BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00003340
         (9655 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]...  2647   0.0  
ref|YP_008815995.1| Ycf1 (chloroplast) [Lindenbergia philippensi...  2602   0.0  
ref|YP_009117280.1| hypothetical chloroplast RF19 (chloroplast) ...  2504   0.0  
ref|YP_009183651.1| hypothetical chloroplast RF19 (chloroplast) ...  2430   0.0  
ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata...  2407   0.0  
ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]...  2407   0.0  
ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana...  2405   0.0  
ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059...  2405   0.0  
ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]...  2404   0.0  
emb|CBR23797.1| Ycf1 protein (chloroplast) [Olea europaea subsp....  2400   0.0  
emb|CBR23889.1| Ycf1 protein (chloroplast) [Olea europaea subsp....  2400   0.0  
ref|YP_009110660.1| Ycf1 protein (chloroplast) [Hesperelaea palm...  2386   0.0  
ref|YP_009162320.1| photosystem I assembly protein Ycf1 (chlorop...  2367   0.0  
gb|AMQ33800.1| hypothetical chloroplast RF19 (chloroplast) [Stac...  2347   0.0  
gb|AMQ33624.1| hypothetical chloroplast RF19 (chloroplast) [Stac...  2343   0.0  
gb|AMQ32920.1| hypothetical chloroplast RF19 (chloroplast) [Sten...  2343   0.0  
gb|AMQ33448.1| hypothetical chloroplast RF19 (chloroplast) [Sten...  2342   0.0  
ref|YP_009239241.1| ycf1 (chloroplast) [Pedicularis ishidoyana] ...  2341   0.0  
gb|AMQ33096.1| hypothetical chloroplast RF19 (chloroplast) [Sten...  2338   0.0  
gb|AMQ33184.1| hypothetical chloroplast RF19 (chloroplast) [Hapl...  2336   0.0  

>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
            gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
            [Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
            protein (chloroplast) [Tectona grandis]
            gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
            [Tectona grandis]
          Length = 1898

 Score = 2647 bits (6861), Expect = 0.0
 Identities = 1366/1791 (76%), Positives = 1450/1791 (80%), Gaps = 6/1791 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 121  HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 180

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 181  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 240

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLFITCVYYLGRIPSP+F                  
Sbjct: 241  NKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPLFTKKLKETSKTEERVESEE 300

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFR 2531
                    ASEMKGTKQEQEG              KADPNKIDETEEIRVNGKE+EFHFR
Sbjct: 301  ERDVEIETASEMKGTKQEQEGSTEEDPSPSFFLEEKADPNKIDETEEIRVNGKENEFHFR 360

Query: 2532 FTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSKRW 2711
            FTETGYK RPVSEESYLMN+NE+ DNSRFK FD+KTEN +P     +K LV LLFDSKRW
Sbjct: 361  FTETGYKNRPVSEESYLMNINESRDNSRFKKFDEKTENKDPFFF--DKALVTLLFDSKRW 418

Query: 2712 NRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLPTL 2891
            NRP RYIKN + D AV+NEMSQYFF+ICQSDGKERISFTYPPSLSIF EMIKRRIS  TL
Sbjct: 419  NRPLRYIKNNQFDRAVRNEMSQYFFDICQSDGKERISFTYPPSLSIFLEMIKRRISPLTL 478

Query: 2892 EKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKKYL 3071
            +KF SNELYNPWV+TNKQKGKSFNNEFLNRI+ALDKE ISLNILETRTRL NDD  KKYL
Sbjct: 479  KKFLSNELYNPWVYTNKQKGKSFNNEFLNRIKALDKEDISLNILETRTRLCNDDSTKKYL 538

Query: 3072 SKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIE--KFGINRIHGILLSDTDYQKFEQK 3245
            SKRYDPFLN SYRK IYKNLSPS LKKTLIEN I+  KFGINRIHGILL D DYQ+FEQK
Sbjct: 539  SKRYDPFLNGSYRKTIYKNLSPSTLKKTLIENSIDMDKFGINRIHGILLPDADYQEFEQK 598

Query: 3246 KNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS-EGRIDYERRTKYLKYLLT 3422
            KNRFDKK +STEIVDF TFISK VRES +TN N KG SLFS E RID ++ T +  YLLT
Sbjct: 599  KNRFDKKPLSTEIVDFFTFISKFVRESGATNLNPKGFSLFSSEERIDSKKGTIHFNYLLT 658

Query: 3423 KIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAKR 3602
            KI+TDANGQ               +PRWSYKLITDLEQQSGEYQE+VPVDH+IRSRK KR
Sbjct: 659  KILTDANGQKISRKSIRIKEISKKIPRWSYKLITDLEQQSGEYQENVPVDHQIRSRKGKR 718

Query: 3603 VVIFXXXXXXXXXXXXXXXXXXXXX-IALIRYSQQSDFRRGLIKGSMRSQRRKTVILELF 3779
            VVIF                      +ALIRYSQQSDFRRG+IKGSMR+QRRK VILELF
Sbjct: 719  VVIFTANKENTDPNTTDTNMPDQIDEVALIRYSQQSDFRRGIIKGSMRAQRRKIVILELF 778

Query: 3780 QANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXXXXX 3959
            QANVHSPLFL+++QKS  FSFDISG IK  FRNW    E FKIVEYT+ QT         
Sbjct: 779  QANVHSPLFLERLQKSPFFSFDISGLIKLIFRNWGGGREAFKIVEYTKEQTKREEKKEKN 838

Query: 3960 XXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQLPEW 4139
                 ARIEIAEAWD+IP AQVIRGCMLLTQ I RKYILLPS IIAKNIGRI L QLPEW
Sbjct: 839  KRKEKARIEIAEAWDSIPFAQVIRGCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEW 898

Query: 4140 SEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSSXXX 4319
            SED QEWN+E+++KCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPW KSK+ SS   
Sbjct: 899  SEDLQEWNKEIHLKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWHKSKLRSSQKD 958

Query: 4320 XXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVLIIF 4499
                      FCFLTVWGMETELPFGSPRKRPSFFKPI  EF          YFRVL +F
Sbjct: 959  LMKKEKEKDDFCFLTVWGMETELPFGSPRKRPSFFKPILKEFEKKIGKWKKNYFRVLTVF 1018

Query: 4500 KRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXXXXX 4679
            K KTKLLRKVSKETKKW+IKSVI  KKIIKELSK+NPILLFRLREVEVY           
Sbjct: 1019 KGKTKLLRKVSKETKKWIIKSVIFIKKIIKELSKVNPILLFRLREVEVYESSKIKEEKDS 1078

Query: 4680 XXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTPRINNL 4859
               NQIIHESFSQ  SP+WTN SLTEKKMKDLTDRT+TI+NQIERI KEKKKVTP+INNL
Sbjct: 1079 IISNQIIHESFSQIASPSWTNSSLTEKKMKDLTDRTTTIQNQIERITKEKKKVTPKINNL 1138

Query: 4860 SPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMNTEFFL 5039
            SPNKTSYNAKRFEKWQILKRRNAR+ICKLP F KFFIE+IYTDIFLS+INIPR+NTE FL
Sbjct: 1139 SPNKTSYNAKRFEKWQILKRRNARLICKLPPFFKFFIEKIYTDIFLSIINIPRINTELFL 1198

Query: 5040 ESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFYDLSYV 5219
            E TKKI+DKSIYNNERKQ+               STIKK LDNISN K NSH FYDLSYV
Sbjct: 1199 ELTKKIIDKSIYNNERKQE--RINKKKKTPIPFISTIKKPLDNISNIK-NSHIFYDLSYV 1255

Query: 5220 SQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKKLPNYE 5399
            SQAYVFYKLSQIQVS+S  LRSV++YQ IPFFLKP+IKDSFETQG+V  KL DKK P+YE
Sbjct: 1256 SQAYVFYKLSQIQVSSS--LRSVVQYQRIPFFLKPKIKDSFETQGIVHLKLADKKHPSYE 1313

Query: 5400 MNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQLIDSKK 5579
            MNQWKNWLRG YQY LSQIRWSR +PEKWRN VH+  IAKK+NLSK  SYEKDQLIDSKK
Sbjct: 1314 MNQWKNWLRGRYQYHLSQIRWSRLIPEKWRNTVHQHRIAKKKNLSKRPSYEKDQLIDSKK 1373

Query: 5580 QFEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISYNTPKETF 5759
            QFEV  LSNQK+NF KYYRYDLLSYKF+NYE KTECFFYRSPFQGNKNQEISYNTPKET 
Sbjct: 1374 QFEVYSLSNQKDNFLKYYRYDLLSYKFLNYENKTECFFYRSPFQGNKNQEISYNTPKETL 1433

Query: 5760 FSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDTNRNQNTE 5939
            F MLR+IPI N L  V+ILYMEK  DRKYFDWKI NF LRQKVDIE WI+I+TNRNQNT+
Sbjct: 1434 FDMLRNIPIKNDLGNVNILYMEKPPDRKYFDWKIFNFYLRQKVDIETWIIINTNRNQNTQ 1493

Query: 5940 IRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWFFPEFVLL 6119
            IRTNNSQ  SKKDLFYL IPEIN PNSHKGFFDW+GMNEKM K PISNLE WFFPEFVLL
Sbjct: 1494 IRTNNSQIISKKDLFYLMIPEINPPNSHKGFFDWMGMNEKMPKHPISNLELWFFPEFVLL 1553

Query: 6120 YNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQEEKEPTS 6299
            Y AYKTKPWFIP                           GSFL+ SNKKH+NQEEKEPTS
Sbjct: 1554 YRAYKTKPWFIP------SKLLLLNLNSSENKKINEKEKGSFLVVSNKKHQNQEEKEPTS 1607

Query: 6300 RGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLRWDDTLNQ 6479
            RGD  SVLSQQKDIEE+  RS              TEAELDFFLKRYLLFQLRWD+TLNQ
Sbjct: 1608 RGDRRSVLSQQKDIEENYTRSDMQKGKKKKQYKSNTEAELDFFLKRYLLFQLRWDETLNQ 1667

Query: 6480 RMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVLIIEPIRL 6659
            RMINNIKVYCLLLRL+DPRKITISS+QKREMSLDIMLIQKNLTL+ELMKKGVLI+EPIRL
Sbjct: 1668 RMINNIKVYCLLLRLIDPRKITISSIQKREMSLDIMLIQKNLTLSELMKKGVLILEPIRL 1727

Query: 6660 FGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTGNRNKNRF 6839
             GKKDGQFIMYQTIGISLVHKSKHQTNQKYQE+RYVSKNN DE IS +QR+TGNR++N F
Sbjct: 1728 SGKKDGQFIMYQTIGISLVHKSKHQTNQKYQERRYVSKNNFDETISSHQRITGNRDQNHF 1787

Query: 6840 DLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDNNHLDREE 7019
            DLLVPENILSFR RRK RILICFNSKNRN IDRN VF N KNVKNSS+VSHDNN LDRE+
Sbjct: 1788 DLLVPENILSFRRRRKLRILICFNSKNRNYIDRNPVFWNGKNVKNSSQVSHDNNSLDREK 1847

Query: 7020 N--QLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKIC 7166
            N  QLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKIC
Sbjct: 1848 NQLQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKIC 1898



 Score =  181 bits (460), Expect = 9e-42
 Identities = 93/112 (83%), Positives = 99/112 (88%), Gaps = 3/112 (2%)
 Frame = +2

Query: 1499 IWKVQKSSYNNPEIAIEKK*---GRFVMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLT 1669
            IWKVQKSSYNNPEIAIEKK    GRFVMIFQSFLLGNLVSLCMKIINSVV VGLYYGFLT
Sbjct: 14   IWKVQKSSYNNPEIAIEKKKEKKGRFVMIFQSFLLGNLVSLCMKIINSVVAVGLYYGFLT 73

Query: 1670 TFSIGPSYVFLRLVRVMEEGTEKKVSAISGFITGQFMMFVSIYYVPLASSIG 1825
            TFSIGPSY+FL   +VMEEGTEKKVSA +GFITGQ MMF+SIYY PL  ++G
Sbjct: 74   TFSIGPSYLFLLRAQVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALG 125


>ref|YP_008815995.1| Ycf1 (chloroplast) [Lindenbergia philippensis]
            gi|557136922|emb|CDI43976.1| Ycf1 (chloroplast)
            [Lindenbergia philippensis]
          Length = 1871

 Score = 2602 bits (6743), Expect = 0.0
 Identities = 1331/1796 (74%), Positives = 1435/1796 (79%), Gaps = 10/1796 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 82   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 141

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQN+SIRS
Sbjct: 142  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNNSIRS 201

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPIF                  
Sbjct: 202  NKYIRSNKYLVAELRNSMARIFSILLFLTCVYYLGRIPSPIFTKKLKETPKTEQRVESEE 261

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFR 2531
                    AS+MKGTKQEQEG              KA+PNKIDETEEIRVNGKEDEFHFR
Sbjct: 262  ERDLEIETASKMKGTKQEQEGSTEEDPSPSFFSEEKANPNKIDETEEIRVNGKEDEFHFR 321

Query: 2532 FTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSKRW 2711
            FTETGYKKRPVSEESYLMN+NEN++NSRFKIF+KKT+N +P     EKPLVNLLFDSKRW
Sbjct: 322  FTETGYKKRPVSEESYLMNINENHENSRFKIFEKKTKNKDPFFFFFEKPLVNLLFDSKRW 381

Query: 2712 NRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLPTL 2891
            NRP RYIKNT  DG V+NEMSQYFF+IC+SDGKERISFTY PSLSIFFEMIKRRIS  TL
Sbjct: 382  NRPLRYIKNTHFDGTVRNEMSQYFFDICKSDGKERISFTYLPSLSIFFEMIKRRISPTTL 441

Query: 2892 EKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKKYL 3071
            EK + N+L N WV+TN QKGKSFNNEF+NRIEALDKE  SLN+LETR RL NDDY K+YL
Sbjct: 442  EKSSPNKLSNLWVYTNTQKGKSFNNEFINRIEALDKEFSSLNMLETRIRLCNDDYTKEYL 501

Query: 3072 SKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQKKN 3251
            SKRYDPFLNRSYRK IYKN SP ILKKTL+ENFIE FGINRIHGILLSDTD Q+ EQK N
Sbjct: 502  SKRYDPFLNRSYRKTIYKNFSPPILKKTLVENFIENFGINRIHGILLSDTDCQELEQKIN 561

Query: 3252 RFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYLLTKIV 3431
            RFDKK +STEIVDFLTFIS+VVR+S S + NWK L LFSE RI+    TK+LKYLLT+IV
Sbjct: 562  RFDKKPLSTEIVDFLTFISRVVRKSESIDLNWKVLFLFSEERIE----TKFLKYLLTQIV 617

Query: 3432 TDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAKRVVI 3611
            T  N Q               VPRWSYKL+TDLEQQSGEY EDVPVDH+IRSRK KRVVI
Sbjct: 618  TGTNDQKIIRKSTKIKEISKKVPRWSYKLMTDLEQQSGEYHEDVPVDHQIRSRKGKRVVI 677

Query: 3612 FXXXXXXXXXXXXXXXXXXXXX--IALIRYSQQSDFRRGLIKGSMRSQRRKTVILELFQA 3785
            F                       +ALIRYSQQSDFRRG+IKGSMRSQRRK VILELFQA
Sbjct: 678  FTANKENTDSNTDTNTLDQTDTDEVALIRYSQQSDFRRGIIKGSMRSQRRKIVILELFQA 737

Query: 3786 NVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXXXXXXX 3965
            NVHS LFLD++QK   FSFDIS  IK   RNW  +G+ FKI+EYTE QT           
Sbjct: 738  NVHSALFLDRVQKPPFFSFDISRLIKLIVRNWAGKGKAFKILEYTEEQTKREEKKEKNKR 797

Query: 3966 XXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQLPEWSE 4145
               ARIEIAEAWDTIP AQVIRGCMLLTQ   RKYILLPS IIAKN+GRILLFQLPEWS 
Sbjct: 798  KENARIEIAEAWDTIPFAQVIRGCMLLTQSTFRKYILLPSFIIAKNVGRILLFQLPEWSV 857

Query: 4146 DFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSSXXXXX 4325
            D Q+W+RE++VKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPW+KSK+GSS     
Sbjct: 858  DLQKWDREIHVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWNKSKLGSSRKNLM 917

Query: 4326 XXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVLIIFKR 4505
                    FCFLTVWGMETE PFGSPRKR SFFKPIF EF          Y RVL++FKR
Sbjct: 918  KKKKEKDDFCFLTVWGMETEFPFGSPRKRLSFFKPIFTEFEKKIGKFKKKYSRVLLVFKR 977

Query: 4506 KTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXXXXXXX 4685
            K KLLRK+SKETK+W+IK  +L KK  KELSK+NPILLF+LREVE+Y             
Sbjct: 978  KKKLLRKLSKETKRWIIKITLLIKKKRKELSKVNPILLFQLREVEIYESREFKEEKDSLR 1037

Query: 4686 XNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTPRINNLSP 4865
             NQIIHESFS   SP+WTN S TEKK+KDL DRTSTI NQIE I K+KKKVTPRINNLSP
Sbjct: 1038 SNQIIHESFSHIASPSWTNSSFTEKKLKDLADRTSTILNQIEIISKDKKKVTPRINNLSP 1097

Query: 4866 NKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMNTEFFLES 5045
            NKT+YNAKRFEKWQILKR NARIICKLP FLKFFIERIYTD+FLS+INI +MNTE FLES
Sbjct: 1098 NKTNYNAKRFEKWQILKRINARIICKLPLFLKFFIERIYTDLFLSIINIAKMNTELFLES 1157

Query: 5046 TKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFYDLSYVSQ 5225
             KKI+DKSI NNERKQ+               ST KKSLDNI NSKTNSHTFYDLSYVSQ
Sbjct: 1158 IKKIIDKSISNNERKQE--IINKKKKNPIPFISTRKKSLDNIRNSKTNSHTFYDLSYVSQ 1215

Query: 5226 AYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKKLPNYEMN 5405
            AYVFYKLSQIQVSNSYKLRSVL YQEIPFFLKPEIK+S ET+ +V SKLGDKKLP YEMN
Sbjct: 1216 AYVFYKLSQIQVSNSYKLRSVLHYQEIPFFLKPEIKNSLETRKVVHSKLGDKKLPIYEMN 1275

Query: 5406 QWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQLIDSKKQF 5585
            QWKNWL+GHYQY+LSQIRWSR +PEKWRN VH+RHIAK+ENL K HSYEKDQL+DS K+ 
Sbjct: 1276 QWKNWLKGHYQYNLSQIRWSRLIPEKWRNTVHQRHIAKRENLGKCHSYEKDQLMDSPKKL 1335

Query: 5586 EVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISYNTPKETFFS 5765
            EV  +SNQKENF+K YRYDLLS KF+NYE K ECFFYRSPFQGNKNQEI YNT KETFF 
Sbjct: 1336 EVYSVSNQKENFKKDYRYDLLSSKFLNYENKAECFFYRSPFQGNKNQEICYNTSKETFFD 1395

Query: 5766 MLRSIPINNY------LEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDTNRN 5927
            MLR+ PI NY      L  VDILYM+K ADRKYFDWKI+NF LRQKVD EAWI IDTNRN
Sbjct: 1396 MLRNSPIKNYYYLNNNLGRVDILYMKKTADRKYFDWKIINFYLRQKVDSEAWITIDTNRN 1455

Query: 5928 QNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWFFPE 6107
            QNT+I TNNSQ  SKKDL YL IPE NLPNSHKGFFDW+GMNEKMLK PISNLE WF PE
Sbjct: 1456 QNTQILTNNSQIISKKDLSYLMIPEKNLPNSHKGFFDWMGMNEKMLKHPISNLELWFLPE 1515

