BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00005017
         (562 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975...   308   7e-95
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]   279   5e-92
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   286   7e-87
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   285   4e-86
ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   273   5e-85
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449...   263   2e-78
gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposo...   240   1e-76
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               257   3e-76
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   244   4e-73
gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposo...   229   2e-72
emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]         232   2e-71
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-...   236   5e-71
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc...   234   7e-71
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc...   236   1e-70
gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-...   231   2e-70
gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subc...   231   3e-70
emb|CAN76535.1| hypothetical protein VITISV_034845 [Vitis vinifera]   231   3e-70
gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group...   229   5e-70
gb|AAS01944.1| putative retrotransposon protein [Oryza sativa Ja...   233   7e-70
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   238   1e-69

>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe
           guttata]
          Length = 1203

 Score =  308 bits (788), Expect = 7e-95
 Identities = 142/185 (76%), Positives = 163/185 (88%)
 Frame = +3

Query: 6   SQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTRP 185
           +QSHY+E +LR+F  F +PPA  P+DL +HLAKN GE V QL+Y+++IGSLMY+ NCTRP
Sbjct: 316 TQSHYIEKVLRKFKMFDSPPATIPIDLKIHLAKNCGEPVDQLKYSQIIGSLMYVMNCTRP 375

Query: 186 DIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISDT 365
           DIA+SVSKLSRFTSNP  DHW A+TRVLRYLKYT++ G+ YTRYP+VLEGY DANWISDT
Sbjct: 376 DIAHSVSKLSRFTSNPRNDHWNALTRVLRYLKYTLDLGLHYTRYPSVLEGYSDANWISDT 435

Query: 366 KDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPCW 545
           KD KSTSG+VFTIGG AVSWKS+KQTCIARST+ESEFIALDK G EAEW RNFLEDIPCW
Sbjct: 436 KDYKSTSGYVFTIGGAAVSWKSTKQTCIARSTMESEFIALDKIGAEAEWPRNFLEDIPCW 495

Query: 546 NKPVP 560
           NKPVP
Sbjct: 496 NKPVP 500


>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
          Length = 313

 Score =  279 bits (714), Expect = 5e-92
 Identities = 132/186 (70%), Positives = 160/186 (86%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           LSQSHYV+ IL +F+  ++  A+TPVD++L L+KN+ E VSQ+EY+RVIGSLMYL +CTR
Sbjct: 47  LSQSHYVDKILGKFDKDNSGVARTPVDVTLXLSKNKXESVSQVEYSRVIGSLMYLMSCTR 106

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDIAY+ SKLSR+TSNP   HW+ + RVL+YL++T +YG+ YTRYPAVLEGY DANWIS+
Sbjct: 107 PDIAYAXSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISN 166

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
            KDSKS SG+VFT+GG A SWKSSKQT IARST+ESEFIALDK GEEAEWLR+FLEDIP 
Sbjct: 167 VKDSKSHSGYVFTLGGAAXSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPR 226

Query: 543 WNKPVP 560
           W+KPVP
Sbjct: 227 WSKPVP 232


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  286 bits (733), Expect = 7e-87
 Identities = 134/186 (72%), Positives = 163/186 (87%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            LSQSHYV+ IL +F+  ++  A+TPVD++LHL+KN+GE VSQ+EY+R+IGSLMYL +CTR
Sbjct: 1011 LSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCTR 1070

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
            PDIAY+VSKLSR+TSNP   HW+ + RVL+YL++T +YG+ YTRYPAVLEGY DANWIS+
Sbjct: 1071 PDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISN 1130

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             KDSKS SG+VFT+GG AVSWKSSKQ  IARST+ESEFIALDK GEEAEWLR+FLEDIP 
Sbjct: 1131 VKDSKSHSGYVFTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHFLEDIPR 1190

Query: 543  WNKPVP 560
            W+KPVP
Sbjct: 1191 WSKPVP 1196


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  285 bits (728), Expect = 4e-86
 Identities = 133/186 (71%), Positives = 162/186 (87%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            LSQSHYV+ IL +F+  ++  A+TPVD++LHL+KN+GE VSQ+EY+R+IGSLMYL +CTR
Sbjct: 1050 LSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCTR 1109

