BLASTX nr result
ID: Rehmannia27_contig00001345
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00001345
(596 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo... 203 5e-57
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo... 203 5e-57
gb|KYP44025.1| Retrovirus-related Pol polyprotein from transposo... 190 2e-56
gb|KYP69858.1| Retrovirus-related Pol polyprotein from transposo... 191 4e-56
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 199 1e-55
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 195 3e-54
gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposo... 192 2e-53
ref|XP_015160015.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 186 5e-51
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 185 6e-51
gb|KFK32108.1| hypothetical protein AALP_AA6G199700 [Arabis alpina] 184 1e-50
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo... 184 2e-50
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 183 3e-50
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 182 1e-49
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 181 2e-49
gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposo... 178 5e-49
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 178 3e-48
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera] 175 2e-47
gb|KYP70935.1| Retrovirus-related Pol polyprotein from transposo... 165 4e-47
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera] 163 8e-44
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo... 165 9e-44
>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 203 bits (516), Expect = 5e-57
Identities = 111/211 (52%), Positives = 135/211 (63%), Gaps = 13/211 (6%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQNHGGG-------VQDQH 159
V+RSRDVVF EDQTIED K EK + ++ PV N+ H V +Q
Sbjct: 679 VVRSRDVVFFEDQTIEDIKNSEKPRLRKST--ELTPVQHENNETHQDNDPEEDEPVLEQS 736
Query: 160 HDTTGDXXXXXXXEDXXXXXXXXXXXXXX------YSPHEYVMLTDGGEPQSFEEAISHD 321
+ T D + Y+ EYVMLTD GEPQS++EAI
Sbjct: 737 NQETHDEPAQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEGEPQSYKEAIKDI 796
Query: 322 QKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRYKARLVVK 501
K+ W +AM+EEM SL ENHTY+LV+LPKG+R LKNKWVYR+KTE+ + +PRYKARLVVK
Sbjct: 797 HKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVK 856
Query: 502 GFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
GF Q+KG+DFEEIFSPVVKMSSIRV+LGIAA
Sbjct: 857 GFGQEKGIDFEEIFSPVVKMSSIRVILGIAA 887
>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 203 bits (516), Expect = 5e-57
Identities = 111/211 (52%), Positives = 135/211 (63%), Gaps = 13/211 (6%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQNHGGG-------VQDQH 159
V+RSRDVVF EDQTIED K EK + ++ PV N+ H V +Q
Sbjct: 679 VVRSRDVVFFEDQTIEDIKNSEKPRLRKST--ELTPVQHENNETHQDNDPEEDEPVLEQS 736
