GL LL H+ +
Sbjct: 562  IKSVQSDWGGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASL 621

Query: 2530 SQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNAN 2351
               +W  AF +AVYLINR PS  L F  P+  LF+  P Y  L+ FGC CFP +RPY ++
Sbjct: 622  PLKFWDFAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASH 681

Query: 2350 KLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFPFKTQTTAEIQQTQHXX 2171
            KL FR+   +FLGY   +KGYK L  SG+I +++ V+F E  FP+       + Q     
Sbjct: 682  KLNFRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQN---- 737

Query: 2170 XXXXXXXXPLTSSLYNSKNTD-DNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVEL- 1997
                     ++   Y + N D   PC                  +S     ++  +  + 
Sbjct: 738  ---------VSPCQYFNLNPDLSPPCTTSTVLSQQPPLPSQIGDSSVSIIPSVSSSQNVS 788

Query: 1996 PALEESSQTNIMPQIDSVVP-------NTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQ 1838
            P+  ESS  N+     S  P       N HPMQTR K+G   PR+  +L     EP +++
Sbjct: 789  PSSPESSSQNVSSPTSSTAPASIPRTINNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVK 848

Query: 1837 EALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARL 1658
            +AL    W +AM+ EYNALM N TW LV LP+D++ VGCKWV+++K++ADGS  + KARL
Sbjct: 849  QALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARL 908

Query: 1657 VAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYM 1478
            VAKG+ Q  GFD+ ETFSPV+K +TIR++ +L +T  W + QLDVNNAFLNG LE+ IYM
Sbjct: 909  VAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYM 968

Query: 1477 EQPHGFEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNT 1298
             QP GFE G+++LVCKL+KA+YGLKQAPR W++KLK  L + GF  S+ D SLF  +  T
Sbjct: 969  VQPPGFEAGDKSLVCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQT 1028

Query: 1297 SXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTH-AKSGLHLC 1121
                         ITG++   I  + + LD  FSLK LG + +FLGIEV H     L L 
Sbjct: 1029 HTIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLT 1088

Query: 1120 QQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPD 941
            Q +Y++DLL + N++ A G+  PM S+  LS++  D   D T +RSV+G LQY T+TRP+
Sbjct: 1089 QSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPE 1148

Query: 940  IVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSS---SLQITGYSDSDWA 770
            I ++VNK+ QFM  PLDSHW AVKR+L+YL  T +YGL    ++    + +T + D+DWA
Sbjct: 1149 ISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWA 1208

Query: 769  TDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL 590
            +D+DDR+S +G  ++ G NL+SW S+KQ  ++RSSTEAEYRS+A  + E+ WI+ LL EL
Sbjct: 1209 SDIDDRRSTSGSAIFFGPNLISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQEL 1268

Query: 589  HVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQT 410
             VP   TP +  DN  A A+A NPVFHS+ KH+E+DV F+R+KV    L V H+P++DQ 
Sbjct: 1269 KVPF-STPTLLCDNQSAVAIAHNPVFHSKTKHMEIDVFFVRDKVLSKQLLVYHIPALDQW 1327

Query: 409  ADALTKPLSKQSFTRFRSRLNI 344
            AD LTKPLS   F   R++L +
Sbjct: 1328 ADLLTKPLSAARFEVLRNKLKV 1349


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  818 bits (2114), Expect = 0.0
 Identities = 445/983 (45%), Positives = 605/983 (61%), Gaps = 16/983 (1%)
 Frame = -3

Query: 3244 TLLQGTL-KNGLYKFE-----LSQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            TLL+G L ++GLY F       +    N  Q  +FSK                   K+  
Sbjct: 444  TLLEGHLGEDGLYHFHPHLATKTSSNTNIEQNLIFSKPDPCIFLSEKCNSVVPNTYKQ-- 501

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECNLDY-SMNKISPTFCTACLQSKSHKQPFTESQTEHL 2906
                WH RLGH  +D + R L+ CN+   ++NKIS  FC +C  +KSH+ P   S T + 
Sbjct: 502  ----WHLRLGHPHHDSLTRALQTCNIRLPTVNKISD-FCDSCCIAKSHRLPSHPSTTIYS 556

Query: 2905 EPFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVET 2726
            +P +LV  D+WGP+   ++ G  Y++T +D  TKY WIY L+ KS+    F +FK L E 
Sbjct: 557  KPLELVFLDVWGPASLESSCGYLYFLTCVDACTKYVWIYLLRRKSDVFSNFQNFKALAEK 616

Query: 2725 QFNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALL 2546
            QF   +K++Q+D GGE+R + +F  + GI+HR++CPYT  QNG  ER++RH+VE+GLA+L
Sbjct: 617  QFQLPLKSVQTDGGGEFRALISFFQQEGILHRLTCPYTHHQNGTVERRHRHIVELGLAML 676

Query: 2545 AHSGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIR 2366
             HS +  N+W  AF +A YLINR PS  +GF+SPY+++ H  P YT LKVFGC CFP +R
Sbjct: 677  HHSTLPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHHKDPDYTFLKVFGCSCFPLLR 736

Query: 2365 PYNANKLQFRAVPSIFLGYCEGYKGYKVLLPSGKIIMNRHVVFVETTFP----FKTQTTA 2198
            PYN +KLQ R+   +FLGY   +KGYK L  SG+I +++ V+F E  FP    F T T+ 
Sbjct: 737  PYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYISKDVIFNEGRFPYHDLFVTATSD 796

Query: 2197 EIQQTQHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDT 2018
             I  T              +SS   S     N                   + S ++  +
Sbjct: 797  SIPATSVSTLPSLVCSHNPSSSTLVSPTVPTN-------------------SGSSESNFS 837

Query: 2017 IPLAVELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQ 1838
            +P   +  +      ++  P + +   N HPM TR K G L+PR+  TL+ + +EP +++
Sbjct: 838  LPSMPDNSSTNSPPASSSSPSLSAPPLNIHPMITRSKNGILQPRLNPTLLLSNVEPKTVK 897

Query: 1837 EALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARL 1658
             AL    W +AM+ E  AL  N TWTLV LP  ++ +GCKWV+++K++ DGS  + KARL
Sbjct: 898  SALTDPHWLSAMQAELTALHDNHTWTLVDLPPGRKSIGCKWVFRLKENPDGSINKYKARL 957

Query: 1657 VAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYM 1478
            VAKG+ Q PG D+ ETFSPVVK VTIR+V SL VT  W ++QLD+NNAFLNG LE+DIYM
Sbjct: 958  VAKGFHQQPGVDFSETFSPVVKPVTIRIVLSLAVTFQWPLRQLDINNAFLNGMLEEDIYM 1017

Query: 1477 EQPHGF-EKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTN 1301
             QP GF E  +++LVCKL K++YGLKQAPRAW+ +L  VL +LGF  S+ D SLF   T 
Sbjct: 1018 SQPPGFIEPNSKHLVCKLHKSLYGLKQAPRAWFDRLTSVLLKLGFHKSKCDPSLFIFSTP 1077

