BLASTX nr result
ID: Rehmannia27_contig00007024
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00007024
(583 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1... 105 3e-55
gb|AFK49064.1| unknown [Lotus japonicus] 113 8e-43
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 142 3e-41
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 130 2e-36
ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococ... 114 1e-29
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 104 3e-26
gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium ... 104 4e-26
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m... 103 6e-26
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab... 82 2e-17
gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max] 80 1e-16
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays] 79 2e-16
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 81 4e-16
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata] 77 9e-16
gb|KVI11330.1| Ribosomal protein S12/S23 [Cynara cardunculus var... 79 2e-15
gb|EEF42577.1| conserved hypothetical protein [Ricinus communis] 63 2e-15
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 71 1e-14
gb|KVG87221.1| hypothetical protein Ccrd_026132, partial [Cynara... 75 2e-14
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 71 1e-13
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 70 8e-13
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, p... 66 2e-11
>emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1| Putative 8.8 kDa
protein in rps12-tRNA-Val intergenic region [Glycine
soja]
Length = 143
Score = 105 bits (263), Expect(3) = 3e-55
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = -1
Query: 169 TDTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 2
TDTQF+VSKQNSILD+IDTYRIL KAVFDESRMYGLEGDLSYLSRSTLQYG KKPK
Sbjct: 88 TDTQFQVSKQNSILDIIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGAKKPK 143
Score = 101 bits (252), Expect(3) = 3e-55
Identities = 53/62 (85%), Positives = 54/62 (87%)
Frame = -3
Query: 434 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 255
MRQKIFFLK+FDSEL YVQG I K FQRFSLTLSVSTNNSK LDFFR GPSQIAMIRST
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60
Query: 254 FY 249
Y
Sbjct: 61 HY 62
Score = 56.2 bits (134), Expect(3) = 3e-55
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -2
Query: 252 LHNFGNPRTQSYGYVKYRISNPSRKGG 172
LH FGNPRTQSYGYVKYRISNPSRK G
Sbjct: 60 LHYFGNPRTQSYGYVKYRISNPSRKRG 86
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 113 bits (283), Expect(2) = 8e-43
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = -1
Query: 175 RETDTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 2
RETDTQF+VSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYG KKPK
Sbjct: 71 RETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGAKKPK 128
Score = 87.8 bits (216), Expect(2) = 8e-43
Identities = 48/71 (67%), Positives = 52/71 (73%)
Frame = -2
Query: 390 LICPRFNIEIISEVFPDFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHNFGNPRTQSYGY 211
+ICPR NIE ISEVF DFVRVNKQFE+PRLF R + LH F N RTQSYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 210 VKYRISNPSRK 178
VKYRISNPS+K
Sbjct: 59 VKYRISNPSKK 69
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
gi|32480905|ref|NP_862814.1| hypothetical protein
CafeCp092 [Calycanthus floridus var. glaucus]
gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region (chloroplast) [Calycanthus floridus
var. glaucus] gi|32399427|emb|CAD28768.1| hypothetical
protein [Calycanthus floridus var. glaucus]
gi|32399441|emb|CAD28782.1| hypothetical protein
[Calycanthus floridus var. glaucus]
Length = 75
Score = 142 bits (359), Expect = 3e-41
Identities = 73/75 (97%), Positives = 73/75 (97%)
Frame = -3
Query: 434 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 255
MRQKIFFLKRFDSELLYVQGSILK FQRFSLTLSVSTNNSKYLDFFRTGPSQIA IRSTS
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60
Query: 254 FYTISETQGLNRMDM 210
FYTISETQGLNRMDM
Sbjct: 61 FYTISETQGLNRMDM 75
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] gi|58802847|gb|AAW82567.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 130 bits (327), Expect = 2e-36
Identities = 67/75 (89%), Positives = 67/75 (89%)
Frame = +1
Query: 253 KEVLRIIAI*LGPVLKKSRYFELFVDTDKVRENL*NYFNIEPWTYKSSESNLFRKKIFCL 432
KEVLRIIAI LGPVLKKSRYFELFVDTDK RENL NY NI PWTY SSESNLFRKK FCL
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62
Query: 433 MVACSSPLTKLSLLG 477
MVACSSPL KLSLLG
Sbjct: 63 MVACSSPLPKLSLLG 77
>ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
gi|836614536|ref|YP_009145127.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521025|gb|AKJ85882.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521026|gb|AKJ85883.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
Length = 121
Score = 114 bits (286), Expect = 1e-29
Identities = 60/80 (75%), Positives = 65/80 (81%)
Frame = -1
Query: 241 RKPKDSIVWICKIQDFQS*QEGRETDTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGL 62
+KP + K + ++ RETDTQFKVSKQNSILDLIDTYRIL KAVFDESRMYGL
Sbjct: 42 KKPNSASYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGL 101
Query: 61 EGDLSYLSRSTLQYGVKKPK 2
EGDLSYLSRSTLQYGVKKPK
Sbjct: 102 EGDLSYLSRSTLQYGVKKPK 121
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
gi|134093268|ref|YP_001109569.1| hypothetical protein
Poptr_cp092 [Populus trichocarpa]
gi|133712111|gb|ABO36754.1| conserved hypothetical
protein [Populus trichocarpa]
gi|133712130|gb|ABO36773.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 65
Score = 104 bits (259), Expect = 3e-26
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -3
Query: 344 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNRMDM*NTGFPILAGREG 171
+TLSVSTNNSK LDFFR GPSQIAMIRSTSFYTISETQGLNRMDM NTGFPILAG+ G