Query: 160 HDTTGDXXXXXXXEDXXXXXXXXXXXXXX------YSPHEYVMLTDGGEPQSFEEAISHD 321
+ T D + Y+ EYVMLTD GEPQS++EAI
Sbjct: 737 NQETHDEPAQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEGEPQSYKEAIKDI 796
Query: 322 QKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRYKARLVVK 501
K+ W +AM+EEM SL ENHTY+LV+LPKG+R LKNKWVYR+KTE+ + +PRYKARLVVK
Sbjct: 797 HKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVK 856
Query: 502 GFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
GF Q+KG+DFEEIFSPVVKMSSIRV+LGIAA
Sbjct: 857 GFGQEKGIDFEEIFSPVVKMSSIRVILGIAA 887
>gb|KYP44025.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 331
Score = 190 bits (482), Expect = 2e-56
Identities = 105/217 (48%), Positives = 133/217 (61%), Gaps = 20/217 (9%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKS----ESNQYVPDDVDPVSSPRNQNH-------GGGV 147
++RSRDV F+EDQTIED ++EK+ + N D+VD P Q+ GGG+
Sbjct: 109 LVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNLTDVDNVDGSVQPGEQHDDVDDQQLGGGL 168
Query: 148 Q------DQHHDTTGDXXXXXXXEDXXXXXXXXXXXXXX---YSPHEYVMLTDGGEPQSF 300
+ H+ + D E YS EYV LTDGGEP+ F
Sbjct: 169 DVHIDDDQEEHEMSHDENIDDAPEPRQVQLRRSNRQRQPSTRYSSDEYVTLTDGGEPECF 228
Query: 301 EEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRY 480
EEA+ ++K W++AM++EM SL +NHTYDLVKLPKGKR L+N+W++R K E PRY
Sbjct: 229 EEALKSEEKQQWLDAMQDEMKSLDDNHTYDLVKLPKGKRALENRWIFRGKQESNYTSPRY 288
Query: 481 KARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIA 591
KARLVVKGF Q+KGVDF EIFSPVVKMSSIR VL +A
Sbjct: 289 KARLVVKGFKQRKGVDFNEIFSPVVKMSSIRAVLSLA 325
>gb|KYP69858.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 397
Score = 191 bits (484), Expect = 4e-56
Identities = 106/221 (47%), Positives = 138/221 (62%), Gaps = 24/221 (10%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKS--ESNQYVPDDVDPVSSP-------------RNQNH 135
++RSRDV F+EDQTIED ++EK+ E ++ + DVDP+ P +Q
Sbjct: 109 LVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNL-TDVDPMRLPIHNLDNVDGSVHVDDQQL 167
Query: 136 GGGV------QDQHHDTTGDXXXXXXXED---XXXXXXXXXXXXXXYSPHEYVMLTDGGE 288
GG+ + H+ + D E YS +EYV LTDGGE
Sbjct: 168 VGGLDVPIDDDQEEHEMSHDENIDDAPEPHQVQLMRSNRQRQPSTRYSSNEYVTLTDGGE 227
Query: 289 PQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSL 468
P+ FEEA+ ++K W++AM++EM SL +NHTYDLVKLPKGKR L+N+W++R+K E S
Sbjct: 228 PECFEEALESEEKQQWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFRVKQESNST 287
Query: 469 QPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIA 591
PRYKARLVVKGF Q+KGVDF EIFSPVVKMSSIR VL +A
Sbjct: 288 SPRYKARLVVKGFRQRKGVDFNEIFSPVVKMSSIRAVLSLA 328
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 199 bits (506), Expect = 1e-55
Identities = 109/222 (49%), Positives = 142/222 (63%), Gaps = 24/222 (10%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPR--------NQNHGGGV--Q 150
++RSRDVVF+EDQTIED ++EKS + ++ P PR NQ G+ +