Query: 1300 TSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSG-LHL 1124
            ++            +TGN+   +   I+ L  +FSLKDLG + +FLGIEV    +G L L
Sbjct: 1078 SAIVYMLIYVDDIILTGNSSSLMQQFINHLHATFSLKDLGTLDYFLGIEVKSLSNGRLLL 1137

Query: 1123 CQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRP 944
             Q +Y+ DLL +V M  +KG   PM+    L+K  G    D TLYRSV+G LQY TITRP
Sbjct: 1138 SQHKYISDLLTKVKMEDSKGISTPMIGGQQLAK-TGTLFNDPTLYRSVVGALQYATITRP 1196

Query: 943  DIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFT---KSSSLQITGYSDSDW 773
            +I +SVNK+SQFM +P++ HWK VKR+LRYL  T  +GL+FT    SSS  +T ++D+DW
Sbjct: 1197 EIAFSVNKVSQFMCSPMEEHWKVVKRILRYLKGTLKHGLVFTPARSSSSFNLTAFTDADW 1256

Query: 772  ATDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTE 593
            A D +DR+S +  C+YLG NLVSW SKKQ  V+RSSTEAEYR+LA   TEV+WI++LL E
Sbjct: 1257 AADPNDRRSTSAACIYLGPNLVSWWSKKQLLVARSSTEAEYRALAQAVTEVLWIQSLLQE 1316

Query: 592  LHVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQ 413
            L +    TP++  DN    AL+ NPV HSR KH+ELD+ F+REKV    L V H+PS  Q
Sbjct: 1317 LKIRF-NTPMVLCDNQSTVALSHNPVLHSRSKHMELDIFFVREKVISKALVVSHIPSQHQ 1375

Query: 412  TADALTKPLSKQSFTRFRSRLNI 344
             AD LTK LS + F   RS+LN+
Sbjct: 1376 YADLLTKALSPKRFLSLRSKLNV 1398


>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  806 bits (2082), Expect = 0.0
 Identities = 425/920 (46%), Positives = 576/920 (62%), Gaps = 8/920 (0%)
 Frame = -3

Query: 3070 WHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFDL 2891
            WH RLGH   D +  VLK CN+  + NK    FC +C   KSH+ P   SQ+ +  P +L
Sbjct: 514  WHHRLGHTNLDTMNNVLKSCNMP-TFNKNKTDFCISCCLGKSHRLPSQLSQSTYNSPLEL 572

Query: 2890 VHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNKK 2711
            ++ DLWGP+P +++ G  YY++FID  +KY W+YFL  KSE +  F  FK L E Q N K
Sbjct: 573  IYCDLWGPAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAELQLNTK 632

Query: 2710 IKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSGV 2531
            IK IQSDWGGE+R+ +++L + GI+HR+ CP+T  QNGV ERK+RH+VE+GL+LL+HS +
Sbjct: 633  IKAIQSDWGGEFRSFTSYLSQLGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSHSSL 692

Query: 2530 SQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNAN 2351
              +YW  AF +AVY+INR P+       P +VLF++ P Y  L+ FGC C+P + PYN  
Sbjct: 693  PYHYWDHAFHTAVYIINRLPASH-NHCIPLKVLFNNVPDYNFLRAFGCACYPLLTPYNNP 751

Query: 2350 KLQFRAVPSIFLGYCEGYKGYKVL-LPSGKIIMNRHVVFVETTFPFKTQ--TTAEIQQTQ 2180
            K Q+R+   IFLGY    +GYK L   SG+I +++ V+F E  FP++    TT    QT 
Sbjct: 752  KFQYRSKECIFLGYST--RGYKCLDNKSGRIYISKDVLFNEKHFPYQITPPTTCSPNQTV 809

Query: 2179 HXXXXXXXXXXPLTSSLYNSKN-TDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAV 2003
                           + +   N T +N                   +AS     T+P   
Sbjct: 810  TSAAPLGVVNHIPQQTPHTPNNLTPNNQPTPHTPTTFPSHTSSPYISASASPTPTLPSTA 869

Query: 2002 ELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQEALHS 1823
                   S+ T+      S   NTH M TR KTGHLKP +F T+     EP ++Q+AL S
Sbjct: 870  SSTIDPNSTPTSS----PSPTTNTHHMLTRSKTGHLKPPLFPTINLTTTEPTTVQQALSS 925

Query: 1822 KEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKGY 1643
              W  AM+ EY AL  NKTW+LVPLP  KR +GCKW+++IK++ DG+  + KARLVAKG+
Sbjct: 926  IHWTEAMQQEYQALQANKTWSLVPLPPHKRAIGCKWIFRIKENPDGTINKYKARLVAKGF 985

Query: 1642 TQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPHG 1463
             Q  G DY +T+SPVVK +T+R V ++ +T  W + QLDVNNAFLNG+L +D+YM+QP G
Sbjct: 986  NQKYGQDYSDTYSPVVKPITVRTVLTIALTSKWPLIQLDVNNAFLNGQLHEDVYMQQPQG 1045

Query: 1462 FEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXXXX 1283
            F +G   LVCKL KAIYGLKQAPRAWY  L   L   GF  S+ D SL     +      
Sbjct: 1046 FIQGESTLVCKLHKAIYGLKQAPRAWYESLTNTLISFGFQQSKCDPSLLIFNKHGCCLLI 1105

Query: 1282 XXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSG-LHLCQQQYV 1106
                    ITG+++  I+ +++ L+ +FSLK LG + +FLGIE     SG LHL Q +Y+
Sbjct: 1106 LIYVDDIIITGSSNTAINLIVNKLNATFSLKQLGTLEYFLGIECKLTPSGALHLSQAKYI 1165

Query: 1105 KDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYSV 926
            +D+L+R  M   KG   P+ ++  LSK   D   + TLYRS++G LQY TITRP++ YSV
Sbjct: 1166 RDILHRAGMEDCKGISTPLPANLKLSKTGADPFDNPTLYRSIVGALQYATITRPELGYSV 1225

Query: 925  NKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIF---TKSSSLQITGYSDSDWATDLDD 755
            +K+ QF   PL SHW AVKR+LRYL  + ++GL     T S+ L I  + D+DWA+D+DD
Sbjct: 1226 SKVCQFFAQPLVSHWSAVKRILRYLKGSIDHGLTLLPATTSAPLSINAFCDADWASDIDD 1285

Query: 754  RKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTELHVPIV 575
            R+S +G C++ G NLVSW SKKQ  V++SS EAEYRSLAH A+EV+W+++LL EL VPI 
Sbjct: 1286 RRSTSGACIFFGPNLVSWWSKKQTLVAKSSAEAEYRSLAHAASEVLWLQSLLHELKVPI- 1344

Query: 574  RTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALT 395
              PVI+ DN  A A++ NPV HSR KH+ELD+ F+REKV +  L V ++P+  Q AD LT
Sbjct: 1345 PPPVIYCDNQSAVAISHNPVLHSRTKHMELDIFFVREKVLNKSLVVSYIPAQLQVADILT 1404

