BLASTX nr result
ID: Rehmannia27_contig00006887
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00006887
(963 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AJE29370.1| putative gag protein [Coffea canephora] 53 5e-18
ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612... 46 2e-11
ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobrom... 55 2e-11
ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobrom... 52 4e-10
ref|XP_007026864.1| Adenine nucleotide alpha hydrolases-like sup... 52 3e-09
ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobrom... 63 3e-09
ref|XP_010245685.1| PREDICTED: uncharacterized protein LOC104589... 52 6e-08
ref|XP_007024836.1| Leucine-rich repeat transmembrane protein ki... 48 2e-07
ref|XP_010277636.1| PREDICTED: uncharacterized protein LOC104612... 46 2e-07
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 41 9e-07
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 41 1e-06
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 43 5e-06
>gb|AJE29370.1| putative gag protein [Coffea canephora]
Length = 433
Score = 53.1 bits (126), Expect(3) = 5e-18
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS 747
G+GVVKIKM +G R+LGGVAYVPK+R NLIS Q+DS
Sbjct: 323 GVGVVKIKMLNGEIRSLGGVAYVPKLRRNLISLNQLDS 360
Score = 45.1 bits (105), Expect(3) = 5e-18
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3
Query: 961 CIMHVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
C+ HV SR +YFD LQ ++AG + GDGS C++ G+
Sbjct: 289 CVSHVCSRLDYFDTLQRKKAGFMCLGDGSTCQVKGV 324
Score = 41.2 bits (95), Expect(3) = 5e-18
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = -1
Query: 735 YSAGGGVLKVTHGGRVLRVREKYRNLYRLVTSRITGSGSAPEGFQGTDGCEGNPAGREDG 556
+SA GVLK+T+G VL + +KY NLY L TS + Q T+G E +G
Sbjct: 365 FSAASGVLKITYGETVLLMGKKYGNLYHLNTSMDWEQNGIQKCSQITNGGERKNPAMGEG 424
Query: 555 LGSSLSAVN 529
LS VN
Sbjct: 425 ELRPLSRVN 433
>ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612030 [Nelumbo nucifera]
Length = 201
Score = 46.2 bits (108), Expect(3) = 2e-11
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -2
Query: 857 IGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDSNSCDI 732
+G +KIKM D V TLGG YV KM NLIS Q+DS C +
Sbjct: 67 VGTMKIKMFDRVVHTLGGATYVSKMCRNLISLSQLDSKECKV 108
Score = 36.6 bits (83), Expect(3) = 2e-11
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 961 CIMHVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
C MH++ R+ YFD Q ++ ++ GD S C IM +
Sbjct: 32 CSMHIFFRKEYFDTFQERKTCVVSLGDESTCNIMSV 67
Score = 33.9 bits (76), Expect(3) = 2e-11
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 747 QQLRYSAGGGVLKVTHGGRVLRVREKYRNLYRLVTSRI 634
++ + A GG +K+T G VL EK + LY LV S I
Sbjct: 104 KECKVFAAGGAIKITRGDMVLMKEEKCKGLYHLVKSTI 141
>ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobroma cacao]
gi|508710053|gb|EOY01950.1| Uncharacterized protein
TCM_011728 [Theobroma cacao]
Length = 176
Score = 55.1 bits (131), Expect(3) = 2e-11
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 5/47 (10%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS-----NSCD 735
GI VVKIKM DGV R+LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 47 GIRVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGFGYSACD 93
Score = 32.3 bits (72), Expect(3) = 2e-11
Identities = 32/88 (36%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Frame = -1
Query: 735 YSAGGGVLKVTHGGRVLRVREKYRNLYRLVT------SRITGSGS-------APEGFQGT 595
YSA GV+KVT G VL + LYRL + TG GS A E +G+
Sbjct: 89 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFAEEVMKGS 148
Query: 594 DGCEG-----NPAGRE-DGLGSSLSAVN 529
G + N A E +G SLS VN
Sbjct: 149 HGVDDGERTKNLASSELEGSSRSLSEVN 176
Score = 29.3 bits (64), Expect(3) = 2e-11
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -3