Sbjct: 693 LVRSRDVVFVEDQTIEDIDKVEKSTDDS-AEFELPPTVVPRQVGDDVQDNQPEAPGLPNE 751
Query: 151 DQHHDTTGDXXXXXXXEDXXXXXXXXXXXXXXY--------------SPHEYVMLTDGGE 288
D+ DT G+ D Y SPHEYV+LTDGGE
Sbjct: 752 DELADTEGNEDNGDDDADEEDQPQPPILNNPPYHTRSGRVVQQSTRYSPHEYVLLTDGGE 811
Query: 289 PQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSL 468
P SFEEAI + K+ W+EAM++E+ SL EN T++LVKLPKGKR LKNKWV+++K +E +
Sbjct: 812 PDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKMKHDEHNS 871
Query: 469 QPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
PR+KARLVVKGF+Q+KG+DF+EIFSPVVKM+SIR VLG+AA
Sbjct: 872 LPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAA 913
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 195 bits (495), Expect = 3e-54
Identities = 111/222 (50%), Positives = 138/222 (62%), Gaps = 24/222 (10%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSES------------NQYVPDDVDPVSSPRNQNHGGG 144
++RSRDVVF E+QTIED ++++ ES ++ DDVD V N +G
Sbjct: 691 LVRSRDVVFFENQTIEDIDKVKQPESRDSGSLVDIEPVSRRYTDDVDEVQE--NVQNGDP 748
Query: 145 VQDQHHDTT-----GDXXXXXXXE-------DXXXXXXXXXXXXXXYSPHEYVMLTDGGE 288
V D DT D E D YSP +YV+LTDGGE
Sbjct: 749 VPDYQGDTVDVDGHADDVVHQEQEVPSQVPVDLPRRSDRERRPSTRYSPSQYVLLTDGGE 808
Query: 289 PQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSL 468
P+S+EEA+ DQK W EAM+EEMNSL N T++LVK PK ++ LKN+WVYR+K EE +
Sbjct: 809 PESYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTS 868
Query: 469 QPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
PR+KARLVVKGFSQKKG+DF+EIFSPVVK SSIRVVLG+AA
Sbjct: 869 VPRFKARLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAA 910
>gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 990
Score = 192 bits (488), Expect = 2e-53
Identities = 108/229 (47%), Positives = 139/229 (60%), Gaps = 31/229 (13%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKS--ESNQYVPDDVDPVSSP------------------ 120
++RSRDV F+EDQTIED ++EK+ E ++ + D VDP+ P
Sbjct: 605 LVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNLTD-VDPMRLPIHNLDNVDGSVQPGEQHD 663
Query: 121 --RNQNHGGGVQ------DQHHDTTGDXXXXXXXEDXXXXXXXXXXXXXX---YSPHEYV 267
+Q GGG+ + H+ + D E YS EYV
Sbjct: 664 DVDDQQLGGGLDVPIDDDQEEHEMSHDENIDDAPEPHQVQLRRSNRQRQPSTRYSSDEYV 723
Query: 268 MLTDGGEPQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRL 447
LTDGGEP+ FEEA+ ++K W++AM++EM SL +NHTYDLVKLPKGKR L+N+W++R+
Sbjct: 724 TLTDGGEPECFEEALESEEKQQWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFRV 783
Query: 448 KTEEQSLQPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
K E S PRYKARLVVKGF Q+KGVDF EIFSPVVKMSSIR VL +AA
Sbjct: 784 KQESNSTSPRYKARLVVKGFRQRKGVDFNEIFSPVVKMSSIRAVLSLAA 832
>ref|XP_015160015.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Solanum tuberosum]
Length = 1417
Score = 186 bits (471), Expect = 5e-51
Identities = 100/213 (46%), Positives = 136/213 (63%), Gaps = 17/213 (7%)