Query: 6108 FVLLYNAYKTKPWFIP--XXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQE 6281
            FVLLYNAYKTKPWFIP                              SFLI S KK+RNQ+
Sbjct: 1516 FVLLYNAYKTKPWFIPSQLLLLNFLNLNKNEKNSSENKKINEKEKRSFLITSEKKYRNQK 1575

Query: 6282 EKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLRW 6461
            EKEPTSRGDLGSVLSQQKDIEE++ RS              TEAELDFFLKRY LFQLRW
Sbjct: 1576 EKEPTSRGDLGSVLSQQKDIEENDVRSNMKKGKKKKQYKNKTEAELDFFLKRYFLFQLRW 1635

Query: 6462 DDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVLI 6641
             DTLNQ+MINNIKVYCLLLRL+DPRK+TISS+ KREMSLDIMLIQKNLTLTELMK+GVLI
Sbjct: 1636 GDTLNQKMINNIKVYCLLLRLIDPRKMTISSILKREMSLDIMLIQKNLTLTELMKRGVLI 1695

Query: 6642 IEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTGN 6821
            IEPIRL GKKDGQFIMYQTIGISL+HKSK QTNQKYQEQRY SKN+ DEAIS  QR+  N
Sbjct: 1696 IEPIRLSGKKDGQFIMYQTIGISLIHKSKRQTNQKYQEQRYDSKNHFDEAISTQQRIIEN 1755

Query: 6822 RNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDNN 7001
            R+KNRF+L +PENILSFR RRK RILICFNSKNRN++DRN VF NEKN+KNS++VSHDN 
Sbjct: 1756 RDKNRFNLFIPENILSFRRRRKLRILICFNSKNRNNMDRNPVFWNEKNIKNSTQVSHDNK 1815

Query: 7002 HLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKICG 7169
            HL RE+NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLR++LYPRLKICG
Sbjct: 1816 HLGREKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRVYLYPRLKICG 1871



 Score =  144 bits (362), Expect = 2e-30
 Identities = 71/86 (82%), Positives = 78/86 (90%)
 Frame = +2

Query: 1568 VMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVS 1747
            +MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVS
Sbjct: 1    MMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVS 60

Query: 1748 AISGFITGQFMMFVSIYYVPLASSIG 1825
            A +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   ATTGFITGQLMMFISIYYAPLHLALG 86


>ref|YP_009117280.1| hypothetical chloroplast RF19 (chloroplast) [Premna microphylla]
            gi|748013964|gb|AJE28434.1| hypothetical chloroplast RF19
            (chloroplast) [Premna microphylla]
          Length = 1891

 Score = 2504 bits (6489), Expect = 0.0
 Identities = 1298/1816 (71%), Positives = 1407/1816 (77%), Gaps = 30/1816 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKRFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            N  IRSNKYLV ELRNSMARIFSILLFITCVYYLGRIPSP+F                  
Sbjct: 201  NVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPLFTKKLKETSKTEERVESEE 260

Query: 2352 XXXXXXXX---------------------ASEMKGTKQEQEGXXXXXXXXXXXXXXKADP 2468
                                         AS+MKGTKQEQEG              KADP
Sbjct: 261  ERDVEIETETSKTEERVESEEERDVEIETASKMKGTKQEQEGSTEEDPPPSFFSEEKADP 320

Query: 2469 NKIDETEEIRVNGKEDEFHFRFTETGYKKRPVSEESYLMNVNENYDNSRFK-IFDKKTEN 2645
            NKIDETEEIRV+G+E+EFHFRFTETGYK RPV EESYLMN+NEN DNSRFK  FD+KTEN
Sbjct: 321  NKIDETEEIRVDGRENEFHFRFTETGYKNRPVFEESYLMNINENQDNSRFKNYFDEKTEN 380

Query: 2646 NEPXXXXXEKPLVNLLFDSKRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISF 2825
             +      +KPLV LLFDSKRWNRPFRYIKN +   AV+ EMSQYFF ICQSDGKERISF
Sbjct: 381  KKDPLFF-DKPLVTLLFDSKRWNRPFRYIKNNQFGKAVRKEMSQYFFEICQSDGKERISF 439

Query: 2826 TYPPSLSIFFEMIKRRISLPTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKES 3005
            TYPPSLSIF EMIKRRI  P LE+F+ NELYNPWV+TN+QKGKSFNNEFLNRI+ALDKE 
Sbjct: 440  TYPPSLSIFLEMIKRRIPAPRLEEFSFNELYNPWVYTNRQKGKSFNNEFLNRIKALDKED 499

Query: 3006 ISLNILETRTRLYNDDYPKKYLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFG 3185
            ISLNI ETRTRL NDD PK+YLSK YDP LN SYRK IYKNLSPS LKK LIENFIEKFG
Sbjct: 500  ISLNIFETRTRLCNDDSPKEYLSKSYDPLLNGSYRKTIYKNLSPSTLKKLLIENFIEKFG 559

Query: 3186 INRIHGILLSDTDYQKFEQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLF 3365
            INRIHG+LL D DYQ+FEQK NRFDKK +ST IVDFLT ISK VRES STN N KGL + 
Sbjct: 560  INRIHGLLLPDADYQEFEQKINRFDKKPLSTGIVDFLTLISKFVRESGSTNLNPKGLFIV 619

Query: 3366 SEGRIDYERRTKYLKYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSG 3545
               +  +++R K   YLLTKIVTD NGQ               +PRWSYKLITDLEQQSG
Sbjct: 620  FRRKNRFQKRNKIFNYLLTKIVTDVNGQKISRKSIRIKEISKKIPRWSYKLITDLEQQSG 679

Query: 3546 EYQEDVPVDHEIRSRKAKRVVIFXXXXXXXXXXXXXXXXXXXXX-----IALIRYSQQSD 3710
            EYQEDVP+DH+IRSRK KRVVIF                          +ALIRYSQQSD
Sbjct: 680  EYQEDVPIDHQIRSRKGKRVVIFTANKENTDPNTDPNTTDTNMPDQIEEMALIRYSQQSD 739

Query: 3711 FRRGLIKGSMRSQRRKTVILELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWR 3890
            FRRG+IKGSMR+QRRK VILELFQANV+SPLFL+++QK  LFSFDISG IK  FRN + +
Sbjct: 740  FRRGIIKGSMRAQRRKIVILELFQANVYSPLFLERLQKPPLFSFDISGLIKLIFRNCVGK 799

Query: 3891 GEGFKIVEYTENQTXXXXXXXXXXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKY 4070
            G+ FKIVEYT+ QT              ARIEIAEAWD+IP AQVIRGCMLLTQ I RKY
Sbjct: 800  GKAFKIVEYTKEQTKREEERKEQKRKEKARIEIAEAWDSIPFAQVIRGCMLLTQSIFRKY 859

Query: 4071 ILLPSCIIAKNIGRILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQ 4250
            ILLPS IIAKNIGRI L QLPEWSED QEWNRE+++KCTYNGVPLSETEFPKNWLTDGIQ
Sbjct: 860  ILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLSETEFPKNWLTDGIQ 919

Query: 4251 IKILFPFCLKPWDKSKVGSSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKP 4430
            IKILFPFCLKPW KSK+ SS             FCFLTVWGMETELPFGSPRKRPSFFKP
Sbjct: 920  IKILFPFCLKPWHKSKLRSSQKNLMKKKKKKDDFCFLTVWGMETELPFGSPRKRPSFFKP 979

Query: 4431 IFNEFXXXXXXXXXXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINP 4610
            IF EF          YFRV  +FK KTKLL+KVSKETKKWVIKSV+  K+IIKELSK+NP
Sbjct: 980  IFKEFKKKIGKSKKKYFRVQTVFKGKTKLLQKVSKETKKWVIKSVLFIKRIIKELSKVNP 1039

Query: 4611 ILLFRLREVEVYXXXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTS 4790
            ILLF+LREVEVY              NQIIH+SFSQ  SP+WT  SLTEKK+KD+TDR S
Sbjct: 1040 ILLFKLREVEVYESSEIKEEKDPILSNQIIHKSFSQLASPSWTTSSLTEKKIKDMTDRIS 1099

Query: 4791 TIENQIERIKKEKKKVTPRINNLSPNKTSYNAKRFEKWQ--ILKRRNARIICKLPFFLKF 4964
            TI+NQIERI KEKKKVTPRINNLSPNKTSYNAK+FEK +   ++R NA++ICKLP F KF
Sbjct: 1100 TIQNQIERITKEKKKVTPRINNLSPNKTSYNAKKFEKGERGNVQRGNAQLICKLPPFFKF 1159

Query: 4965 FIERIYTDIFLSLINIPRMNTEFFLESTKKIL-DKSIYNNERKQDXXXXXXXXXXXXXXX 5141
            FIE+IYTDIFLS+INIPR+NTE FLE TK++L +      E K+                
Sbjct: 1160 FIEKIYTDIFLSIINIPRINTELFLELTKRLLINPFTIMKENKKKQERINKKKKTPIPFI 1219

Query: 5142 STIKKSLDNISNSKTNSHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLK 5321
             TIKKSL NISN K NSH FYDLSYVSQAYVFYKLSQIQVSNS  LRSV++Y+ IPFFLK
Sbjct: 1220 LTIKKSLGNISNIKANSHIFYDLSYVSQAYVFYKLSQIQVSNS--LRSVVQYRGIPFFLK 1277

Query: 5322 PEIKDSFETQGMVRSKLGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVH 5501
            P+IKDSFETQGM   KL DKKLP+YE+N WKNWLRG  QY   QI+WSR +PEKWRN VH
Sbjct: 1278 PKIKDSFETQGMFHLKLADKKLPSYEINHWKNWLRGQCQYHFLQIKWSRLIPEKWRNTVH 1337

Query: 5502 RRHIAKKENLSKWHSYEKDQLIDSKKQFEVDLLSNQKENFQKYYRYDLLSYKFINYETKT 5681
             R IAKKENLSKWHS EKDQLIDSKKQFEV  LSNQ++NF KYYRYDLLSYK INYE + 
Sbjct: 1338 PRRIAKKENLSKWHSDEKDQLIDSKKQFEVYSLSNQQDNFLKYYRYDLLSYKLINYENQM 1397

Query: 5682 ECFFYRSPFQGNKNQEISYNTPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKI 5861
            ECFFYRSP +GNKNQEISYNTPKET F M R+IPI N L  V ILYM+  ADRKYFDWKI
Sbjct: 1398 ECFFYRSPLRGNKNQEISYNTPKETLFDMPRNIPIKNDLGKVHILYMKNPADRKYFDWKI 1457

Query: 5862 LNFDLRQKVDIEAWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDW 6041
             NF LRQK DIEAWI+IDTNRNQNT+IR NNSQ  SKKDLFYL IPEINLPNSHKGFFDW
Sbjct: 1458 FNFYLRQKADIEAWIIIDTNRNQNTQIRINNSQIISKKDLFYLMIPEINLPNSHKGFFDW 1517

Query: 6042 IGMNEKMLKRPISNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXX 6221
            +GMNEKMLK PISNLE WFFPEFVLLY  YK KPWFIP                      
Sbjct: 1518 MGMNEKMLKHPISNLELWFFPEFVLLYKTYKMKPWFIP--SKLLLFNLNRSQNLNRSQNK 1575

Query: 6222 XXXXXGSFLIASNKKHRNQEEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXX 6401
                 GSFL+ASNKKHRNQEE+EPTSR D  S+LSQQKDI+E+ ARS             
Sbjct: 1576 KINERGSFLVASNKKHRNQEEREPTSRIDRRSLLSQQKDIDENYARSDMKRGKKKKQYKS 1635

Query: 6402 XTEAELDFFLKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLD 6581
              EAELDFFLK Y LFQLRWD+TLNQRMINNIKVYCLLLRL+DPRKITISS++KREMSLD
Sbjct: 1636 NAEAELDFFLKCYFLFQLRWDETLNQRMINNIKVYCLLLRLIDPRKITISSIEKREMSLD 1695

Query: 6582 IMLIQKNLTLTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQR 6761
            IMLIQKNLTL+ELMKKGVLI+EPIRL GKK+GQFIMYQTIGISLVHKSKHQTNQK QEQR
Sbjct: 1696 IMLIQKNLTLSELMKKGVLILEPIRLSGKKNGQFIMYQTIGISLVHKSKHQTNQKCQEQR 1755

Query: 6762 YVSKNNLDEAISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRN 6941
            YVSKNNLDE I P QR+T N +KN FDLLVPENILSFR RRK RILICFNSKN+N  D+N
Sbjct: 1756 YVSKNNLDETILPQQRITQNSDKNHFDLLVPENILSFRRRRKLRILICFNSKNQNYRDQN 1815

Query: 6942 LVFLNEKNVKNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSR 7121
             +F N K+VKNSS+VSHDNNHLDRE+NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSR
Sbjct: 1816 PLFWNGKSVKNSSQVSHDNNHLDREKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSR 1875

Query: 7122 FSMLRIHLYPRLKICG 7169
            F MLRI +YPRL+I G
Sbjct: 1876 FGMLRIQMYPRLQIRG 1891



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_009183651.1| hypothetical chloroplast RF19 (chloroplast) [Scutellaria insignis]
            gi|949600210|gb|ALN11661.1| hypothetical chloroplast RF19
            (chloroplast) [Scutellaria insignis]
          Length = 1842

 Score = 2430 bits (6297), Expect = 0.0
 Identities = 1274/1789 (71%), Positives = 1386/1789 (77%), Gaps = 4/1789 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            D GSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDSGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQN SIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNRSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV EL NS ARIFSILLF+TCVYYLGRIPSP+F                  
Sbjct: 201  NKYIRSNKYLVSELINSTARIFSILLFVTCVYYLGRIPSPLFTKKKKETSKTEERVEIET 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFR 2531
                    AS+MK TK+E EG              +ADPNKIDETEEIRVNGKE+EFHF 
Sbjct: 261  --------ASKMKATKEEHEGYTEEDLSISFFSEERADPNKIDETEEIRVNGKENEFHF- 311

Query: 2532 FTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSKRW 2711
             TETGY+ RPVSEESYLMN NEN DNSRFKIFDKKT+N +      EKPLV +LFDSKRW
Sbjct: 312  -TETGYQNRPVSEESYLMNTNENQDNSRFKIFDKKTKNKD--FVFFEKPLVTILFDSKRW 368

Query: 2712 NRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLPTL 2891
            NRPFRYIKN   D AV+ EMSQYFF+ICQSDGKERI FTYPPSLSIF E IKRRISL   
Sbjct: 369  NRPFRYIKNNNFDKAVRTEMSQYFFDICQSDGKERICFTYPPSLSIFLETIKRRISL--- 425

Query: 2892 EKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKKYL 3071
            E ++ NE Y+PWV+TNKQKGKSFNNEF+NRI+ALDKE   LNI ETRTRL N D  K+YL
Sbjct: 426  ENYSFNEPYSPWVYTNKQKGKSFNNEFINRIKALDKEDTYLNIFETRTRLCNADSTKEYL 485

Query: 3072 SKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQKKN 3251
            SKRYDPFLN SYRK IYK  S   L K LIENF+  FGINRIHGIL+ D  YQ+FEQK+N
Sbjct: 486  SKRYDPFLNGSYRKTIYKKPS---LSKFLIENFLNPFGINRIHGILIGDAAYQEFEQKRN 542

Query: 3252 RFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYLLT--K 3425
            RFDKK +STEIV F TFISK VRES S+N N KG SLFSEGRID ++ TK+L YLL   K
Sbjct: 543  RFDKKPLSTEIVSFFTFISKFVRESGSSNLNPKGPSLFSEGRIDSDKGTKFLNYLLNLNK 602

Query: 3426 IVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAKRV 3605
            IVTDANGQ               +PR SYKLITDLEQQS +YQEDVP++H+IRSRK KRV
Sbjct: 603  IVTDANGQKMSRKSIRIKEISKKIPRRSYKLITDLEQQSRDYQEDVPLEHQIRSRKGKRV 662

Query: 3606 VIFXXXXXXXXXXXXXXXXXXXXX-IALIRYSQQSDFRRGLIKGSMRSQRRKTVILELFQ 3782
            VI                       +ALIRYSQQSDFRRG+IKGSMR+QRRK V+ ELFQ
Sbjct: 663  VILTGNKENTDPNTTDTNMPDQINEVALIRYSQQSDFRRGIIKGSMRAQRRKVVVFELFQ 722

Query: 3783 ANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXXXXXX 3962
            ANVHSPLF +++QKS LFSFDIS FI +   NW+ +GE  KIVE T+ QT          
Sbjct: 723  ANVHSPLFGERLQKSPLFSFDISRFINQILINWVGKGEALKIVECTKEQTKREEKKEKNK 782

Query: 3963 XXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQLPEWS 4142
                 RI+IAEAWD+IP AQVIRGCMLLTQ I RKYILLPS IIAKNIGRI L QLPEWS
Sbjct: 783  RKEKERIKIAEAWDSIPFAQVIRGCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWS 842

Query: 4143 EDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSSXXXX 4322
            ED QEWNRE+++KCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPW KSK+ SS    
Sbjct: 843  EDLQEWNREIHLKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWHKSKLRSSQKDL 902

Query: 4323 XXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVLIIFK 4502
                     FCFLTVWGMETELPF SPR R SFFKPI  EF          Y RVL +FK
Sbjct: 903  MKNKKEKDDFCFLTVWGMETELPFCSPRNRLSFFKPILKEFEKKMGNCKKKYLRVLTVFK 962

Query: 4503 RKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXXXXXX 4682
             K KLLRKVSKETKKWVIKS+I  KKI+K+LSK+NPIL FRLREV VY            
Sbjct: 963  GKLKLLRKVSKETKKWVIKSIIFIKKILKKLSKVNPILFFRLREVGVYASTEIKEEKDSI 1022

Query: 4683 XXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTPRINNLS 4862
              NQIIHESFSQ  SP+WTN+SLTEKKMKDLTDRTSTI NQIERI KEKKKVTPRINNLS
Sbjct: 1023 RSNQIIHESFSQITSPSWTNYSLTEKKMKDLTDRTSTIRNQIERITKEKKKVTPRINNLS 1082

Query: 4863 PNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMNTEFFLE 5042
            P  TSYNAKRFEK QILK RNAR+I KL    K FIE+IYT +FLS+INIPR+NTE FL+
Sbjct: 1083 P--TSYNAKRFEKRQILKIRNARLIYKLLPLFKIFIEKIYTALFLSIINIPRINTELFLK 1140

Query: 5043 STKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFYDLSYVS 5222
             TKKI+DKSIYNNERK++               STIKK LDNISN K NSH FYDLSY+ 
Sbjct: 1141 LTKKIIDKSIYNNERKEE--KINKKKKPPIPFISTIKKPLDNISNIKRNSHIFYDLSYMP 1198

Query: 5223 QAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKKLPNYEM 5402
            QAYVFYKLSQIQVSNS  LR V++YQ IP FLKP+IKDS ET+GM  SKL DKK+P+YEM
Sbjct: 1199 QAYVFYKLSQIQVSNS--LRPVVQYQGIPPFLKPKIKDSCETRGMFHSKLSDKKIPSYEM 1256

Query: 5403 NQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQLIDSKKQ 5582
            N WK WLRGHYQY LSQIRWSR +PEKWRN V++R IAKKENLSK HS EKD L++ KKQ
Sbjct: 1257 NPWKTWLRGHYQYHLSQIRWSRLIPEKWRNTVYQRRIAKKENLSKRHSSEKDSLMNYKKQ 1316

