BLASTX nr result
ID: Rehmannia26_contig00034808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00034808
(528 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 236 3e-60
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 234 9e-60
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 234 9e-60
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 232 5e-59
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 232 5e-59
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 231 6e-59
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 222 4e-56
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 221 8e-56
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 215 4e-54
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 215 4e-54
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 211 1e-52
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 205 5e-51
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 204 1e-50
ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III s... 204 1e-50
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 203 2e-50
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 203 2e-50
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 202 3e-50
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 202 3e-50
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 198 6e-49
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 196 3e-48
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 236 bits (601), Expect = 3e-60
Identities = 111/164 (67%), Positives = 133/164 (81%)
Frame = -1
Query: 492 MARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDN 313
M RAQ ++Q TKQPY EDVGPR+I+SI+FS FS +E+LK EVEV G YY+ TKKPI N
Sbjct: 1 MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN 60
Query: 312 GLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCS 133
GLLDP MGP NK G C+TC+G F ECPGH GYL LALPVYNVGYL T+VDI+KCICK CS
Sbjct: 61 GLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 132 RVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+LL++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG +
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQ 164
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 234 bits (597), Expect = 9e-60
Identities = 110/164 (67%), Positives = 133/164 (81%)
Frame = -1
Query: 492 MARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDN 313
M R Q ++Q TKQPY EDVGPR+I+SI+FS FS +E+LK+ EVEV G YY+ TKKPI N
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 312 GLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCS 133
GLLDP MGP NK G C+TC+G F ECPGH GYL LALPVYNVGYL T+VDI+KCICK CS
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 132 RVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+LL++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG +
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQ 164
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 234 bits (597), Expect = 9e-60
Identities = 110/164 (67%), Positives = 133/164 (81%)
Frame = -1
Query: 492 MARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDN 313
M R Q ++Q TKQPY EDVGPR+I+SI+FS FS +E+LK+ EVEV G YY+ TKKPI N
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 312 GLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCS 133
GLLDP MGP NK G C+TC+G F ECPGH GYL LALPVYNVGYL T+VDI+KCICK CS
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 132 RVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+LL++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG +
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQ 164
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 232 bits (591), Expect = 5e-59
Identities = 107/157 (68%), Positives = 128/157 (81%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
IQFTK+PY EDVGPR+IESI+F+ FS +E+ K EV+V RG YYD +KPI+NGLLDP M
Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GPANK G C TC G F +CPGHCGYL LALPVYNVGYL+TIVDI+KCICK CSRVLL+EK
Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+ +L+KMR+ K E LKK E++K +V+KC AMA SK
Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSK 161
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 232 bits (591), Expect = 5e-59
Identities = 107/157 (68%), Positives = 128/157 (81%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
IQFTK+PY EDVGPR+IESI+F+ FS +E+ K EV+V RG YYD +KPI+NGLLDP M
Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GPANK G C TC G F +CPGHCGYL LALPVYNVGYL+TIVDI+KCICK CSRVLL+EK
Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+ +L+KMR+ K E LKK E++K +V+KC AMA SK
Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSK 161
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 231 bits (590), Expect = 6e-59
Identities = 109/156 (69%), Positives = 123/156 (78%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
+Q TKQPY EDVG RRIESI FST SG+EVLKT VEV +G YYD KKP+ NGLLD M
Sbjct: 1 LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GP NK C TC+G F ECPGH GYLALALPVYNVGYL+ IVDI+KCICK CSRVLLEEK
Sbjct: 61 GPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEK 120
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGS 4
E FL+KMRN + EPLKK ++ K +VK+CN+ AGS
Sbjct: 121 EHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGS 156
>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 232
Score = 222 bits (566), Expect = 4e-56
Identities = 99/154 (64%), Positives = 128/154 (83%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
I FTKQP+ EDVGPRRI+S+QF+ S +E+ K EV+V +G YYD +KP+++GLLDP M
Sbjct: 11 ILFTKQPFVEDVGPRRIKSMQFTVQSASEISKMAEVQVWKGQYYDPNRKPVEDGLLDPRM 70
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GPANK C TC+G+F++CPGH GYL LALPVYNVGYL+TI+DI+KCICK CSR+LL+EK
Sbjct: 71 GPANKFSECATCHGRFSDCPGHYGYLKLALPVYNVGYLSTILDILKCICKSCSRILLDEK 130
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMA 10
R+ FL+KMR++K EPLKK E++K +VKKCN+ A
Sbjct: 131 LRKDFLKKMRSSKMEPLKKGELMKKIVKKCNSKA 164
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 221 bits (563), Expect = 8e-56
