BLASTX nr result

ID: Rehmannia26_contig00035082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00035082
         (428 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006489961.1| PREDICTED: uncharacterized protein LOC102608...    56   5e-11
ref|XP_002510892.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    50   1e-09
ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625...    45   2e-09
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    58   9e-09
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...    59   1e-08
ref|XP_002512628.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    54   4e-08
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    53   5e-08
ref|XP_006483704.1| PREDICTED: uncharacterized protein LOC102620...    61   2e-07
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    60   2e-07
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    60   3e-07
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A...    47   4e-07

>ref|XP_006489961.1| PREDICTED: uncharacterized protein LOC102608276 [Citrus sinensis]
          Length = 190

 Score = 56.2 bits (134), Expect(2) = 5e-11
 Identities = 31/83 (37%), Positives = 45/83 (54%)
 Frame = +2

Query: 158 IGCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILVESDSWSVI 337
           +GC++R+S G F+ A      G      AE   +REALSW+KK      +++E D   V 
Sbjct: 108 LGCVVRNSEGIFLTAKCDRFLGSFGAREAEAFGVREALSWLKK-LQFPRVIIEIDCLQVF 166

Query: 338 KAVRGNLTENTYFGGIVEDCRSL 406
           KA+  N +    FG I+E+CR L
Sbjct: 167 KALTENHSSPNGFGLIIEECRFL 189



 Score = 36.6 bits (83), Expect(2) = 5e-11
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LLFQWEC----AQVTEVGDWKLQAKDGAIK*QLPEDGWLK*NVDAALFSQTHKIGL 161
           LL+QW+     A  T+V +    +  GA+  + P  GW+K NVDAA+FS    +GL
Sbjct: 55  LLYQWQSLRKQAMFTDVDE--SSSVHGAVCWKRPHVGWVKCNVDAAVFSSQAMVGL 108


>ref|XP_002510892.1| conserved hypothetical protein [Ricinus communis]
           gi|223550007|gb|EEF51494.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 192

 Score = 71.2 bits (173), Expect(2) = 1e-10
 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +2

Query: 158 IGCILRDSNGAFIAAMQGAESGI-LEPLIAEGISLREALSWIKKHFASANILVESDSWSV 334
           +GCI+RD +G FIAA +     + L P IAE +S RE LSW+K      N++V+SDS  +
Sbjct: 66  LGCIIRDDSGRFIAAAKHNSMRVRLIPSIAEALSCREGLSWLKSLLGQHNVIVDSDSQVL 125

Query: 335 IKAVRGNLTENTYFGGIVEDCRSLLVDL 418
           I A+  + ++ + FG +V+DC S+  D+
Sbjct: 126 IHAINNSRSDLSEFGLVVDDCISIAKDI 153



 Score = 20.4 bits (41), Expect(2) = 1e-10
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 102 GWLK*NVDAALFSQTHKIGL 161
           G  K   DAA+F +++K+GL
Sbjct: 47  GPCKMRCDAAVFVESNKLGL 66


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 50.4 bits (119), Expect(2) = 1e-09
 Identities = 27/83 (32%), Positives = 42/83 (50%)
 Frame = +2

Query: 161 GCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILVESDSWSVIK 340
           G  +RD  G F+ A      G   P  AE + LR+A+ W+ +    +N+ +E D   V+ 
Sbjct: 83  GMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQ-LELSNVQLELDCKLVVD 141

Query: 341 AVRGNLTENTYFGGIVEDCRSLL 409
           ++         FG I++DCRSLL
Sbjct: 142 SIYDKNNNQAEFGSIIDDCRSLL 164



 Score = 37.4 bits (85), Expect(2) = 1e-09
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 6   LLFQWECAQVTEVGDWKLQAKDGAIK*QLPEDGWLK*NVDAALFSQTHKIG 158
           LLFQW+ A+ +     +   +D  I  Q P  G+LK NVDAA+FS+ ++ G
Sbjct: 32  LLFQWQAARNSATTQVQQSPQD-TIAWQPPAAGFLKCNVDAAIFSEQNRFG 81


>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
          Length = 412

 Score = 45.1 bits (105), Expect(2) = 2e-09
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = +2

Query: 158 IGCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKK 286
           IGC++R+S G F+AA   + +GI     AE + +REALSW+K+
Sbjct: 354 IGCVIRNSQGGFVAARCVSVAGIFGAREAEALGIREALSWMKE 396