Query: 5583 FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISYNTPKETFF 5762
            FEV  LSNQK+NF KYYRYDLLSYKF+NYE K ECFF RSP  GNKN+EISYNT KET F
Sbjct: 1317 FEVYSLSNQKDNFLKYYRYDLLSYKFLNYENKAECFFSRSPLHGNKNKEISYNTSKETLF 1376

Query: 5763 SMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDTNRNQNTEI 5942
             MLR+IPI N L  VDI+YMEK +D KYFD KI  F +RQK+ IEA I+IDTNRNQNT+I
Sbjct: 1377 DMLRNIPIKNDLGKVDIIYMEKPSDIKYFDRKIFYFFIRQKIGIEASIIIDTNRNQNTQI 1436

Query: 5943 RTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWFFPEFVLLY 6122
            RTNNSQ  SKKDLFYL IPEINL NSHKGFFDW+GMNEKMLKRP SNLE WFFPEFVLLY
Sbjct: 1437 RTNNSQIISKKDLFYLMIPEINLANSHKGFFDWMGMNEKMLKRPRSNLELWFFPEFVLLY 1496

Query: 6123 NAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQEEKEPTSR 6302
              YK KPWFIP                           GSFLIASNKK+RN+EEKE TS+
Sbjct: 1497 KTYKLKPWFIP---SKLLLLNLDISETKETKKINEKEKGSFLIASNKKYRNKEEKELTSQ 1553

Query: 6303 GDLGSVLSQQKDIEESNA-RSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLRWDDTLNQ 6479
             D  SVLS+QKDIE + A RS              TEAELDFFLKR+LLFQLRWD+TL Q
Sbjct: 1554 VDRRSVLSEQKDIEANYATRSDMKKGKKKKQYKSNTEAELDFFLKRFLLFQLRWDETLTQ 1613

Query: 6480 RMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVLIIEPIRL 6659
            R+INNIKVYCLLLRL+DPRKITISS+QKREM+LDIMLIQKNLTL+ELMKKGVLI+EPIRL
Sbjct: 1614 RLINNIKVYCLLLRLIDPRKITISSIQKREMNLDIMLIQKNLTLSELMKKGVLILEPIRL 1673

Query: 6660 FGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTGNRNKNRF 6839
             GKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQ YV+ NN DE ISP+Q++TGNRNKN F
Sbjct: 1674 SGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQGYVANNNFDETISPHQKITGNRNKNHF 1733

Query: 6840 DLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDNNHLDREE 7019
            DLLVPENIL+FRH RK RILICFNSKN N IDR+ VF N KNVKNSS+VS DNNHLDRE+
Sbjct: 1734 DLLVPENILAFRHCRKLRILICFNSKNLNYIDRDPVFWNGKNVKNSSQVSQDNNHLDREK 1793

Query: 7020 NQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKIC 7166
            NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKIC
Sbjct: 1794 NQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKIC 1842



 Score =  142 bits (359), Expect = 6e-30
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKI+NSVVVVGLYYGFLTTFSIGPSY+FL   RVMEEGTEK+VSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIMNSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKRVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata]
            gi|334085008|emb|CBJ04356.1| Ycf1 protein [Olea europaea
            subsp. cuspidata]
          Length = 1876

 Score = 2407 bits (6237), Expect = 0.0
 Identities = 1262/1805 (69%), Positives = 1387/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    A EMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETAYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            HFR TETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKPLV LLFDS
Sbjct: 321  HFRLTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFCFWFEKPLVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIKN R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F EMIKRRISL
Sbjct: 381  NRWNRPFRYIKNNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFLEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
            PTL+KF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+  K
Sbjct: 441  PTLQKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTK 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NFIEK GINRIHGI+L DTDYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPDTDYQKI 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+  KY 
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSI-LNSRGLSVFSDKEEGRIDSEKGRKYF 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KY   +IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYFQNRIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +ALIRYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGNKEHTEDTNPPDQTDE---VALIRYSQQSDFRRGIIKGSIRAQRRKIVI 736

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK+ FRNW+ RG  FKIVEYTE QT     
Sbjct: 737  WELFQANVHSPLFLDRIKKSLLFSFDISGPIKKIFRNWVGRGSAFKIVEYTEEQTKREEK 796

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ + RKYILLPS IIAKNIGR
Sbjct: 797  KEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAKNIGR 856

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFPFCLKPW +
Sbjct: 857  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPFCLKPWHR 916

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFGSPRKRPSFF+PIF E         
Sbjct: 917  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGSPRKRPSFFEPIFKELEKKIGKFQ 976

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKVSKETKKWVIKSV+  KKI KEL K+NPILLFR R+VEVY 
Sbjct: 977  KKYFLLLKIFKGKIKLLRKVSKETKKWVIKSVVFLKKIRKELLKVNPILLFRSRKVEVYE 1036

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IH+SFSQ  SP+WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1037 SSETKKERDPIISNQMIHKSFSQIASPDWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1096

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  KFFIERIYT+IFLS+IN
Sbjct: 1097 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFKFFIERIYTNIFLSIIN 1155

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1156 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNQNPIEFI--STIKKSLYNISNSKTN 1213

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG+V SK
Sbjct: 1214 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIVHSK 1273

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++WRN V++R + K++N SKW+ Y
Sbjct: 1274 LKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQRRMVKRKNFSKWNLY 1333

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLIDSKK+   EV  L NQK+NFQKYY+YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1334 EKDQLIDSKKENILEVYSLLNQKDNFQKYYKYDLLSYKSINSENKKDSFISRSPFEGNKN 1393

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            QEISYN  T KETFF MLRSIPINNYL   DILYMEK  DRKY DWKI+NFDLRQKVDI 
Sbjct: 1394 QEISYNYNTYKETFFDMLRSIPINNYLGKGDILYMEKTPDRKYLDWKIINFDLRQKVDIG 1453

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   +K++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1454 AWITIDANSNQNTQIVTNNDQIIDQKNIFYLMIPEMNLPNSPKVFFDWMGMNEKILKRPI 1513

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1514 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQNQKINEKQKGSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  +RNQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNRNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LK YLLFQLRWDDTLNQRMINNIKVYC LLRL+DPRKI+ISS+Q+ EMSLDIMLIQKNLT
Sbjct: 1634 LKHYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+LIIEPIRL  K DGQFIMYQTIGI LVHKSKHQTNQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQTNQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I+P++R+T NR+KN  DLLVPENI SFR RRK RILICFNSKNRND+DRN VF NE   
Sbjct: 1754 SITPHERITRNRDKNHLDLLVPENIFSFRRRRKLRILICFNSKNRNDVDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDREINQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]
            gi|328795491|emb|CBR30373.1| Ycf1 protein [Olea europaea
            subsp. europaea]
          Length = 1876

 Score = 2407 bits (6237), Expect = 0.0
 Identities = 1262/1805 (69%), Positives = 1387/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    A EMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETAYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            HFR TETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKPLV LLFDS
Sbjct: 321  HFRLTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFCFWFEKPLVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIKN R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F EMIKRRISL
Sbjct: 381  NRWNRPFRYIKNNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFLEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
            PTL+KF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+  K
Sbjct: 441  PTLQKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTK 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NFIEK GINRIHGI+L DTDYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPDTDYQKI 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+ TKYL
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSI-LNSRGLSVFSDKEEGRIDSEKGTKYL 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KY   +IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYFQNRIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +ALIRYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGNKEHTEDTNPPDQTDE---VALIRYSQQSDFRRGIIKGSIRAQRRKIVI 736

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK+ FRNW+ RG  FKIVEYTE QT     
Sbjct: 737  WELFQANVHSPLFLDRIKKSLLFSFDISGSIKKIFRNWVGRGSAFKIVEYTEEQTKREEK 796

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ + RKYILLPS IIAKNIGR
Sbjct: 797  KEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAKNIGR 856

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFP CLKPW +
Sbjct: 857  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPLCLKPWHR 916

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFGSPRKRPSFF+PIF E         
Sbjct: 917  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGSPRKRPSFFEPIFKELEKKIGKFQ 976

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKVSKETKKWVIKSV+  KKI KEL K+NPILLFR R+VEVY 
Sbjct: 977  KKYFLLLKIFKGKIKLLRKVSKETKKWVIKSVVFLKKIRKELLKVNPILLFRSRKVEVYE 1036

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IH+SFSQ  SP+WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1037 SSETKKERDPIISNQMIHKSFSQIASPDWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1096

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  +FFIERIYT+IFLS+IN
Sbjct: 1097 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFQFFIERIYTNIFLSIIN 1155

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1156 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNQNPIEFI--STIKKSLYNISNSKTN 1213

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG+V SK
Sbjct: 1214 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIVHSK 1273

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++WRN V++R + K++N SKW+ Y
Sbjct: 1274 LKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQRRMVKRKNFSKWNLY 1333

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLIDSKK+   EV  L NQK+NFQKYY+YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1334 EKDQLIDSKKENILEVYSLLNQKDNFQKYYKYDLLSYKSINSENKKDSFISRSPFEGNKN 1393

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            QEISYN  T KETFF MLRSIPINNYL   DILYMEK  DRKY DWKI+NFDLRQKVDI 
Sbjct: 1394 QEISYNYNTYKETFFDMLRSIPINNYLGKGDILYMEKTPDRKYLDWKIINFDLRQKVDIG 1453

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   +K++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1454 AWITIDANSNQNTQIVTNNDQIIDQKNIFYLMIPEMNLPNSPKVFFDWMGMNEKILKRPI 1513

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1514 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQNQKINEKQKGSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  +RNQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNRNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LK YLLFQLRWDDTLNQRMINNIKVYC LLRL+DPRKI+ISS+Q+ EMSLDIMLIQKNLT
Sbjct: 1634 LKHYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+LIIEPIRL  K DGQFIMYQTIGI LVHKSKHQTNQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQTNQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I P++R+T NR+KN  DLLVPENI SFR RRK RILICFNSKNRND+DRN VF NE   
Sbjct: 1754 SIPPHERITRNRDKNHLDLLVPENIFSFRRRRKLRILICFNSKNRNDVDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDREINQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana]
            gi|334084922|emb|CBS29308.1| Ycf1 protein [Olea europaea
            subsp. maroccana]
          Length = 1876

 Score = 2405 bits (6234), Expect = 0.0
 Identities = 1261/1805 (69%), Positives = 1387/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    A EMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETAYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            HFR TETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKPLV LLFDS
Sbjct: 321  HFRLTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFCFWFEKPLVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIKN R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F EMIKRRISL
Sbjct: 381  NRWNRPFRYIKNNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFLEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
            PTL+KF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+  K
Sbjct: 441  PTLQKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTK 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NFIEK GINRIHGI+L DTDYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPDTDYQKI 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+ TKYL
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSI-LNSRGLSVFSDKEEGRIDSEKGTKYL 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KY   +IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYFQNRIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +ALIRYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGNKEHTEDTNPPDQTDE---VALIRYSQQSDFRRGIIKGSIRAQRRKIVI 736

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK+ FRNW+ RG  FKIVEYTE QT     
Sbjct: 737  WELFQANVHSPLFLDRIKKSLLFSFDISGSIKKIFRNWVGRGSAFKIVEYTEEQTKREEK 796

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ + RKYILLPS IIAKNIGR
Sbjct: 797  KEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAKNIGR 856

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFP CLKPW +
Sbjct: 857  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPLCLKPWHR 916

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFGSPRKRPSFF+PIF E         
Sbjct: 917  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGSPRKRPSFFEPIFKELEKKIGKFQ 976

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKVSKETKKWVIKSV+  KKI KEL K+NPILLFR R+VEVY 
Sbjct: 977  KKYFLLLKIFKGKIKLLRKVSKETKKWVIKSVVFLKKIRKELLKVNPILLFRSRKVEVYE 1036

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IH+SFSQ  SP+WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1037 SSETKKERDPIISNQMIHKSFSQIASPDWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1096

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  +FFIERIYT+IFLS+IN
Sbjct: 1097 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFQFFIERIYTNIFLSIIN 1155

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1156 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNQNPIEFI--STIKKSLYNISNSKTN 1213

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG+V SK
Sbjct: 1214 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIVHSK 1273

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++WRN V++R + K++N SKW+ Y
Sbjct: 1274 LKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQRRMVKRKNFSKWNLY 1333

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLIDSKK+   EV  L NQK+NFQKYY+YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1334 EKDQLIDSKKENILEVYSLLNQKDNFQKYYKYDLLSYKSINSENKKDSFISRSPFEGNKN 1393

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            Q+ISYN  T KETFF MLRSIPINNYL   DILYMEK  DRKY DWKI+NFDLRQKVDI 
Sbjct: 1394 QDISYNYNTYKETFFDMLRSIPINNYLGKGDILYMEKTPDRKYLDWKIINFDLRQKVDIG 1453

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   +K++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1454 AWITIDANSNQNTQIVTNNDQIIDQKNIFYLMIPEMNLPNSPKVFFDWMGMNEKILKRPI 1513

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1514 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQNQKINEKQKGSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  +RNQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNRNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LK YLLFQLRWDDTLNQRMINNIKVYC LLRL+DPRKI+ISS+Q+ EMSLDIMLIQKNLT
Sbjct: 1634 LKHYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+LIIEPIRL  K DGQFIMYQTIGI LVHKSKHQTNQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQTNQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I P++R+T NR+KN  DLLVPENI SFR RRK RILICFNSKNRND+DRN VF NE   
Sbjct: 1754 SIPPHERITRNRDKNHLDLLVPENIFSFRRRRKLRILICFNSKNRNDVDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDREINQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059312|gb|ADD72148.1| YCF1
            protein (chloroplast) [Olea europaea]
            gi|334084545|emb|CBR24683.1| Ycf1 protein [Olea europaea
            subsp. europaea] gi|363413092|gb|ADA69984.2| Ycf1
            (chloroplast) [Olea europaea]
            gi|510934462|emb|CCQ09160.1| Ycf1 protein (chloroplast)
            [Olea europaea subsp. europaea]
          Length = 1876

 Score = 2405 bits (6233), Expect = 0.0
 Identities = 1261/1805 (69%), Positives = 1387/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    A EMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETAYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            HFR TETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKPLV LLFDS
Sbjct: 321  HFRLTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFCFWFEKPLVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIKN R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F EMIKRRISL
Sbjct: 381  NRWNRPFRYIKNNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFLEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
            PTL+KF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+  K
Sbjct: 441  PTLQKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTK 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NFIEK GINRIHGI+L DTDYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPDTDYQKI 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+ TKYL
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSI-LNSRGLSVFSDKEEGRIDSEKGTKYL 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KY   +IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYFQNRIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +ALIRYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGNKEHTEDTNPPDQTDE---VALIRYSQQSDFRRGIIKGSIRAQRRKIVI 736

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK+ FRNW+ RG  FKIVEYTE QT     
Sbjct: 737  WELFQANVHSPLFLDRIKKSLLFSFDISGSIKKIFRNWVGRGSAFKIVEYTEEQTKREEK 796

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ + RKYILLPS IIAKNIGR
Sbjct: 797  KEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAKNIGR 856

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFP CLKPW +
Sbjct: 857  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPLCLKPWHR 916

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFGSPRKRPSFF+PIF E         
Sbjct: 917  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGSPRKRPSFFEPIFKELEKKIGKFQ 976

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKVSKETKKWVIKSV+  KKI KEL K+NPILLFR R+VEVY 
Sbjct: 977  KKYFLLLKIFKGKIKLLRKVSKETKKWVIKSVVFLKKIRKELLKVNPILLFRSRKVEVYE 1036

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IH+SFSQ  SP+WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1037 SSETKKERDPIISNQMIHKSFSQIASPDWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1096

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  +FFIERIYT+IFLS+IN
Sbjct: 1097 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFQFFIERIYTNIFLSIIN 1155

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1156 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNQNPIEFI--STIKKSLYNISNSKTN 1213

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG+V SK
Sbjct: 1214 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIVHSK 1273

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++WRN V++R + K++N SKW+ Y
Sbjct: 1274 LKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQRRMVKRKNFSKWNLY 1333

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLIDSKK+   EV  L NQK+NFQKYY+YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1334 EKDQLIDSKKENILEVYSLLNQKDNFQKYYKYDLLSYKSINSENKKDSFISRSPFEGNKN 1393

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            QEISYN  T KE+FF MLRSIPINNYL   DILYMEK  DRKY DWKI+NFDLRQKVDI 
Sbjct: 1394 QEISYNYNTYKESFFDMLRSIPINNYLGKGDILYMEKTPDRKYLDWKIINFDLRQKVDIG 1453

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   +K++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1454 AWITIDANSNQNTQIVTNNDQIIDQKNIFYLMIPEMNLPNSPKVFFDWMGMNEKILKRPI 1513

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1514 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQNQKINEKQKGSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  +RNQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNRNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LK YLLFQLRWDDTLNQRMINNIKVYC LLRL+DPRKI+ISS+Q+ EMSLDIMLIQKNLT
Sbjct: 1634 LKHYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+LIIEPIRL  K DGQFIMYQTIGI LVHKSKHQTNQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQTNQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I P++R+T NR+KN  DLLVPENI SFR RRK RILICFNSKNRND+DRN VF NE   
Sbjct: 1754 SIPPHERITRNRDKNHLDLLVPENIFSFRRRRKLRILICFNSKNRNDVDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDREINQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]
            gi|334084717|emb|CBS29411.1| Ycf1 protein [Olea woodiana
            subsp. woodiana]
          Length = 1876

 Score = 2404 bits (6231), Expect = 0.0
 Identities = 1264/1805 (70%), Positives = 1387/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    A EMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETAYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            +FR TETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKPLV LLFDS
Sbjct: 321  NFRLTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFYFWFEKPLVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIKN R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F+EMIKRRISL
Sbjct: 381  NRWNRPFRYIKNNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFWEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
             TLEKF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+   
Sbjct: 441  ATLEKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTN 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NFIEK GINRIHGI+L DTDYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPDTDYQKI 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+ TKYL
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSIF-NSRGLSVFSDKEEGRIDSEKGTKYL 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KYL   IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYLKNTIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +ALIRYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGTKEHTEDTNPPDQTDE---VALIRYSQQSDFRRGIIKGSIRAQRRKIVI 736

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK  FRNW+ RG  FKIVEYTE QT     
Sbjct: 737  WELFQANVHSPLFLDRIKKSLLFSFDISGPIKPIFRNWVGRGSAFKIVEYTEEQTKREEK 796

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ + RKYILLPS IIAKNIGR
Sbjct: 797  KEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAKNIGR 856

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFPFCLKPW +
Sbjct: 857  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPFCLKPWHR 916

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFGSPRKRPSFF+PIF E         
Sbjct: 917  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGSPRKRPSFFEPIFKELEKKIGKFQ 976

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKVSKETKKWVIKSV+  KKI KEL K+NPILLFR REVEVY 
Sbjct: 977  KKYFLLLKIFKGKIKLLRKVSKETKKWVIKSVVFFKKIRKELLKVNPILLFRSREVEVYE 1036

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IH+SFSQ  SP+WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1037 SSETKKERDPIISNQMIHKSFSQIASPDWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1096

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  KFFIERIYT+IFLS+IN
Sbjct: 1097 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFKFFIERIYTNIFLSIIN 1155

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1156 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNKNPIEFI--STIKKSLYNISNSKTN 1213

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG++ SK
Sbjct: 1214 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIIHSK 1273

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++WRN V++R + K++N  KW+ Y
Sbjct: 1274 LKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQRRMVKRKNFRKWNLY 1333

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLIDSKK+   EV  L NQK+NFQKY +YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1334 EKDQLIDSKKENILEVYSLLNQKDNFQKYSKYDLLSYKSINSENKKDSFISRSPFEGNKN 1393

