BLASTX nr result
ID: Rehmannia27_contig00005184
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00005184
(829 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011100504.1| PREDICTED: DNA-directed RNA polymerases II a... 273 2e-90
ref|XP_012856851.1| PREDICTED: DNA-directed RNA polymerases II a... 268 1e-88
gb|KVH94956.1| Nucleic acid-binding, OB-fold, partial [Cynara ca... 248 7e-80
ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II a... 234 2e-75
ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II a... 234 3e-75
ref|XP_009587855.1| PREDICTED: DNA-directed RNA polymerases II a... 233 9e-75
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II a... 233 1e-74
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases II a... 232 2e-74
ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, ... 220 9e-70
ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, ... 219 4e-69
ref|XP_015644253.1| PREDICTED: DNA-directed RNA polymerases II, ... 218 5e-68
ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, ... 213 5e-67
ref|XP_006656430.1| PREDICTED: DNA-directed RNA polymerases II, ... 213 5e-67
ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II a... 212 2e-66
ref|XP_010041065.1| PREDICTED: DNA-directed RNA polymerases II, ... 212 2e-66
ref|XP_010057738.1| PREDICTED: DNA-directed RNA polymerases II, ... 211 5e-66
ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, ... 209 2e-65
emb|CDP01497.1| unnamed protein product [Coffea canephora] 209 2e-65
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 218 2e-65
ref|NP_001147399.1| uncharacterized protein LOC100281008 [Zea ma... 209 3e-65
>ref|XP_011100504.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Sesamum indicum]
Length = 145
Score = 273 bits (697), Expect = 2e-90
Identities = 133/145 (91%), Positives = 142/145 (97%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVETLFEDIFRVD +DPDGKKFDRVSRI+ARSEQFDML+HLD+N EIYPMR GEKFMMVL
Sbjct: 1 MVETLFEDIFRVDAVDPDGKKFDRVSRIAARSEQFDMLLHLDVNIEIYPMRVGEKFMMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPD+GYYTPGNRKSLADKFDYVMQGKLY+ISEETREKQVKAD+YVSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYYTPGNRKSLADKFDYVMQGKLYKISEETREKQVKADIYVSFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
MLKGDPSIA+RFELDQ+LFILLRKV
Sbjct: 121 MLKGDPSIASRFELDQRLFILLRKV 145
>ref|XP_012856851.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Erythranthe guttata] gi|604302218|gb|EYU21804.1|
hypothetical protein MIMGU_mgv1a015806mg [Erythranthe
guttata]
Length = 145
Score = 268 bits (685), Expect = 1e-88
Identities = 133/145 (91%), Positives = 140/145 (96%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVETLFEDIFRVD LDPDGKKFDRVSRISARSEQFDMLM LDINTEIYPMR G+KFMMVL
Sbjct: 1 MVETLFEDIFRVDELDPDGKKFDRVSRISARSEQFDMLMFLDINTEIYPMRTGDKFMMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPDSGY+ PGN+KSLADKFDYVMQGKLYRISEE+REKQVKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDSGYFAPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIFVSFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
LKGDPSIAARFELDQKLFIL+RKV
Sbjct: 121 QLKGDPSIAARFELDQKLFILIRKV 145
>gb|KVH94956.1| Nucleic acid-binding, OB-fold, partial [Cynara cardunculus var.
scolymus]
Length = 191
Score = 248 bits (632), Expect = 7e-80
Identities = 123/158 (77%), Positives = 136/158 (86%)
Frame = -2
Query: 747 HSFEFLFSVVTMVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYP 568
H EF + MVETLFEDIF VD LDPDGKKFDRV+RI ARS+QFDM M LD+NTE+YP
Sbjct: 33 HRGEFYTAAERMVETLFEDIFMVDQLDPDGKKFDRVNRIEARSDQFDMYMLLDVNTEVYP 92
Query: 567 MRAGEKFMMVLASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKA 388
M GEKFMMVLASTLNLDGTPDSG++TPG RKSLADKFDYVM GKLYRISEE VKA
Sbjct: 93 MHVGEKFMMVLASTLNLDGTPDSGFFTPGGRKSLADKFDYVMHGKLYRISEEGSGANVKA 152
Query: 387 DMYVSFGGLLMMLKGDPSIAARFELDQKLFILLRKV*K 274
D+YVSFGGLLM+L+GDPSIAA+FELDQ+LFIL+RKV K
Sbjct: 153 DIYVSFGGLLMLLRGDPSIAAKFELDQRLFILMRKVDK 190
>ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nicotiana tomentosiformis]
gi|697124414|ref|XP_009616201.1| PREDICTED: DNA-directed
RNA polymerases II and V subunit 8A-like [Nicotiana
tomentosiformis] gi|697124416|ref|XP_009616202.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Nicotiana tomentosiformis]
Length = 145