Query: 952 HVYSRRNYFDLLQLQRAGILFSGDGSICRIMGLEW*KSK 836
H+ +++ FDLLQ AG L G+ SI ++MG+ K K
Sbjct: 16 HICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGIRVVKIK 54
>ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobroma cacao]
gi|508713925|gb|EOY05822.1| Uncharacterized protein
TCM_020722 [Theobroma cacao]
Length = 218
Score = 52.4 bits (124), Expect(3) = 4e-10
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS-----NSCD 735
G+ VVKIKM DGV +LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 89 GLAVVKIKMFDGVVLSLGGVAYVPKMRKNLISLSLLDSKGYGYSACD 135
Score = 30.4 bits (67), Expect(3) = 4e-10
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 952 HVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
H+ +++ FDLLQ AG L G+ SI ++MGL
Sbjct: 58 HICYQKDCFDLLQEGMAGNLTLGNKSIVKVMGL 90
Score = 29.6 bits (65), Expect(3) = 4e-10
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = -1
Query: 735 YSAGGGVLKVTHGGRVLRVREKYRNLYRLVT------SRITGSGSAPEGFQGTDGCEGNP 574
YSA GV+KVT G VL + LYRL + TG GS + +
Sbjct: 131 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFVEEVMKDS 190
Query: 573 AGREDG 556
G +DG
Sbjct: 191 HGVDDG 196
>ref|XP_007026864.1| Adenine nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao] gi|508715469|gb|EOY07366.1| Adenine
nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao]
Length = 434
Score = 52.0 bits (123), Expect(3) = 3e-09
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS-----NSCD 735
G+ VVKIKM DGV R+LGGVAYVPKM NLIS +DS ++CD
Sbjct: 305 GLVVVKIKMFDGVVRSLGGVAYVPKMHKNLISLSLLDSKGYGYSACD 351
Score = 30.0 bits (66), Expect(3) = 3e-09
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 952 HVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
H+ ++N FDLLQ G L G+ SI ++MGL
Sbjct: 274 HICYQKNCFDLLQEGVTGNLTLGNKSIVKVMGL 306
Score = 27.3 bits (59), Expect(3) = 3e-09
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Frame = -1
Query: 735 YSAGGGVLKVTHGGRVLRVREKYRNLYRLVT------SRITGSGSAPEGFQGTDGCEGNP 574
YSA GV+KVT G VL + LY L + TG GS + +
Sbjct: 347 YSACDGVVKVTQGDMVLMRGNLHNGLYHLECEASKGWEQCTGDGSYQSEISLAEEVMKDS 406
Query: 573 AGREDG 556
G +DG
Sbjct: 407 HGVDDG 412
>ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobroma cacao]
gi|508727037|gb|EOY18934.1| Uncharacterized protein
TCM_043452 [Theobroma cacao]
Length = 166
Score = 62.8 bits (151), Expect(2) = 3e-09
Identities = 37/62 (59%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDSNSCDIQL--EVES*KSHMAEGS 687
GIGVVKIKM DGV R+LGGVAYVPKMR NLIS +DS DI L V+ MA+
Sbjct: 47 GIGVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGSDITLFFNVKGNNQQMADSE 106
Query: 686 *G 681
G
Sbjct: 107 EG 108
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 952 HVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
H+ +++ FDLLQ G L G+ SI ++MG+
Sbjct: 16 HICYQKDCFDLLQEVVVGNLTLGNKSIVKVMGI 48
>ref|XP_010245685.1| PREDICTED: uncharacterized protein LOC104589163 [Nelumbo nucifera]
Length = 263
Score = 52.4 bits (124), Expect(2) = 6e-08
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDSNSCDI 732
G+G +KIKM DGV TLGGVAYVPKM NLIS +D C +
Sbjct: 186 GVGTMKIKMFDGVVHTLGGVAYVPKMCRNLISLSWLDYKRCKV 228
Score = 33.1 bits (74), Expect(2) = 6e-08
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 940 RRNYFDLLQLQRAGILFSGDGSICRIMGL 854
R+ Y D LQ ++ G++ GDGS C I G+
Sbjct: 159 RKEYLDTLQERKTGVVSLGDGSTCNITGV 187
>ref|XP_007024836.1| Leucine-rich repeat transmembrane protein kinase [Theobroma cacao]
gi|508780202|gb|EOY27458.1| Leucine-rich repeat
transmembrane protein kinase [Theobroma cacao]
Length = 1179
Score = 47.8 bits (112), Expect(3) = 2e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLIS 765
G+ VVKIKM DGV R+L G+AYVPKMR NLIS