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            QEISYN  T KETFF MLRSIPINNYL   DILYMEK  DRKY DWKI+NFDLRQKVDIE
Sbjct: 1394 QEISYNYNTYKETFFDMLRSIPINNYLGKGDILYMEKTPDRKYLDWKIINFDLRQKVDIE 1453

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   +K++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1454 AWITIDANSNQNTQIVTNNYQIIDQKNIFYLMIPEMNLPNSPKVFFDWMGMNEKILKRPI 1513

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1514 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQNQKINEKQKGSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  +RNQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNRNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LKRYLLFQLRWDDTLNQRMINNIKVYC LLRL+DPRKI+ISS+Q+ EMSLDIMLIQKNLT
Sbjct: 1634 LKRYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+LIIEPIRL  K DGQFIMYQTIGI LVHKSKHQTNQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQTNQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I P++R+T NR+KN FDLLVPENI SFR RRK RILICFNSKNRND+DRN VF NE   
Sbjct: 1754 SIPPHERITRNRDKNHFDLLVPENIFSFRRRRKLRILICFNSKNRNDVDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDRETNQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>emb|CBR23797.1| Ycf1 protein (chloroplast) [Olea europaea subsp. cuspidata]
          Length = 1876

 Score = 2400 bits (6220), Expect = 0.0
 Identities = 1260/1805 (69%), Positives = 1387/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    A EMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETAYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            HFR TETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKPLV LLFDS
Sbjct: 321  HFRLTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFCFWFEKPLVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIK+ R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F EMIKRRISL
Sbjct: 381  NRWNRPFRYIKDNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFLEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
            PTL+KF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+  K
Sbjct: 441  PTLQKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTK 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NFIEK GINRIHGI+L DTDYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPDTDYQKI 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+ TKYL
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSI-LNSRGLSVFSDKEEGRIDSEKGTKYL 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KY   +IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYFQNRIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +ALIRYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGNKEHTEDTNPPDQTDE---VALIRYSQQSDFRRGIIKGSIRAQRRKIVI 736

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK+ FRNW+ RG  FKIVEYTE QT     
Sbjct: 737  WELFQANVHSPLFLDRIKKSLLFSFDISGPIKKIFRNWVGRGSAFKIVEYTEEQTKREEK 796

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ + RKYILLPS IIAKNIGR
Sbjct: 797  KEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAKNIGR 856

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFPFCLKPW +
Sbjct: 857  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPFCLKPWHR 916

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFGSPRKRPSFF+PIF E         
Sbjct: 917  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGSPRKRPSFFEPIFKELEKKIGKFQ 976

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKVSKETKKWVIKSV+  KKI KEL K+NPILLFR R+VEVY 
Sbjct: 977  KKYFLLLKIFKGKIKLLRKVSKETKKWVIKSVVFLKKIRKELLKVNPILLFRSRKVEVYE 1036

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IH+SFSQ  SP+WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1037 SSETKKERDPIISNQMIHKSFSQIASPDWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1096

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  KFFIERIYT+IFLS+IN
Sbjct: 1097 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFKFFIERIYTNIFLSIIN 1155

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1156 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNQNPIEFI--STIKKSLYNISNSKTN 1213

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG+V SK
Sbjct: 1214 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIVHSK 1273

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++ RN  ++R + K++N SKW+ Y
Sbjct: 1274 LKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQCRNSDYQRRMVKRKNFSKWNLY 1333

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLIDSKK+   EV  L NQK+NFQKYY+YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1334 EKDQLIDSKKENILEVYSLLNQKDNFQKYYKYDLLSYKSINSENKKDSFISRSPFEGNKN 1393

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            QEISYN  T KETFF MLRSIPINNYL   DILYMEK  DRKY DWK++NFDLRQKVDI 
Sbjct: 1394 QEISYNYNTYKETFFDMLRSIPINNYLGKGDILYMEKTPDRKYLDWKMINFDLRQKVDIG 1453

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   +K++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1454 AWITIDANSNQNTQIVTNNDQIIDQKNIFYLMIPEMNLPNSPKVFFDWMGMNEKILKRPI 1513

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1514 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQNQKINEKQKGSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  +RNQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNRNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LK YLLFQLRWDDTLNQRMINNIKVYC LLRL+DPRKI+ISS+Q+ EMSLDIMLIQKNLT
Sbjct: 1634 LKHYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+LIIEPIRL  K DGQFIMYQTIGI LVHKSKHQTNQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQTNQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I+P++R+T NR+KN  DLLVPENI SFR RRK RILICFNSKNRND+DRN VF NE   
Sbjct: 1754 SITPHERITRNRDKNHLDLLVPENIFSFRRRRKLRILICFNSKNRNDVDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDREINQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>emb|CBR23889.1| Ycf1 protein (chloroplast) [Olea europaea subsp. cuspidata]
          Length = 1876

 Score = 2400 bits (6220), Expect = 0.0
 Identities = 1261/1805 (69%), Positives = 1387/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    A EMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETAYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            HFR TETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKPLV LLFDS
Sbjct: 321  HFRLTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFCFWFEKPLVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIK+ R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F EMIKRRISL
Sbjct: 381  NRWNRPFRYIKDNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFLEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
            PTL+KF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+  K
Sbjct: 441  PTLQKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTK 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NFIEK GINRIHGI+L  TDYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPYTDYQKI 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+ TKYL
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSI-LNSRGLSVFSDKEEGRIDSEKGTKYL 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KY   +IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYFQNRIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +ALIRYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGNKEHTEDTNPPDQTDE---VALIRYSQQSDFRRGIIKGSIRAQRRKIVI 736

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK+ FRNW+ RG  FKIVEYTE QT     
Sbjct: 737  WELFQANVHSPLFLDRIKKSLLFSFDISGPIKKIFRNWVGRGSAFKIVEYTEEQTKREEK 796

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ + RKYILLPS IIAKNIGR
Sbjct: 797  KEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAKNIGR 856

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFPFCLKPW +
Sbjct: 857  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPFCLKPWHR 916

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFGSPRKRPSFF+PIF E         
Sbjct: 917  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGSPRKRPSFFEPIFKELEKKIGKFQ 976

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKVSKETKKWVIKSV+  KKI KEL K+NPILLFR R+VEVY 
Sbjct: 977  KKYFLLLKIFKGKIKLLRKVSKETKKWVIKSVVFLKKIRKELLKVNPILLFRSRKVEVYE 1036

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IH+SFSQ  SP+WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1037 SSETKKERDPIISNQMIHKSFSQIASPDWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1096

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  KFFIERIYT+IFLS+IN
Sbjct: 1097 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFKFFIERIYTNIFLSIIN 1155

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1156 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNQNPIEFI--STIKKSLYNISNSKTN 1213

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG+V SK
Sbjct: 1214 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIVHSK 1273

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++ RN V++R + K++N SKW+ Y
Sbjct: 1274 LKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQCRNRVYQRRMVKRKNFSKWNLY 1333

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLIDSKK+   EV  L NQK+NFQKYY+YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1334 EKDQLIDSKKENILEVYSLLNQKDNFQKYYKYDLLSYKSINSENKKDSFISRSPFEGNKN 1393

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            QEISYN  T KETFF MLRSIPINNYL   DILYMEK  DRKY DWKI+NFDLRQKVDI 
Sbjct: 1394 QEISYNYNTYKETFFDMLRSIPINNYLGKGDILYMEKTPDRKYLDWKIINFDLRQKVDIG 1453

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   +K++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1454 AWITIDANSNQNTQIVTNNDQIIDQKNIFYLMIPEMNLPNSPKVFFDWMGMNEKILKRPI 1513

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1514 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQNQKINEKQKGSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  +RNQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNRNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LK YLLFQLRWDDTLNQRMINNIKVYC LLRL+DPRKI+ISS+Q+ EMSLDIMLIQKNLT
Sbjct: 1634 LKHYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+LIIEPIRL  K DGQFIMYQTIGI LVHKSKHQTNQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQTNQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I+P++R+T NR+KN  DLLVPENI SFR RRK RILICFNSKNRND+DRN VF NE   
Sbjct: 1754 SITPHERITRNRDKNHLDLLVPENIFSFRRRRKLRILICFNSKNRNDVDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDREINQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_009110660.1| Ycf1 protein (chloroplast) [Hesperelaea palmeri]
            gi|725798344|emb|CED79820.1| Ycf1 protein (chloroplast)
            [Hesperelaea palmeri]
          Length = 1876

 Score = 2386 bits (6183), Expect = 0.0
 Identities = 1256/1805 (69%), Positives = 1381/1805 (76%), Gaps = 21/1805 (1%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTIT LALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 81   HLALGRPHTITALALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV ELRNSMARIFSILLF+TCVYYLGRIPSPI                   
Sbjct: 201  NKYIRSNKYLVSELRNSMARIFSILLFLTCVYYLGRIPSPILTKKWKETSKMEEKVESEE 260

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEF 2522
                    ASEMKGTKQEQE               K DPNKIDETEEIRVNGKE   DEF
Sbjct: 261  ERDVEIETASEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEF 320

Query: 2523 HFRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDS 2702
            HFRFTETG K  PV E+SYLMN+NEN+DNS+FKI  KK EN +      EKP+V LLFDS
Sbjct: 321  HFRFTETGSKNSPVYEDSYLMNINENHDNSKFKILIKKPENKDLFCFWFEKPVVTLLFDS 380

Query: 2703 KRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISL 2882
             RWNRPFRYIKN R + AV+NEMSQYFF+ CQS GKERISFTYPPSLS F+EMIKRRISL
Sbjct: 381  NRWNRPFRYIKNNRFENAVRNEMSQYFFDTCQSAGKERISFTYPPSLSTFWEMIKRRISL 440

Query: 2883 PTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPK 3062
            PTLEKF+SNELYN WV+TNK+K  + NNEF+NRI+ALDKES+ LNILETRTRL ND+   
Sbjct: 441  PTLEKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLCNDNTTN 500

Query: 3063 KYLSKRYDPFLNRSYRKIIYKNLSPSILK--KTLIENFIEKFGINRIHGILLSDTDYQKF 3236
            +YL K YDPFLN  YR+ I K++SPSI+K  KT I+NF EK GINRIHGI+L D+DYQK 
Sbjct: 501  EYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFQEKVGINRIHGIVLPDSDYQKM 560

Query: 3237 EQKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFS---EGRIDYERRTKYL 3407
            EQK +RFDKK +STEIVDFLTFI+++ +ES S   N +GLS+FS   EGRID E+ TKYL
Sbjct: 561  EQKIDRFDKKPLSTEIVDFLTFINELGKESGSIF-NSRGLSIFSDEEEGRIDSEKGTKYL 619

Query: 3408 KYLLTKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRS 3587
            KYL  +IVTD N Q               VPRW YKL ++LEQ++GE QE+ P+DHEIRS
Sbjct: 620  KYLKNRIVTDTNVQKISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHEIRS 679

Query: 3588 RKAKRVVIFXXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVI 3767
            RKAKRVVIF                     +AL+RYSQQSDFRRG+IKGS+R+QRRK VI
Sbjct: 680  RKAKRVVIFTGNKEHTEDTNPPDQTDTDE-VALLRYSQQSDFRRGIIKGSIRAQRRKIVI 738

Query: 3768 LELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXX 3947
             ELFQANVHSPLFLD+I+KS LFSFDISG IK  FRNW+ RG   KIV+YTE QT     
Sbjct: 739  WELFQANVHSPLFLDRIKKSLLFSFDISGPIKPIFRNWVGRGSASKIVDYTEEQTKREEK 798

Query: 3948 XXXXXXXXX-----ARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGR 4112
                          ARIEIAEAWDTIP AQVIRG ML+TQ I RKYI+LPS IIAKNIGR
Sbjct: 799  KEKDKKEENKRKESARIEIAEAWDTIPFAQVIRGSMLITQSIFRKYIVLPSLIIAKNIGR 858

Query: 4113 ILLFQLPEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDK 4292
            +LL QLPEW ED +EWNREM+VKCTYNGV LSETEFP+NWLTDGIQIKILFPFCLKPW +
Sbjct: 859  MLLLQLPEWYEDLEEWNREMHVKCTYNGVQLSETEFPQNWLTDGIQIKILFPFCLKPWHR 918

Query: 4293 SKVG-SSXXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXX 4469
            SK+  S              FCFLTV GMETELPFG PRKRPSFF+PIF E         
Sbjct: 919  SKLRFSHKDLIMKKKKEKDDFCFLTVLGMETELPFGYPRKRPSFFEPIFKELEKKIGKFQ 978

Query: 4470 XXYFRVLIIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYX 4649
              YF +L IFK K KLLRKV KETKKWVIKSV+  KKI KEL K+NPILLFR REVEVY 
Sbjct: 979  KKYFLLLKIFKGKIKLLRKVLKETKKWVIKSVVFFKKIRKELLKVNPILLFRSREVEVYE 1038

Query: 4650 XXXXXXXXXXXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEK 4829
                         NQ+IHESFSQ  SP WTN SLTEKKMKDLTDRT+TI NQIERI KEK
Sbjct: 1039 SSETKKERDPIISNQMIHESFSQIASPGWTNSSLTEKKMKDLTDRTNTIRNQIERITKEK 1098

Query: 4830 KKVTPRINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLIN 5009
            KKVTP IN +S NKTSYNAKR EKWQILKRRNAR+I KLPF  +FFIERIYT+IFLS+IN
Sbjct: 1099 KKVTPEIN-ISLNKTSYNAKRLEKWQILKRRNARLISKLPFVFQFFIERIYTNIFLSIIN 1157

Query: 5010 IPRMNTEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTN 5189
            IPRM  + FLESTKKI++KSIYNNE  Q+               STIKKSL NISNSKTN
Sbjct: 1158 IPRMKRKLFLESTKKIMNKSIYNNETSQEIINKKNQNPIEFI--STIKKSLYNISNSKTN 1215

Query: 5190 SHTFYDLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSK 5369
            SH FYDLSY+SQAYVFYKLSQ QV N YKL+S L+YQ IPFFLKPEIKDSFETQG+V SK
Sbjct: 1216 SHIFYDLSYLSQAYVFYKLSQTQVINLYKLKSFLQYQGIPFFLKPEIKDSFETQGIVHSK 1275

Query: 5370 LGDKKLPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSY 5549
            L D +LP+ EMNQWKNWLRGHYQYDLSQIRWSR +P++WRN V++R + K++N SKW+ Y
Sbjct: 1276 LRDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQRRMVKRKNFSKWNLY 1335

Query: 5550 EKDQLIDSKKQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKN 5723
            EKDQLID KK+   EV  L NQK+NFQKYY+YDLLSYK IN E K + F  RSPF+GNKN
Sbjct: 1336 EKDQLIDYKKENILEVYSLLNQKDNFQKYYKYDLLSYKSINSENKKDSFISRSPFEGNKN 1395

Query: 5724 QEISYN--TPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIE 5897
            QEISYN  T K+TFF MLRSIPINN L   DILYMEK  DRKY DWKI+NFDLRQKVDIE
Sbjct: 1396 QEISYNYNTYKDTFFDMLRSIPINNSLGKGDILYMEKTPDRKYLDWKIINFDLRQKVDIE 1455

Query: 5898 AWIMIDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPI 6077
            AWI ID N NQNT+I TNN Q   KK++FYL IPE+NLPNS K FFDW+GMNEK+LKRPI
Sbjct: 1456 AWITIDANSNQNTQIVTNNYQIIDKKNIFYLMIPEMNLPNSQKVFFDWMGMNEKILKRPI 1515

Query: 6078 SNLEHWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIAS 6257
             NLE WFFPEF+LLYN YKTK WFIP                           GSFLI S
Sbjct: 1516 LNLELWFFPEFLLLYNTYKTKSWFIPSKLLLLNLNRNENSNENQKINEKQK--GSFLIPS 1573

Query: 6258 NKK--HRNQEEKEPTSRGDLGSVLS-QQKDIEESNARSXXXXXXXXXXXXXXTEAELDFF 6428
            NKK  ++NQEEK+ TS+GDLGSVLS QQKDIEE  ARS              TEAELD F
Sbjct: 1574 NKKIKNQNQEEKKTTSQGDLGSVLSNQQKDIEEDYARSDMKKGKKKKQYKSNTEAELDLF 1633

Query: 6429 LKRYLLFQLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLT 6608
            LKRYLLFQLRWDDTLNQRMINNIKVYC LLRL+DPR I+ISS+Q  EMSLDIMLIQKNLT
Sbjct: 1634 LKRYLLFQLRWDDTLNQRMINNIKVYCFLLRLIDPRTISISSIQSGEMSLDIMLIQKNLT 1693

Query: 6609 LTELMKKGVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDE 6788
            L ELMK+G+ IIEPIR+  K DGQFIMYQTIGI LVHKSKHQ NQ+Y+EQRYV+KNN DE
Sbjct: 1694 LPELMKRGIFIIEPIRVSVKNDGQFIMYQTIGILLVHKSKHQANQRYREQRYVAKNNFDE 1753

Query: 6789 AISPYQRLTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNV 6968
            +I P++R+T NR+KN  DLLVPENI SFR RRK RILICFNSKNRNDIDRN VF NE   
Sbjct: 1754 SIPPHERITRNRDKNHLDLLVPENIFSFRRRRKLRILICFNSKNRNDIDRNPVFCNE--- 1810

Query: 6969 KNSSKVSHDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 7148
            KNSS+V  D+NHLDRE NQLMK K FLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY
Sbjct: 1811 KNSSQVLGDSNHLDRETNQLMKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLY 1870

Query: 7149 PRLKI 7163
            PRLKI
Sbjct: 1871 PRLKI 1875



 Score =  143 bits (361), Expect = 3e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>ref|YP_009162320.1| photosystem I assembly protein Ycf1 (chloroplast) [Scutellaria
            baicalensis] gi|827345828|gb|AKJ77129.1| photosystem I
            assembly protein Ycf1 (chloroplast) [Scutellaria
            baicalensis]
          Length = 1845

 Score = 2367 bits (6135), Expect = 0.0
 Identities = 1252/1792 (69%), Positives = 1367/1792 (76%), Gaps = 12/1792 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            D GSTTRNSMRNFSI C+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDSGSTTRNSMRNFSIHCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQN SIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNRSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV EL NS ARIFSILLF+TCVYYLGRIPSP+F                  
Sbjct: 201  NKYIRSNKYLVSELINSTARIFSILLFVTCVYYLGRIPSPLFTKKGEETSKTEERVETP- 259

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFR 2531
                     SE+K TK+EQEG              +A P KIDETEEIRVNGKE+EF+F 
Sbjct: 260  ---------SELKATKEEQEGSAEEDPSISFFSEERAYPKKIDETEEIRVNGKENEFNFG 310

Query: 2532 FTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNE----PXXXXXEKPLVNLLFD 2699
            FT T Y+ RPVSEESYLMN NE  DNSRFKI DKKT+N +           KPLV +LFD
Sbjct: 311  FTGTVYQNRPVSEESYLMNTNEKQDNSRFKIVDKKTKNKDFVFFDKPLVTIKPLVTILFD 370

Query: 2700 SKRWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRIS 2879
            SKRWNRPFR+IKN   + AV+ EMSQYFF+ CQSDGKERISFTYPPSLSIF EMIKRRIS
Sbjct: 371  SKRWNRPFRFIKNNHFEKAVRTEMSQYFFDTCQSDGKERISFTYPPSLSIFLEMIKRRIS 430

Query: 2880 LPTLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYP 3059
             P LEK++ N+ Y+PWV+TNKQKGKS NNEF+NRI+ALDKE  SLNI ETRTRL N D  
Sbjct: 431  PPKLEKYSFNDPYSPWVYTNKQKGKSLNNEFINRIKALDKEETSLNIFETRTRLCNADST 490

