BLASTX nr result
ID: Rehmannia26_contig00035284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00035284
(471 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 73 3e-13
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 70 9e-13
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 51 2e-12
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 60 1e-11
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 51 2e-11
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 59 3e-11
ref|XP_003576321.1| PREDICTED: uncharacterized protein LOC100820... 60 3e-11
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 59 3e-11
ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein A... 51 4e-11
ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein A... 65 4e-11
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 60 8e-11
gb|EMJ01337.1| hypothetical protein PRUPE_ppa017266mg, partial [... 63 8e-11
gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [... 47 1e-10
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A... 61 2e-10
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A... 61 2e-10
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 59 3e-10
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 59 3e-10
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 59 3e-10
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo... 57 3e-10
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 58 4e-10
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 72.8 bits (177), Expect(2) = 3e-13
Identities = 47/126 (37%), Positives = 65/126 (51%)
Frame = +2
Query: 80 CQATGQLVNMDKSSIFYFSSARIHIPLSKSPSAILLVVSKFSPK*NILDSPSLLVGQKKK 259
C A+GQL+N++KSSIF+ + I S + VVS L P+ KKK
Sbjct: 1316 CIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPG---TYLGLPTFWHRSKKK 1372
Query: 260 FLGMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELVAISA 439
LG + R++ K +L Q + L+K+V A+P Y M CFK +CKEL I A
Sbjct: 1373 ALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILA 1432
Query: 440 RFWWGS 457
FWWG+
Sbjct: 1433 DFWWGN 1438
Score = 27.3 bits (59), Expect(2) = 3e-13
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL F A+ +L ++L +Y G L
Sbjct: 1290 FADDSLFFLRATLQNCETLSDLLHTYCIASGQL 1322
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 70.1 bits (170), Expect(2) = 9e-13
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Frame = +2
Query: 83 QATGQLVNMDKSSIFYFSSARIHIP-LSKSPSAILLV--VSKFSPK*NILDSPSLLVGQK 253
Q +GQ++N++KS+I + + I I KS S I L K+ L P L G K
Sbjct: 707 QLSGQMINLNKSAITFGKNVDIQIKDWIKSRSGISLEGGTGKY------LGLPECLSGSK 760
Query: 254 KKFLGMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELVAI 433
+ G L+ RL +L Q + L+KS+ ALP+Y+MSCFKL +C++L +
Sbjct: 761 RDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTV 820
Query: 434 SARFWWGS 457
FWW S
Sbjct: 821 MMDFWWNS 828
Score = 28.5 bits (62), Expect(2) = 9e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADD+LL C+A++ + L L Y + G +
Sbjct: 680 FADDTLLMCKATKQECEELMQCLSQYGQLSGQM 712
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 51.2 bits (121), Expect(2) = 2e-12
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 344 LVKSVLNALPIYIMSCFKLSVGICKELVAISARFWWGSPTE 466
L+K V ++P+Y+MSCF L G+C E+ + ARFWWG E
Sbjct: 730 LLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGE 770
Score = 46.2 bits (108), Expect(2) = 2e-12
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +1
Query: 145 NTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGYVLDCARKKIGNWKNNFLS 324
N H + + L ++ S +LGLP+++GR+K F Y+ + KK+ W+ LS
Sbjct: 664 NIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWREQTLS 723
Query: 325 AAGREI 342
AG+E+
Sbjct: 724 IAGKEV 729
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +2
