BLASTX nr result
ID: Rehmannia26_contig00035084
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00035084
(336 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73049.1| hypothetical protein VITISV_009802 [Vitis vinifera] 64 6e-14
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 74 3e-13
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 65 1e-12
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 77 3e-12
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 68 5e-12
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 63 6e-12
emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera] 69 8e-12
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 75 1e-11
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 75 1e-11
emb|CAN75777.1| hypothetical protein VITISV_031053 [Vitis vinifera] 68 2e-11
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 74 2e-11
emb|CAN82540.1| hypothetical protein VITISV_015270 [Vitis vinifera] 70 3e-11
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 73 4e-11
emb|CAN77153.1| hypothetical protein VITISV_021905 [Vitis vinifera] 72 6e-11
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 71 6e-11
emb|CAN61376.1| hypothetical protein VITISV_011846 [Vitis vinifera] 60 6e-11
gb|ABG37650.2| CCHC-type integrase [Populus trichocarpa] 62 8e-11
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 72 1e-10
emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera] 72 1e-10
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 56 1e-10
>emb|CAN73049.1| hypothetical protein VITISV_009802 [Vitis vinifera]
Length = 220
Score = 63.9 bits (154), Expect(2) = 6e-14
Identities = 31/72 (43%), Positives = 46/72 (63%)
Frame = +3
Query: 42 STGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 221
S W+ DSG+ +HV + LGNL++ S Y + +L VGNG+ SI+ VG T+ P L S
Sbjct: 72 SDQSWYADSGAANHVIAELGNLSMKSDYHDENKLAVGNGNKLSITHVGPTEXPFL--SSQ 129
Query: 222 LTLKHVLFVPHV 257
L+++L VPH+
Sbjct: 130 XYLRNILLVPHI 141
Score = 38.9 bits (89), Expect(2) = 6e-14
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 266 DNHVFIEFHESYCLVKDQQPHQV 334
DN VF+EFH + CLVKD++ HQV
Sbjct: 154 DNKVFVEFHSNVCLVKDKENHQV 176
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 73.9 bits (180), Expect(2) = 3e-13
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = +3
Query: 39 SSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSK 218
+S WF+DSG+THH+T++ L + Y G +VVGNG + IS VG T FPS SK
Sbjct: 259 NSNTSWFVDSGATHHMTTDSNTLDVFDHYSGTGNVVVGNGQTLDISSVGHTSFPSRKSSK 318
Query: 219 ILTLKHVLFVPHVT 260
L L +VL VP +T
Sbjct: 319 SLHLANVLHVPQIT 332
Score = 26.2 bits (56), Expect(2) = 3e-13
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 257 YYKDNHVFIEFHESYCLVKDQQPHQV 334
+ +DN V +EF C VKD++ ++
Sbjct: 341 FTQDNDVILEFDSHCCFVKDKKSREI 366
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 65.5 bits (158), Expect(2) = 1e-12
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 51 DWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQF-PSLNPSKILT 227
+W+ DSG+THH+T NL NL S + ++ VGNG I +G T F S PSK L
Sbjct: 352 NWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLA 411
Query: 228 LKHVLFVPHVT 260
LK +L VP +T
Sbjct: 412 LKQLLHVPEIT 422
Score = 32.7 bits (73), Expect(2) = 1e-12
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 251 SCYYKDNHVFIEFHESYCLVKDQQPHQV 334
S + DNHVF EFH + C VKD V
Sbjct: 429 SKFAADNHVFFEFHPTSCFVKDPSTRTV 456
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/72 (47%), Positives = 49/72 (68%)
Frame = +3
Query: 42 STGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 221
++G+W +DSG+THH+TSNL NL LH PY G ++ + +GS IS GS P+ P++
Sbjct: 329 NSGNWLLDSGATHHLTSNLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPT--PTRS 386
Query: 222 LTLKHVLFVPHV 257
L LK VL+VP +
Sbjct: 387 LALKDVLYVPDI 398
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 68.2 bits (165), Expect(2) = 5e-12
Identities = 30/73 (41%), Positives = 47/73 (64%)
Frame = +3