Query: 394  KPLSKQSFTRFRSRLNIVPT 335
            K LSK  F  FRS+L ++ T
Sbjct: 1405 KSLSKHLFYNFRSKLRVLST 1424


>gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine
            soja]
          Length = 1294

 Score =  740 bits (1910), Expect = 0.0
 Identities = 403/916 (43%), Positives = 556/916 (60%), Gaps = 6/916 (0%)
 Frame = -3

Query: 3073 TWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFD 2894
            +WH RLGH ++ I   V K  +L    NK   + C +C  SKSHK PF ES  +   P +
Sbjct: 379  SWHHRLGHPSSSIFKFVQKHFSL--GSNKFPQSDCNSCQISKSHKLPFHESTLKSCYPLE 436

Query: 2893 LVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNK 2714
            ++ +D+W  SP  + +G  YY  F+DH T+Y W+Y +K KS+    F  FK+LVE  ++ 
Sbjct: 437  IIFSDVW-TSPILSIDGLRYYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHH 495

Query: 2713 KIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSG 2534
            KIK + +D GGEY  +  FLL  GI H  + P+TP+ NG++ER+NRH+ E GL+LL HSG
Sbjct: 496  KIKILYTDNGGEYIGLRPFLLNHGISHHTTPPHTPEHNGISERRNRHIAETGLSLLHHSG 555

Query: 2533 VSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNA 2354
            +   YW  A  +A YLINR P+  LG++SPY  L +  P Y  LK FGCLCFP I+PY  
Sbjct: 556  LPLTYWPHAMTTAAYLINRLPTPILGYQSPYSKLLNISPDYHKLKCFGCLCFPWIKPYAN 615

Query: 2353 NKLQFRAVPSIFLGYCEGYKGYKVLLPS-GKIIMNRHVVFVETTFPFKTQTTAEIQQTQH 2177
            +KL  ++   +F+GY      Y  L P+ G+I  +RHV FVE+ FPF +  T      + 
Sbjct: 616  HKLAPKSAMCVFVGYSADQHAYLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQ 675

Query: 2176 XXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVEL 1997
                        T  L  S     NP                P+ A   T  T P     
Sbjct: 676  Q-----------TGPLQLSILQPMNPPEDSSPAPSSPSITNSPYMAQSSTEPTNPTQSPP 724

Query: 1996 PALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTL---MQNIIEPCSLQEALH 1826
            P  + S Q +  P    V PN   + TR K   +KP     L     + IEP ++ +AL 
Sbjct: 725  PTSQSSPQLSAPPPQTIVNPNGGGIITRSKNNIIKPIQKLNLHVQASSPIEPNTITQALR 784

Query: 1825 SKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKG 1646
              +W++AM+ E++AL  N TW LV   +D+ LVGCKWV++IK++ DGS  R KARLVAKG
Sbjct: 785  DPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWVFRIKRNPDGSIDRYKARLVAKG 844

Query: 1645 YTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPH 1466
            + Q  G+DY ETFSPVVK VTIR+V +L V  GW I+QLDVNNAFL G L+++++M QP 
Sbjct: 845  FHQRSGWDYTETFSPVVKPVTIRIVLTLAVRQGWPIRQLDVNNAFLQGTLKEEVFMIQPP 904

Query: 1465 GFEKGN-QNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXX 1289
            GF   N  + VC+L KA+YGLKQAPRAWY++L+  L  LGF  S AD SLF  +      
Sbjct: 905  GFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRIFLFSLGFVNSTADASLFIYQKPEVTL 964

Query: 1288 XXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSGLHLCQQQY 1109
                      +TGN+  E+S LI  L   FSLKDLG + +FLG+EV  + +G+ L Q++Y
Sbjct: 965  YLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCLSYFLGVEVIPSAAGMFLSQRKY 1024

Query: 1108 VKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYS 929
            + DLL++  M++ K +  P+ +S  L K  GD +     YR+++G LQY+++TRPDI +S
Sbjct: 1025 IIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPNEYRTLVGSLQYLSLTRPDIAFS 1084

Query: 928  VNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWATDLDDRK 749
             NKL+QFMQNP  +HW A+KRVLRYLA + + G+  + ++ L    YSD+DWA D DD  
Sbjct: 1085 TNKLAQFMQNPRTAHWSALKRVLRYLAGSCDKGVFISATAPLTFHAYSDADWAGDKDDYV 1144

Query: 748  SITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL-HVPIVR 572
            S TG+ +YLG+  +SW S+KQ +V+RSSTEAEY++LA  A+E++W+ +L TEL H+P   
Sbjct: 1145 STTGYLLYLGNTPISWSSRKQRSVARSSTEAEYKALADTASELLWVLSLFTELGHMPTAN 1204

Query: 571  TPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALTK 392
             PVI+ DN+GA  L++NPVFHSR+KH+ L  HF+RE V  G   V  V + DQ AD LTK
Sbjct: 1205 -PVIYCDNLGATNLSANPVFHSRMKHIALAYHFVREHVQHGKFRVSFVSTDDQLADILTK 1263

Query: 391  PLSKQSFTRFRSRLNI 344
            PL +  F    S+L++
Sbjct: 1264 PLLRPRFESLLSKLHL 1279


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score =  714 bits (1843), Expect = 0.0
 Identities = 407/988 (41%), Positives = 568/988 (57%), Gaps = 6/988 (0%)
 Frame = -3

Query: 3262 DQVTGATLLQGTLKNGLYKFELSQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            DQVT  TLL+G LK+GLY+F                  +S++ H           +   I
Sbjct: 329  DQVTKQTLLKGWLKDGLYEFP-----------------SSSSTHAFVSTSSIPALTPGAI 371

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECN--LDYSMNKISPTFCTACLQSKSHKQPFTESQTEH 2909
                WH RLGH A  I+ + L  CN  + + +NKI+P  C  C  +KSH  P++ S +  
Sbjct: 372  ----WHSRLGHPAAPILSKALAFCNPSVSFQINKIAP--CKICPLAKSHSLPYSLSSSHA 425

Query: 2908 LEPFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVE 2729
             +P  L+HTDLWGP+P  +T+ + Y++ FID  ++YTWIYFL  K +A+  F+ F+ ++E
Sbjct: 426  SQPLALIHTDLWGPAPSPSTSSARYFLLFIDDYSRYTWIYFLSTKDQALSTFITFRKMIE 485

Query: 2728 TQFNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLAL 2549
             Q N  IK IQSD GGE+     +L   GIVH+ SCP+TPQQNG A+RK RH+VE G+AL
Sbjct: 486  NQLNSTIKCIQSDNGGEFIAFKPYLEAHGIVHQFSCPHTPQQNGRAKRKIRHLVETGMAL 545

Query: 2548 LAHSGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHI 2369
            LA S +   YW  AFQ++VYLIN  P+K L F+SP +VLFH  P+Y  L+VFGCLCFP +
Sbjct: 546  LAQSFLPSKYWSFAFQTSVYLINLLPTKLLNFQSPLQVLFHKIPNYHHLRVFGCLCFPSL 605