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
            PDIAY+V KLSR+TSNP   HW+ + RVL+YL++T +Y + YTRYPAVLEGY DANWIS+
Sbjct: 1110 PDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVLEGYSDANWISN 1169

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             KDSKS SG+VFT+GG AVSWKSSKQT IARST+ESEFIALDK GEEAEWLR+FLEDIP 
Sbjct: 1170 VKDSKSHSGYVFTLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPR 1229

Query: 543  WNKPVP 560
            W+KPVP
Sbjct: 1230 WSKPVP 1235


>ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103426950 [Malus domestica]
          Length = 724

 Score =  273 bits (699), Expect = 5e-85
 Identities = 125/186 (67%), Positives = 155/186 (83%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L+QSHY+E+ LR++    +  A TP D +  L KN+G+ +SQ EY++VIGSLMY+ NCTR
Sbjct: 179 LTQSHYIEATLRKYGHLESKDAITPFDANSKLKKNKGDAISQREYSQVIGSLMYIMNCTR 238

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDIAYSVS+LSR+T NP  DHW+A+ RV+RYLK+TMNYG+ YTRYP VLEG+ DANWISD
Sbjct: 239 PDIAYSVSRLSRYTCNPGHDHWEALIRVMRYLKHTMNYGLHYTRYPPVLEGFTDANWISD 298

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
           + D+KSTSG+VFT+GG A+SWKSS QTCIA ST+ESEFIALD AG EAEWLR+FLED+P 
Sbjct: 299 STDTKSTSGYVFTLGGAAISWKSSXQTCIAXSTMESEFIALDMAGGEAEWLRDFLEDVPI 358

Query: 543 WNKPVP 560
           W KP+P
Sbjct: 359 WPKPLP 364


>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
          Length = 2699

 Score =  263 bits (673), Expect = 2e-78
 Identities = 123/185 (66%), Positives = 151/185 (81%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            L+QSHY E ILRRF  F   PA T  D    L KN+G+ +SQLEY++VIGSLMYL N TR
Sbjct: 2489 LTQSHYPEKILRRFGQFDCKPAATSFDAGCKLEKNKGDAISQLEYSQVIGSLMYLMNSTR 2548

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
            PD+AY+VS+LSR+TSNP+ +HW A+ +VLRYLK T++YG+ YT+YP ++EG+ DANWISD
Sbjct: 2549 PDLAYAVSRLSRYTSNPAQEHWDALVQVLRYLKNTLDYGLHYTKYPPIVEGFSDANWISD 2608

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
            T +SKSTSG+VFT+GG A+SWKSSKQ CIARST+E EFI LD AGEEAEWL+NF+EDIP 
Sbjct: 2609 TTESKSTSGYVFTLGGAAISWKSSKQKCIARSTMEFEFITLDLAGEEAEWLKNFVEDIPM 2668

Query: 543  WNKPV 557
            W K V
Sbjct: 2669 WPKLV 2673


>gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 304

 Score =  240 bits (612), Expect = 1e-76
 Identities = 111/186 (59%), Positives = 146/186 (78%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L+QSHY+E IL++FN F   P  TP D S+ L KN GE VS L+Y+++IGSL++L+N +R
Sbjct: 54  LTQSHYIEKILKKFNYFDVKPVSTPFDPSIKLKKNIGESVSPLKYSQIIGSLLHLSNFSR 113

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDIAY+V +L R+T NP   HW A+ R+ RYLK T+NYGI Y  YP V+EG+CDANWISD
Sbjct: 114 PDIAYAVGRLGRYTHNPDHSHWLALERLFRYLKGTVNYGIHYACYPVVIEGFCDANWISD 173

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
           + ++KSTSG+VFT+ GGAV+WKS+KQT I+RST+E+E IALD A  EAE+L+N L D+P 
Sbjct: 174 SDETKSTSGYVFTLAGGAVAWKSAKQTIISRSTMEAEIIALDTASSEAEFLKNLLYDLPL 233