Query: 83 QATGQLVNMDKSSIFYFSSARIHIPLSKSPSAILLVVSKFSPK*NILDSPSLLVGQKKKF 262
+A+GQ+ N +KSS+F+ + L VVSK+ L PS+ +G+KK
Sbjct: 685 KASGQIFNFEKSSMFFGGKIPEEQKAAIRNIFNLNVVSKYE---KYLGLPSM-IGRKK-- 738
Query: 263 LGMSSIVLERRLAI-GKITSLVQRVERS-----LVKSVLNALPIYIMSCFKLSVGICKEL 424
+S E +L + KI + ++ S L+K+V A+P Y MS FKL G+C+E+
Sbjct: 739 ---TSFFREVKLRVLSKINNWQHKMFSSGGKEILIKAVAQAVPAYAMSVFKLPKGLCEEI 795
Query: 425 VAISARFWWGS 457
+ A+FWWGS
Sbjct: 796 QSEIAKFWWGS 806
Score = 35.0 bits (79), Expect(2) = 1e-11
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+F AS A+ LK I D Y + G +
Sbjct: 658 FADDSLVFSTASVAECKHLKGIFDRYAKASGQI 690
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 50.8 bits (120), Expect(2) = 2e-11
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 344 LVKSVLNALPIYIMSCFKLSVGICKELVAISARFWWGSPTE 466
L+KSV A+P YIMSCF+L G+C E+ ++ FWW E
Sbjct: 41 LIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWWXQKEE 81
Score = 43.5 bits (101), Expect(2) = 2e-11
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +1
Query: 223 GLPLIIGRSKKEVFGYVLDCARKKIGNWKNNFLSAAGREI 342
GLP +G SK+ V G+V + ++ WK FLS AGRE+
Sbjct: 1 GLPYCVGHSKRAVLGFVKERVWTRLNGWKEKFLSVAGREV 40
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 58.9 bits (141), Expect(2) = 3e-11
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Frame = +2
Query: 83 QATGQLVNMDKSSIFYFSSARIHIPLSKSPSAI-----LLVVSKFSPK*NILDSPSLLVG 247
+A+GQ+ N +KSS+F+ A S+ SAI L VV K+ L P +L
Sbjct: 802 KASGQIFNFEKSSMFFSGKAS-----SEQISAIKSIFQLKVVPKYE---KYLGLPPMLGR 853
Query: 248 QKKKFLGMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELV 427
K F + + +++ + L+K+V A+P Y MS FKL G+C+++
Sbjct: 854 NKMSFFKEVKLKVTSKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDIQ 913
Query: 428 AISARFWWGS 457
ARFWWG+
Sbjct: 914 KEIARFWWGT 923
Score = 34.7 bits (78), Expect(2) = 3e-11
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+F +AS A LK I D Y + G +
Sbjct: 775 FADDSLVFSKASVADCKYLKGIFDCYAKASGQI 807
>ref|XP_003576321.1| PREDICTED: uncharacterized protein LOC100820834 [Brachypodium
distachyon]
Length = 846
Score = 60.1 bits (144), Expect(2) = 3e-11
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 100 CQYGQILHF---LFFFSPNTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGY 270
C GQ++ FFSPNT + ++ +C TL + K+LGLP I+G + + F +
Sbjct: 51 CASGQLVSVDKSSIFFSPNTDVVQRQKVCETLDIMTEALSDKYLGLPPIVGADRSDCFQF 110
Query: 271 VLDCARKKIGNWKNNFLSAAGREI 342
++D +K+ WK LS G+E+
Sbjct: 111 LVDRVKKRTSGWKEKMLSVGGKEV 134
Score = 33.5 bits (75), Expect(2) = 3e-11
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+ +A + A LK ILD Y G L
Sbjct: 24 FADDSLILMDADELNATCLKRILDDYCCASGQL 56
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 58.9 bits (141), Expect(2) = 3e-11
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Frame = +2
Query: 83 QATGQLVNMDKSSIFYFSSARIHIPLSKSPSAI-----LLVVSKFSPK*NILDSPSLLVG 247
+A+GQ+ N +KSS+F+ A S+ SAI L VV K+ L P +L
Sbjct: 115 KASGQIFNFEKSSMFFSGKAS-----SEQISAIKSIFQLKVVPKYE---KYLGLPPMLGR 166
Query: 248 QKKKFLGMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELV 427
K F + + +++ + L+K+V A+P Y MS FKL G+C+++
Sbjct: 167 NKMSFFKEVKLKVTSKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDIQ 226
Query: 428 AISARFWWGS 457
ARFWWG+
Sbjct: 227 KEIARFWWGT 236
Score = 34.7 bits (78), Expect(2) = 3e-11
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+F +AS A LK I D Y + G +
Sbjct: 88 FADDSLVFSKASVADCKYLKGIFDCYAKASGQI 120
>ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 735
Score = 51.2 bits (121), Expect(2) = 4e-11
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 344 LVKSVLNALPIYIMSCFKLSVGICKELVAISARFWWG 454
L+KS++ A+P Y+MSCF+L +C E+ + A+FWWG
Sbjct: 55 LIKSIIQAIPTYVMSCFELPGHLCNEMHQLMAKFWWG 91
Score = 42.0 bits (97), Expect(2) = 4e-11