Query: 2368 RPYNANKLQFRAVPSIFLGYCEGYKGYKVL-LPSGKIIMNRHVVFVETTFPFKTQTTAEI 2192
            RPYN +KL +R+   +FLGY   +KGY  L + + ++ ++R V+F E++FPF++   A +
Sbjct: 606  RPYNHHKLSYRSTACVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPFQS-IPAPL 664

Query: 2191 QQTQHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIP 2012
               QH          PLTS+L N       P                  T    T D++P
Sbjct: 665  PLPQH---------TPLTSALINP------PFLSTSSPPTVSFPIPTSSTDCTSTSDSLP 709

Query: 2011 LAVELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQEA 1832
              +++P     S T   P       NTHPM TR K+G  K + F  LMQ   EP +  +A
Sbjct: 710  PLLQVPFSPTPSPT---PSSSPSPLNTHPMVTRAKSGIHKKKSF--LMQTTSEPHTYSQA 764

Query: 1831 LHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVA 1652
              S+ W  AM+ EY AL++N TW+LVP P    +VGC+W+YK+K   +GS  + KARL +
Sbjct: 765  FKSEPWVQAMQHEYQALLRNHTWSLVPPPPSAHIVGCRWIYKLKYLPNGSVEKHKARLSS 824

Query: 1651 KGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQ 1472
                               +  TIR++ +L V+  W I+QLDV NAFLNG+L++++++ Q
Sbjct: 825  ------------------CEACTIRLILALAVSFQWPIRQLDVENAFLNGDLQEEVFIAQ 866

Query: 1471 PHGF-EKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTS 1295
            P GF      + VCKL KA+YGLKQAPRAW+ KL+  L   GF  S+AD SLF     + 
Sbjct: 867  PQGFVHPKYPHYVCKLHKALYGLKQAPRAWFQKLRVALVDYGFQSSRADTSLFIHHIASD 926

Query: 1294 XXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSGLHLCQQ 1115
                        +TG+N K +S+ I  L   F+L+DLG + +FLGI+     S L L QQ
Sbjct: 927  ILILLVYVDDILVTGSNPKLVSHFISYLHDKFALRDLGPLSYFLGIQAQQQGSVLDLNQQ 986

Query: 1114 QYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIV 935
            +Y+ DLL+R  M ++K +         LS+  G  + + + YR ++G LQY+T+TRPDI 
Sbjct: 987  KYIADLLHRTQMEASKPAPTLGSLGRTLSQFDGVHLPNPSEYRRIVGALQYVTLTRPDIA 1046

Query: 934  YSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWATDLDD 755
            ++VNK  QFM  P D               T +  L F  S+S+++ GYSD+DWA+  DD
Sbjct: 1047 FAVNKACQFMAKPFD--------------GTISLSLHFQPSTSMELQGYSDADWASCPDD 1092

Query: 754  RKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTELHVPIV 575
             +S +G+CV+LG NL+SW S KQ  VS+SS E+EYR L     E++WI++LL +L +P  
Sbjct: 1093 CRSTSGYCVFLGSNLISWSSSKQHLVSKSSAESEYRGLVSLTAELVWIQSLLQKLCLP-T 1151

Query: 574  RTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALT 395
              PV+W DN  A  L +NPVFHSR KH+EL++HFIREKV    L + +V S DQ  D LT
Sbjct: 1152 SPPVLWCDNQSAAHLVANPVFHSRSKHIELELHFIREKVLRQELQICYVSSTDQLVDILT 1211

Query: 394  KPLSKQSFTRFRSRLNIVPTP--LHGSD 317
            K  S   F   RS+L +  TP  L G D
Sbjct: 1212 KHFSISQFCSLRSKLTVTSTPMSLRGDD 1239


>gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1248

 Score =  697 bits (1798), Expect = 0.0
 Identities = 387/916 (42%), Positives = 538/916 (58%), Gaps = 6/916 (0%)
 Frame = -3

Query: 3073 TWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFD 2894
            +WH RLGH ++ I   V K  +L    NK   + C +C  SKSHK PF ES  +   P +
Sbjct: 368  SWHHRLGHPSSSIFKFVQKHFSL--GSNKFLQSGCNSCQISKSHKLPFHESTLKSCYPLE 425

Query: 2893 LVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNK 2714
            ++ +D+W  SP  + +G  YY  F+DH T+Y W+Y +K KS+    F  FK+LVE  ++ 
Sbjct: 426  IIFSDVW-TSPILSIDGLRYYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHH 484

Query: 2713 KIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSG 2534
            KIK + +D GGEY  +  FLL  GI H  + P+TP+ NG++ER+NRH+ E GL+LL HSG
Sbjct: 485  KIKILYTDNGGEYIGLRPFLLNHGISHHTTPPHTPEHNGISERRNRHIAETGLSLLHHSG 544

Query: 2533 VSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNA 2354
            +   YW  A  +A YLINR P+  LG++SPY  L +  P Y  LK FGCLCFP I+PY  
Sbjct: 545  LPLTYWPHAMTTAAYLINRLPTPILGYQSPYSKLLNISPDYHKLKCFGCLCFPWIKPYAN 604

Query: 2353 NKLQFRAVPSIFLGYCEGYKGYKVLLPS-GKIIMNRHVVFVETTFPFKTQTTAEIQQTQH 2177
            +KL  ++   +F+GY      Y  L P+ G+I  +RHV FVE+ FPF +  T      + 
Sbjct: 605  HKLAPKSAMCVFVGYSADQHAYLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQ 664

Query: 2176 XXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVEL 1997
                        T  L  S     NP                P+ A   T  T P     
Sbjct: 665  Q-----------TGPLQLSILQPMNPPEDSSPAPSSPSITNSPYMAQSSTEPTNPTQSPP 713

Query: 1996 PALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTL---MQNIIEPCSLQEALH 1826
            P  + S Q +  P    V PN   + TR K   +KP     L     + IEP ++ +AL 
Sbjct: 714  PTSQSSPQLSAPPPQTIVNPNGGGIITRSKNNIIKPIQKLNLHVQASSPIEPNTITQALR 773

Query: 1825 SKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKG 1646
              +W++AM+ E++AL  N TW LV   +D+ LVGCKWV++IK++ DGS  R KARLVAKG
Sbjct: 774  DPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWVFRIKRNPDGSIDRYKARLVAKG 833

Query: 1645 YTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPH 1466
            + Q P                        V  GW I+QLDVNNAFL G L+++++M QP 
Sbjct: 834  FHQRP------------------------VRQGWPIRQLDVNNAFLQGTLKEEVFMIQPP 869

Query: 1465 GFEKGN-QNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXX 1289
            GF   N  + VC+L KA+YGLKQAPRAWY++L+  L  LGF  S AD SLF  +      
Sbjct: 870  GFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRVFLLSLGFVNSTADASLFIYQKPEVTL 929