Query: 3060 KKYLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFE 3239
            K+YLSKRYDPFLN SYRK IYKN S   L K LIENF++ FGINRIHGIL+ D  YQ+FE
Sbjct: 491  KEYLSKRYDPFLNGSYRKTIYKNPS---LSKFLIENFLDPFGINRIHGILIPDAAYQEFE 547

Query: 3240 QKKNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYLL 3419
            QK  RFDKK +STEIV F TF+SK VRES STN N KG SLFSEGRID E+ TK   Y L
Sbjct: 548  QKITRFDKKPLSTEIVYFFTFMSKFVRESGSTNLNPKGPSLFSEGRIDSEKGTKIFNYFL 607

Query: 3420 TKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAK 3599
             +  TD NGQ               +PR SY+LITDLEQQS +YQEDVP++H+IRSRK K
Sbjct: 608  NR--TDPNGQKISRKSIRIKEISKKIPRRSYQLITDLEQQSRDYQEDVPLEHQIRSRKGK 665

Query: 3600 RVVIFXXXXXXXXXXXXXXXXXXXXX-IALIRYSQQSDFRRGLIKGSMRSQRRKTVILEL 3776
            RVVI                       +ALIRYSQQSDFRRG+IKGSMR+QRRK VI EL
Sbjct: 666  RVVILTANNENTDPNTTDTNLPDQINEVALIRYSQQSDFRRGIIKGSMRAQRRKVVIFEL 725

Query: 3777 FQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXXXX 3956
            FQAN +S LF++++Q+S LFSFDIS  IK+   NW+ +G+   +VE T+ QT        
Sbjct: 726  FQANANSLLFVERLQESPLFSFDISRLIKKILINWVGKGQ---VVECTKEQTKREEKKEK 782

Query: 3957 XXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQLPE 4136
                  ARI+IAEAWD+IP AQVIRGCMLLTQ I RKYILLPS IIAKNIGRI L QLPE
Sbjct: 783  KKRKEKARIKIAEAWDSIPFAQVIRGCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPE 842

Query: 4137 WSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSSXX 4316
            WSED QEWNRE+++KCTYNGVPLSETEFPKNWLTDGIQIKILFPFC+KPW KSK+ S   
Sbjct: 843  WSEDLQEWNREIHLKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCMKPWHKSKLRSFQK 902

Query: 4317 XXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVLII 4496
                       FCFLTVWGMETELPF S RKR  FFKPI  EF          YFRVL +
Sbjct: 903  DLMKKTKEKDDFCFLTVWGMETELPFCSSRKRLPFFKPILKEFEKKIGKCKKKYFRVLTV 962

Query: 4497 FKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXXXX 4676
            FK KTKLLRKVSKETKKWVIKSVI  KKI+K+LSK+NPILLFRLREV VY          
Sbjct: 963  FKGKTKLLRKVSKETKKWVIKSVIFIKKILKKLSKVNPILLFRLREVGVYASSEIKEEKD 1022

Query: 4677 XXXXNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTPRINN 4856
                NQIIHESFSQ  SP+WTN SLTEKKMKDLTDRTSTI NQIERI K+KKKVTPRINN
Sbjct: 1023 SIRSNQIIHESFSQIASPSWTNSSLTEKKMKDLTDRTSTIRNQIERITKDKKKVTPRINN 1082

Query: 4857 LSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMNTEFF 5036
            LSP  TSYNAKRFEK +ILKR NA++I KL   LKFFIE+IYT +FLS+INIPR+NTE F
Sbjct: 1083 LSP--TSYNAKRFEKREILKRTNAQLIYKLLPLLKFFIEKIYTALFLSIINIPRINTELF 1140

Query: 5037 LESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFYDLSY 5216
            L+ TK+I+DKSIYNNERKQ+               STIKK LDNISN K NSH FYDLSY
Sbjct: 1141 LKLTKQIIDKSIYNNERKQEKINKKNKTPIPFI--STIKKPLDNISNIKINSHFFYDLSY 1198

Query: 5217 VSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKKLPNY 5396
            V QAYVFYKLSQIQVSNS  LR V++YQ IP FLKP+IKDSFET+GM  SKL DKKLP+Y
Sbjct: 1199 VPQAYVFYKLSQIQVSNS--LRPVVQYQGIPPFLKPKIKDSFETRGMFHSKLADKKLPSY 1256

Query: 5397 EMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQLIDSK 5576
            EMN WK WLRGHYQY LSQIRWSR +PEKWRN V++R IAKKENLSK HS EKD  ++ K
Sbjct: 1257 EMNPWKTWLRGHYQYHLSQIRWSRLIPEKWRNTVYQRRIAKKENLSKRHSSEKDSFMNYK 1316

Query: 5577 KQ--FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISYNTPK 5750
            KQ  FEV  LSN K+NF KY RYDLLSYKF+NYE K ECFFYRSP  GNKN+ ISYNT K
Sbjct: 1317 KQKQFEVYSLSNPKDNFLKYIRYDLLSYKFLNYENKAECFFYRSPLHGNKNKGISYNTSK 1376

Query: 5751 ETFFSMLRSIPINNYLEGVDILYMEKM----ADRKYFDWKILNFDLRQKVDIEAWIMIDT 5918
            ET F MLR+IPI N L  VDILYMEK     ADRKYFD KI  F +RQK+ IEA I+IDT
Sbjct: 1377 ETLFDMLRNIPIKNDLGKVDILYMEKHMEKPADRKYFDRKIFYFFIRQKIGIEASIIIDT 1436

Query: 5919 NRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWF 6098
            NRNQNT+IRTNNSQ  SKKDLFYL IPEINL NSHKGFFDW+GMNEK +KRPISNLE WF
Sbjct: 1437 NRNQNTQIRTNNSQIISKKDLFYLMIPEINLANSHKGFFDWMGMNEKKVKRPISNLELWF 1496

Query: 6099 FPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQ 6278
            FPEFVLLY  YK KPWFIP                           GSFLIASNKK+RNQ
Sbjct: 1497 FPEFVLLYKTYKLKPWFIPSKLLLLNLDISETKETKKINEKEK---GSFLIASNKKYRNQ 1553

Query: 6279 EEKEPTSRGDLGSVLSQQKDIEESNA-RSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQL 6455
            EEKEPTS+ D   VLSQQKDIE + A RS              TEAELD FLKRYLLFQL
Sbjct: 1554 EEKEPTSQVDRRYVLSQQKDIEANYATRSDMKKGKNKKQYKSNTEAELDLFLKRYLLFQL 1613

Query: 6456 RWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGV 6635
            RWD+TLNQR+INNIK YCLLLRL+DPRKITISS+QKREM+LDIMLIQKNLTL+ELMKKGV
Sbjct: 1614 RWDETLNQRLINNIKAYCLLLRLIDPRKITISSIQKREMNLDIMLIQKNLTLSELMKKGV 1673

Query: 6636 LIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLT 6815
            LI+EPIRL GKKDGQFIM+QTIGISLVHKSKHQTNQK QEQRY S NN DE ISP+Q++ 
Sbjct: 1674 LILEPIRLSGKKDGQFIMHQTIGISLVHKSKHQTNQKSQEQRYASNNNFDETISPHQKII 1733

Query: 6816 GNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHD 6995
            GNRNKN FDLLVPENIL+FRH RK RILICFNSKNRN IDRN VF N KNVKNSS+VS D
Sbjct: 1734 GNRNKNHFDLLVPENILAFRHCRKLRILICFNSKNRNYIDRNPVFWNGKNVKNSSQVSQD 1793

Query: 6996 NNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYP 7151
            NNHLDRE+NQLMK KLFLWPN RLEDLACMNRYWFDTNNGSRFSMLRIHLYP
Sbjct: 1794 NNHLDREKNQLMKLKLFLWPNSRLEDLACMNRYWFDTNNGSRFSMLRIHLYP 1845



 Score =  144 bits (362), Expect = 2e-30
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   RVMEEGTEK+VSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKRVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPLHLALG 85


>gb|AMQ33800.1| hypothetical chloroplast RF19 (chloroplast) [Stachys sylvatica]
          Length = 1847

 Score = 2347 bits (6081), Expect = 0.0
 Identities = 1228/1795 (68%), Positives = 1368/1795 (76%), Gaps = 11/1795 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            N  IRSNKYLV EL NS ARI SILLFITCVYYLGRIPSP+F                  
Sbjct: 201  NVLIRSNKYLVSELTNSTARILSILLFITCVYYLGRIPSPLFTKKLKETSKTGAGERVES 260

Query: 2352 XXXXXXXX--ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFH 2525
                      ASEMKGTKQEQEG               ADPNKIDETEEI+VNGKE EFH
Sbjct: 261  EEERDVEIETASEMKGTKQEQEGSTEEDPSLYFFSEEGADPNKIDETEEIQVNGKEKEFH 320

Query: 2526 FRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSK 2705
            FRFTETGY+  PVSEESYLMN N+N DNSR +IFD+KTEN E      +KPL+ +LFDS 
Sbjct: 321  FRFTETGYQNGPVSEESYLMNFNDNQDNSRLQIFDQKTENKE--LIFFDKPLITILFDSN 378

Query: 2706 RWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLP 2885
            RWNRPFRY KN R D AV+NEMSQYFF+ICQSDGKERISFTYPPSLSIF EMIK+RIS P
Sbjct: 379  RWNRPFRYRKNKRFDKAVRNEMSQYFFDICQSDGKERISFTYPPSLSIFLEMIKKRISPP 438

Query: 2886 TLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKK 3065
             +EKF+ NELYNPWV+TNKQK K+ NNEFLNRI+ALDKE+I LNILETRTRL NDD  K+
Sbjct: 439  IIEKFSFNELYNPWVYTNKQKEKNLNNEFLNRIKALDKENIYLNILETRTRLCNDDSTKE 498

Query: 3066 YLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQK 3245
            YLSK+YDP LN SYRK IYK+ SPS LKKTLIEN ++ FGINRIHGILL DTDYQ+FEQK
Sbjct: 499  YLSKKYDPLLNGSYRKTIYKSPSPSTLKKTLIENLLDPFGINRIHGILLPDTDYQEFEQK 558

Query: 3246 KNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYL--L 3419
             NRF++KS+STEIV+FLTFISK V++S STN N   LSLFSEG+ID+++ TKY  YL  L
Sbjct: 559  INRFEQKSLSTEIVNFLTFISKFVKKSGSTNLNPSSLSLFSEGKIDFQKETKYFNYLLNL 618

Query: 3420 TKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAK 3599
             KIVTDANGQ               +PRWSYKLITDLEQQS EY+ED+P+DH+IRSR+ K
Sbjct: 619  NKIVTDANGQKINRKSIRIKEIKKKLPRWSYKLITDLEQQSREYKEDIPIDHQIRSRRGK 678

Query: 3600 RVVIF---XXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVIL 3770
            RVVIF                        +AL+RY QQ+DFR G+IKGSMR+QRRK VIL
Sbjct: 679  RVVIFTATKQTTDPNTTNTKMSDKSQRKEVALMRYLQQADFRHGIIKGSMRAQRRKLVIL 738

Query: 3771 ELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXX 3950
            ELF+AN HSPLFL+++QKS    FDISG  K  F+N + +GE FKIVEYT+ QT      
Sbjct: 739  ELFRANPHSPLFLERLQKS---PFDISGLRKLIFKNGLDKGEAFKIVEYTKEQTKRKEKK 795

Query: 3951 XXXXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQL 4130
                    ARI++AEAW  IP AQ IRGC+LLTQ I R+YILLPS IIAKN+GRI L QL
Sbjct: 796  EQNKSKEKARIKVAEAWKRIPFAQGIRGCVLLTQSIFRRYILLPSLIIAKNLGRIFLLQL 855

Query: 4131 PEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSS 4310
            PEWSEDFQEWN+E+++KCTYNG PLSETEFPKNWLTDGIQIKILFPFCLKP  KSK+ S 
Sbjct: 856  PEWSEDFQEWNKEIHIKCTYNGSPLSETEFPKNWLTDGIQIKILFPFCLKPSQKSKLRSF 915

Query: 4311 XXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVL 4490
                         FCFLTVWGMETELPF SPRK+PSFFKPI  EF          YFRVL
Sbjct: 916  QKDLMKKKKQKGDFCFLTVWGMETELPFCSPRKKPSFFKPILKEFEKKIGKFKKKYFRVL 975

Query: 4491 IIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXX 4670
             +FK KTKLLRKVSKETKKWV+KSV   K+IIKELS +NPILLFRLREV VY        
Sbjct: 976  TVFKGKTKLLRKVSKETKKWVLKSVFFRKRIIKELSNVNPILLFRLREVGVYESSKIKEE 1035

Query: 4671 XXXXXXNQIIHESFSQSE--SPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTP 4844
                  NQIIHESF+Q +  SP+WTN SLTE KMK+L DRTSTI NQIERI KEKKKVTP
Sbjct: 1036 KDSIINNQIIHESFNQIQIASPSWTNSSLTENKMKNLADRTSTIRNQIERITKEKKKVTP 1095

Query: 4845 RINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMN 5024
            RINNLSP  TS NAK+FE  ++LKR NA++ICKL  FLKFFIE+IYTDIFLS+INIPR+N
Sbjct: 1096 RINNLSP--TSSNAKKFENQEMLKRINAQLICKLSPFLKFFIEKIYTDIFLSIINIPRIN 1153

Query: 5025 TEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFY 5204
            TE  L+ TKKI+DKSIYNNERKQ+               S+IKK LDNISN K  S  FY
Sbjct: 1154 TELLLKLTKKIIDKSIYNNERKQE--RINKKKKTPIPFISSIKKPLDNISNIKATSDIFY 1211

Query: 5205 DLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKK 5384
            DLSYV QAYVFYKL++IQV+NS  LRSV++YQ IPFFLKP+IKDSFETQGM+ SK  D K
Sbjct: 1212 DLSYVPQAYVFYKLAKIQVTNS--LRSVVQYQGIPFFLKPKIKDSFETQGMLDSKSADNK 1269

Query: 5385 LPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQL 5564
            LP+YEMN WK+WLRGH QY LSQI WS+ +PEKWRNI  +  IAKK N SK HSYEK+ L
Sbjct: 1270 LPSYEMNPWKSWLRGHSQYHLSQIGWSKLIPEKWRNIFRQHRIAKKANFSKRHSYEKNPL 1329

Query: 5565 IDSK--KQFEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISY 5738
            ++SK  KQFEV  L NQK+NF KYYRYDLLSYKF++YE KTECFFY S FQGN N EI Y
Sbjct: 1330 MNSKKQKQFEVYSLFNQKDNFLKYYRYDLLSYKFLHYERKTECFFYGSSFQGNTNHEIYY 1389

Query: 5739 NTPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDT 5918
              PK+    MLR+IPI N L  +   + EK  +RKYFDW+IL FD  QKVDIEAWI IDT
Sbjct: 1390 TIPKKKKLDMLRNIPIKNDLGKI---HTEKPVNRKYFDWEILKFDFIQKVDIEAWIRIDT 1446

Query: 5919 NRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWF 6098
            NRNQNT+IRT NSQ + KKD F L+IPEINLPNSHKGF DW+GMNEKMLK PISNLE WF
Sbjct: 1447 NRNQNTQIRTKNSQISYKKDFFDLKIPEINLPNSHKGFCDWMGMNEKMLKHPISNLELWF 1506

Query: 6099 FPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQ 6278
            FPEF LLY  YK KPWFIP                           G+FLIASNKKHRNQ
Sbjct: 1507 FPEFFLLYKTYKMKPWFIP------SKLLLLNLNRSENKKINEKEKGAFLIASNKKHRNQ 1560

Query: 6279 EEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLR 6458
            E+KEPTS G+  SVLSQQKDIEE+ ARS              T+AEL  FLKRYLLFQLR
Sbjct: 1561 EDKEPTSPGERRSVLSQQKDIEENYARS---NMKKGKKQKQYTKAELHLFLKRYLLFQLR 1617

Query: 6459 WDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVL 6638
            WD TLNQRMI NI VYCLLL+L+D RKITISS+QK+EMSLDIM+I KNLTL+E MKKGV 
Sbjct: 1618 WDGTLNQRMIKNINVYCLLLKLIDLRKITISSIQKKEMSLDIMMINKNLTLSEFMKKGVF 1677

Query: 6639 IIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTG 6818
            I+EPIRL  +KDG+ IMYQTIGISLVHK+KH   QKYQEQ + S NN +E IS +QR+TG
Sbjct: 1678 ILEPIRLSEQKDGKLIMYQTIGISLVHKNKH---QKYQEQGHASNNNFNETISTHQRITG 1734

Query: 6819 NRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDN 6998
            NR+KNRFDLLV EN+LSFR RRK RILIC NSKNRN I++N VF    NVKNSS+VSHDN
Sbjct: 1735 NRDKNRFDLLVTENLLSFRRRRKLRILICLNSKNRNSIEKNPVFW---NVKNSSQVSHDN 1791

Query: 6999 NHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKI 7163
            NHLDR++NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRF MLRIHLYPRLKI
Sbjct: 1792 NHLDRDKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFGMLRIHLYPRLKI 1846



 Score =  142 bits (359), Expect = 6e-30
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY P+  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPMHLALG 85


>gb|AMQ33624.1| hypothetical chloroplast RF19 (chloroplast) [Stachys chamissonis]
          Length = 1847

 Score = 2343 bits (6073), Expect = 0.0
 Identities = 1226/1795 (68%), Positives = 1366/1795 (76%), Gaps = 11/1795 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            N  IRSNKYLV EL NS ARI SILLFITCVYYLGRIPSP+F                  
Sbjct: 201  NVLIRSNKYLVSELTNSTARILSILLFITCVYYLGRIPSPLFTKKLKETSKTGAGERVES 260

Query: 2352 XXXXXXXX--ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFH 2525
                      ASEMKGTKQEQEG               ADPNKIDETEEI+VNGKE EFH
Sbjct: 261  EEERDVEIETASEMKGTKQEQEGSTEEDPSLYFFSEEGADPNKIDETEEIQVNGKEKEFH 320

Query: 2526 FRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSK 2705
            FRFTETGY+  PVSEESYLMN N+N DNSR +IFD+KTEN E      +KPL+ +LFDS 
Sbjct: 321  FRFTETGYQNGPVSEESYLMNFNDNQDNSRLQIFDQKTENKE--LIIFDKPLITILFDSN 378

Query: 2706 RWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLP 2885
            RWNRPFRY KN R D AV+NEMSQYFF+ICQSDGKERISFTYPPSLSIF EMIK+RIS P
Sbjct: 379  RWNRPFRYRKNKRFDKAVRNEMSQYFFDICQSDGKERISFTYPPSLSIFLEMIKKRISPP 438

Query: 2886 TLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKK 3065
             +EKF+ NELYNPWV+TNKQK K+ NNEFLNRI+ALD E+I LNILETRTRL NDD  K+
Sbjct: 439  IIEKFSFNELYNPWVYTNKQKEKNLNNEFLNRIKALDNENIYLNILETRTRLCNDDSTKE 498

Query: 3066 YLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQK 3245
            YLSK+YDP LN SYRK IYK+ SPS LKKTLIEN ++ FGINRIHGILL DTDYQ+FEQK
Sbjct: 499  YLSKKYDPLLNGSYRKTIYKSPSPSNLKKTLIENLLDPFGINRIHGILLPDTDYQEFEQK 558

Query: 3246 KNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYL--L 3419
             NRF++KS+STEIV+F TFISK V++S STN N   LSLFSEG+ID+++ TKY  YL  L
Sbjct: 559  INRFEQKSLSTEIVNFFTFISKFVKKSGSTNLNPSSLSLFSEGKIDFQKETKYFNYLLNL 618