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 214 KHLGLPLIIGRSKKEVFGYVLDCARKKIGNWKNNFLSAAGREI 342
K+LGLP + SK E F +++D RK+ W++ LS AG+E+
Sbjct: 12 KYLGLPTELSYSKDEAFRFLVDRVRKQTQGWRDKTLSGAGKEV 54
>ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 527
Score = 64.7 bits (156), Expect(2) = 4e-11
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Frame = +2
Query: 80 CQATGQLVNMDKSSIFY---FSSARIHIPLSKSPSAILLVVSKFSPK*NILDSPSLLVGQ 250
C A+GQLVN +KS+++ S A +H+ IL + + +P L P++
Sbjct: 112 CVASGQLVNHNKSTLYCTPNMSDACVHVLCE-----ILGIPATINPG-RYLGLPTIWGRS 165
Query: 251 KKKFLGMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELVA 430
KK L L ++ K+ +L +L+K+V A+P + M CFK + +C EL A
Sbjct: 166 KKASLSFIKSKLADKIQNWKLCTLSMAGRETLIKAVAQAVPTFPMHCFKFPITLCNELDA 225
Query: 431 ISARFWWG 454
+ A FWWG
Sbjct: 226 MMANFWWG 233
Score = 28.5 bits (62), Expect(2) = 4e-11
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL F A+ A + I++ Y G L
Sbjct: 86 FADDSLFFLSATSANCYEIMRIIEVYCVASGQL 118
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 60.1 bits (144), Expect(2) = 8e-11
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +2
Query: 86 ATGQLVNMDKSSIFYFSSARIHIPLSKSPSAI--LLVVSKFSPK*NILDSPSLLVGQKKK 259
A+GQ+ N +KSS+ + S+ +H + I L VVSK + L PS++ +K
Sbjct: 634 ASGQIFNYEKSSMLF--SSNVHNSQIEIIKGIFQLNVVSKHN---KYLGLPSMVGRRKIS 688
Query: 260 FLGMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELVAISA 439
F + + +L+ + L+K+V A+P Y MS FKL IC+++ A
Sbjct: 689 FFNEIKLRIWNKLSSWQNKLFSSGGREVLIKAVAQAVPAYAMSVFKLPASICEDIQKAIA 748
Query: 440 RFWWGSPTE 466
RFWWGS ++
Sbjct: 749 RFWWGSSSD 757
Score = 32.0 bits (71), Expect(2) = 8e-11
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+F A+Q +LK I D Y G +
Sbjct: 606 FADDSLVFARATQEDCSNLKCIFDRYGSASGQI 638
>gb|EMJ01337.1| hypothetical protein PRUPE_ppa017266mg, partial [Prunus persica]
Length = 525
Score = 62.8 bits (151), Expect(2) = 8e-11
Identities = 34/84 (40%), Positives = 45/84 (53%)
Frame = +1
Query: 91 RATCQYGQILHFLFFFSPNTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGY 270
RA+ Q + FFSPNT S + + ICH L ++ K+LGLP I G SK E Y
Sbjct: 236 RASGQQISLAKSTIFFSPNTPSNLGQQICHILRMPRVDDPGKYLGLPTIWGHSKHEALLY 295
Query: 271 VLDCARKKIGNWKNNFLSAAGREI 342
+ + KI WK LS AG+E+
Sbjct: 296 IKENIMSKIQGWKQQLLSHAGQEV 319
Score = 29.3 bits (64), Expect(2) = 8e-11
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQG 95
FADD+L+F A++ ++ +L++Y R G
Sbjct: 209 FADDTLIFLRATEQNCTNMVQLLNAYCRASG 239
>gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Frame = +1
Query: 82 SGHRATCQYGQILHFLFFFSPNTHSLVKESICHT--LSGVQIQS---------------- 207
S R Q I +LF F SL+ ++ C T L G+++ S
Sbjct: 262 SPSRGIRQGDPISPYLFLFISEVLSLLIKNACETDLLQGIKLNSGGPTLSHLLFANDTLI 321
Query: 208 -------KIKHLGLPLIIGRSKKEVFGYVLDCARKKIGNWKNNFLSAAGREI 342
K+LGLP GR+KKE YV D +K+ W + LS AGREI
Sbjct: 322 FLKATTQNWKYLGLPTSWGRAKKEALVYVKDRILRKVHGWNQHCLSQAGREI 373
Score = 44.3 bits (103), Expect(2) = 1e-10
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 320 LVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELVAISARFWWG 454
L Q L+KSV A+P Y M+ FK +CKE+ ++ A FWWG
Sbjct: 366 LSQAGREILIKSVALAVPAYPMNIFKFPTTLCKEIDSVLAGFWWG 410
>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 478
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 39/124 (31%), Positives = 62/124 (50%)
Frame = +2
Query: 86 ATGQLVNMDKSSIFYFSSARIHIPLSKSPSAILLVVSKFSPK*NILDSPSLLVGQKKKFL 265
A+GQ+ N DKSS+F+ S+ L +VSK L PS++ +K F
Sbjct: 145 ASGQVFNYDKSSMFFSSNTNQSQVEEIKNIFGLNIVSKHE---KYLGLPSMVGRKKISFF 201
Query: 266 GMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELVAISARF 445
+ + +L+ + S + L+K+V A+P + MS FK+ G+C ++ ARF
Sbjct: 202 NEIKLRVLNKLSSWQTRSFSSGGKEVLIKAVAQAVPAFAMSVFKIPQGLCDDIQRAVARF 261
Query: 446 WWGS 457
WWGS
Sbjct: 262 WWGS 265