Frame = +1
Query: 7 RSRDVVFLEDQTIEDAKQIEK--SESNQYVPD-DVDPVSSPRNQNHGGGVQDQHH----- 162
RSRD+VF EDQTIED ++EK S+S++ + D D P++ P +N ++D H
Sbjct: 572 RSRDIVFFEDQTIEDLDKVEKVDSQSSESLVDVDPVPLTIPPGENLQVDIEDDDHIQNDQ 631
Query: 163 ---------DTTGDXXXXXXXEDXXXXXXXXXXXXXXYSPHEYVMLTDGGEPQSFEEAIS 315
D G+ + YSP+E+V LTDGGEP+S +EA+
Sbjct: 632 YVIDAPVQNDVVGEQPTIIDAPESSQXSTREKIPSYRYSPNEFVRLTDGGEPESLDEAME 691
Query: 316 HDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRYKARLV 495
++ +MW +AMK+EM L +N T+DLV LPK ++ LKN WV+R+K E+ + PRYK RLV
Sbjct: 692 TEENEMWFDAMKDEMKXLYDNDTFDLVMLPKDRKALKNMWVFRVKHEDGNSIPRYKTRLV 751
Query: 496 VKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
VKGFSQKK +DF+EIFSPV+KMSSIRVVLG+ A
Sbjct: 752 VKGFSQKKEIDFDEIFSPVMKMSSIRVVLGLVA 784
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 185 bits (469), Expect = 6e-51
Identities = 97/200 (48%), Positives = 131/200 (65%), Gaps = 2/200 (1%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQNHGGGVQDQH--HDTTG 174
++ SRD +F+ED TI+D ++I+ + D+ V +P V +Q +
Sbjct: 467 LVGSRDAMFMEDHTIQDIEKIDVEDEAHDDQLDIGNVENPTQVEMDDDVHEQSLVAEAPL 526
Query: 175 DXXXXXXXEDXXXXXXXXXXXXXXYSPHEYVMLTDGGEPQSFEEAISHDQKDMWMEAMKE 354
D D YS +YV+LTDGGEP+S++EA+ + K W++AM++
Sbjct: 527 DIPLRRSTRDRHHSTR--------YSVDDYVLLTDGGEPESYKEAMGDENKIKWVDAMQD 578
Query: 355 EMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRYKARLVVKGFSQKKGVDFE 534
EM SL ENH+Y+LV+LPKGKR LKN+WVYR+K EE + QPRYKARLVVKG+SQKKG+DF+
Sbjct: 579 EMKSLHENHSYELVELPKGKRALKNRWVYRVKQEEHASQPRYKARLVVKGYSQKKGIDFD 638
Query: 535 EIFSPVVKMSSIRVVLGIAA 594
EIFS VVKMSSIRVVLG+ A
Sbjct: 639 EIFSSVVKMSSIRVVLGLVA 658
>gb|KFK32108.1| hypothetical protein AALP_AA6G199700 [Arabis alpina]
Length = 1415
Score = 184 bits (468), Expect = 1e-50
Identities = 104/218 (47%), Positives = 131/218 (60%), Gaps = 20/218 (9%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIED-------AKQIEKSESNQYVPD-------------DVDPVSSP 120
+IRSRDVVF+EDQTI+D A++ E ++ VP D +P
Sbjct: 455 LIRSRDVVFMEDQTIKDIDKSGKPAQRYECLIDSEVVPSTSVHGQVESEVHVDTPSADAP 514
Query: 121 RNQNHGGGVQDQHHDTTGDXXXXXXXEDXXXXXXXXXXXXXXYSPHEYVMLTDGGEPQSF 300
+ G D H +T Y P EY++LTDGGEP+SF
Sbjct: 515 AHDESIGDHGDDHGETPTTENPPIVRRSQRGLIPSTR-----YDPSEYMLLTDGGEPESF 569
Query: 301 EEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRY 480
EA+ + KD W+ AM +EM S EN T++LVKLPKGK+ L NKWVY++K EE L PRY
Sbjct: 570 GEALECEHKDKWLNAMGDEMESFDENDTFELVKLPKGKKVLLNKWVYKIKHEENILLPRY 629
Query: 481 KARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
KARLVVKGFSQKKG++++EIFSPVVKMSSIRVVLG+AA
Sbjct: 630 KARLVVKGFSQKKGINYDEIFSPVVKMSSIRVVLGLAA 667
>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1314
Score = 184 bits (466), Expect = 2e-50
Identities = 101/215 (46%), Positives = 133/215 (61%), Gaps = 17/215 (7%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQNHGGGVQDQHHDTTGDX 180
++RSRDV+F EDQTI+D K+ EK + + V D SSP N+ GG Q D
Sbjct: 689 IVRSRDVIFFEDQTIQDIKKPEKPKQKE-VQD-----SSPIVINNSGGEISQRIDEPNQT 742
Query: 181 XXXXXXEDXXXXXXXXXXXXXXYSPH-----------------EYVMLTDGGEPQSFEEA 309
+ P +YV LTD GEPQSF EA
Sbjct: 743 EQPESEQSQTMQEEQMETNQEEQEPEVRRSMRVRQPSKRYFSDDYVNLTDEGEPQSFIEA 802
Query: 310 ISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRYKAR 489
I + K+ W++AM+EE+ SL+EN TY+LV+LP+G++ LKNKWV++LKTEE + +PRYKAR
Sbjct: 803 IEMNDKEKWLQAMEEELQSLKENETYELVELPQGRKALKNKWVFKLKTEENNTKPRYKAR 862
Query: 490 LVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
+VVKG +QKKG+DFEEIFSPVVKM+SIR +LG+AA
Sbjct: 863 IVVKGCNQKKGIDFEEIFSPVVKMTSIRAILGLAA 897
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 183 bits (465), Expect = 3e-50
Identities = 99/204 (48%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Frame = +1
Query: 4 IRSRDVVFLEDQTIEDAKQIEK--SESNQYVPDDVDPVSSPRNQNHG-----GGVQDQHH 162
+RSRDV F+EDQTIED + EK SE++ + +VDPV S + G D
Sbjct: 654 VRSRDVKFMEDQTIEDIDKTEKITSETDNRL-SNVDPVLSDEQHDDVDDQQLGDAFDVPI 712
Query: 163 DTTGDXXXXXXXEDXXXXXXXXXXXXXXYSPHEYVMLTDGGEPQSFEEAISHDQKDMWME 342
D + + ED Y +YV LTD GEP+ + EA+ ++K W++
Sbjct: 713 DDSEEEHGMSQDEDLGDAPEPPQVQIRRYPSDDYVTLTDEGEPECYLEAMESEEKKKWLD 772
Query: 343 AMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRYKARLVVKGFSQKKG 522
AM++EM SL +NHT+DLVKLPK K+ L+N+W+YR+K E S PRYKARLVVKGF Q+KG
Sbjct: 773 AMQDEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKG 832
Query: 523 VDFEEIFSPVVKMSSIRVVLGIAA 594
+DF EIFSPVVKMSSIR+VL +AA
Sbjct: 833 IDFNEIFSPVVKMSSIRIVLSLAA 856
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 182 bits (461), Expect = 1e-49
Identities = 107/238 (44%), Positives = 138/238 (57%), Gaps = 40/238 (16%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQNHGGGVQDQHHDTT--- 171
++RSRDVVF+ED TI+D ++ ES Q+ D +D +P N V+D+ HD
Sbjct: 576 LVRSRDVVFMEDHTIQDIEKTNPMES-QHSGDLIDLDPAPLT-NLPTQVEDEAHDDQHDM 633
Query: 172 GDXXXXXXXEDXXXXXXXXXXXXXX----------------------------------- 246
GD ED
Sbjct: 634 GDVETPTQVEDEAHDDQHDMGDVETPTQVEVDDDVHEQSPAAEAPSDIPLRRSTRDRHPS 693
Query: 247 --YSPHEYVMLTDGGEPQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRT 420
YS +YV+L DGGEP+S+ EA+ + K W++AM++EM SL ENH+++LVKLPKGKR
Sbjct: 694 TRYSVDDYVLLIDGGEPESYVEAMEDENKMKWVDAMQDEMESLHENHSFELVKLPKGKRA 753
Query: 421 LKNKWVYRLKTEEQSLQPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
LKN+WVYR+K EE + QPRYKARLVVKGF+QKKG+DF+EIF PVVKMSSIRVVLG+AA
Sbjct: 754 LKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKGIDFDEIFFPVVKMSSIRVVLGLAA 811
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 181 bits (460), Expect = 2e-49
Identities = 107/238 (44%), Positives = 139/238 (58%), Gaps = 40/238 (16%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQNHGGGVQDQHHDTT--- 171
++RSRDVVF+ED TI+D ++ ES Q+ D +D +P +N V+D+ HD
Sbjct: 644 LVRSRDVVFMEDHTIQDIEKTNPMES-QHSGDLIDLDLAPL-KNLPTQVEDEAHDDQHDM 701
Query: 172 GDXXXXXXXEDXXXXXXXXXXXXXX----------------------------------- 246
GD ED
Sbjct: 702 GDVETPTQVEDETHDDQHDMGDVEIPTQVEVDDDVHEQSPAAEAPSDIPLRRFTRDRHPS 761
Query: 247 --YSPHEYVMLTDGGEPQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRT 420
YS +YV+LTDG EP+S+ EA+ + K W++ M++EM SL ENH+++LVKLPKGKR
Sbjct: 762 TRYSVDDYVLLTDGEEPESYVEAMKDENKMKWVDXMRDEMESLHENHSFELVKLPKGKRX 821
Query: 421 LKNKWVYRLKTEEQSLQPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
LKN+WVYR+K EE + QPRYKARLVVKGF+QKKG+DF+EIFSPVVKMSSIRVVLG+AA
Sbjct: 822 LKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKGIDFDEIFSPVVKMSSIRVVLGLAA 879
>gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 701
Score = 178 bits (451), Expect = 5e-49
Identities = 101/230 (43%), Positives = 133/230 (57%), Gaps = 32/230 (13%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQ--------------YVPDDVDPVSSPRNQNHG 138
++RS DV +EDQTIED ++EK+ + + D+V+ +P ++ HG
Sbjct: 109 LVRSHDVQLMEDQTIEDINKVEKTTPKKDNNLTDGNPMRLPIHNLDNVE-TDAPNDEQHG 167
Query: 139 GGVQDQHH--------DTTGDXXXXXXXEDXXXXXXXXXXXXXX----------YSPHEY 264
V DQ + D T + +D YS EY
Sbjct: 168 D-VDDQQNGDVLEVPIDDTQEEHDMVHDDDLDNAHELPQVPPRRSNKLRQFSSRYSSDEY 226
Query: 265 VMLTDGGEPQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYR 444
V LTDGGEP+ FEEA+ ++K W++AM++EM SL +NHTYDLVKLPKGKR L+N+W++R
Sbjct: 227 VALTDGGEPECFEEALESEKKQRWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFR 286
Query: 445 LKTEEQSLQPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
+K E S PRYKARLVVKGF Q+ VDF EIFSPVVKMSSIR VL + A
Sbjct: 287 VKQESNSTSPRYKARLVVKGFRQRNDVDFNEIFSPVVKMSSIRTVLSLVA 336
>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 178 bits (451), Expect = 3e-48
Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 2/200 (1%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQNHGGGVQDQHHDTTGDX 180
++RSRDVV +ED TI+D + ES Q+ D +D +P N V+D+ HD D
Sbjct: 583 LVRSRDVVXMEDHTIQDIXKTNPMES-QHSXDLIDLDPAPLT-NLPTQVEDEAHDDQHDM 640
Query: 181 XXXXXXEDXXXXXXXXXXXXXX--YSPHEYVMLTDGGEPQSFEEAISHDQKDMWMEAMKE 354
YS +YV+LTDGGE +S+ E + + K W++AM++
Sbjct: 641 SPEAETPSDIPLRRSTRDRHPSTRYSVDDYVLLTDGGELESYVEXMEDENKMKWVDAMQD 700
Query: 355 EMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQPRYKARLVVKGFSQKKGVDFE 534
EM SL NH ++LVKLPKGKR LK +WVYR+K EE + QP YKARL+VKGF+QKKG DF+
Sbjct: 701 EMESLHVNHYFELVKLPKGKRALKXRWVYRVKQEEHTSQPXYKARLIVKGFNQKKGXDFD 760
Query: 535 EIFSPVVKMSSIRVVLGIAA 594
EIFSPVVKMSSIRVVLG+AA
Sbjct: 761 EIFSPVVKMSSIRVVLGLAA 780
>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 175 bits (443), Expect = 2e-47
Identities = 101/219 (46%), Positives = 133/219 (60%), Gaps = 22/219 (10%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPD--DVDPVSSPRNQNHGGGVQDQHHD--- 165