Query: 543 WNKPVP 560
            NKP+P
Sbjct: 234 LNKPIP 239


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  257 bits (656), Expect = 3e-76
 Identities = 122/185 (65%), Positives = 149/185 (80%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            LSQSHY+E IL +F   +    K P+DLS    KN GE  SQLEYARV+GSLMY+ NCTR
Sbjct: 996  LSQSHYIEKILDKFKYLNFNVVKIPIDLSCTFQKNVGESDSQLEYARVLGSLMYIMNCTR 1055

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
            PDI+ ++SKLSRFTSNP+  HW A+  VL YLK++ +Y + Y +YPA++EGY DANWI+ 
Sbjct: 1056 PDISCAISKLSRFTSNPNQTHWMAMKHVLGYLKHSQHYALHYNKYPAMIEGYSDANWITG 1115

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
            + + KSTSG+VFT+G GAVSWKSSKQTCIARST+ES+FIALDKAG+EAEWL+NFLEDIP 
Sbjct: 1116 SNEVKSTSGYVFTLGRGAVSWKSSKQTCIARSTMESKFIALDKAGKEAEWLQNFLEDIPF 1175

Query: 543  WNKPV 557
            W KPV
Sbjct: 1176 WPKPV 1180


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  244 bits (623), Expect = 4e-73
 Identities = 115/166 (69%), Positives = 137/166 (82%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            LSQ HY+E IL+RFN + + P KTPVDL+LH  KN G  + QLEY+R+IGSLMY+ NC  
Sbjct: 674  LSQCHYIEKILKRFNQYDDSPIKTPVDLNLHSTKNNGPAIDQLEYSRIIGSLMYVMNCMC 733

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
             DIAY+V+KLSRFT+N   DHWK + RVLRYL+YT+NYG+ Y RYP +LEGY DANWI D
Sbjct: 734  LDIAYAVNKLSRFTNNMGKDHWKVLVRVLRYLRYTLNYGLHYLRYPTLLEGYSDANWIFD 793

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGE 500
             KDSKSTSG++FTIGG A+S KSSKQTCIARST+ESEFIALDKAG+
Sbjct: 794  MKDSKSTSGYIFTIGGVAISRKSSKQTCIARSTMESEFIALDKAGK 839


>gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 322

 Score =  229 bits (585), Expect = 2e-72
 Identities = 105/186 (56%), Positives = 148/186 (79%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           LSQ HYVE  L++F+ +      TP D++  L +N+GE ++Q +YA++IGSL++L N +R
Sbjct: 47  LSQGHYVERFLKKFDYYDCKSVTTPYDVNSPLKQNKGESLAQSQYAQIIGSLLHLMNFSR 106

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDIAY+VS+LSR+T  P+ DHW+A+ R++RYL+ TM+YGI Y+ +PAVLEGY DANWIS+
Sbjct: 107 PDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISN 166

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
           + ++KSTSG+VFT+GGGA++W+S +Q+ IARST+ESEF+AL+    EAEWLRNFL +IP 
Sbjct: 167 SDETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANIPL 226

Query: 543 WNKPVP 560
             KP P
Sbjct: 227 GMKPTP 232


>emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]
          Length = 478

 Score =  232 bits (591), Expect = 2e-71
 Identities = 112/186 (60%), Positives = 140/186 (75%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L QSHYVE IL RF    + P+ TP D SL L KN+    +QLEY+++IGSLMYL + TR
Sbjct: 224 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLLKNKRIAKNQLEYSQIIGSLMYLASTTR 283

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDI+++VSKLSRFTSNP  DHW+A+ RV+RYLK TM  G+ YT YPA+LE Y D+NWISD
Sbjct: 284 PDISFAVSKLSRFTSNPRDDHWRALERVMRYLKRTMELGLHYTGYPAILEEYSDSNWISD 343

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             + K+TSG+VFT+GGGAVSW+S KQT + RST+E+E   LD +  EAEWLR+ L D+P 
Sbjct: 344 VDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTGLDTSTVEAEWLRDLLMDLPI 403

Query: 543 WNKPVP 560
             KPVP
Sbjct: 404 VEKPVP 409


>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 713

 Score =  236 bits (603), Expect = 5e-71
 Identities = 115/186 (61%), Positives = 142/186 (76%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L QSHYVE IL RF    + P+ TP D SL L KN+    +QLEY+++IGSLMYL + TR
Sbjct: 430 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 489