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+F +AS + LK I Y G +
Sbjct: 117 FADDSLVFSKASLTECRKLKGIFYGYSAASGQV 149
>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 39/124 (31%), Positives = 62/124 (50%)
Frame = +2
Query: 86 ATGQLVNMDKSSIFYFSSARIHIPLSKSPSAILLVVSKFSPK*NILDSPSLLVGQKKKFL 265
A+GQ+ N DKSS+F+ S+ L +VSK L PS++ +K F
Sbjct: 54 ASGQVFNYDKSSMFFSSNTNQSQVEEIKNIFGLNIVSKHE---KYLGLPSMVGRKKISFF 110
Query: 266 GMSSIVLERRLAIGKITSLVQRVERSLVKSVLNALPIYIMSCFKLSVGICKELVAISARF 445
+ + +L+ + S + L+K+V A+P + MS FK+ G+C ++ ARF
Sbjct: 111 NEIKLRVLNKLSSWQTRSFSSGGKEVLIKAVAQAVPAFAMSVFKIPQGLCDDIQRAVARF 170
Query: 446 WWGS 457
WWGS
Sbjct: 171 WWGS 174
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+F +AS + LK I Y G +
Sbjct: 26 FADDSLVFSKASLTECRKLKGIFYGYSAASGQV 58
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 58.5 bits (140), Expect(2) = 3e-10
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +1
Query: 136 FSPNTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGYVLDCARKKIGNWKNN 315
FSPNT SL K ++ L+ + + K+LGLP+ +GRS+ ++F Y+ + ++I WK
Sbjct: 952 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1011
Query: 316 FLSAAGREI 342
LS AG+EI
Sbjct: 1012 LLSRAGKEI 1020
Score = 31.6 bits (70), Expect(2) = 3e-10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+ C A+ +A L+ IL Y G +
Sbjct: 910 FADDSLILCRANGGEAQQLQTILQIYEECSGQV 942
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 58.5 bits (140), Expect(2) = 3e-10
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +1
Query: 136 FSPNTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGYVLDCARKKIGNWKNN 315
FSPNT SL K ++ L+ + + K+LGLP+ +GRS+ ++F Y+ + ++I WK
Sbjct: 924 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 983
Query: 316 FLSAAGREI 342
LS AG+EI
Sbjct: 984 LLSRAGKEI 992
Score = 31.6 bits (70), Expect(2) = 3e-10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+ C A+ +A L+ IL Y G +
Sbjct: 882 FADDSLILCRANGGEAQQLQTILQIYEECSGQV 914
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 58.5 bits (140), Expect(2) = 3e-10
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +1
Query: 136 FSPNTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGYVLDCARKKIGNWKNN 315
FSPNT SL K ++ L+ + + K+LGLP+ +GRS+ ++F Y+ + ++I WK
Sbjct: 920 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 979
Query: 316 FLSAAGREI 342
LS AG+EI
Sbjct: 980 LLSRAGKEI 988
Score = 31.6 bits (70), Expect(2) = 3e-10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+ C A+ +A L+ IL Y G +
Sbjct: 878 FADDSLILCRANGGEAQQLQTILQIYEECSGQV 910
>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
Length = 662
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 109 GQILH---FLFFFSPNTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGYVLD 279
GQ+L+ F FS NT S + + TL + ++LGLP+ +GR K +VF Y+ D
Sbjct: 398 GQMLNKEKFAIMFSSNTGSEKRREVMQTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKD 457
Query: 280 CARKKIGNWKNNFLSAAGREI 342
K+I WK LS AG+EI
Sbjct: 458 RIWKRIQGWKEKMLSRAGKEI 478
Score = 32.7 bits (73), Expect(2) = 3e-10
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+ C A++ A +L+NIL Y G +
Sbjct: 368 FADDSLIPCRANRGDAQNLQNILTLYEEFSGQM 400
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 58.2 bits (139), Expect(2) = 4e-10
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +1
Query: 136 FSPNTHSLVKESICHTLSGVQIQSKIKHLGLPLIIGRSKKEVFGYVLDCARKKIGNWKNN 315
FSPNT SL K ++ L+ + + ++LGLP+ +GRS+ ++F Y+ + ++I WK
Sbjct: 979 FSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1038
Query: 316 FLSAAGREI 342
LS AG+EI
Sbjct: 1039 LLSRAGKEI 1047
Score = 31.6 bits (70), Expect(2) = 4e-10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FADDSLLFCEASQAQAMSLKNILDSYVRPQGNL 101
FADDSL+ C A+ +A L+ IL Y G +
Sbjct: 937 FADDSLILCRANGGEAQQLQTILQIYEECSGQV 969