 Score = 42.4 bits (98), Expect(2) = 2e-09
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +3

Query: 9   LFQWECA--QVTEVGDWKLQAKDGAIK*QLPEDGWLK*NVDAALFSQTHKIGL 161
           L+QW+ A  QV +V D   +   GA+  + P+ GW+K NVDAA+F    KIG+
Sbjct: 302 LYQWQAAKQQVFDVNDDTHRLVHGALCWEQPKFGWVKCNVDAAVFESQGKIGI 354


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 57.8 bits (138), Expect(2) = 9e-09
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +2

Query: 161 GCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILV-ESDSWSVI 337
           G I ++ +G F AA  G  SG L+P +AE +SLRE L W+K      N +V ESD  +++
Sbjct: 155 GFIFQNDSGTFRAATNGLISGPLDPQVAEALSLREDLCWVKG--LDLNYVVSESDCLTLV 212

Query: 338 KAVRGNLTENTYFGGIVEDCRSLLVDL 418
            AV      ++ FG ++ DCRS L ++
Sbjct: 213 NAVNKVGVNSSLFGLLIGDCRSFLKEM 239



 Score = 27.3 bits (59), Expect(2) = 9e-09
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 93  PEDGWLK*NVDAALFSQTHKIG 158
           P +GWLK N+D  +F   +++G
Sbjct: 132 PVEGWLKCNIDVVVFVANNRLG 153


>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score = 59.3 bits (142), Expect(2) = 1e-08
 Identities = 34/82 (41%), Positives = 50/82 (60%)
 Frame = +2

Query: 161 GCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILVESDSWSVIK 340
           G ++RDSN AF+AA   +  G      AE + +REALSWIK+    +N+ +E D  +V  
Sbjct: 307 GNVIRDSNCAFMAARCCSIPGRFSARDAEALGVREALSWIKQ-LQLSNVTIEMDCLTVYN 365

Query: 341 AVRGNLTENTYFGGIVEDCRSL 406
           A+  NL+  + F  I+EDCR+L
Sbjct: 366 ALVNNLSGPSSFSLIIEDCRAL 387



 Score = 25.0 bits (53), Expect(2) = 1e-08
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 9   LFQWECAQVTE-VGDWKLQAKDGAIK*QLPEDGWLK*NVDAALFSQTHKIG 158
           LFQW+  +  + +         GAI  + P  G LK NVD ALF+    IG
Sbjct: 255 LFQWQLVRKQQFLFSQPSPIGHGAICWEPPVAGRLKCNVDVALFAFRGYIG 305


>ref|XP_002512628.1| conserved hypothetical protein [Ricinus communis]
           gi|223548589|gb|EEF50080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = +2

Query: 158 IGCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSW-IKKHFASANILVESDSWSV 334
           +  ++ DSNG F+A M  A  G+ EP +AE ++L+EA+ W I+  F+   ++ ESDS   
Sbjct: 87  MAAVVSDSNGTFVACMAHAVLGLFEPRLAEAVALKEAIRWAIQMRFSL--VVFESDSKIA 144

Query: 335 IKAVRGNLTENTYFGGIVEDCRSLL 409
           + A+R    + + FG I+++CRSLL
Sbjct: 145 VDAIRSLAADWSEFGIIIDECRSLL 169


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 54.3 bits (129), Expect(2) = 4e-08
 Identities = 29/89 (32%), Positives = 47/89 (52%)
 Frame = +2

Query: 158 IGCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILVESDSWSVI 337
           +G ILR+  G+         +G+  P  AE + LREA  W+ +   S N++VE D+  V 
Sbjct: 381 LGVILRNEFGSVXGCYSKVVNGVSSPKXAEALGLREAARWLLELRVS-NVIVELDAKGVY 439

Query: 338 KAVRGNLTENTYFGGIVEDCRSLLVDLPF 424
            +      + + FG +++DCRSL +D  F
Sbjct: 440 DSFYSKALDRSEFGMLIQDCRSLFLDQNF 468



 Score = 28.5 bits (62), Expect(2) = 4e-08
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 78  IK*QLPEDGWLK*NVDAALFSQTHKIGLVV 167
           +K   P  G LK NVDA +FS+   IGL V
Sbjct: 354 VKWSKPSPGMLKCNVDAXIFSKHQTIGLGV 383