Query: 1288 XXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSGLHLCQQQY 1109
                      +TGN+  E+S LI  L   FSLKDLG + +FLG+EV  + +G+ L Q++Y
Sbjct: 930  YLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCLSYFLGVEVIPSAAGMFLSQRKY 989

Query: 1108 VKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYS 929
            + DLL++  M++ K +  P+ +S  L K  GD +     YR+++G LQY+++TRPDI +S
Sbjct: 990  IIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPNEYRTLVGSLQYLSLTRPDIAFS 1049

Query: 928  VNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWATDLDDRK 749
             NKL+QFMQNP  +HW A+KRVLRYLA + + G+  + +++L    YSD+DWA D DD  
Sbjct: 1050 TNKLAQFMQNPRTAHWSALKRVLRYLAGSCDKGVFISATTALTFHAYSDADWAGDKDDYV 1109

Query: 748  SITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL-HVPIVR 572
            S TG+ +YLG+  +SW S+KQ +V+RSSTEAEY++LA  A+E++W+ +L TEL H+P   
Sbjct: 1110 STTGYLLYLGNTPISWSSRKQRSVARSSTEAEYKALADTASELLWVLSLFTELGHMPTAN 1169

Query: 571  TPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALTK 392
             PVI+ DN+GA  L++NPVFHSR+KH+ L  HF+RE V  G   V  V + DQ AD LTK
Sbjct: 1170 -PVIYCDNLGATNLSANPVFHSRMKHIALAYHFVREHVQHGKFRVSFVSTDDQLADILTK 1228

Query: 391  PLSKQSFTRFRSRLNI 344
            PL +  F    S+L++
Sbjct: 1229 PLLRPRFESLLSKLHL 1244


>emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]
          Length = 1539

 Score =  702 bits (1811), Expect = 0.0
 Identities = 394/938 (42%), Positives = 542/938 (57%), Gaps = 4/938 (0%)
 Frame = -3

Query: 3262 DQVTGATLLQGTLKNGLYKFELSQVKANSPQPGVFSKATSTTRHXXXXXXXXXXXSKKRI 3083
            DQVT  TLL+G L++GLY+F                  +S++ H           +   I
Sbjct: 647  DQVTKQTLLKGWLRDGLYEFP-----------------SSSSTHAFVSTSSVPALTPGAI 689

Query: 3082 GLDTWHCRLGHAANDIVLRVLKECN--LDYSMNKISPTFCTACLQSKSHKQPFTESQTEH 2909
                WH RLGH    I+ + L  CN  + + +NKI+P     C Q               
Sbjct: 690  ----WHSRLGHPXXPILSKALASCNPSVSFQINKIAP-----CAQ--------------- 725

Query: 2908 LEPFDLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVE 2729
                                    Y++ FID  ++YTWIYFL  K +A+  F+  + ++E
Sbjct: 726  ------------------------YFLIFIDDYSRYTWIYFLSTKDQALSTFITIRKMIE 761

Query: 2728 TQFNKKIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLAL 2549
             Q N  IK IQSD GGE+     +L   GIVH+  CP+T QQNG AERK  H+VE G+AL
Sbjct: 762  NQLNSTIKCIQSDNGGEFIAFKPYLEAHGIVHQFLCPHTAQQNGRAERKICHLVETGMAL 821

Query: 2548 LAHSGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHI 2369
            LA S +   YW  AFQ++VYLIN  P+K L F+SP +VLFH  P+Y  L+VF CLCFP +
Sbjct: 822  LAQSFLPSKYWSFAFQTSVYLINLLPAKLLNFQSPLQVLFHKIPNYHHLRVFACLCFPSL 881

Query: 2368 RPYNANKLQFRAVPSIFLGYCEGYKGYKVL-LPSGKIIMNRHVVFVETTFPFKTQTTAEI 2192
            RPYN +KL +R+   +FLGY   +KGY  L + + ++ ++R V+F E++FPF++   A  
Sbjct: 882  RPYNHHKLSYRSTACVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPFQS-IPAPS 940

Query: 2191 QQTQHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIP 2012
               QH           LTS+L N       P                  T    T D++P
Sbjct: 941  PLPQHTP---------LTSALINP------PLLSTSSPSTMSFPVPTSSTDCTSTSDSLP 985

Query: 2011 LAVELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLMQNIIEPCSLQEA 1832
              +++P     S T   P   S   NTHPM TR K+G  K + F  LMQ   EP +  +A
Sbjct: 986  PLLQVPFAPTPSPT---PSSSSSPLNTHPMVTRVKSGIHKKKSF--LMQTTSEPHTYNQA 1040

Query: 1831 LHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVA 1652
              S+ W  AM+ EY AL++N TW+LVP P    +VGC+W+YK+K   +GS  R KARLVA
Sbjct: 1041 SKSEPWDQAMQHEYQALLRNHTWSLVPPPPSAHIVGCRWIYKLKYLPNGSVERHKARLVA 1100

Query: 1651 KGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQ 1472
            +G+T+TPG DY +TFSP+VK  TIR++ +L V+  W I+QLDV N FLNG+L+++++M Q
Sbjct: 1101 QGFTKTPGVDYFDTFSPIVKPCTIRLILTLAVSFQWPIRQLDVENXFLNGDLQEEVFMAQ 1160

Query: 1471 PHGFEKGNQ-NLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTS 1295
            P GF      + VCKL KA+YGLKQAPR W+ KL+  L   GF  S+AD SLF   T ++
Sbjct: 1161 PQGFVHPQYPHYVCKLYKALYGLKQAPRVWFQKLRVALVDYGFQSSRADTSLFIHHTASN 1220

Query: 1294 XXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSGLHLCQQ 1115
                        +TG+N K +S+ I  L   F+L+DLG + +FLGI+     S LHL QQ
Sbjct: 1221 ILILLVYVDDILVTGSNPKLVSHFISYLHDKFALRDLGPLSYFLGIQAQQQGSVLHLNQQ 1280

Query: 1114 QYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIV 935
            +Y+ DLL+R  M ++K +  P      LS++ G  + D + YR ++G LQY+T+TR DI 
Sbjct: 1281 KYIVDLLHRTQMEASKPTPTPGSLGRTLSQSDGVPLPDPSEYRRIVGALQYVTLTRLDIA 1340

Query: 934  YSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWATDLDD 755
            ++VNK  QFM  P D HW A+KR+LRYL  T + GL F  S+S+++ GYSD DWA+  DD
Sbjct: 1341 FAVNKACQFMAKPSDVHWLAIKRILRYLKGTISLGLHFQPSTSMELQGYSDVDWASCPDD 1400

Query: 754  RKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTELHVPIV 575
            R+S +G+ V+LG NL+SW S KQ  VS+S+ E+EYR L     E++WI++LL EL +P  
Sbjct: 1401 RRSTSGYYVFLGSNLISWSSSKQRLVSKSNAESEYRGLVSLTAELVWIQSLLQELCLP-T 1459

