BLASTX nr result

ID: Rehmannia26_contig00034923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00034923
         (608 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526851.1| conserved hypothetical protein [Ricinus comm...    87   3e-15
ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ...    59   8e-07
emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   1e-06
emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   5e-06
ref|NP_064028.1| orf120 gene product (mitochondrion) [Beta vulga...    56   7e-06
ref|YP_004222271.1| hypothetical protein BevumaM_p032 [Beta vulg...    56   9e-06
dbj|BAD66760.1| orf120b [Beta vulgaris subsp. vulgaris] gi|54606...    56   9e-06

>ref|XP_002526851.1| conserved hypothetical protein [Ricinus communis]
           gi|223533750|gb|EEF35482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +2

Query: 5   TKISIDNRNPIWIPVKYERLASFCYICGHLGHTKRDCETVDDRDEFLNLSEDVLPFGDWI 184
           TKI++ +   +W+  +YERL SFCY+CG LGH  RDC++  + D +  + E +LPFGDW+
Sbjct: 50  TKIAMGSNKDMWVFFRYERLPSFCYVCGCLGHVMRDCDSRTEDDGYDAMDEKLLPFGDWM 109

Query: 185 RASPMKHARVTVDGEKK 235
           RASP K  +V +  E K
Sbjct: 110 RASPFKRTKVIIQDESK 126


>ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
           gi|355478601|gb|AES59804.1| hypothetical protein
           MTR_1g026010 [Medicago truncatula]
          Length = 352

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
 Frame = +2

Query: 8   KISIDNRNPIWIPVKYERLASFCYICGHLGHTKRDC--ETVDDRDEFLNLSEDVLPFGDW 181
           K++ID RNP+    +   L +FCY CG +GH  ++C  ET  D + + ++ E    +G W
Sbjct: 165 KVAIDLRNPL---KRGTVLPNFCYKCGRIGHQMKECEEETGQDSEGYTDVEEQDQAYGSW 221

Query: 182 IRASPMKHARVTVDGEKKEDSNEIRRRLFQKSLQQKNMTWNQHAENKAHDNAPDIPQGVS 361
           +RASP+   +V ++ +K+ ++    + LF  +   K     +   +KA      +     
Sbjct: 222 MRASPL--PKVQLEFKKEPNTGTCSKSLFSSTSSSKCSEAGEEKTSKAL-----VADEAE 274

Query: 362 LLINDLQKVIVNGKSQTSEKS 424
             + + Q V ++ +S+ + K+
Sbjct: 275 TPVGEKQNVALDARSEETSKA 295


>emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 24/155 (15%)
 Frame = +2

Query: 47  VKYERLASFCYICGHLGHTKRDCETVDDRDEFLNLSEDVLPFGDWIRASPMKHA------ 208
           VKYER   FC+ CG +GH  +DCE  D  D      + V+ +G WI+ASP K A      
Sbjct: 223 VKYERPPLFCFYCGKVGHGTKDCEEDDAED------KGVVKYGGWIKASPWKVADAGEKG 276

Query: 209 ------------------RVTVDGEKKEDSNEIRRRLFQKSLQQKNMTWNQHAENKAHDN 334
                             +  V  EKKE  + +  +L    LQ+K +   Q  +     N
Sbjct: 277 GGRANESSCARTLFITKPKKPVGVEKKESMSAVVEKLTSCVLQEKAI--EQGVDTDYISN 334

Query: 335 APDIPQGVSLLINDLQKVIVNGKSQTSEKSSADKN 439
              +P GV++++ D    + N   +  E++ ++K+
Sbjct: 335 DRMMPSGVNMIMED---AVANCGEEVIEQNESNKS 366


>emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
 Frame = +2

Query: 8   KISIDNRNPIWIPVKYERLASFCYICGHLGHTKRDCETVDDRDEFLNLSEDVLPFGDWIR 187
           + ++ N     + +KYERL +FC++CG +GH  RDC  V + D+     E    +G W+R
Sbjct: 184 RFALKNGVSALVEIKYERLPTFCFLCGVIGHIGRDCVEVFEEDK-----EGESQWGAWLR 238

Query: 188 ASPMKHARVTVDGEKKEDSNEIRRRLFQKSLQQKNMTWNQHAE--NKAHDNAPDIP 349
           ASP +  R  ++ E+K      R   F + ++++  + N H +  N  HD  P  P
Sbjct: 239 ASP-RRGRQKMEEEEKCFLKGARALEFVR-IEKEPTSRNMHNDLRNVEHDCPPTKP 292


>ref|NP_064028.1| orf120 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|346683146|ref|YP_004842078.1| hypothetical protein
           BemaM_p030 [Beta macrocarpa] gi|9049329|dbj|BAA99339.1|
           orf120 [Beta vulgaris subsp. vulgaris]
           gi|345500064|emb|CBX24880.1| hypothetical protein [Beta
           macrocarpa]
          Length = 120

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 28/81 (34%), Positives = 41/81 (50%)
 Frame = +2

Query: 8   KISIDNRNPIWIPVKYERLASFCYICGHLGHTKRDCETVDDRDEFLNLSEDVLPFGDWIR 187
           K+ +      +  VKYE+L  FCY CG LGH  +DC      DEF         +G+W++
Sbjct: 41  KLKMRGGQEYFAEVKYEKLPLFCYYCGKLGHGTKDC------DEFFGEESPQKKYGEWLK 94

Query: 188 ASPMKHARVTVDGEKKEDSNE 250
           ASP K      +G+K+E   +
Sbjct: 95  ASPWKFRN---EGDKQEPKGQ 112


>ref|YP_004222271.1| hypothetical protein BevumaM_p032 [Beta vulgaris subsp. maritima]
           gi|317905706|emb|CBJ14095.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439786|emb|CBJ17504.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 120

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = +2

Query: 47  VKYERLASFCYICGHLGHTKRDCETVDDRDEFLNLSEDVLPFGDWIRASPMKHARVTVDG 226
           VKYE+L  FCY CG LGH  +DC      DEF         +G+W++ASP K      +G
Sbjct: 54  VKYEKLPLFCYYCGKLGHGTKDC------DEFFGEESPQKKYGEWLKASPWKFRN---EG 104

Query: 227 EKKEDSNE 250
           +K+E   +
Sbjct: 105 DKQEPKGQ 112


>dbj|BAD66760.1| orf120b [Beta vulgaris subsp. vulgaris] gi|54606775|dbj|BAD66798.1|
           orf120b [Beta vulgaris subsp. vulgaris]
           gi|384939204|emb|CBL52051.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 120

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = +2

Query: 47  VKYERLASFCYICGHLGHTKRDCETVDDRDEFLNLSEDVLPFGDWIRASPMKHARVTVDG 226
           VKYE+L  FCY CG LGH  +DC      DEF         +G+W++ASP K      +G
Sbjct: 54  VKYEKLPLFCYYCGKLGHGTKDC------DEFFGEESPQKKYGEWLKASPWKFRN---EG 104

Query: 227 EKKEDSNE 250
           +K+E   +
Sbjct: 105 DKQEPKGQ 112


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