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 52.8 bits (125), Expect(2) = 5e-08
 Identities = 30/87 (34%), Positives = 44/87 (50%)
 Frame = +2

Query: 158 IGCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILVESDSWSVI 337
           IG + RD  G F+            P + E + +RE LSWI +   S  I+VE+D   V+
Sbjct: 687 IGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRS-RIVVETDCLRVV 745

Query: 338 KAVRGNLTENTYFGGIVEDCRSLLVDL 418
           +A++     NT FG I+ DC  +L  L
Sbjct: 746 QAIQHKSCPNTSFGFIIVDCLDVLQHL 772



 Score = 29.6 bits (65), Expect(2) = 5e-08
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 81  K*QLPEDGWLK*NVDAALFSQTHKIGLV 164
           K Q P+ GW+K NVD A+F     IG V
Sbjct: 663 KWQKPDYGWIKINVDGAVFPDKGAIGAV 690


>ref|XP_006483704.1| PREDICTED: uncharacterized protein LOC102620092 [Citrus sinensis]
          Length = 340

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +2

Query: 71  WCYKVTITRRWMVKVKRGCGFIFSNS*NW-IGCILRDSNGAFIAAMQGAESGILEPLIAE 247
           W   V++T  + +KV      I S+   + +G ++R +   FIAA      G +E   AE
Sbjct: 185 WFRLVSLTSLFWLKVGSVDAAITSSRGMFSLGAVIRSAQCDFIAAKSDFFPGRVEAREAE 244

Query: 248 GISLREALSWIKKHFASANILVESDSWSVIKAVRGNLTENTYFGGIVEDCRSLLVDL 418
            I +REALSW+KK FA  +++++ DS  V  A+    +    FG I++DCR+L+  L
Sbjct: 245 AIEVREALSWLKK-FAFYSVILDMDSLQVFNALHDKTSYFNGFGSIIDDCRALVRSL 300


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/83 (34%), Positives = 46/83 (55%)
 Frame = +2

Query: 161 GCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILVESDSWSVIK 340
           G ++RDS G+F+    G+  G+    +AE I LREA+ W+      +N++ E D+  V+ 
Sbjct: 194 GMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLS-LGRSNVIFEYDAKVVVD 252

Query: 341 AVRGNLTENTYFGGIVEDCRSLL 409
           AV     +   FG ++ DCR LL
Sbjct: 253 AVLSGAADLFEFGAVIADCRLLL 275


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = +2

Query: 134 IFSNS*NW-IGCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANIL 310
           IFSN  +  +GC+++D  G F+ AM  + +G   P IAEG++++EALSW +      N++
Sbjct: 44  IFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDR-QLLNVV 102

Query: 311 VESDSWSVIKAVRGNLTENTYFGGIVEDCRSL 406
            E D   +++A+    T+ +  G I++DC+ L
Sbjct: 103 FELDCLHIVEALLRKGTDRSSLGLIIKDCKLL 134


>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 459

 Score = 47.0 bits (110), Expect(2) = 4e-07
 Identities = 27/83 (32%), Positives = 44/83 (53%)
 Frame = +2

Query: 158 IGCILRDSNGAFIAAMQGAESGILEPLIAEGISLREALSWIKKHFASANILVESDSWSVI 337
           +G ++RD +G F+AA+     G   P  AE +S+REALS +K     + ++VE+D     
Sbjct: 330 LGSVIRDESGKFVAALCCHIRGNYSPRDAEVLSIREALSLLKS-MKLSKVIVETDCLQAF 388

Query: 338 KAVRGNLTENTYFGGIVEDCRSL 406
            A+         FG +V DC+ +
Sbjct: 389 NALVDRKCPLNSFGSLVLDCKCI 411



 Score = 32.3 bits (72), Expect(2) = 4e-07
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +3

Query: 6   LLFQWECAQVTEVGDWKLQAKDGAIK*QLPEDGWLK*NVDAALFSQTHKIGL 161
           L++Q +C    ++ +    A  GA+    P  GWLK N+DA +F+   ++GL
Sbjct: 282 LVWQGKCDTTKQIVN---AAGVGAVAWSPPRVGWLKCNIDATVFANEGRVGL 330


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