Score = 234 bits (598), Expect = 2e-75
Identities = 117/145 (80%), Positives = 128/145 (88%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVETLFEDIF V DPDGKKFDRV+RI ARSEQFDM M LD+NTEIYPMR EKFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMYMLLDVNTEIYPMRVKEKFMMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPD+GY+ GN+KSLADKF+YVM GKLYRISEE K VKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
L+GDPSIAA+FELDQKLF+LLRKV
Sbjct: 121 QLRGDPSIAAKFELDQKLFLLLRKV 145
>ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nicotiana sylvestris]
Length = 145
Score = 234 bits (597), Expect = 3e-75
Identities = 116/145 (80%), Positives = 128/145 (88%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVETLFEDIF V DPDGKKFDRV+RI ARSEQFDM M LD+NTEIYPMR EKFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMYMLLDVNTEIYPMRVKEKFMMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPD+GY+ GN+KSLADKF+Y+M GKLYRISEE K VKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYIMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
L+GDPSIAA+FELDQKLF+LLRKV
Sbjct: 121 QLRGDPSIAAKFELDQKLFLLLRKV 145
>ref|XP_009587855.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nicotiana tomentosiformis]
Length = 145
Score = 233 bits (594), Expect = 9e-75
Identities = 115/145 (79%), Positives = 128/145 (88%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVETLFEDIF V DPDGKKFDRV+RI ARSEQFDM M LD+NTEIYPMR EKFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMYMLLDVNTEIYPMRVKEKFMMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPD+GY+ GN+KSLADKF+YVM GKLYRISEE K VKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMNGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
L+GDPSIAA+FELDQK+F+L+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Solanum tuberosum]
Length = 145
Score = 233 bits (593), Expect = 1e-74
Identities = 115/145 (79%), Positives = 128/145 (88%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVETLFEDIF V DPDGKKFDRV+RI ARSEQFDM M LDINTEIYPMR +KFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPD+GY+ GN+KSLADKF+YVM GKLYRISEE K VKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
L+GDPSIAA+FELDQK+F+L+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Solanum lycopersicum] gi|460377396|ref|XP_004234479.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Solanum lycopersicum]
gi|970013705|ref|XP_015067827.1| PREDICTED: DNA-directed
RNA polymerases II and V subunit 8A-like [Solanum
pennellii] gi|970013707|ref|XP_015067828.1| PREDICTED:
DNA-directed RNA polymerases II and V subunit 8A-like
[Solanum pennellii]
Length = 145
Score = 232 bits (592), Expect = 2e-74
Identities = 114/145 (78%), Positives = 128/145 (88%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVETLFEDIF V DPDGKKFDRV+RI ARSEQFDM M LD+NTEIYPMR +KFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPD+GY+ GN+KSLADKF+YVM GKLYRISEE K VKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
L+GDPSIAA+FELDQK+F+L+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Phoenix dactylifera]
Length = 145
Score = 220 bits (561), Expect = 9e-70
Identities = 106/145 (73%), Positives = 122/145 (84%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVE LFEDIF + LDPDGKKFD+V+RI ARSEQFDM M LD+NTE+YP+ G+KF MVL
Sbjct: 1 MVELLFEDIFTLTRLDPDGKKFDKVTRIEARSEQFDMSMQLDVNTEVYPLHVGDKFTMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
A TL+LDGTPDSGYYT G RKSLADKF+YVM GKLY+ISEE+ VK ++Y SFGGLLM
Sbjct: 61 APTLSLDGTPDSGYYTQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVELYASFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
MLKGDPS A FELDQ+LF+L+RKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145
>ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Elaeis guineensis]
Length = 145
Score = 219 bits (557), Expect = 4e-69
Identities = 106/145 (73%), Positives = 121/145 (83%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVE LFEDIF + +DPDGKKFD+VSRI ARSEQFDM M LD+NTEIYP+ G+KF MVL
Sbjct: 1 MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
A TL+LDGTPDSGYY G RKSLADKF+YVM GKLY+ISEE+ VK ++Y SFGGLLM
Sbjct: 61 APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
MLKGDPS A FELDQ+LF+L+RKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145
>ref|XP_015644253.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