Query: 3420 TKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAK 3599
             KIVTDANGQ               +PRWSYKLITDLEQQS EY+ED+P+DH+IRSR+ K
Sbjct: 619  NKIVTDANGQKMNRKSIRIKEIKKKLPRWSYKLITDLEQQSREYKEDIPIDHQIRSRRGK 678

Query: 3600 RVVIF---XXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVIL 3770
            RVVIF                        +AL+RY QQ+DFR G+IKGSMR+QRRK VI 
Sbjct: 679  RVVIFTATKQTTDPNTTNTKMSDKSQRKEVALMRYLQQADFRHGIIKGSMRAQRRKLVIF 738

Query: 3771 ELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXX 3950
            ELF+AN HSPLFL+++QKS    FDISG  K  F+N + +GE F+IVEYT+ QT      
Sbjct: 739  ELFRANPHSPLFLERLQKS---PFDISGLRKLIFKNGLDKGEAFQIVEYTKEQTKRKEKK 795

Query: 3951 XXXXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQL 4130
                    ARI++AEAW  IP AQ IRGC+LLTQ I R+YILLPS IIAKN+GRI L QL
Sbjct: 796  EQNKSKEKARIKVAEAWKRIPFAQGIRGCVLLTQSIFRRYILLPSLIIAKNLGRIFLLQL 855

Query: 4131 PEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSS 4310
            PEWSEDFQEWN+E+++KCTYNG PLSETEFPKNWLTDGIQIKILFPFCLKP  KSK+ S 
Sbjct: 856  PEWSEDFQEWNKEIHIKCTYNGSPLSETEFPKNWLTDGIQIKILFPFCLKPSQKSKLRSF 915

Query: 4311 XXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVL 4490
                         FCFLTVWGMETELPF SPRK+PSFFKPI  EF          YFRVL
Sbjct: 916  QKDLMKKKKQKGDFCFLTVWGMETELPFCSPRKKPSFFKPILKEFEKKIGKFKKKYFRVL 975

Query: 4491 IIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXX 4670
             +FK KTKLLRKVSKETKKWV+KSV   K+IIKELS +NPILLFRLREV VY        
Sbjct: 976  TVFKGKTKLLRKVSKETKKWVLKSVFFRKRIIKELSNVNPILLFRLREVGVYESSKIKEE 1035

Query: 4671 XXXXXXNQIIHESFSQSE--SPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTP 4844
                  NQIIHESF+Q +  SP+WTN SLTE KMKDL DRTSTI NQIERI KEKKKVTP
Sbjct: 1036 KDSIINNQIIHESFNQMQIASPSWTNSSLTENKMKDLADRTSTIRNQIERITKEKKKVTP 1095

Query: 4845 RINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMN 5024
            RINNLSP  TS NAK+FE  ++LKR NA++ICKL  FLKFFIE+IYTDIFLS+INIPR+N
Sbjct: 1096 RINNLSP--TSSNAKKFENQEMLKRINAQLICKLSPFLKFFIEKIYTDIFLSIINIPRIN 1153

Query: 5025 TEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFY 5204
            TE  L+ TKKI+DKSIYNNERKQ+               S+IKK LDNISN K  S  FY
Sbjct: 1154 TELLLKLTKKIIDKSIYNNERKQE--RINKKKKTPIPFISSIKKPLDNISNIKATSEIFY 1211

Query: 5205 DLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKK 5384
            DLSYV QAYVFYKL++IQV+NS  LRSV++YQ IPFFLKP+IKDSFETQGM+ SK  D K
Sbjct: 1212 DLSYVPQAYVFYKLAKIQVTNS--LRSVVQYQGIPFFLKPKIKDSFETQGMLDSKSADNK 1269

Query: 5385 LPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQL 5564
            LP+YEMN WK+WLRGH QY LSQI WS+ +PEKWRNI  +  IAKK N SK HSYEK+ L
Sbjct: 1270 LPSYEMNPWKSWLRGHSQYHLSQIGWSKLIPEKWRNIFRQHRIAKKANFSKRHSYEKNPL 1329

Query: 5565 IDSK--KQFEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISY 5738
            ++SK  KQFEV  L NQK+NF KYYRYDLLSYKF++YE KTECFFY S FQGN N EI Y
Sbjct: 1330 MNSKKQKQFEVYSLFNQKDNFLKYYRYDLLSYKFLHYERKTECFFYGSSFQGNTNHEIYY 1389

Query: 5739 NTPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDT 5918
              PK+  F MLR+IPI N L  +   + EK  +RKYFDW+IL  D  QKVDIEAWI IDT
Sbjct: 1390 TIPKKKIFDMLRNIPIKNDLGKI---HTEKPVNRKYFDWEILKLDFIQKVDIEAWIRIDT 1446

Query: 5919 NRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWF 6098
            NRNQNT+IRT NSQ + KKD F L+IPEINLPNSHKGF DW+GMNEKMLK PISNLE WF
Sbjct: 1447 NRNQNTQIRTKNSQISYKKDFFDLKIPEINLPNSHKGFCDWMGMNEKMLKHPISNLELWF 1506

Query: 6099 FPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQ 6278
            FPEFVLLY  YK KPWFIP                           G+FLIASNKKHRNQ
Sbjct: 1507 FPEFVLLYKTYKMKPWFIP------SKLLLLNLNRSENKKINEKEKGAFLIASNKKHRNQ 1560

Query: 6279 EEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLR 6458
            E+KEPTS G+  SVLSQQKDIEE+ ARS              T+AEL  FLKRYLLFQLR
Sbjct: 1561 EDKEPTSPGERRSVLSQQKDIEENYARS---NMKKGKKQKQYTKAELHLFLKRYLLFQLR 1617

Query: 6459 WDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVL 6638
            WD TLNQRMI NI VYCLLL+L+D RKITISS+QK+EMSLDIM+I KNLTL+E MK+GV 
Sbjct: 1618 WDGTLNQRMIKNINVYCLLLKLIDLRKITISSIQKKEMSLDIMMINKNLTLSEFMKRGVF 1677

Query: 6639 IIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTG 6818
            I+EPIRL  +KDG+FIMYQTIGISLVHK+KH   QKYQEQ + S NN +E IS +QR+TG
Sbjct: 1678 ILEPIRLSEQKDGKFIMYQTIGISLVHKNKH---QKYQEQGHASNNNFNETISTHQRITG 1734

Query: 6819 NRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDN 6998
             R+KNRFDLLV ENILSFR RRK RILIC NSKNRN I++N VF    NVKNSS+VSHDN
Sbjct: 1735 TRDKNRFDLLVTENILSFRLRRKLRILICLNSKNRNSIEKNPVFW---NVKNSSQVSHDN 1791

Query: 6999 NHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKI 7163
            NHLDR++NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRF MLRIHLYPRLKI
Sbjct: 1792 NHLDRDKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFGMLRIHLYPRLKI 1846



 Score =  142 bits (359), Expect = 6e-30
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY P+  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPMHLALG 85


>gb|AMQ32920.1| hypothetical chloroplast RF19 (chloroplast) [Stenogyne haliakalae]
          Length = 1848

 Score = 2343 bits (6073), Expect = 0.0
 Identities = 1226/1795 (68%), Positives = 1366/1795 (76%), Gaps = 11/1795 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            N  IRSNKYLV EL NS ARI SILLFITCVYYLGRIPSP+F                  
Sbjct: 201  NVLIRSNKYLVSELTNSTARILSILLFITCVYYLGRIPSPLFTKKLKETSKTGAGERVES 260

Query: 2352 XXXXXXXX--ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFH 2525
                      ASEMKGTKQEQEG               ADPNKIDETEEI+VNGKE EFH
Sbjct: 261  EEERDVEIETASEMKGTKQEQEGSTEEDPSLYFFSEEGADPNKIDETEEIQVNGKEKEFH 320

Query: 2526 FRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSK 2705
            FRFTETGY+  PVSEESYLMN N+N DNSR +IFD+KTEN E      +KPL+ +LFDS 
Sbjct: 321  FRFTETGYQNGPVSEESYLMNFNDNQDNSRLQIFDQKTENKE--LIIFDKPLITILFDSN 378

Query: 2706 RWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLP 2885
            RWNRPFRY KN R D AV+NEMSQYFF+ICQSDGKERISFTYPPSLSIF EMIK+RIS P
Sbjct: 379  RWNRPFRYRKNKRFDKAVRNEMSQYFFDICQSDGKERISFTYPPSLSIFLEMIKKRISPP 438

Query: 2886 TLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKK 3065
             +EKF  NELYNPWV+TNKQK K+ NNEFLNRI+ALD E+I LNILETRTRL NDD  K+
Sbjct: 439  IIEKFLFNELYNPWVYTNKQKEKNLNNEFLNRIKALDNENIYLNILETRTRLCNDDSTKE 498

Query: 3066 YLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQK 3245
            YLSK+YDP LN SYRK IYK+ SPS LKKTLIEN ++ FGINRIHGILL DTDYQ+FEQK
Sbjct: 499  YLSKKYDPLLNGSYRKTIYKSPSPSNLKKTLIENLLDPFGINRIHGILLPDTDYQEFEQK 558

Query: 3246 KNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYL--L 3419
             NRF++KS+STEIV+F TFISK V++S STN N   LSLFSEG+ID+++ TKY  YL  L
Sbjct: 559  INRFEQKSLSTEIVNFFTFISKFVKKSGSTNLNPSSLSLFSEGKIDFQKETKYFNYLLNL 618

Query: 3420 TKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAK 3599
             KIVTDANGQ               +PRWSYKLITDLEQQS EY+ED+P+DH+IRSR+ K
Sbjct: 619  NKIVTDANGQKMNRKSIRIKEIKKKLPRWSYKLITDLEQQSREYKEDIPIDHQIRSRRGK 678

Query: 3600 RVVIF---XXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVIL 3770
            RVVIF                        +AL+RY QQ+DFR G+IKGSMR+QRRK VI 
Sbjct: 679  RVVIFTATKQTTDPNTTNTKMSDKSQRKEVALMRYLQQADFRHGIIKGSMRAQRRKLVIF 738

Query: 3771 ELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXX 3950
            ELF+AN+HSPLFL+++QKS    FDISG  K  F+N + +GE F+IVEYT+ QT      
Sbjct: 739  ELFRANLHSPLFLERLQKS---PFDISGLRKLIFKNGLDKGEAFQIVEYTKEQTKRKEKK 795

Query: 3951 XXXXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQL 4130
                    ARI++AEAW  IP AQ IRGC+LLTQ I R+YILLPS IIAKN+GRI L QL
Sbjct: 796  EQNKSKEKARIKVAEAWKRIPFAQGIRGCVLLTQSIFRRYILLPSLIIAKNLGRIFLLQL 855

Query: 4131 PEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSS 4310
            PEWSEDFQEWN+E+++KCTYNG PLSETEFPKNWLTDGIQIKILFPFCLKP  KSK+ S 
Sbjct: 856  PEWSEDFQEWNKEIHIKCTYNGSPLSETEFPKNWLTDGIQIKILFPFCLKPSQKSKLRSF 915

Query: 4311 XXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVL 4490
                         FCFLTVWGMETELPF SPRK+PSFFKPI  EF          YFRVL
Sbjct: 916  QKDLMKKKKQKGDFCFLTVWGMETELPFCSPRKKPSFFKPILKEFEKKIGKFKKKYFRVL 975

Query: 4491 IIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXX 4670
             +FK KTKLLRKVSKETKKWV+KSV   K+IIKELS +NPILLFRLREV VY        
Sbjct: 976  TVFKGKTKLLRKVSKETKKWVLKSVFFRKRIIKELSNVNPILLFRLREVGVYESSKIKEE 1035

Query: 4671 XXXXXXNQIIHESFSQSE--SPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTP 4844
                  NQIIHESF+Q +  SP+WTN SLTE KMKDL DRTSTI NQIERI KEKKKVTP
Sbjct: 1036 KDSIINNQIIHESFNQMQIASPSWTNSSLTENKMKDLADRTSTIRNQIERITKEKKKVTP 1095

Query: 4845 RINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMN 5024
            RINNLSP  TS NAK+FE  ++LKR NA++ICKL  FLKFFIE+IYTDIFLS+INIPR+N
Sbjct: 1096 RINNLSP--TSSNAKKFENQEMLKRINAQLICKLSPFLKFFIEKIYTDIFLSIINIPRIN 1153

Query: 5025 TEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFY 5204
            TE  L+ TKKI+DKSIYNNERKQ+               S+IKK LDNISN K  S  FY
Sbjct: 1154 TELLLKLTKKIIDKSIYNNERKQE--RINKKKKTPIPFISSIKKPLDNISNIKATSEIFY 1211

Query: 5205 DLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKK 5384
            DLSYV QAYVFYKL++IQV+NS  LRSV++YQ IPFFLKP+IKDSFETQGM+ SK  D K
Sbjct: 1212 DLSYVPQAYVFYKLAKIQVTNS--LRSVVQYQGIPFFLKPKIKDSFETQGMLDSKSADNK 1269

Query: 5385 LPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQL 5564
            LP+YEMN WK+WLRGH QY LSQI WS+ +PEKWRNI  +  IAKK N SK HSYEK+ L
Sbjct: 1270 LPSYEMNPWKSWLRGHSQYHLSQIGWSKLIPEKWRNIFRQHRIAKKANFSKRHSYEKNPL 1329

Query: 5565 IDSK--KQFEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISY 5738
            ++SK  KQFEV  L NQK+NF KYYRYDLLSYKF++YE KTECFFY S FQGN N EI Y
Sbjct: 1330 MNSKKQKQFEVYSLFNQKDNFLKYYRYDLLSYKFLHYERKTECFFYGSSFQGNTNHEIYY 1389

Query: 5739 NTPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDT 5918
              PK+  F MLR+IPI N L  +   + EK  +RKYFDW+IL FD  QKVDIEAWI IDT
Sbjct: 1390 TIPKKKNFDMLRNIPIKNDLGKI---HTEKPVNRKYFDWEILKFDFIQKVDIEAWIRIDT 1446

Query: 5919 NRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWF 6098
            NRNQNT+IRT NSQ + KKD F L+IPEINLPNSHKGF DW+GMNEKMLK PISNLE WF
Sbjct: 1447 NRNQNTQIRTKNSQISYKKDFFDLKIPEINLPNSHKGFCDWMGMNEKMLKHPISNLELWF 1506

Query: 6099 FPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQ 6278
            FPEF LLY  YK KPWFIP                           G+FLIASNKKHRNQ
Sbjct: 1507 FPEFFLLYKTYKMKPWFIP------SKLLLLNLNRSENKKINEKEKGAFLIASNKKHRNQ 1560

Query: 6279 EEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLR 6458
            E+KEPTS G+  SVLSQQKDIEE+ ARS              T+AEL  FLKRYLLFQLR
Sbjct: 1561 EDKEPTSPGERRSVLSQQKDIEENYARS--NMKKEGKKQKQYTKAELHLFLKRYLLFQLR 1618

Query: 6459 WDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVL 6638
            WD TLNQRMI NI VYCLLL+L+D RKITISS+QK+EMSLDIM+I KNLTL+E MKKGV 
Sbjct: 1619 WDGTLNQRMIKNINVYCLLLKLIDLRKITISSIQKKEMSLDIMMINKNLTLSEFMKKGVF 1678

Query: 6639 IIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTG 6818
            I+EPIRL  +KDG+FIMYQTIGISLVHK+KH   QKYQEQ + S NN +E IS +QR+TG
Sbjct: 1679 ILEPIRLSEQKDGKFIMYQTIGISLVHKNKH---QKYQEQGHASNNNFNETISTHQRITG 1735

Query: 6819 NRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDN 6998
             R+KNRFDLLV EN+LSFR RRK RILIC NSKNRN I++N VF    NVKNSS+VSHDN
Sbjct: 1736 TRDKNRFDLLVTENLLSFRLRRKLRILICLNSKNRNSIEKNPVFW---NVKNSSQVSHDN 1792

Query: 6999 NHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKI 7163
            NHLDR++NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRF MLRIHLYPRLKI
Sbjct: 1793 NHLDRDKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFGMLRIHLYPRLKI 1847



 Score =  142 bits (359), Expect = 6e-30
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY P+  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPMHLALG 85


>gb|AMQ33448.1| hypothetical chloroplast RF19 (chloroplast) [Stenogyne kanehoana]
          Length = 1847

 Score = 2342 bits (6069), Expect = 0.0
 Identities = 1226/1795 (68%), Positives = 1365/1795 (76%), Gaps = 11/1795 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            N  IRSNKYLV EL NS ARI SILLFITCVYYLGRIPSP+F                  
Sbjct: 201  NVLIRSNKYLVSELTNSTARILSILLFITCVYYLGRIPSPLFTKKLKETSKTGAGERVES 260

Query: 2352 XXXXXXXX--ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFH 2525
                      ASEMKGTKQEQEG               ADPNKIDETEEI+VNGKE EFH
Sbjct: 261  EEERDVEIETASEMKGTKQEQEGSTEEDPSLYFFSEEGADPNKIDETEEIQVNGKEKEFH 320

Query: 2526 FRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSK 2705
            FRFTETGY+  PVSEESYLMN N+N DNSR +IFD+KTEN E      +KPL+ +LFDS 
Sbjct: 321  FRFTETGYQNGPVSEESYLMNFNDNQDNSRLQIFDQKTENKE--LIIFDKPLITILFDSN 378

Query: 2706 RWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLP 2885
            RWNRPFRY KN R D AV+NEMSQYFF+ICQSDGKERISFTYPPSLSIF EMIK+RIS P
Sbjct: 379  RWNRPFRYRKNKRFDKAVRNEMSQYFFDICQSDGKERISFTYPPSLSIFXEMIKKRISPP 438

Query: 2886 TLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKK 3065
             +EKF  NELYNPWV+TNKQK K+ NNEFLNRI+ALD E+I LNILETRTRL NDD  K+
Sbjct: 439  IIEKFLFNELYNPWVYTNKQKEKNLNNEFLNRIKALDNENIYLNILETRTRLCNDDSTKE 498

Query: 3066 YLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQK 3245
            YLSK+YDP LN SYRK IYK+ SPS LKKTLIEN ++ FGINRIHGILL DTDYQ+FEQK
Sbjct: 499  YLSKKYDPLLNGSYRKTIYKSPSPSNLKKTLIENLLDPFGINRIHGILLPDTDYQEFEQK 558

Query: 3246 KNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYL--L 3419
             NRF++KS+STEIV+F TFISK V++S STN N   LSLFSEG+ID+++ TKY  YL  L
Sbjct: 559  INRFEQKSLSTEIVNFFTFISKFVKKSGSTNLNPSSLSLFSEGKIDFQKETKYFNYLLNL 618

Query: 3420 TKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAK 3599
             KIVTDANGQ               +PRWSYKLITDLEQQS EY+ED+P+DH+IRSR+ K
Sbjct: 619  NKIVTDANGQKMNRKSIRIKEIKKKLPRWSYKLITDLEQQSREYKEDIPIDHQIRSRRGK 678

Query: 3600 RVVIF---XXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVIL 3770
            RVVIF                        +AL+RY QQ+DFR G+IKGSMR+QRRK VI 
Sbjct: 679  RVVIFTATKQTTDPNTTNTKMSDKSQRKEVALMRYLQQADFRHGIIKGSMRAQRRKLVIF 738

Query: 3771 ELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXX 3950
            ELF+AN HSPLFL+++QKS    FDISG  K  F+N + +GE F+IVEYT+ QT      
Sbjct: 739  ELFRANPHSPLFLERLQKS---PFDISGLRKLIFKNGLDKGEAFQIVEYTKEQTKRKEKK 795