Sbjct: 1075 GLEVVKIKMFDGVVRSLDGMAYVPKMRKNLIS 1106
Score = 32.0 bits (71), Expect(3) = 2e-07
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 952 HVYSRRNYFDLLQLQRAGILFSGDGSICRIMGLEW*KSK 836
H+ +++ FDLLQ AG L G+ SI ++MGLE K K
Sbjct: 1044 HICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGLEVVKIK 1082
Score = 23.5 bits (49), Expect(3) = 2e-07
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 735 YSAGGGVLKVTHGGRVLRVREKYRNLYRL 649
YSA GV+KVT VL + LY L
Sbjct: 1117 YSACDGVVKVTQRDMVLMRGNLHNGLYHL 1145
>ref|XP_010277636.1| PREDICTED: uncharacterized protein LOC104612027 [Nelumbo nucifera]
Length = 276
Score = 46.2 bits (108), Expect(3) = 2e-07
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -2
Query: 857 IGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDSNSCDI 732
+G +KIKM D V TLGG YV KM NLIS Q+DS C +
Sbjct: 142 VGTMKIKMFDRVVHTLGGATYVSKMCRNLISLSQLDSKECKV 183
Score = 28.9 bits (63), Expect(3) = 2e-07
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 747 QQLRYSAGGGVLKVTHGGRVLRVREKYRNLYRLVTSRI 634
++ + A GG +K+T VL EK + LY LV I
Sbjct: 179 KECKVFAVGGAIKITRANMVLMKEEKCKGLYHLVKRTI 216
Score = 27.7 bits (60), Expect(3) = 2e-07
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 943 SRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
S++ YFD Q ++ ++ GD S C IM +
Sbjct: 113 SKKEYFDTFQERKTCVVSLGDESTCNIMNV 142
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 41.2 bits (95), Expect(3) = 9e-07
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 750
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 547 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583
Score = 31.2 bits (69), Expect(3) = 9e-07
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 738 RYSAGGGVLKVTHGGR-VLRVREKYRNLYRLVTSRITGSGSA 616
+YS G G+LKVT G V++ K NLY L + I G+ +A
Sbjct: 588 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 629
Score = 28.1 bits (61), Expect(3) = 9e-07
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 961 CIMHVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
CI H+ R++F + + G + GD + C + G+
Sbjct: 513 CIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGI 548
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 41.2 bits (95), Expect(3) = 1e-06
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 750
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 340 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 31.2 bits (69), Expect(3) = 1e-06
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 738 RYSAGGGVLKVTHGGR-VLRVREKYRNLYRLVTSRITGSGSA 616
+YS G G+LKVT G V++ K NLY L + I G+ +A
Sbjct: 381 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 422
Score = 28.1 bits (61), Expect(3) = 1e-06
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 961 CIMHVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
CI H+ R++F + + G + GD + C + G+
Sbjct: 306 CIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGI 341
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 43.1 bits (100), Expect(3) = 5e-06
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2
Query: 860 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDSNSC 738
GIG V I M DG RTL V +VP+M+ NLIS +D+N C
Sbjct: 332 GIGSVDITMFDGTVRTLSKVRHVPEMKKNLISLGTLDNNGC 372
Score = 32.0 bits (71), Expect(3) = 5e-06
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -1
Query: 738 RYSAGGGVLKVTHGGRVLRVREKYRNLYRLVTSRITGSGSAPEGFQGTD 592
+Y A GGVL V G VL K +LY L S ++GS + G D
Sbjct: 373 KYIAEGGVLNVIRGALVLMKGIKRGSLYVLQGSMVSGSANVSTGTMSDD 421
Score = 22.7 bits (47), Expect(3) = 5e-06
Identities = 8/36 (22%), Positives = 18/36 (50%)
Frame = -3
Query: 961 CIMHVYSRRNYFDLLQLQRAGILFSGDGSICRIMGL 854
C HV ++ F + G + G+ + C+++G+
Sbjct: 298 CSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGI 333