[Oryza sativa Japonica Group]
gi|125556620|gb|EAZ02226.1| hypothetical protein
OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 218 bits (554), Expect = 5e-68
Identities = 108/146 (73%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVE LFEDIF V LDPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMRAG++F MVL
Sbjct: 46 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 105
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 358
A TLNLDGTPD+G+YT RK+LADKFDYVM GKLY+ISE++ Q K ++Y SFGGLL
Sbjct: 106 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 165
Query: 357 MMLKGDPSIAARFELDQKLFILLRKV 280
MMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 166 MMLKGDPSSAASFELDQRLFLLIRKV 191
>ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Musa acuminata subsp. malaccensis]
Length = 146
Score = 213 bits (543), Expect = 5e-67
Identities = 106/146 (72%), Positives = 122/146 (83%), Gaps = 1/146 (0%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVE LFEDIF + LDPDGKKFD+VSRI ARSEQFDM M LD+NTEIYP+ G+KF MVL
Sbjct: 1 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNVGDKFTMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEE-TREKQVKADMYVSFGGLL 358
TL+LDGTPDSGY+T RKSLADKF+YVM GKLY+ISEE + VK ++Y SFGGLL
Sbjct: 61 TPTLSLDGTPDSGYFTQAGRKSLADKFEYVMHGKLYKISEEASGGPNVKVEIYASFGGLL 120
Query: 357 MMLKGDPSIAARFELDQKLFILLRKV 280
MMLKGDPS AA+FELDQ+LF+L+RKV
Sbjct: 121 MMLKGDPSNAAQFELDQRLFLLMRKV 146
>ref|XP_006656430.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
gi|573948249|ref|XP_006656431.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Oryza
brachyantha] gi|1002860102|ref|XP_015694104.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like [Oryza brachyantha]
Length = 146
Score = 213 bits (543), Expect = 5e-67
Identities = 107/146 (73%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVE LFEDIF V LDPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMR G+KF MVL
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 358
A TLNLDGTPD G+YT RK+LADK+DYVM GKLY+ISE+ Q K ++Y SFGGLL
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120
Query: 357 MMLKGDPSIAARFELDQKLFILLRKV 280
MMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146
>ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nelumbo nucifera] gi|720039239|ref|XP_010268241.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Nelumbo nucifera]
Length = 145
Score = 212 bits (539), Expect = 2e-66
Identities = 104/145 (71%), Positives = 120/145 (82%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MV+ LFEDIF V +DPDGKKFD+VSRI A SEQFDM M LD+NTEIYP+R +KF MVL
Sbjct: 1 MVDLLFEDIFTVKQIDPDGKKFDKVSRIVATSEQFDMYMQLDVNTEIYPLRVDDKFTMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
A TL+LDGTPDSGYYT RKSLADKF+YVM GKLY+ISEE VK ++Y S+GGLLM
Sbjct: 61 APTLSLDGTPDSGYYTQVGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASYGGLLM 120
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
+LKGDPS AA FELDQ+LF+L+RKV
Sbjct: 121 LLKGDPSNAANFELDQRLFLLMRKV 145
>ref|XP_010041065.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Eucalyptus grandis] gi|629076444|gb|KCW44671.1|
hypothetical protein EUGRSUZ_L01795 [Eucalyptus grandis]
Length = 150
Score = 212 bits (539), Expect = 2e-66
Identities = 101/148 (68%), Positives = 125/148 (84%), Gaps = 7/148 (4%)
Frame = -2
Query: 702 LFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVLASTL 523
+ ED+F+V+ LDPDGKKFD+V+RI ARSE+FDM MHLD+NTEIYPM+ G+KF M LASTL
Sbjct: 3 ILEDVFKVERLDPDGKKFDKVTRIEARSERFDMFMHLDVNTEIYPMKEGQKFTMALASTL 62
Query: 522 NLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEE-------TREKQVKADMYVSFGG 364
N DGTPD+GYYTPGNRKSLADK++YVM GKLY+ISE+ + K VKA++YVSFGG
Sbjct: 63 NPDGTPDTGYYTPGNRKSLADKYEYVMHGKLYKISEDDPGRASKSSGKGVKAEIYVSFGG 122
Query: 363 LLMMLKGDPSIAARFELDQKLFILLRKV 280
LLMMLKGDPS +F+LDQ+LF+ +RK+
Sbjct: 123 LLMMLKGDPSNLHQFDLDQRLFLCIRKL 150
>ref|XP_010057738.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Eucalyptus grandis]
gi|629123199|gb|KCW87624.1| hypothetical protein
EUGRSUZ_A00023 [Eucalyptus grandis]
Length = 150
Score = 211 bits (537), Expect = 5e-66
Identities = 101/148 (68%), Positives = 124/148 (83%), Gaps = 7/148 (4%)
Frame = -2
Query: 702 LFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVLASTL 523