Query: 574  RTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREK 461
              PV+W DN  A  L +NPVFHSR KH+ELD+HFIREK
Sbjct: 1460 SPPVLWCDNQSAAHLVANPVFHSRSKHIELDLHFIREK 1497


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  678 bits (1750), Expect = 0.0
 Identities = 382/937 (40%), Positives = 529/937 (56%), Gaps = 18/937 (1%)
 Frame = -3

Query: 3076 DTWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPF 2897
            + WH RLGHA +  +  +     +  + ++ SP  C  C   KS + PF  S +  L P 
Sbjct: 454  EVWHHRLGHANSKALQHLQNSKAIQINKSRTSPV-CEPCQMGKSSRLPFLISDSRVLHPL 512

Query: 2896 DLVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFN 2717
            D +H DLWGPSP  +  G  YY  F+D  ++Y+W Y L  KSE +  F+ F+ LVE Q N
Sbjct: 513  DRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLN 572

Query: 2716 KKIKTIQSDWGGEY--RNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLA 2543
             KIK  QSD GGE+    +   L + GI HR+SCPYTPQQNG+AERK+RH+VE+GL++L 
Sbjct: 573  TKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLF 632

Query: 2542 HSGVSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRP 2363
            HS   Q +W+E+F +A Y+INR PS  L   SPYE LF  KP Y+SL+VFG  C+P +RP
Sbjct: 633  HSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRP 692

Query: 2362 YNANKLQFRAVPSIFLGYCEGYKGYKVLLP-SGKIIMNRHVVFVETTFPFKTQ------- 2207
               NK   R++  +FLGY   YKGY+   P +GK+ ++R+V+F E+  PFK +       
Sbjct: 693  LAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYISRNVIFNESELPFKEKYQSLVPQ 752

Query: 2206 -TTAEIQQTQHXXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKD 2030
             +T  +Q  QH                  SK  D N                  +    D
Sbjct: 753  YSTPLLQAWQHNKISEISVPAAPVQLF--SKPIDLNTYAGSQVTEQLTDPEPTSNNEGSD 810

Query: 2029 TYDTIPLAVELPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTLM---QNI 1859
              +  P+A E+ A +E             V N+H M TR K G  KP     L+    N 
Sbjct: 811  E-EVNPVAEEIAANQEQ------------VINSHAMTTRSKAGIQKPNTRYALITSRMNT 857

Query: 1858 IEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSF 1679
             EP +L  A+    W  A+  E N +    TW+LVP   D  ++  KWV+K K H DGS 
Sbjct: 858  AEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSI 917

Query: 1678 ARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGE 1499
             + KARLVAKG+ Q  G DYLETFSPVV+  TIR+V  +  + GW IKQLDV+NAFL+GE
Sbjct: 918  DKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVSNAFLHGE 977

Query: 1498 LEQDIYMEQPHGF-EKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNS 1322
            L++ ++M QP GF +      VC+L+KAIYGLKQAPRAW+      L   GF  S++D S
Sbjct: 978  LQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPS 1037

Query: 1321 LFFRKTNTSXXXXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHA 1142
            LF    +              +TG++   + +L+  L   FS+KDLG   +FLGI++   
Sbjct: 1038 LFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFLGIQIEDY 1097

Query: 1141 KSGLHLCQQQYVKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQY 962
             +GL L Q  Y  D+L +  MS       P+     L     +  A+ T +RS+ G LQY
Sbjct: 1098 ANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQQ--LDNLNSELFAEPTYFRSLAGKLQY 1155

Query: 961  ITITRPDIVYSVNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSD 782
            +TITRPDI ++VN + Q M +P  S +  +KR+LRY+  T   GL   ++S+L ++ YSD
Sbjct: 1156 LTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNSTLTLSAYSD 1215

Query: 781  SDWATDLDDRKSITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNL 602
            SD A   + R+S TGFC+ LG NL+SW +K+Q TVS SSTEAEYR+L + A E+ WI  L
Sbjct: 1216 SDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAAREITWISFL 1275

Query: 601  LTELHVPIVRTPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPS 422
            L +L +P      ++ DN+ A  L++NP  H+R KH + D H+IRE+V  G++  QH+ +
Sbjct: 1276 LRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLIETQHISA 1335

Query: 421  IDQTADALTKPLSKQSFTRFRSRLNI--VPTP-LHGS 320
              Q AD  TK L +++F   RS+L +   PTP L GS
Sbjct: 1336 TFQLADVFTKSLPRRAFVDLRSKLGVSGSPTPSLRGS 1372


>gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1235

 Score =  672 bits (1733), Expect = 0.0
 Identities = 381/916 (41%), Positives = 528/916 (57%), Gaps = 6/916 (0%)
 Frame = -3

Query: 3073 TWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFD 2894
            +WH RLGH ++ I   V K  +L    NK   + C +C  SKSHK PF ES  +   P +
Sbjct: 366  SWHHRLGHPSSSIFKFVQKHFSL--GSNKFPQSDCNSCQISKSHKLPFHESTLKSCYPLE 423

Query: 2893 LVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNK 2714
            ++ +D+W  SP  + +G  YY  F+DH T+Y W+Y +K KS+    F  FK+LVE  ++ 
Sbjct: 424  IIFSDVW-TSPILSIDGLRYYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHH 482

Query: 2713 KIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSG 2534
            KIK + +D GGEY  +  FLL  GI H  + P+TP+ NG++ER+NRH+ E GL+LL HSG
Sbjct: 483  KIKILYTDNGGEYIGLRPFLLNHGISHHTTPPHTPEHNGISERRNRHIAETGLSLLHHSG 542

Query: 2533 VSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNA 2354
            +   YW  A  +A YLINR P+  LG++SPY  L +  P Y  LK FGCLCFP I+PY  
Sbjct: 543  LPLTYWPHAMTTAAYLINRLPTPILGYQSPYSKLLNISPDYHKLKCFGCLCFPWIKPYAN 602

Query: 2353 NKLQFRAVPSIFLGYCEGYKGYKVLLP-SGKIIMNRHVVFVETTFPFKTQTTAEIQQTQH 2177
            +KL  ++   +F+GY      Y  L P +G+I  +RHV FVE+ FPF +  T      + 
Sbjct: 603  HKLAPKSAMCVFVGYSADQHAYLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQ 662

Query: 2176 XXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVEL 1997
                        T  L  S     NP                P+ A   T  T P     
Sbjct: 663  Q-----------TGPLQLSILQPMNPPEDSSPAPSSPSITNSPYMAQSSTEPTNPTQSPP 711

Query: 1996 PALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTL---MQNIIEPCSLQEALH 1826
            P  + S Q +  P    V PN   + TR K   +KP     L     + IEP ++ +AL 
Sbjct: 712  PTSQSSPQLSAPPPQTIVNPNGGGIITRSKNNIIKPIQKLNLHVQASSPIEPNTITQALR 771

Query: 1825 SKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKG 1646
              +W++AM+ E++AL  N TW LV   +D+ LVGCKWV++IK++ DGS  R KARLVAKG
Sbjct: 772  DPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWVFRIKRNPDGSIDRYKARLVAKG 831