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDI+++VSKLSRFTSNP  DHW+A+ RV+RYLK T+  G+ YT YPAVLEGY D+NWISD
Sbjct: 490 PDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISD 549

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             + K+TSG+VFT+GGGAVSW+S KQT + RST+E+E  ALD A  EAEWLR+ L D+P 
Sbjct: 550 VDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPV 609

Query: 543 WNKPVP 560
             KPVP
Sbjct: 610 VEKPVP 615


>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 622

 Score =  234 bits (597), Expect = 7e-71
 Identities = 114/186 (61%), Positives = 141/186 (75%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L QSHYVE IL RF    + P+ TP D SL L KN+    +QLEY+++IGSLMYL + TR
Sbjct: 332 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 391

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDI+++VSKLSRFTSNP  DHW+A+ RV+RYLK T+  G+ YT YPAVLEGY D+NWISD
Sbjct: 392 PDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISD 451

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             + K+TSG+VFT+GGGAVSW+S KQT + RS +E+E  ALD A  EAEWLR+ L D+P 
Sbjct: 452 VDEIKATSGYVFTLGGGAVSWRSCKQTILTRSIMEAELTALDTATVEAEWLRDLLMDLPV 511

Query: 543 WNKPVP 560
             KPVP
Sbjct: 512 VEKPVP 517


>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 764

 Score =  236 bits (603), Expect = 1e-70
 Identities = 115/186 (61%), Positives = 142/186 (76%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            L QSHYVE IL RF    + P+ TP D SL L KN+    +QLEY+++IGSLMYL + TR
Sbjct: 461  LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 520

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
            PDI+++VSKLSRFTSNP  DHW+A+ RV+RYLK T+  G+ YT YPAVLEGY D+NWISD
Sbjct: 521  PDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISD 580

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
              + K+TSG+VFT+GGGAVSW+S KQT + RST+E+E  ALD A  EAEWLR+ L D+P 
Sbjct: 581  VDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPV 640

Query: 543  WNKPVP 560
              KPVP
Sbjct: 641  VEKPVP 646


>gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 570

 Score =  231 bits (590), Expect = 2e-70
 Identities = 113/186 (60%), Positives = 140/186 (75%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L QSHYVE IL RF    + P+ TP D SL L KN+  + +QLEY+++IGSLMYL + TR
Sbjct: 372 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIGSLMYLASATR 431

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDI+++VSKLSRFTSNP  DHW A+ RV+RYLK TM  G+ Y+ YPAVLEGY D+NWISD
Sbjct: 432 PDISFAVSKLSRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLEGYSDSNWISD 491

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             + K+TSG+VFT+GGG VSW+S KQT + RST+E+E  ALD A  EAEWLR+ L D+  
Sbjct: 492 VDEIKATSGYVFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLLI 551

Query: 543 WNKPVP 560
             KPVP
Sbjct: 552 VEKPVP 557


>gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 572

 Score =  231 bits (590), Expect = 3e-70
 Identities = 113/186 (60%), Positives = 140/186 (75%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L QSHYVE IL RF    + P+ TP D SL L KN+  + +QLEY+++IGSLMYL + TR
Sbjct: 374 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIGSLMYLASATR 433

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDI+++VSKLSRFTSNP  DHW A+ RV+RYLK TM  G+ Y+ YPAVLEGY D+NWISD
Sbjct: 434 PDISFAVSKLSRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLEGYSDSNWISD 493

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             + K+TSG+VFT+GGG VSW+S KQT + RST+E+E  ALD A  EAEWLR+ L D+  
Sbjct: 494 VDEIKATSGYVFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLLI 553

Query: 543 WNKPVP 560
             KPVP
Sbjct: 554 VEKPVP 559


>emb|CAN76535.1| hypothetical protein VITISV_034845 [Vitis vinifera]
          Length = 558