++RSRD +F+ED TI+D ++ + ++ QY + D DPV V+D+ HD
Sbjct: 483 LVRSRDAMFMEDHTIQDIEKTDVTKF-QYSDNLIDFDPVPLTHLPTQ---VEDEAHDDQP 538
Query: 166 TTGDXXXXXXXEDXXXXXXXXXXXXXX-----------------YSPHEYVMLTDGGEPQ 294
GD E +S +YV+LTDGGEP+
Sbjct: 539 NIGDVETPTQVEMDDDVHEQSPVAEAPLDIPLRRSTRDQHPSTRHSVDDYVLLTDGGEPE 598
Query: 295 SFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEEQSLQP 474
S+EEA+ + K W++AM++EM L ENH+Y+LVKLP GKR LKN+WVYR+K EE + P
Sbjct: 599 SYEEAMGDENKIKWVDAMQDEMKPLHENHSYELVKLPNGKRALKNRWVYRVKQEEHASXP 658
Query: 475 RYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIA 591
RYKARLVVKGFSQKKG+DF+EIFS VVKMSSI VVLG+A
Sbjct: 659 RYKARLVVKGFSQKKGIDFDEIFSXVVKMSSICVVLGLA 697
>gb|KYP70935.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 314
Score = 165 bits (418), Expect = 4e-47
Identities = 78/116 (67%), Positives = 92/116 (79%)
Frame = +1
Query: 247 YSPHEYVMLTDGGEPQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLK 426
YS EYV LTDGGEP+ FEEA+ ++K W++ MK+EM SL + HTYDLVKLPKGKR L+
Sbjct: 31 YSSDEYVTLTDGGEPECFEEALESEEKKKWLDKMKDEMKSLHDTHTYDLVKLPKGKRALE 90
Query: 427 NKWVYRLKTEEQSLQPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
N+W++R+K E S PRYKARLVVKGF Q KGVDF EIFSPVVKMSSIR VL + A
Sbjct: 91 NRWIFRVKQESNSTFPRYKARLVVKGFRQIKGVDFNEIFSPVVKMSSIRTVLSLIA 146
>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 163 bits (412), Expect = 8e-44
Identities = 75/116 (64%), Positives = 97/116 (83%)
Frame = +1
Query: 247 YSPHEYVMLTDGGEPQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLK 426
Y+ +EY++L DGGEP++++E + +D+K W+ AM EE+ SL +N+T++L++LPKGKRTLK
Sbjct: 344 YTSNEYLLLFDGGEPENYQEVLLYDEKKEWLRAMHEEIKSLHKNNTFELMELPKGKRTLK 403
Query: 427 NKWVYRLKTEEQSLQPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
NKWV + K E QPRYKARLVVKGFSQKKG+DFEEIFSPVVKMS IRVVLG+ A
Sbjct: 404 NKWVLKRKPEPNESQPRYKARLVVKGFSQKKGIDFEEIFSPVVKMSLIRVVLGLVA 459
>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 165 bits (417), Expect = 9e-44
Identities = 97/225 (43%), Positives = 131/225 (58%), Gaps = 27/225 (12%)
Frame = +1
Query: 1 VIRSRDVVFLEDQTIEDAKQIEKSESNQYVPDDVDPVSSPRNQ--NHGGGVQDQHHDTT- 171
++RSRDV+F E +TIED K E+ + + D V+P S ++ G Q+ H+T
Sbjct: 689 IVRSRDVIFHEHETIEDLKG---GEAAKPMEDGVNPTSHVPSECATDGRQTQEPEHETEE 745
Query: 172 ---GDXXXXXXX---------------------EDXXXXXXXXXXXXXXYSPHEYVMLTD 279
GD E Y EY+++ D
Sbjct: 746 PVFGDEESVDEEVVVPDTEANEQGEPSYTSGQVEPQIRRSTRERQPSTKYPSSEYILIAD 805
Query: 280 GGEPQSFEEAISHDQKDMWMEAMKEEMNSLQENHTYDLVKLPKGKRTLKNKWVYRLKTEE 459
GEP+SF+E SH K W++AM+EEM+SL+ N+TY+LV+LPKG+R LKNKWV++LK +
Sbjct: 806 EGEPESFQEVQSHKDKGCWVKAMQEEMDSLKRNNTYELVQLPKGRRVLKNKWVFKLKKDG 865
Query: 460 QSLQPRYKARLVVKGFSQKKGVDFEEIFSPVVKMSSIRVVLGIAA 594
L R+KARLVVKGFSQK+G+DFEEIFSPVVKM SIRV+LG+ A
Sbjct: 866 DKL-VRHKARLVVKGFSQKQGIDFEEIFSPVVKMCSIRVILGLVA 909