Query: 3951 XXXXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQL 4130
                    ARI++AEAW  IP AQ IRGC+LLTQ I R+YILLPS IIAKN+GRI L QL
Sbjct: 796  EQNKSKEKARIKVAEAWKRIPFAQGIRGCVLLTQSIFRRYILLPSLIIAKNLGRIFLLQL 855

Query: 4131 PEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSS 4310
            PEWSEDFQEWN+E+++KCTYNG PLSETEFPKNWLTDGIQIKILFPFCLKP  KSK+ S 
Sbjct: 856  PEWSEDFQEWNKEIHIKCTYNGSPLSETEFPKNWLTDGIQIKILFPFCLKPSQKSKLRSF 915

Query: 4311 XXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVL 4490
                         FCFLTVWGMETELPF SPRK+PSFFKPI  EF          YFRVL
Sbjct: 916  QKDLMKKKKQKGDFCFLTVWGMETELPFCSPRKKPSFFKPILKEFEKKIGKLKKKYFRVL 975

Query: 4491 IIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXX 4670
             +FK KTKLLRKVSKETKKWV+KSV   K+IIKELS +NPILLFRLREV VY        
Sbjct: 976  TVFKGKTKLLRKVSKETKKWVLKSVFFRKRIIKELSNVNPILLFRLREVGVYESSKIKEE 1035

Query: 4671 XXXXXXNQIIHESFSQSE--SPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTP 4844
                  NQIIHESF+Q +  SP+WTN SLTE KMKDL DRTSTI NQIERI KEKKKVTP
Sbjct: 1036 KDSIINNQIIHESFNQMQIASPSWTNSSLTENKMKDLADRTSTIRNQIERITKEKKKVTP 1095

Query: 4845 RINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMN 5024
            RINNLSP  TS NAK+FE  ++LKR NA++ICKL  FLKFFIE+IYTDIFLS+INIPR+N
Sbjct: 1096 RINNLSP--TSSNAKKFENQEMLKRINAQLICKLSPFLKFFIEKIYTDIFLSIINIPRIN 1153

Query: 5025 TEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFY 5204
            TE  L+ TKKI+DKSIYNNERKQ+               S+IKK LDNISN K  S  FY
Sbjct: 1154 TELLLKLTKKIIDKSIYNNERKQE--RINKKKKTPIPFISSIKKPLDNISNIKATSEIFY 1211

Query: 5205 DLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKK 5384
            DLSYV QAYVFYKL++IQV+NS  LRSV++YQ IPFFLKP+IKDSFETQGM+ SK  D K
Sbjct: 1212 DLSYVPQAYVFYKLAKIQVTNS--LRSVVQYQGIPFFLKPKIKDSFETQGMLDSKSADNK 1269

Query: 5385 LPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQL 5564
            LP+YEMN WK+WLRGH QY LSQI WS+ +PEKWRNI  +  IAKK N SK HSYEK+ L
Sbjct: 1270 LPSYEMNPWKSWLRGHSQYHLSQIGWSKLIPEKWRNIFRQHRIAKKANFSKRHSYEKNPL 1329

Query: 5565 IDSK--KQFEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISY 5738
            ++SK  KQFEV  L NQK+NF KYYRYDLLSYKF++YE KTECFFY S FQGN N EI Y
Sbjct: 1330 MNSKKQKQFEVYSLFNQKDNFLKYYRYDLLSYKFLHYERKTECFFYGSSFQGNTNHEIYY 1389

Query: 5739 NTPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDT 5918
              PK+  F MLR+IPI N L  +   + EK  +RKYFDW+IL FD  QKVDIEAWI IDT
Sbjct: 1390 TIPKKKNFDMLRNIPIKNDLGKI---HTEKPVNRKYFDWEILKFDFIQKVDIEAWIRIDT 1446

Query: 5919 NRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWF 6098
            NRNQNT+IRT NSQ + KKD F L+IPEINLPNSHKGF DW+GMNEKMLK PISNLE WF
Sbjct: 1447 NRNQNTQIRTKNSQISYKKDFFDLKIPEINLPNSHKGFCDWMGMNEKMLKHPISNLELWF 1506

Query: 6099 FPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQ 6278
            FPEF LLY  YK KPWFIP                           G+FLIASNKKHRNQ
Sbjct: 1507 FPEFFLLYKTYKMKPWFIP------SKLLLLNLNRSENKKINEKEKGAFLIASNKKHRNQ 1560

Query: 6279 EEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLR 6458
            E+KEPTS G+  SVLSQQKDIEE+ ARS              T+AEL  FLKRYLLFQLR
Sbjct: 1561 EDKEPTSPGERRSVLSQQKDIEENYARS---NMKKGKKQKQYTKAELHLFLKRYLLFQLR 1617

Query: 6459 WDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVL 6638
            WD TLNQRMI NI VYCLLL+L+D RKITISS+QK+EMSLDIM+I KNLTL+E MKKGV 
Sbjct: 1618 WDGTLNQRMIKNINVYCLLLKLIDLRKITISSIQKKEMSLDIMMINKNLTLSEFMKKGVF 1677

Query: 6639 IIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTG 6818
            I+EPIRL  +KDG+FIMYQTIGISLVHK+KH   QKYQEQ + S NN +E IS +QR+TG
Sbjct: 1678 ILEPIRLSEQKDGKFIMYQTIGISLVHKNKH---QKYQEQGHASNNNFNETISTHQRITG 1734

Query: 6819 NRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDN 6998
             R+KNRFDLLV EN+LSFR RRK RILIC NSKNRN I++N VF    NVKNSS+VSHDN
Sbjct: 1735 TRDKNRFDLLVTENLLSFRLRRKLRILICLNSKNRNSIEKNPVFW---NVKNSSQVSHDN 1791

Query: 6999 NHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKI 7163
            NHLDR++NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRF MLRIHLYPRLKI
Sbjct: 1792 NHLDRDKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFGMLRIHLYPRLKI 1846



 Score =  142 bits (359), Expect = 6e-30
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY P+  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPMHLALG 85


>ref|YP_009239241.1| ycf1 (chloroplast) [Pedicularis ishidoyana]
            gi|1011056419|ref|YP_009239250.1| ycf1 (chloroplast)
            [Pedicularis ishidoyana] gi|1001185273|gb|AML80475.1|
            ycf1 (chloroplast) [Pedicularis ishidoyana]
            gi|1001185274|gb|AML80476.1| ycf1 (chloroplast)
            [Pedicularis ishidoyana]
          Length = 1817

 Score = 2341 bits (6067), Expect = 0.0
 Identities = 1242/1800 (69%), Positives = 1358/1800 (75%), Gaps = 14/1800 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQCVFLNNLIFQLFN
Sbjct: 82   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 141

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+A+LVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQN+SIRS
Sbjct: 142  HFILPSSMLAKLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNNSIRS 201

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            NKYIRSNKYLV EL NSMARIFSILLFITCVYYLGRIPSPIF                  
Sbjct: 202  NKYIRSNKYLVSELINSMARIFSILLFITCVYYLGRIPSPIFTKKLKETPKTEQRVESEE 261

Query: 2352 XXXXXXXXASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFR 2531
                    ASEMKGTKQEQEG              +ADPNKIDETEEIRVN KEDE H R
Sbjct: 262  ERDVEIETASEMKGTKQEQEGSIEEDLPPSFFSEERADPNKIDETEEIRVNRKEDEVHSR 321

Query: 2532 FTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSKRW 2711
            F E                                  N +P     EKPLVNLLFDSKRW
Sbjct: 322  FLE----------------------------------NRDPFFK--EKPLVNLLFDSKRW 345

Query: 2712 NRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLPTL 2891
            NRPFRYIKNT   G V+NEMSQYFF+IC+SDGKERISFTYPPSLSIF EMIKRRIS PT 
Sbjct: 346  NRPFRYIKNTDFGGTVRNEMSQYFFDICKSDGKERISFTYPPSLSIFLEMIKRRISPPTF 405

Query: 2892 EKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKKYL 3071
            EK + N+L   W++TNKQ  KSFNNEFLNRIEALD E ISLNILETRTRL NDDY K+YL
Sbjct: 406  EKSSPNKL---WLYTNKQHVKSFNNEFLNRIEALDNEFISLNILETRTRLCNDDYTKEYL 462

Query: 3072 SKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQKKN 3251
            SKRYDPFLN+SYRK IYKN S   LK+TLI+NFI KFG+NRIHGILLSDTDYQ F+ + N
Sbjct: 463  SKRYDPFLNKSYRKTIYKNFSSPNLKQTLIKNFIHKFGMNRIHGILLSDTDYQAFKPQIN 522

Query: 3252 RFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYLLTKIV 3431
            RFDKK++STEIVDFLTF+S+V RES   + N K LSLFSEGRI     TKYLKYLLT+IV
Sbjct: 523  RFDKKTLSTEIVDFLTFMSRVFRES---DVNCKVLSLFSEGRIV----TKYLKYLLTQIV 575

Query: 3432 TDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAKRVVI 3611
            TD N Q                 R SY+LIT+LEQQSGEYQEDVPVDHEIRSRK K VVI
Sbjct: 576  TDVNDQKIIRKSTRIKEISKKALRRSYQLITELEQQSGEYQEDVPVDHEIRSRKGKNVVI 635

Query: 3612 FXXXXXXXXXXXXXXXXXXXXX--IALIRYSQQSDFRRGLIKGSMRSQRRKTVILELFQA 3785
            F                       ++LIRYSQQSDFRRG+IKGS+RSQRRK VI+ELFQA
Sbjct: 636  FTVNKEDTDPNTDTNTFDQTDTGEVSLIRYSQQSDFRRGIIKGSVRSQRRKIVIIELFQA 695

Query: 3786 NVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXXXXXXX 3965
            NVHSPLF D+IQK +L S DISG IK  FRN    GE FKI+EYT+ QT           
Sbjct: 696  NVHSPLFFDRIQKKNLSSLDISGLIKLIFRNR--GGEAFKILEYTKKQTKREEKKEKNKR 753

Query: 3966 XXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQLPEWSE 4145
                R+EIAEAWDTIP AQ+IRGCMLLTQ   RKYI LPS IIAKNIGRILLFQLPEWS 
Sbjct: 754  KEDTRVEIAEAWDTIPLAQIIRGCMLLTQSFFRKYIRLPSFIIAKNIGRILLFQLPEWSA 813

Query: 4146 DFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSSXXXXX 4325
            DF EW+RE++VKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKP    K+GSS     
Sbjct: 814  DFHEWDREVHVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKP---RKLGSSQKDLK 870

Query: 4326 XXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVLIIFKR 4505
                    FCFLT+WGMETELPFG PRK+ SFFKPIF EF          YF VL++FK 
Sbjct: 871  KKPKDY--FCFLTIWGMETELPFGPPRKQLSFFKPIFAEFKNKIGKFKKKYFGVLLVFKG 928

Query: 4506 KTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXXXXXXX 4685
            KTKLL K+SKE KKWVIKSV+L K  IKE+SK+NPILLFR +EVE+Y             
Sbjct: 929  KTKLLGKLSKEAKKWVIKSVLLIKTKIKEISKVNPILLFRFKEVEIYESREFKEEKDSLI 988

Query: 4686 XNQIIHESFSQSESPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTPRINNLSP 4865
             NQIIHES  Q  SP+W N S TEKKMKDL DRTSTI NQIE+I KEKKKVTPRINNLS 
Sbjct: 989  SNQIIHESPIQIASPSWRNSSFTEKKMKDLADRTSTILNQIEKISKEKKKVTPRINNLSS 1048

Query: 4866 -NKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMNTEFFLE 5042
             NKT+YNA RFEKWQILKRRNARIICK P FLKFFIERIYTDIFLS INIP++N + FLE
Sbjct: 1049 ANKTNYNANRFEKWQILKRRNARIICKFPLFLKFFIERIYTDIFLSSINIPKINKKLFLE 1108

Query: 5043 STKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFYDLSYVS 5222
              KK+ DK IYNN RKQ+                 I KSLDNISN KTN H+FY LS +S
Sbjct: 1109 LIKKMSDKFIYNNSRKQEIINKKNKNPIPF-----ISKSLDNISNIKTNPHSFYHLSDIS 1163

Query: 5223 QAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKKLPNYEM 5402
            QAYVFYKLSQIQVSNSYKLR VL YQ IPFF KPEIKDSFETQG+V SKLG+KKLP+YEM
Sbjct: 1164 QAYVFYKLSQIQVSNSYKLRYVLHYQGIPFFPKPEIKDSFETQGVVHSKLGNKKLPSYEM 1223

Query: 5403 NQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQLIDSKKQ 5582
            NQWKNWLRGHYQY+LSQI+WSR +PEKWRN +H+RHIAKKE +SKW   EKD LIDSKKQ
Sbjct: 1224 NQWKNWLRGHYQYNLSQIKWSRLIPEKWRNTLHKRHIAKKEIVSKWD--EKDHLIDSKKQ 1281

Query: 5583 FEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISYNTPKETFF 5762
            FEV  LSNQKENFQK YRYDLLSYKFI+YE KTECFFYRSPFQGNKNQEISY T K T  
Sbjct: 1282 FEVYSLSNQKENFQKDYRYDLLSYKFIDYENKTECFFYRSPFQGNKNQEISY-TSKGTLL 1340

Query: 5763 SMLRSIP--INNYLEGVDILYM---------EKMADRKYFDWKILNFDLRQKVDIEAWIM 5909
             + R+IP  +N  L  VD LYM         EKMADRKYFDWK +NFDL+QKV+IEA  +
Sbjct: 1341 DISRNIPNYLNYNLGRVDTLYMDMENIYMDMEKMADRKYFDWKSINFDLKQKVNIEACTV 1400

Query: 5910 IDTNRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLE 6089
            I+TN NQN +I TNNS K   KDL YL+IP+ N PNSHKGFFDW+GMNEK+LK+PI NLE
Sbjct: 1401 INTNSNQNVQIITNNSPK---KDLSYLKIPKKNPPNSHKGFFDWMGMNEKILKQPIPNLE 1457

Query: 6090 HWFFPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKH 6269
             WFFPEFVLLY+AYK KPWFIP                           GSFLIA+ KK+
Sbjct: 1458 SWFFPEFVLLYSAYKMKPWFIPSKLLLLNLNRNENQNCSKNKKINEKEKGSFLIAAKKKY 1517

Query: 6270 RNQEEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLF 6449
             NQ EKEP SRG LGSVLSQ KDIEE+  +S              T+AELD FLKRYLLF
Sbjct: 1518 PNQNEKEPISRGGLGSVLSQPKDIEENYVKSDMKKGKKKKQYKNKTKAELDLFLKRYLLF 1577

Query: 6450 QLRWDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKK 6629
            QLRWDDTLNQRMINNIKVYCLLLRLV+PRKITISS+++RE+ LDIMLIQKNLTLTELMK+
Sbjct: 1578 QLRWDDTLNQRMINNIKVYCLLLRLVNPRKITISSIRRREICLDIMLIQKNLTLTELMKR 1637

Query: 6630 GVLIIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQR 6809
            G+LIIEP RL GKKDGQFIMYQTIGISL+HKSKHQTNQKYQ+Q Y  + +  EAIS  QR
Sbjct: 1638 GILIIEPARLSGKKDGQFIMYQTIGISLIHKSKHQTNQKYQKQGYDPQTHFGEAISTQQR 1697

Query: 6810 LTGNRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVS 6989
            +T NR++N FDLLVPENILSF+ R+K RILICFNSKNRN+IDRN VF NEKN+KNS++VS
Sbjct: 1698 ITENRDQNSFDLLVPENILSFKRRKKLRILICFNSKNRNNIDRNPVFWNEKNLKNSTQVS 1757

Query: 6990 HDNNHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKICG 7169
            HDN HLD+E+NQLMK KLFLWPNYRLEDLACMNRYWF+TNNGSRFSMLRI +YPRLKICG
Sbjct: 1758 HDNKHLDKEKNQLMKLKLFLWPNYRLEDLACMNRYWFNTNNGSRFSMLRIQMYPRLKICG 1817



 Score =  142 bits (358), Expect = 7e-30
 Identities = 70/86 (81%), Positives = 78/86 (90%)
 Frame = +2

Query: 1568 VMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVS 1747
            +MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VME+GTEKKVS
Sbjct: 1    MMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEKGTEKKVS 60

Query: 1748 AISGFITGQFMMFVSIYYVPLASSIG 1825
            A +GFITGQ MMF+SIYY PL  ++G
Sbjct: 61   ATTGFITGQLMMFISIYYAPLHLALG 86


>gb|AMQ33096.1| hypothetical chloroplast RF19 (chloroplast) [Stenogyne bifida]
          Length = 1847

 Score = 2338 bits (6058), Expect = 0.0
 Identities = 1224/1795 (68%), Positives = 1364/1795 (75%), Gaps = 11/1795 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            N  IRSNKYLV EL NS ARI SILLFITCVYYLGRIPSP+F                  
Sbjct: 201  NVLIRSNKYLVSELTNSTARILSILLFITCVYYLGRIPSPLFTKKLKETSKTGAGERVES 260

Query: 2352 XXXXXXXX--ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFH 2525
                      ASEMKGTKQEQEG               ADPNKIDETEEI+VNGKE EFH
Sbjct: 261  EEERDVEIETASEMKGTKQEQEGSTEEDPSLYFFSEEGADPNKIDETEEIQVNGKEKEFH 320

Query: 2526 FRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSK 2705
            FRFTETGY+  PVSEESYLMN N+N DNSR +IFD+KTEN E      +KPL+ +LFDS 
Sbjct: 321  FRFTETGYQNGPVSEESYLMNFNDNQDNSRLQIFDQKTENKE--LIIFDKPLITILFDSN 378

Query: 2706 RWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLP 2885
            RWNRPFRY KN R D AV+NEMSQYFF+ICQSDGKERISFTYPPSLSIF EMIK+RIS P
Sbjct: 379  RWNRPFRYRKNKRFDKAVRNEMSQYFFDICQSDGKERISFTYPPSLSIFLEMIKKRISPP 438

Query: 2886 TLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKK 3065
             +EKF  NELYNPWV+TNKQK K+ NNEFLNRI+ALD E+I LNILETRTRL NDD  K+
Sbjct: 439  IIEKFLFNELYNPWVYTNKQKEKNLNNEFLNRIKALDNENIYLNILETRTRLCNDDSTKE 498

Query: 3066 YLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQK 3245
            YLSK+YDP LN SYRK IYK+ SPS LKKTLIEN ++ FGINRIHGILL DTDYQ+FEQK
Sbjct: 499  YLSKKYDPLLNGSYRKTIYKSPSPSNLKKTLIENLLDPFGINRIHGILLPDTDYQEFEQK 558

Query: 3246 KNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYL--L 3419
             NRF++KS+STEIV+F TFISK V++S STN N   LSLFSEG+ID+++ TKY  YL  L
Sbjct: 559  INRFEQKSLSTEIVNFFTFISKFVKKSGSTNLNPSSLSLFSEGKIDFQKETKYFNYLLNL 618

Query: 3420 TKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAK 3599
             KIVTDANGQ               +PRWSYKLITDLEQQS EY+ED+P+DH+IRSR+ K
Sbjct: 619  NKIVTDANGQKMNRKSIRIKEIKKKLPRWSYKLITDLEQQSREYKEDIPIDHQIRSRRGK 678

Query: 3600 RVVIF---XXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVIL 3770
            RVVIF                        +AL+RY QQ+DFR G+IKGSMR+QRRK VI 
Sbjct: 679  RVVIFTATKQTTDPNTTNTKMSDKSQRKEVALMRYLQQADFRHGIIKGSMRAQRRKLVIF 738