 Score =  231 bits (589), Expect = 3e-70
 Identities = 110/186 (59%), Positives = 134/186 (72%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           LSQ HYVE+ILR+F  F   P  T  D S  L KNR   V+Q+EYA +IGSLMYL NCTR
Sbjct: 339 LSQEHYVENILRKFEHFDCKPVSTLYDPSSQLKKNREHSVAQIEYAHIIGSLMYLMNCTR 398

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDI Y V +LSR+T NP+ DHW  V RVL+YL+ T++YG+ +  +P+VLEG+ DANWISD
Sbjct: 399 PDIIYVVGRLSRYTQNPNQDHWTVVRRVLKYLRGTIDYGLCFNGFPSVLEGFSDANWISD 458

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
           + + KS SG+VF   G AVSWKS+KQTCI RST+E E IAL+    EAEWLRN L DIP 
Sbjct: 459 SDEIKSISGYVFIFNGSAVSWKSTKQTCITRSTMEVELIALENVSFEAEWLRNLLVDIPL 518

Query: 543 WNKPVP 560
           W +  P
Sbjct: 519 WTRLAP 524


>gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|51038209|gb|AAT94012.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 493

 Score =  229 bits (583), Expect = 5e-70
 Identities = 112/185 (60%), Positives = 139/185 (75%)
 Frame = +3

Query: 3   LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
           L QSHYVE I  RF    + P+ TP D SL L KN+    +QLEY+++IGSLMYL + TR
Sbjct: 126 LLQSHYVEKIFNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 185

Query: 183 PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
           PDI+++VSKLS+FTSNP  DHW+AV RV+RYLK TM  G+ Y+ YPAVLEGY D+NWISD
Sbjct: 186 PDISFAVSKLSQFTSNPGDDHWRAVERVMRYLKGTMELGLHYSGYPAVLEGYSDSNWISD 245

Query: 363 TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
             + K+TSG+VFT+GGGAVSW+S KQT + RST+E+E  ALD A  EAEWL + L D+P 
Sbjct: 246 VDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLCDLLMDLPI 305

Query: 543 WNKPV 557
             KPV
Sbjct: 306 VEKPV 310


>gb|AAS01944.1| putative retrotransposon protein [Oryza sativa Japonica Group]
            gi|108709426|gb|ABF97221.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 710

 Score =  233 bits (595), Expect = 7e-70
 Identities = 115/186 (61%), Positives = 138/186 (74%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            L QSHYV+ +L RF      PA TP D S+ L KNR     QL Y+++IGSLMYL + TR
Sbjct: 517  LVQSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATR 576

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
            PDI+++VSKLSRF SNP  DHW+A+ RV+RYLK TM+YGI YT YP VLEGY D+NWISD
Sbjct: 577  PDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISD 636

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
              + K+TSG+VFT+GGGAVSWKS KQT + RST+E+E  ALD A  EAEWLR  L D+P 
Sbjct: 637  ADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEWLRELLMDLPV 696

Query: 543  WNKPVP 560
              KPVP
Sbjct: 697  VEKPVP 702


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  238 bits (607), Expect = 1e-69
 Identities = 116/186 (62%), Positives = 142/186 (76%)
 Frame = +3

Query: 3    LSQSHYVESILRRFNAFHNPPAKTPVDLSLHLAKNRGELVSQLEYARVIGSLMYLTNCTR 182
            L QSHYVE IL RF    + P+ TP D SL L KN+    +QLEY+++IGSLMYL + TR
Sbjct: 1037 LLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 1096

Query: 183  PDIAYSVSKLSRFTSNPSTDHWKAVTRVLRYLKYTMNYGILYTRYPAVLEGYCDANWISD 362
            PDI+++VSKLSRFTSNP  DHW+A+ RV+RYLK TM  G+ YT YPAVLEGY D+NWISD
Sbjct: 1097 PDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYTGYPAVLEGYSDSNWISD 1156

Query: 363  TKDSKSTSGFVFTIGGGAVSWKSSKQTCIARSTIESEFIALDKAGEEAEWLRNFLEDIPC 542
              + K+TSG+VFT+GGGAVSW+S KQT + RST+E+E  ALD A  EAEWLR+ L D+P 
Sbjct: 1157 VDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPV 1216

Query: 543  WNKPVP 560
              KPVP
Sbjct: 1217 VGKPVP 1222