Query: 54 WFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTLK 233
WF+D+G+THHVTS+L NL+LH+P+ G +++VGNG + G + P+ + L LK
Sbjct: 367 WFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGA--LLLK 424
Query: 234 HVLFVPHVTIKTI 272
+VL VP + +
Sbjct: 425 NVLHVPKIAANLV 437
Score = 28.1 bits (61), Expect(2) = 5e-12
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 266 DNHVFIEFHESYCLVKDQQPHQV 334
DN+ ++EF+ SY VKDQ+ +
Sbjct: 445 DNNAYVEFYPSYFAVKDQKTQAI 467
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 62.8 bits (151), Expect(2) = 6e-12
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +3
Query: 42 STGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 221
S +W+ DSG+++HVT N NL + + G+ Q+ VGNG+ SI +G ++F S SK
Sbjct: 365 SDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKP 424
Query: 222 LTLKHVLFVPHVT 260
L L H+L VP +T
Sbjct: 425 LLLNHLLHVPSIT 437
Score = 33.1 bits (74), Expect(2) = 6e-12
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2
Query: 251 SCYYKDNHVFIEFHESYCLVKDQ 319
S + KDN VF EFH C VKDQ
Sbjct: 444 SKFAKDNKVFFEFHSDSCFVKDQ 466
>emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera]
Length = 1092
Score = 69.3 bits (168), Expect(2) = 8e-12
Identities = 31/73 (42%), Positives = 52/73 (71%)
Frame = +3
Query: 33 ASSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNP 212
A+S+ G W +DS ++H++TS+L +L++HS Y+G+ ++V+G+G+ I+ +GST S P
Sbjct: 193 ATSTNGKWLLDSAASHNITSDLASLSIHSEYEGQDEVVLGDGTGLQIAHIGSTTLSS--P 250
Query: 213 SKILTLKHVLFVP 251
S+ L LK L VP
Sbjct: 251 SRSLMLKETLHVP 263
Score = 26.2 bits (56), Expect(2) = 8e-12
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 266 DNHVFIEFHESYCLVKDQ 319
DN+V IEFH + LVKD+
Sbjct: 278 DNNVTIEFHPFFYLVKDR 295
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 42 STGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 221
++G+W +DSG+THH+TS+L NL LH PY G ++ + +GS IS GS P+ P++
Sbjct: 329 NSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPT--PTRS 386
Query: 222 LTLKHVLFVPHV 257
L LK VL+VP +
Sbjct: 387 LALKDVLYVPDI 398
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 42 STGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 221
++G+W +DSG+THH+TS+L NL LH PY G ++ + +GS IS GS P+ P++
Sbjct: 329 NSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPT--PTRS 386
Query: 222 LTLKHVLFVPHV 257
L LK VL+VP +
Sbjct: 387 LALKDVLYVPDI 398
>emb|CAN75777.1| hypothetical protein VITISV_031053 [Vitis vinifera]
Length = 742
Score = 68.2 bits (165), Expect(2) = 2e-11
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = +3
Query: 42 STGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 221
S WF+DSG+THH+T++ L + Y +V+GNG + S VG T FPS SK
Sbjct: 139 SNSSWFVDSGATHHMTTDSNTLDVSDHYSSTGNVVLGNGQTLDRSNVGHTSFPSRKSSKS 198
Query: 222 LTLKHVLFVPHVT 260
L L +VL VP +T
Sbjct: 199 LYLTNVLHVPQIT 211
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 257 YYKDNHVFIEFHESYCLVKDQQPHQV 334
+ +DN V +EF C VKD++ ++
Sbjct: 220 FTQDNDVILEFDSHCCFVKDKKSREI 245
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 42 STGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 221
++G+W +DSG+THH+TS+L NL LH PY G ++ + +GS IS GS P+ P++
Sbjct: 329 NSGNWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSGSALLPT--PTRS 386
Query: 222 LTLKHVLFVPHV 257
L LK VL+VP +
Sbjct: 387 LDLKDVLYVPDI 398
>emb|CAN82540.1| hypothetical protein VITISV_015270 [Vitis vinifera]
Length = 499
Score = 70.1 bits (170), Expect(2) = 3e-11
Identities = 33/72 (45%), Positives = 51/72 (70%)
Frame = +3
Query: 36 SSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPS 215
+++T W +DSG++HHVTS+L NL+LHS YQG +++G+GS+ I+ GST P+ S
Sbjct: 291 NNTTSTWLLDSGASHHVTSDLSNLSLHSLYQGFHDIMIGDGSTLPITHTGSTTIPT--SS 348
Query: 216 KILTLKHVLFVP 251
+ L++VL VP
Sbjct: 349 RTFILQNVLCVP 360
Score = 23.5 bits (49), Expect(2) = 3e-11
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 266 DNHVFIEFHESYCLVKD 316
+NHVFIEF S VKD
Sbjct: 375 NNHVFIEFSLSAFQVKD 391