+ ED+F+V+ LDPDGKKFD+V+RI ARSE+FDM MHLD+NTEIYPM+ G+KF M LASTL
Sbjct: 3 ILEDVFKVERLDPDGKKFDKVTRIEARSERFDMFMHLDVNTEIYPMKEGQKFTMALASTL 62
Query: 522 NLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEET-------REKQVKADMYVSFGG 364
N DGTPD+GYYTPGNRKSLADK++YVM GKLY+ISE+ K VKA++YVSFGG
Sbjct: 63 NPDGTPDTGYYTPGNRKSLADKYEYVMHGKLYKISEDDPGRASKGSGKGVKAEIYVSFGG 122
Query: 363 LLMMLKGDPSIAARFELDQKLFILLRKV 280
LLMMLKGDPS +F+LDQ+LF+ +RK+
Sbjct: 123 LLMMLKGDPSNLHQFDLDQRLFLCIRKL 150
>ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
[Amborella trichopoda] gi|769794061|ref|XP_011628851.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B [Amborella trichopoda]
Length = 144
Score = 209 bits (533), Expect = 2e-65
Identities = 101/145 (69%), Positives = 122/145 (84%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVE LFEDIF + L+PDGKKFD+VSRI ARSEQFDM M LD+NTE+YP+ G+KF MVL
Sbjct: 1 MVELLFEDIFTLTKLNPDGKKFDKVSRIEARSEQFDMFMQLDVNTEVYPLNVGDKFTMVL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
A TL+LDGTPD+GY+T G RKSLADKF+YVM GKLY+ISE++ VK ++Y SFGGLLM
Sbjct: 61 APTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYKISEDS-GTNVKVEIYASFGGLLM 119
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
+L+GDPS A FELDQ+LF+L+RKV
Sbjct: 120 LLRGDPSNAVNFELDQRLFLLMRKV 144
>emb|CDP01497.1| unnamed protein product [Coffea canephora]
Length = 143
Score = 209 bits (532), Expect = 2e-65
Identities = 101/145 (69%), Positives = 126/145 (86%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
M +TLF+DIF V +DP GKKFD+V+RI A+SEQ DM MHLDINT+IYPMR G+KF+M L
Sbjct: 1 MADTLFQDIFTVQEVDPGGKKFDKVNRIVAKSEQLDMYMHLDINTDIYPMRVGDKFLMGL 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 355
ASTLNLDGTPDSGY+ G RKSLAD+++YVMQGKLY+ISEE +K+ +A++ SFGGLLM
Sbjct: 61 ASTLNLDGTPDSGYFVQGGRKSLADRYEYVMQGKLYKISEE--KKKRRAEILASFGGLLM 118
Query: 354 MLKGDPSIAARFELDQKLFILLRKV 280
ML+GD S+A++FELDQ+LFIL+RKV
Sbjct: 119 MLRGDLSVASKFELDQRLFILIRKV 143
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 218 bits (554), Expect = 2e-65
Identities = 108/146 (73%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
MVE LFEDIF V LDPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMRAG++F MVL
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 310
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 358
A TLNLDGTPD+G+YT RK+LADKFDYVM GKLY+ISE++ Q K ++Y SFGGLL
Sbjct: 311 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 370
Query: 357 MMLKGDPSIAARFELDQKLFILLRKV 280
MMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 371 MMLKGDPSSAASFELDQRLFLLIRKV 396
>ref|NP_001147399.1| uncharacterized protein LOC100281008 [Zea mays]
gi|670403896|ref|XP_008643585.1| PREDICTED: LOC100281008
isoform X1 [Zea mays] gi|670403898|ref|XP_008643586.1|
PREDICTED: LOC100281008 isoform X1 [Zea mays]
gi|194699730|gb|ACF83949.1| unknown [Zea mays]
gi|195607894|gb|ACG25777.1| DNA-directed RNA polymerases
I, II, and III 17.1 kDa polypeptide [Zea mays]
gi|195608506|gb|ACG26083.1| DNA-directed RNA polymerases
I, II, and III 17.1 kDa polypeptide [Zea mays]
gi|195611040|gb|ACG27350.1| DNA-directed RNA polymerases
I, II, and III 17.1 kDa polypeptide [Zea mays]
gi|195649823|gb|ACG44379.1| DNA-directed RNA polymerases
I, II, and III 17.1 kDa polypeptide [Zea mays]
gi|195653495|gb|ACG46215.1| DNA-directed RNA polymerases
I, II, and III 17.1 kDa polypeptide [Zea mays]
gi|238014148|gb|ACR38109.1| unknown [Zea mays]
gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 1 [Zea mays]
gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 2 [Zea mays]
gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 3 [Zea mays]
gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 4 [Zea mays]
Length = 146
Score = 209 bits (531), Expect = 3e-65
Identities = 102/146 (69%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
Frame = -2
Query: 714 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 535
M E LFED F V LDPDGKKFDRVSR+ ARSEQ DM M LD+ T++YPM AGEKF MV+
Sbjct: 1 MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60
Query: 534 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 358
A TLNLDGTPD+GYYT RK+LAD ++YVMQGKLY+ISE+T Q K +MY SFGGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120
Query: 357 MMLKGDPSIAARFELDQKLFILLRKV 280
M+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146