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGG 58
>gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium distachyon]
Length = 84
Score = 104 bits (259), Expect = 4e-26
Identities = 62/90 (68%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -3
Query: 434 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 255
MRQKI FLKRFDSELLY RFSLTLSVSTNNSKYLDFFRTGPS +AMIRSTS
Sbjct: 1 MRQKILFLKRFDSELLY----------RFSLTLSVSTNNSKYLDFFRTGPS-LAMIRSTS 49
Query: 254 F--YTISETQGLNRMDM*NTGFPILAGREG 171
F I +++ +RMDM NTGF ILAG+ G
Sbjct: 50 FSITLIRKSKDSDRMDMENTGFSILAGKGG 79
>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
Length = 57
Score = 103 bits (256), Expect = 6e-26
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = -1
Query: 166 DTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 2
DTQFKVSKQNSILDLID YRIL KAVFDESRMYGLEGDLSY+SRSTLQYG KKPK
Sbjct: 2 DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKPK 56
>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 81.6 bits (200), Expect = 2e-17
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -3
Query: 344 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNRMDM 210
+TLSVSTNNSK LDFFRT PSQIAMIRST FYTISETQGLNRMDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max]
Length = 87
Score = 80.1 bits (196), Expect = 1e-16
Identities = 42/51 (82%), Positives = 43/51 (84%)
Frame = -3
Query: 434 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYLDFFRTGPS 282
MRQKIFFLK+FDSEL YVQG I K FQRFS TLSVSTNNSK LDFFR G S
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSWTLSVSTNNSKCLDFFRIGLS 51
>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
Length = 52
Score = 79.0 bits (193), Expect = 2e-16
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2
Query: 378 RFNIEIISEVFPDFVRVNKQFEIPRLF*NRSESNSNDSKHFFLH 247
+ N+EI+SEVFP FVRVNKQFEIPRLF NRSESNSNDSKHFF H
Sbjct: 3 KVNMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFH 46
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
gi|575882162|emb|CDL78835.1| ribosomal protein S12
(chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 80.9 bits (198), Expect = 4e-16
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = -1
Query: 124 LIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 2
+IDTYRILRKAVFDESRMYGL GDLSYLSRSTLQYGVKKPK
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKPK 156
>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
Length = 40
Score = 76.6 bits (187), Expect = 9e-16
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = -1
Query: 121 IDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 2
IDTY IL KAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 40
>gb|KVI11330.1| Ribosomal protein S12/S23 [Cynara cardunculus var. scolymus]
Length = 157
Score = 79.3 bits (194), Expect = 2e-15
Identities = 42/75 (56%), Positives = 48/75 (64%)
Frame = -2
Query: 453 GTGAGYHETKDLLSKEIRFGTLICPRFNIEIISEVFPDFVRVNKQFEIPRLF*NRSESNS 274
G GAGYHETKD LSKEI+F T+ICPRFNIE SEVFPDFV N+SESN+
Sbjct: 81 GGGAGYHETKDFLSKEIQFRTIICPRFNIEKNSEVFPDFVH------------NKSESNN 128
Query: 273 NDSKHFFLHNFGNPR 229
ND + F P+
Sbjct: 129 NDFEALLFMLFRKPK 143
>gb|EEF42577.1| conserved hypothetical protein [Ricinus communis]
Length = 286
Score = 63.2 bits (152), Expect(2) = 2e-15
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +2
Query: 86 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPF 181
EYGF QNSICIYEIEYGILFTHFKLSI PPF
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPF 263
Score = 46.2 bits (108), Expect(2) = 2e-15
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 172 PSLPARIGNPVFYISIRLSPWVSEIV 249
P PARIGNPVFYISIRLSP VS+IV
Sbjct: 261 PPFPARIGNPVFYISIRLSPRVSKIV 286
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 71.2 bits (173), Expect(2) = 1e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 77 TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPF 181
TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPF
Sbjct: 2 TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPF 36
Score = 35.4 bits (80), Expect(2) = 1e-14
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +1
Query: 169 FPSLPARIGNPVFYISIRLSP 231
FP PAR GNPVF ISIR SP
Sbjct: 33 FPPFPARTGNPVFSISIRSSP 53
>gb|KVG87221.1| hypothetical protein Ccrd_026132, partial [Cynara cardunculus var.
scolymus]
Length = 113
Score = 75.5 bits (184), Expect = 2e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 361 YFNIEPWTYKSSESNLFRKKIFCLMVACSSPLTKLS 468
+FNIEPWTY SSESNLFRKKIFCLMVACSSPLTKLS
Sbjct: 32 FFNIEPWTYNSSESNLFRKKIFCLMVACSSPLTKLS 67
>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
koraiensis]
Length = 40
Score = 71.2 bits (173), Expect = 1e-13
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = -2
Query: 117 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMG*KSQN 1
+ IE CGKPYS KVVCT WREIFH FRDPPYNM KSQN
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQN 39
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
gi|150251552|ref|YP_001312284.1| hypothetical protein
CYtaCp120 [Cycas taitungensis]
gi|149941571|dbj|BAF64995.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|149941602|dbj|BAF65026.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 69.7 bits (169), Expect = 8e-13
Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = +3
Query: 180 SC*DWKSCILHIHTIESLGFRNCVKR-SASNHCYLTRTCSKKVEVF 314
SC DWKS ILHI TI+SLG + VK+ S SNHCYLTRTCSKKVEVF
Sbjct: 19 SCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64
>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, partial [Sorghum
bicolor]
Length = 67
Score = 66.2 bits (160), Expect = 2e-11
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -3
Query: 374 SILK*FQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 255
SI K F+RFSLTLSVSTN+SKYLDF R GPSQIAMIRSTS
Sbjct: 9 SIWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTS 48