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +3
Query: 54 WFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTLK 233
W +DSG+THH+TS+L NL++H PY G ++ + +GS IS GS P+ PS+ L LK
Sbjct: 314 WVLDSGATHHLTSDLANLSMHQPYTGGEEVTIADGSGLPISHTGSALLPT--PSRSLALK 371
Query: 234 HVLFVPHVT 260
+L+VP+V+
Sbjct: 372 DILYVPNVS 380
>emb|CAN77153.1| hypothetical protein VITISV_021905 [Vitis vinifera]
Length = 809
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = +3
Query: 30 NASSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLN 209
N S +T W +DSG++HHVT++L NL+LH+PY G +++G+GSS I+ GST F + N
Sbjct: 17 NTSPTTPQWLLDSGASHHVTADLSNLSLHTPYTGFDDIMIGDGSSLPITHTGSTSFTTHN 76
Query: 210 PSKILTLKHVLFVP 251
S L +VL VP
Sbjct: 77 TS--FKLDNVLCVP 88
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 70.9 bits (172), Expect(2) = 6e-11
Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = +3
Query: 39 SSTGD--WFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNP 212
S+ GD W+MD+G+THH+T NL L H+P+ G +++VGNG+ +IS +G + S+
Sbjct: 293 STVGDESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISNIGHSTISSV-- 350
Query: 213 SKILTLKHVLFVPHVTIKTI 272
S+ L LK++L VP +T I
Sbjct: 351 SRSLNLKNILHVPQLTTNLI 370
Score = 21.6 bits (44), Expect(2) = 6e-11
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 266 DNHVFIEFHESYCLVKDQ 319
DN+V +EF + +VKDQ
Sbjct: 378 DNNVTVEFFTNGFVVKDQ 395
>emb|CAN61376.1| hypothetical protein VITISV_011846 [Vitis vinifera]
Length = 675
Score = 60.5 bits (145), Expect(2) = 6e-11
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +3
Query: 36 SSSTGD--WFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLN 209
S + GD WF+D+ +THH+TS+L NLT+H+P+ +++VG+G SI+ +G +F +
Sbjct: 5 SXTMGDTYWFLDTKATHHLTSDLNNLTIHNPFTXGDKVIVGDGKXLSIANIG--KFSLAS 62
Query: 210 PSKILTLKHVLFVPHVTIKTI 272
S L VL P +T +
Sbjct: 63 SSSSLFFNDVLHFPSITTNLV 83
Score = 32.0 bits (71), Expect(2) = 6e-11
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 257 YYKDNHVFIEFHESYCLVKDQQ 322
+Y +N FIEFH S+ +VKDQ+
Sbjct: 88 FYSNNGTFIEFHSSHFVVKDQE 109
>gb|ABG37650.2| CCHC-type integrase [Populus trichocarpa]
Length = 441
Score = 62.4 bits (150), Expect(2) = 8e-11
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 6 FADNTAGLNASSSTGD--WFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISK 179
F++ TA ++S D W +DS ++H++T +L NL++HS Y G ++V+G+GS +S
Sbjct: 315 FSEPTANCVSTSHPKDTKWLIDSAASHNITGDLSNLSVHSEYDGTNEVVLGDGSGLRVSH 374
Query: 180 VGSTQFPSLNPSKILTLKHVLFVPHV 257
+GS F S P++ LK L VP +
Sbjct: 375 IGSLVFHS--PTRTFHLKDTLCVPSI 398
Score = 29.6 bits (65), Expect(2) = 8e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 269 NHVFIEFHESYCLVKDQ 319
N+VF+EFH Y LVKDQ
Sbjct: 412 NNVFVEFHPLYFLVKDQ 428
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +3
Query: 21 AGLNASSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFP 200
A + + + +W +DSG+THH+TS+L NL+LH PY G + + +GS SIS GS
Sbjct: 277 AAIASPYNANNWLLDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGSALIS 336
Query: 201 SLNPSKILTLKHVLFVPHV 257
+ PS+ L L VL+VP++
Sbjct: 337 T--PSRSLALTDVLYVPNI 353
>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
Length = 424
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +3
Query: 54 WFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTLK 233
W +DSG++HHVT++L NL LHSP+ G ++++GNGS IS GST + PS TL
Sbjct: 289 WLLDSGASHHVTTDLHNLALHSPFDGTDEIMIGNGSGLPISHTGSTSLTT--PSHSFTLS 346
Query: 234 HVLFVP 251
+VL+VP
Sbjct: 347 NVLWVP 352
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +3
Query: 51 DWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTL 230
+W+ +SG+++HVT N N+ + + + Q+ VGNG SI +G +F S SK L L
Sbjct: 311 NWYPNSGASNHVTPNPANMMKSAEFARQNQVHVGNGIGLSIKHIGQFEFLSHFSSKPLLL 370
Query: 231 KHVLFVPHVT 260
H+L+VP +T
Sbjct: 371 NHLLYVPSIT 380
Score = 35.4 bits (80), Expect(2) = 1e-10
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 251 SCYYKDNHVFIEFHESYCLVKDQQPHQV 334
S + KDN VF EFH C VKDQ P V
Sbjct: 387 SKFAKDNKVFFEFHSDSCFVKDQGPAPV 414