Query: 3771 ELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXX 3950
            ELF+AN HSPLFL+++QKS    FDISG  K  F+N + +GE F+IVEYT+ QT      
Sbjct: 739  ELFRANPHSPLFLERLQKS---PFDISGLRKLIFKNGLDKGEAFQIVEYTKEQTKRKEKK 795

Query: 3951 XXXXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQL 4130
                    ARI++AEAW  IP AQ IRGC+LLTQ I R+YILLPS IIAKN+GRI L QL
Sbjct: 796  EQNKSKEKARIKVAEAWKRIPFAQGIRGCVLLTQSIFRRYILLPSLIIAKNLGRIFLLQL 855

Query: 4131 PEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSS 4310
            PEWSEDFQEWN+E+++KCTYNG PLSE+EFPKNWLTDGIQIKILFPFCLKP  KSK+ S 
Sbjct: 856  PEWSEDFQEWNKEIHIKCTYNGSPLSESEFPKNWLTDGIQIKILFPFCLKPSQKSKLRSF 915

Query: 4311 XXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVL 4490
                         FCFLTVWGMETELPF SPRK+PSFFKPI  EF          YFRVL
Sbjct: 916  QKDLMKKKKQKGDFCFLTVWGMETELPFCSPRKKPSFFKPILKEFEKKIGKLKKKYFRVL 975

Query: 4491 IIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXX 4670
             +FK KTKLLRKVSKETKKWV+KSV   K+IIKELS +NPILLFRLREV VY        
Sbjct: 976  TVFKGKTKLLRKVSKETKKWVLKSVFFRKRIIKELSNVNPILLFRLREVGVYESSKIKEE 1035

Query: 4671 XXXXXXNQIIHESFSQSE--SPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTP 4844
                  NQIIHESF+Q +  SP+WTN SLTE KMKDL DRTSTI NQIERI KEKKKVT 
Sbjct: 1036 KDSIINNQIIHESFNQMQIASPSWTNSSLTENKMKDLADRTSTIRNQIERITKEKKKVTS 1095

Query: 4845 RINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMN 5024
            RINNLSP  TS NAK+FE  ++LKR NA++ICKL  FLKFFIE+IYTDIFLS+INIPR+N
Sbjct: 1096 RINNLSP--TSSNAKKFENQEMLKRINAQLICKLSPFLKFFIEKIYTDIFLSIINIPRIN 1153

Query: 5025 TEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFY 5204
            TE  L+ TKKI+DKSIYNNERKQ+               S+IKK LDNISN K  S  FY
Sbjct: 1154 TELLLKLTKKIIDKSIYNNERKQE--RINKKKKTPIPFISSIKKPLDNISNIKATSEIFY 1211

Query: 5205 DLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKK 5384
            DLSYV QAYVFYKL++IQV+NS  LRSV++YQ IPFFLKP+IKDSFETQGM+ SK  D K
Sbjct: 1212 DLSYVPQAYVFYKLAKIQVTNS--LRSVVQYQGIPFFLKPKIKDSFETQGMLDSKSADNK 1269

Query: 5385 LPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQL 5564
            LP+YEMN WK+WLRGH QY LSQI WS+ +PEKWRNI  +  IAKK N SK HSYEK+ L
Sbjct: 1270 LPSYEMNPWKSWLRGHSQYHLSQIGWSKLIPEKWRNIFRQHRIAKKANFSKRHSYEKNPL 1329

Query: 5565 IDSK--KQFEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISY 5738
            ++SK  KQFEV  L NQK+NF KYYRYDLLSYKF++YE KTECFFY S FQGN N EI Y
Sbjct: 1330 MNSKKQKQFEVYSLFNQKDNFLKYYRYDLLSYKFLHYERKTECFFYGSSFQGNTNHEIYY 1389

Query: 5739 NTPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDT 5918
              PK+  F MLR+IPI N L  +   + EK  +RKYFDW+IL FD  QKVDIEAWI IDT
Sbjct: 1390 TIPKKKNFDMLRNIPIKNDLGKI---HTEKPVNRKYFDWEILKFDFIQKVDIEAWIRIDT 1446

Query: 5919 NRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWF 6098
            NRNQNT+IRT NSQ + KKD F L+IPEINLPNSHKGF DW+GMNEKMLK PISNLE WF
Sbjct: 1447 NRNQNTQIRTKNSQISYKKDFFDLKIPEINLPNSHKGFCDWMGMNEKMLKHPISNLELWF 1506

Query: 6099 FPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQ 6278
            FPEF LLY  YK KPWFIP                           G+FLIASNKKHRNQ
Sbjct: 1507 FPEFFLLYKTYKMKPWFIP------SKLLLLNLNRSENKKINEKEKGAFLIASNKKHRNQ 1560

Query: 6279 EEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLR 6458
            E+KEPTS G+  SVLSQQKDIEE+ ARS              T+AEL  FLKRYLLFQLR
Sbjct: 1561 EDKEPTSPGERRSVLSQQKDIEENYARS---NMKKGKKQKQYTKAELHLFLKRYLLFQLR 1617

Query: 6459 WDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVL 6638
            WD TLNQRMI NI VYCLLL+L+D RKITISS+QK+EMSLDIM+I KNLTL+E MKKGV 
Sbjct: 1618 WDGTLNQRMIKNINVYCLLLKLIDLRKITISSIQKKEMSLDIMMINKNLTLSEFMKKGVF 1677

Query: 6639 IIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTG 6818
            I+EPIRL  +KDG+FIMYQTIGISLVHK+KH   QKYQEQ + S NN +E IS +QR+TG
Sbjct: 1678 ILEPIRLSEQKDGKFIMYQTIGISLVHKNKH---QKYQEQGHASNNNFNETISTHQRITG 1734

Query: 6819 NRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDN 6998
             R+KNRFDLLV EN+LSFR RRK RILIC NSKNRN I++N VF    NVKNSS+VSHDN
Sbjct: 1735 TRDKNRFDLLVTENLLSFRLRRKLRILICLNSKNRNSIEKNPVFW---NVKNSSQVSHDN 1791

Query: 6999 NHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKI 7163
            NHLDR++NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRF MLRIHLYPRLKI
Sbjct: 1792 NHLDRDKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFGMLRIHLYPRLKI 1846



 Score =  142 bits (359), Expect = 6e-30
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY P+  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPMHLALG 85


>gb|AMQ33184.1| hypothetical chloroplast RF19 (chloroplast) [Haplostachys
            haplostachya]
          Length = 1847

 Score = 2336 bits (6053), Expect = 0.0
 Identities = 1223/1795 (68%), Positives = 1363/1795 (75%), Gaps = 11/1795 (0%)
 Frame = +3

Query: 1812 HLALGRPHTITVLALPYLLXXXXXXXXXXXXDYGSTTRNSMRNFSIQCVFLNNLIFQLFN 1991
            HLALGRPHTITVLALPYLL            DYGSTTRNSMRNFSIQC+FLNNLIFQLFN
Sbjct: 81   HLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFN 140

Query: 1992 HFILPSSMVARLVNIYMFRCNNKMLFVTSSFVGWLIGHIFFMKWLGLVLVWIRQNHSIRS 2171
            HFILPSSM+ARLVNIYMFRCNNKMLFVTSSFVGWLIGHI FMKWLGLVLVWIRQNHSIRS
Sbjct: 141  HFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWLGLVLVWIRQNHSIRS 200

Query: 2172 NKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSPIFXXXXXXXXXXXXXXXXXX 2351
            N  IRSNKYLV EL NS ARI SILLFITCVYYLGRIPSP+F                  
Sbjct: 201  NVLIRSNKYLVSELTNSTARILSILLFITCVYYLGRIPSPLFTKKLKETSKTGAGERVES 260

Query: 2352 XXXXXXXX--ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFH 2525
                      ASEMKGTKQEQEG               ADPNKIDETEEI+VNGKE EFH
Sbjct: 261  EEERDVEIETASEMKGTKQEQEGSTEEDPSLYFFSEEGADPNKIDETEEIQVNGKEKEFH 320

Query: 2526 FRFTETGYKKRPVSEESYLMNVNENYDNSRFKIFDKKTENNEPXXXXXEKPLVNLLFDSK 2705
            FRFTETGY+  PVSEESYLMN N+N DNSR +IFD+KTEN E      +KPL+ +LFDS 
Sbjct: 321  FRFTETGYQNGPVSEESYLMNFNDNQDNSRLQIFDQKTENKE--LIIFDKPLITILFDSN 378

Query: 2706 RWNRPFRYIKNTRIDGAVKNEMSQYFFNICQSDGKERISFTYPPSLSIFFEMIKRRISLP 2885
            RWNRPFRY KN R D  V+NEMSQYFF+ICQSDGKERISFTYPPSLSIF EMIK+RIS P
Sbjct: 379  RWNRPFRYRKNKRFDKTVRNEMSQYFFDICQSDGKERISFTYPPSLSIFLEMIKKRISPP 438

Query: 2886 TLEKFASNELYNPWVFTNKQKGKSFNNEFLNRIEALDKESISLNILETRTRLYNDDYPKK 3065
             +EKF  NELYNPWV+TNKQK K+ NNEFLNRI+ALD E+I LNILETRTRL NDD  K+
Sbjct: 439  IIEKFLFNELYNPWVYTNKQKEKNLNNEFLNRIKALDNENIYLNILETRTRLCNDDSTKE 498

Query: 3066 YLSKRYDPFLNRSYRKIIYKNLSPSILKKTLIENFIEKFGINRIHGILLSDTDYQKFEQK 3245
            YLSK+YDP LN SYRK IYK+ SPS LKKTLIEN ++ FGINRIHGILL DTDYQ+FEQK
Sbjct: 499  YLSKKYDPLLNGSYRKTIYKSPSPSNLKKTLIENLLDPFGINRIHGILLPDTDYQEFEQK 558

Query: 3246 KNRFDKKSISTEIVDFLTFISKVVRESRSTNQNWKGLSLFSEGRIDYERRTKYLKYL--L 3419
             NRF++KS+STEIV+F TFISK V++S STN N   LSLFSEG+ID+++ TKY  YL  L
Sbjct: 559  INRFEQKSLSTEIVNFFTFISKFVKKSGSTNLNPSSLSLFSEGKIDFQKETKYFNYLLNL 618

Query: 3420 TKIVTDANGQXXXXXXXXXXXXXXXVPRWSYKLITDLEQQSGEYQEDVPVDHEIRSRKAK 3599
             KIVTDANGQ               +PRWSYKLITDLEQQS EY+ED+P+DH+IRSR+ K
Sbjct: 619  NKIVTDANGQKMNRKSIRIKEIKKKLPRWSYKLITDLEQQSREYKEDIPIDHQIRSRRGK 678

Query: 3600 RVVIF---XXXXXXXXXXXXXXXXXXXXXIALIRYSQQSDFRRGLIKGSMRSQRRKTVIL 3770
            RVVIF                        +AL+RY QQ+DFR G+IKGSMR+QRRK VI 
Sbjct: 679  RVVIFTATKQTTDPNTTNTKMSDKSQRKEVALMRYLQQADFRHGIIKGSMRAQRRKLVIF 738

Query: 3771 ELFQANVHSPLFLDKIQKSSLFSFDISGFIKRNFRNWMWRGEGFKIVEYTENQTXXXXXX 3950
            ELF+AN HSPLFL+++QKS    FDISG  K  F+N + +GE F+IVEYT+ QT      
Sbjct: 739  ELFRANPHSPLFLERLQKS---PFDISGLRKLIFKNRLDKGEAFQIVEYTKEQTKRKEKK 795

Query: 3951 XXXXXXXXARIEIAEAWDTIPCAQVIRGCMLLTQCILRKYILLPSCIIAKNIGRILLFQL 4130
                    ARI++AEAW  IP AQ IRGC+LLTQ I R+YILLPS IIAKN+GRI L QL
Sbjct: 796  EQNKSKEKARIKVAEAWKRIPFAQGIRGCVLLTQSIFRRYILLPSLIIAKNLGRIFLLQL 855

Query: 4131 PEWSEDFQEWNREMYVKCTYNGVPLSETEFPKNWLTDGIQIKILFPFCLKPWDKSKVGSS 4310
            PEWSEDFQEWN+E+++KCTYNG PLSETEFPKNWLTDGIQIKILFPFCLKP  KSK+ S 
Sbjct: 856  PEWSEDFQEWNKEIHIKCTYNGSPLSETEFPKNWLTDGIQIKILFPFCLKPSQKSKLRSF 915

Query: 4311 XXXXXXXXXXXXXFCFLTVWGMETELPFGSPRKRPSFFKPIFNEFXXXXXXXXXXYFRVL 4490
                         FCFLTVWGMETELPF SPRK+PSFFKPI  EF          YFRVL
Sbjct: 916  QKDLMKKKKQKGDFCFLTVWGMETELPFCSPRKKPSFFKPILKEFEKKIGKLKKKYFRVL 975

Query: 4491 IIFKRKTKLLRKVSKETKKWVIKSVILTKKIIKELSKINPILLFRLREVEVYXXXXXXXX 4670
             +FK KTKLLRKVSKETKKWV+KSV   K+IIKELS +NPILLFRLREV VY        
Sbjct: 976  TVFKGKTKLLRKVSKETKKWVLKSVFFRKRIIKELSNVNPILLFRLREVGVYESSKIKEE 1035

Query: 4671 XXXXXXNQIIHESFSQSE--SPNWTNFSLTEKKMKDLTDRTSTIENQIERIKKEKKKVTP 4844
                  NQIIHESF+Q +  SP+WTN SLTE KMKDL DRTSTI NQIERI KEKKKVTP
Sbjct: 1036 KDSIINNQIIHESFNQMQIASPSWTNSSLTENKMKDLADRTSTIRNQIERITKEKKKVTP 1095

Query: 4845 RINNLSPNKTSYNAKRFEKWQILKRRNARIICKLPFFLKFFIERIYTDIFLSLINIPRMN 5024
            RINNLSP  TS NAK+FE  ++LKR NA++ICKL  FLKFFIE+IYTDIFLS+INIPR+N
Sbjct: 1096 RINNLSP--TSSNAKKFENQEMLKRINAQLICKLSPFLKFFIEKIYTDIFLSIINIPRIN 1153

Query: 5025 TEFFLESTKKILDKSIYNNERKQDXXXXXXXXXXXXXXXSTIKKSLDNISNSKTNSHTFY 5204
            TE  L+ TKKI+DKSIYNNERKQ+               S+IKK LDNISN K  S  FY
Sbjct: 1154 TELLLKLTKKIIDKSIYNNERKQE--RINKKKKTPIPFISSIKKPLDNISNIKATSEIFY 1211

Query: 5205 DLSYVSQAYVFYKLSQIQVSNSYKLRSVLKYQEIPFFLKPEIKDSFETQGMVRSKLGDKK 5384
            DLSYV QAYVFYKL++IQV+NS  LRSV++YQ IPFFLKP+IKDSFETQGM+ SK  D K
Sbjct: 1212 DLSYVPQAYVFYKLAKIQVTNS--LRSVVQYQGIPFFLKPKIKDSFETQGMLDSKSADNK 1269

Query: 5385 LPNYEMNQWKNWLRGHYQYDLSQIRWSRFLPEKWRNIVHRRHIAKKENLSKWHSYEKDQL 5564
            LP+YEMN WK+WLRGH QY LSQI WS+ +PEKWRNI  +  IAK  N SK HSYEK+ L
Sbjct: 1270 LPSYEMNPWKSWLRGHSQYHLSQIGWSKLIPEKWRNIFRQHRIAKXANFSKRHSYEKNPL 1329

Query: 5565 IDSK--KQFEVDLLSNQKENFQKYYRYDLLSYKFINYETKTECFFYRSPFQGNKNQEISY 5738
            ++SK  KQFEV  L NQK+NF KYYRYDLLSYKF++YE KTECFFY S FQGN N EI Y
Sbjct: 1330 MNSKKQKQFEVYSLFNQKDNFLKYYRYDLLSYKFLHYERKTECFFYGSSFQGNTNHEIYY 1389

Query: 5739 NTPKETFFSMLRSIPINNYLEGVDILYMEKMADRKYFDWKILNFDLRQKVDIEAWIMIDT 5918
              PK+  F MLR+IPI N L  +   + EK  +RKYFDW+IL FD  QKVDIEAWI IDT
Sbjct: 1390 TIPKKKNFDMLRNIPIKNDLGKI---HTEKPVNRKYFDWEILKFDFIQKVDIEAWIRIDT 1446

Query: 5919 NRNQNTEIRTNNSQKNSKKDLFYLRIPEINLPNSHKGFFDWIGMNEKMLKRPISNLEHWF 6098
            NRNQNT+IRT NSQ + KKD F L+IPEINLPNSHKGF DW+GMNEKMLK PISNLE WF
Sbjct: 1447 NRNQNTQIRTKNSQISYKKDFFDLKIPEINLPNSHKGFCDWMGMNEKMLKHPISNLELWF 1506

Query: 6099 FPEFVLLYNAYKTKPWFIPXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFLIASNKKHRNQ 6278
            FPEF LLY  YK KPWFIP                           G+FLIASNKKHRNQ
Sbjct: 1507 FPEFFLLYKTYKMKPWFIP------SKLLLLNLNRSENKKINEKEKGAFLIASNKKHRNQ 1560

Query: 6279 EEKEPTSRGDLGSVLSQQKDIEESNARSXXXXXXXXXXXXXXTEAELDFFLKRYLLFQLR 6458
            E+KEPTS G+  SVLSQQKDIEE+ ARS              T+AEL  FLKRYLLFQLR
Sbjct: 1561 EDKEPTSPGERRSVLSQQKDIEENYARS---NMKKGKKQKQYTKAELHLFLKRYLLFQLR 1617

Query: 6459 WDDTLNQRMINNIKVYCLLLRLVDPRKITISSLQKREMSLDIMLIQKNLTLTELMKKGVL 6638
            WD+TLNQRMI NI VYCLLL+L+D RKITISS+QK+EMSLDIM+I KNLTL+E MKKGV 
Sbjct: 1618 WDETLNQRMIKNINVYCLLLKLIDLRKITISSIQKKEMSLDIMMINKNLTLSEFMKKGVF 1677

Query: 6639 IIEPIRLFGKKDGQFIMYQTIGISLVHKSKHQTNQKYQEQRYVSKNNLDEAISPYQRLTG 6818
            I+EPIRL  +KDG+FIMYQTIGISLVHK+KH   QKYQEQ + S NN +E IS +QR+TG
Sbjct: 1678 ILEPIRLSEQKDGKFIMYQTIGISLVHKNKH---QKYQEQGHASNNNFNETISTHQRITG 1734

Query: 6819 NRNKNRFDLLVPENILSFRHRRKFRILICFNSKNRNDIDRNLVFLNEKNVKNSSKVSHDN 6998
             R+KNRFDLLV EN+LSFR RRK RILIC NSKNRN I++N VF    NVKNSS+VSH N
Sbjct: 1735 TRDKNRFDLLVTENLLSFRLRRKLRILICLNSKNRNSIEKNPVFW---NVKNSSQVSHYN 1791

Query: 6999 NHLDREENQLMKFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKI 7163
            NHLDR++NQLMK KLFLWPNYRLEDLACMNRYWFDTNNGSRF MLRIHLYPRLKI
Sbjct: 1792 NHLDRDKNQLMKLKLFLWPNYRLEDLACMNRYWFDTNNGSRFGMLRIHLYPRLKI 1846



 Score =  142 bits (359), Expect = 6e-30
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 1571 MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYVFLRLVRVMEEGTEKKVSA 1750
            MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSY+FL   +VMEEGTEKKVSA
Sbjct: 1    MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60

Query: 1751 ISGFITGQFMMFVSIYYVPLASSIG 1825
             +GFITGQ MMF+SIYY P+  ++G
Sbjct: 61   TTGFITGQLMMFISIYYAPMHLALG 85