Query: 1645 YTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPH 1466
            + Q                          V  GW I+QLDVNNAFL G L+++++M QP 
Sbjct: 832  FHQRS------------------------VRQGWPIRQLDVNNAFLQGTLKEEVFMIQPP 867

Query: 1465 GF-EKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXX 1289
            GF  K   + VC+L KA+YGLKQAPRAWY++L+  L  LGF  S AD SLF  +      
Sbjct: 868  GFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRVFLLSLGFVNSTADASLFIYQKPEVTL 927

Query: 1288 XXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSGLHLCQQQY 1109
                      +TGN+  E+S LI  L   FSLKDLG + +FLG+EV  + +G+ L Q++Y
Sbjct: 928  YLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCLSYFLGVEVIPSAAGMFLSQRKY 987

Query: 1108 VKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYS 929
            + DLL++  M++ K +  P+ +S  L K  GD +     YR+++G LQY+++TRPDI +S
Sbjct: 988  IIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPNEYRTLVGSLQYLSLTRPDIAFS 1047

Query: 928  VNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWATDLDDRK 749
             NKL+QFMQNP  +HW A+KRVLRYLA + + G+  + ++ L    YSD+DWA D DD  
Sbjct: 1048 TNKLAQFMQNPRTAHWSALKRVLRYLAGSCDKGVFISATAPLTFHAYSDADWAGDKDDYV 1107

Query: 748  SITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL-HVPIVR 572
            S TG+            S+KQ +V+RSSTEAEY++LA  A+E++W+ +L TEL H+P   
Sbjct: 1108 STTGY-----------FSRKQRSVARSSTEAEYKALADTASELLWVLSLFTELGHMP-TA 1155

Query: 571  TPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALTK 392
             PVI+ DN+GA  L++NPVFHSR+KH+ L  HF+RE V  G   V  V + DQ AD LTK
Sbjct: 1156 NPVIYCDNLGATNLSANPVFHSRMKHIALAYHFVREHVQHGKFRVSFVSTDDQLADILTK 1215

Query: 391  PLSKQSFTRFRSRLNI 344
            PL +  F    S+L++
Sbjct: 1216 PLLRPRFESLLSKLHL 1231


>gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1237

 Score =  672 bits (1733), Expect = 0.0
 Identities = 381/916 (41%), Positives = 528/916 (57%), Gaps = 6/916 (0%)
 Frame = -3

Query: 3073 TWHCRLGHAANDIVLRVLKECNLDYSMNKISPTFCTACLQSKSHKQPFTESQTEHLEPFD 2894
            +WH RLGH ++ I   V K  +L    NK   + C +C  SKSHK PF ES  +   P +
Sbjct: 368  SWHHRLGHPSSSIFKFVQKHFSL--GSNKFPQSDCNSCQISKSHKLPFHESTLKSCYPLE 425

Query: 2893 LVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNK 2714
            ++ +D+W  SP  + +G  YY  F+DH T+Y W+Y +K KS+    F  FK+LVE  ++ 
Sbjct: 426  IIFSDVW-TSPILSIDGLRYYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHH 484

Query: 2713 KIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSG 2534
            KIK + +D GGEY  +  FLL  GI H  + P+TP+ NG++ER+NRH+ E GL+LL HSG
Sbjct: 485  KIKILYTDNGGEYIGLRPFLLNHGISHHTTPPHTPEHNGISERRNRHIAETGLSLLHHSG 544

Query: 2533 VSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNA 2354
            +   YW  A  +A YLINR P+  LG++SPY  L +  P Y  LK FGCLCFP I+PY  
Sbjct: 545  LPLTYWPHAMTTAAYLINRLPTPILGYQSPYSKLLNISPDYHKLKCFGCLCFPWIKPYAN 604

Query: 2353 NKLQFRAVPSIFLGYCEGYKGYKVLLP-SGKIIMNRHVVFVETTFPFKTQTTAEIQQTQH 2177
            +KL  ++   +F+GY      Y  L P +G+I  +RHV FVE+ FPF +  T      + 
Sbjct: 605  HKLAPKSAMCVFVGYSADQHAYLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQ 664

Query: 2176 XXXXXXXXXXPLTSSLYNSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVEL 1997
                        T  L  S     NP                P+ A   T  T P     
Sbjct: 665  Q-----------TGPLQLSILQPMNPPEDSSPAPSSPSITNSPYMAQSSTEPTNPTQSPP 713

Query: 1996 PALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRVFSTL---MQNIIEPCSLQEALH 1826
            P  + S Q +  P    V PN   + TR K   +KP     L     + IEP ++ +AL 
Sbjct: 714  PTSQSSPQLSAPPPQTIVNPNGGGIITRSKNNIIKPIQKLNLHVQASSPIEPNTITQALR 773

Query: 1825 SKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKG 1646
              +W++AM+ E++AL  N TW LV   +D+ LVGCKWV++IK++ DGS  R KARLVAKG
Sbjct: 774  DPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWVFRIKRNPDGSIDRYKARLVAKG 833

Query: 1645 YTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPH 1466
            + Q                          V  GW I+QLDVNNAFL G L+++++M QP 
Sbjct: 834  FHQRS------------------------VRQGWPIRQLDVNNAFLQGTLKEEVFMIQPP 869

Query: 1465 GF-EKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXX 1289
            GF  K   + VC+L KA+YGLKQAPRAWY++L+  L  LGF  S AD SLF  +      
Sbjct: 870  GFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRVFLLSLGFVNSTADASLFIYQKPEVTL 929

Query: 1288 XXXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSGLHLCQQQY 1109
                      +TGN+  E+S LI  L   FSLKDLG + +FLG+EV  + +G+ L Q++Y
Sbjct: 930  YLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCLSYFLGVEVIPSAAGMFLSQRKY 989

Query: 1108 VKDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYS 929
            + DLL++  M++ K +  P+ +S  L K  GD +     YR+++G LQY+++TRPDI +S
Sbjct: 990  IIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPNEYRTLVGSLQYLSLTRPDIAFS 1049

Query: 928  VNKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWATDLDDRK 749
             NKL+QFMQNP  +HW A+KRVLRYLA + + G+  + ++ L    YSD+DWA D DD  
Sbjct: 1050 TNKLAQFMQNPRTAHWSALKRVLRYLAGSCDKGVFISATAPLTFHAYSDADWAGDKDDYV 1109

Query: 748  SITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTEL-HVPIVR 572
            S TG+            S+KQ +V+RSSTEAEY++LA  A+E++W+ +L TEL H+P   
Sbjct: 1110 STTGY-----------FSRKQRSVARSSTEAEYKALADTASELLWVLSLFTELGHMP-TA 1157

Query: 571  TPVIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALTK 392
             PVI+ DN+GA  L++NPVFHSR+KH+ L  HF+RE V  G   V  V + DQ AD LTK
Sbjct: 1158 NPVIYCDNLGATNLSANPVFHSRMKHIALAYHFVREHVQHGKFRVSFVSTNDQLADILTK 1217

Query: 391  PLSKQSFTRFRSRLNI 344
            PL +  F    S+L++
Sbjct: 1218 PLLRPRFESLLSKLHL 1233


>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1115

 Score =  638 bits (1645), Expect = 0.0
 Identities = 352/914 (38%), Positives = 522/914 (57%), Gaps = 5/914 (0%)
 Frame = -3

Query: 3070 WHCRLGHAANDIVLRVLKECNLDYS-MNKISPTFCTACLQSKSHKQPFTESQTEHLEPFD 2894
            WH RLGH +++     L   N  +  ++K S   C  C  +K  K  ++ S +   + FD
Sbjct: 196  WHFRLGHLSSNR----LNVLNQQFPFISKHSNEVCDVCHFAKQKKLSYSPSSSRVSKIFD 251

Query: 2893 LVHTDLWGPSPKRATNGSHYYVTFIDHNTKYTWIYFLKAKSEAIQAFLHFKTLVETQFNK 2714
            L+H D+WGP  K + +G  Y++T +D  ++YTW+  LK+KSE      +F  LVE Q+  
Sbjct: 252  LIHMDIWGPFSKASIHGHKYFLTILDDFSRYTWVVLLKSKSEVKTHVHNFINLVENQYET 311

Query: 2713 KIKTIQSDWGGEYRNISAFLLKSGIVHRVSCPYTPQQNGVAERKNRHVVEVGLALLAHSG 2534
            K+K I+SD G E+  +  F    GI+H+ SC YTPQQNG  ERK++H++ V  AL+  S 
Sbjct: 312  KVKCIRSDNGPEFF-LRDFFNSKGIIHQTSCVYTPQQNGRVERKHQHILNVARALMFQSK 370

Query: 2533 VSQNYWLEAFQSAVYLINRTPSKKLGFKSPYEVLFHHKPSYTSLKVFGCLCFPHIRPYNA 2354
            +  N+W  A + A++LINR PS  +  K+P+E+L    P ++ LKVFGCLC+        
Sbjct: 371  LPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLNKIPPDFSMLKVFGCLCYASTHNQR- 429

Query: 2353 NKLQFRAVPSIFLGYCEGYKGYKVL-LPSGKIIMNRHVVFVETTFPFKTQTTAEIQQTQH 2177
            +K + R+   IF+G+  G KG+ +L + + +I+++R+V+F ET+FPF T        TQ 
Sbjct: 430  HKFEPRSRKGIFMGFQNGTKGFVILDINTREILVSRNVIFHETSFPFHTSAPTSPFITQP 489

Query: 2176 XXXXXXXXXXPLTSSLY-NSKNTDDNPCXXXXXXXXXXXXXXXPHTASKDTYDTIPLAVE 2000
                        T     N  +   NP                  + S     T P    
Sbjct: 490  SLTISPNPDILTTPPTSPNDTSPSQNP------------NPDASASPSSPAAPTSPFHDS 537

Query: 1999 LPALEESSQTNIMPQIDSVVPNTHPMQTRGKTGHLKPRV--FSTLMQNIIEPCSLQEALH 1826
            + +   S+  +I+P   S  P   P +   +  H  P +  +   + ++    S   ++ 
Sbjct: 538  ISSYPTSTDFDIVPHHRSSSPAIPPPRRSERDIHPPPYLSEYQYKLPSLKSVQSSTRSIQ 597

Query: 1825 SKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWVYKIKKHADGSFARCKARLVAKG 1646
            +  W+ AM  E  AL  N TW +V  P+  R +GCKWV+KIK+  +GS  R KARLVAKG
Sbjct: 598  NPCWREAMTCELKALELNHTWDVVETPSHVRPIGCKWVFKIKRLPNGSIERYKARLVAKG 657

Query: 1645 YTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQLDVNNAFLNGELEQDIYMEQPH 1466
            Y+Q  G DY ETFSPVVK  T+RVV +L     W I+QLDV+NAFL+G+L +D+YME P 
Sbjct: 658  YSQIEGIDYFETFSPVVKMTTVRVVLALASINQWHIQQLDVSNAFLHGDLLEDVYMELPQ 717

Query: 1465 GFEKGNQNLVCKLSKAIYGLKQAPRAWYSKLKQVLQQLGF*FSQADNSLFFRKTNTSXXX 1286
            G    + +  CKL K++YGLKQ+ R WY KL  +L   G+  + +D+SLF ++  ++   
Sbjct: 718  GLTGYSSSHSCKLRKSLYGLKQSSRKWYEKLSNLLLSNGYKQAHSDHSLFTKRHGSAFTA 777

Query: 1285 XXXXXXXXXITGNNDKEISNLIHLLDVSFSLKDLGMVHHFLGIEVTHAKSGLHLCQQQYV 1106
                     +TGN+  EI+ + H+L  +F +KDLG + +FLGIEV H+  G+ LCQ++Y 
Sbjct: 778  LLIYVDDIVLTGNSAAEITRIKHILHSNFHVKDLGQLKYFLGIEVAHSSKGISLCQRKYC 837

Query: 1105 KDLLNRVNMSSAKGSLIPMVSSPNLSKAVGDSVADGTLYRSVIGGLQYITITRPDIVYSV 926
             DLL+   M   K S  PM S+  L       + D   YR ++G L Y+T TRPDI +S 
Sbjct: 838  LDLLSDSGMLGCKPSSTPMDSTLRLHDDASGYLDDPLPYRRLVGRLVYLTNTRPDIAFST 897

Query: 925  NKLSQFMQNPLDSHWKAVKRVLRYLAATPNYGLIFTKSSSLQITGYSDSDWATDLDDRKS 746
             +LSQFM  P ++H  A  RVLRYL + P  GL F +   +Q++G+SD+DWAT +  R+S
Sbjct: 898  QQLSQFMSKPTNAHHAAAMRVLRYLKSCPGTGLFFPRVCPIQVSGFSDADWATCVASRRS 957

Query: 745  ITGFCVYLGDNLVSWCSKKQATVSRSSTEAEYRSLAHCATEVIWIRNLLTELHVPIVRTP 566
            ITG+C ++G+ L+SW +KKQ TVSRSS+EAEYR+LA    E+ WI  LL +LH+ + +  
Sbjct: 958  ITGYCFFIGNALISWKTKKQTTVSRSSSEAEYRALASATCELQWIIYLLRDLHISLSQIS 1017

Query: 565  VIWTDNIGAEALASNPVFHSRIKHVELDVHFIREKVNDGILTVQHVPSIDQTADALTKPL 386
            +++ DN  A  +A+NPVFH R KH+++D H +REK   G++ +  VPS  Q AD  TK L
Sbjct: 1018 LLYCDNTSALHIAANPVFHERTKHLDIDCHIVREKTQAGLMKLLPVPSAKQLADIFTKAL 1077

Query: 385  SKQSFTRFRSRLNI 344
               +F    S+L +
Sbjct: 1078 PPHAFKLNLSKLQL 1091