Identities = 105/162 (64%), Positives = 129/162 (79%)
Frame = -1
Query: 486 RAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGL 307
RAQ I +TKQPY EDVGPRRI+SIQFST SG+++LK E +V G YYD KK I GL
Sbjct: 4 RAQDII-YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGL 62
Query: 306 LDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRV 127
LD MG NK G C+TC G F +CPGH GYL L LPVYNVGYL+TI+DI+KCICK CSRV
Sbjct: 63 LDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRV 122
Query: 126 LLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
L++EK R+++L++MRN +TEPLKKNE++K +VKKC++MA SK
Sbjct: 123 LVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSK 164
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 215 bits (548), Expect = 4e-54
Identities = 99/162 (61%), Positives = 126/162 (77%)
Frame = -1
Query: 495 QMARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPID 316
Q+ + +I FTKQPY EDVGPR+IESIQFS S +E++K EV+V +G YY + PI+
Sbjct: 4 QLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIE 63
Query: 315 NGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKC 136
GLLDP MGPANK C TC+G F+ CPGH GYL LALPVYNVGYL+TI+DI+KCICK C
Sbjct: 64 GGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYC 123
Query: 135 SRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMA 10
SR+LLEEK + +L+KMRN K E L+K +++K++VKKC+ MA
Sbjct: 124 SRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA 165
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 215 bits (548), Expect = 4e-54
Identities = 97/156 (62%), Positives = 127/156 (81%)
Frame = -1
Query: 468 QFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHMG 289
+FTK+PY EDVGPR+I+SIQFS S +E+ K EV+V + YYD +PI+ GLLDP MG
Sbjct: 4 KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63
Query: 288 PANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEKE 109
PANK G C TC+G FA+CPGH GYL+LALPVYNVGYL+TI+DI+KCICK CSR++L+EK
Sbjct: 64 PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123
Query: 108 RQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+ +L++MR+ K + LKK +I+K++VKKC+AMA SK
Sbjct: 124 CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSK 159
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 211 bits (536), Expect = 1e-52
Identities = 98/161 (60%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = -1
Query: 492 MARAQA-AIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPID 316
M RAQ + FTKQPY EDVGPR+I+S+QF+TFSG E+ K EV+V +G YYD T+KPID
Sbjct: 1 MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 60
Query: 315 NGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKC 136
GLLDP MGPANK C TC+ F +CPGH GY+ LALPV+NVGY TI++I+KCICK C
Sbjct: 61 GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 120
Query: 135 SRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAM 13
SR+LLEEK + FL+KMRN K E L+K +++K ++KKC+ +
Sbjct: 121 SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTL 161
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 205 bits (522), Expect = 5e-51
Identities = 99/177 (55%), Positives = 126/177 (71%), Gaps = 15/177 (8%)
Frame = -1
Query: 495 QMARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPID 316
Q+ + +I FTKQPY EDVGPR+IESIQFS S +E++K EV+V +G YY + PI+
Sbjct: 4 QLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIE 63
Query: 315 NGLLDPHM---------------GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGY 181
GLLDP M GPANK C TC+G F+ CPGH GYL LALPVYNVGY
Sbjct: 64 GGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGY 123
Query: 180 LNTIVDIMKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMA 10
L+TI+DI+KCICK CSR+LLEEK + +L+KMRN K E L+K +++K++VKKC+ MA
Sbjct: 124 LSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA 180
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 204 bits (518), Expect = 1e-50
Identities = 93/157 (59%), Positives = 115/157 (73%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
I+FTKQPY EDVGP +I+SI FS FS E++K EV+V R YY+ KP++ GLLDP M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRM 66
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GP NK C TC+ F CPGH GYL L LPVYNVG+LN I+DI+KCICK+CS +L++EK
Sbjct: 67 GPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEK 126
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+ L+KMRN K EPLKK E+ K VVKKC+ MA +
Sbjct: 127 LYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMASQR 163
>ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like,
partial [Cucumis sativus]
Length = 286
Score = 204 bits (518), Expect = 1e-50
Identities = 97/161 (60%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
Frame = -1
Query: 492 MARAQA-AIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPID 316
M RAQ + FTKQPY EDVGPR+I +QF+TFSG E+ K EV+V +G YYD T+KPID
Sbjct: 1 MNRAQVEGLVFTKQPYIEDVGPRKI--MQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 58
Query: 315 NGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKC 136
GLLDP MGPANK C TC+ F +CPGH GY+ LALPV+NVGY TI++I+KCICK C
Sbjct: 59 GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 118
Query: 135 SRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAM 13
SR+LLEEK + FL+KMRN K E L+K +++K ++KKC+ +
Sbjct: 119 SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTL 159
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 203 bits (516), Expect = 2e-50
Identities = 95/157 (60%), Positives = 114/157 (72%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
I+FTK+PY EDVGP +I+SI FS S EV+K EV+V G YDH+ KP +NGLLDP M
Sbjct: 7 IEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRM 66
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GP NK C TC G F CPGH GYL L LPVYNVGY N I+DI+KCICK+CS +LL+EK
Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEK 126
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+ L+KMRN + EPLKK E+ K VVKKC+ MA +
Sbjct: 127 LYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQR 163
>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1376
Score = 203 bits (516), Expect = 2e-50
Identities = 95/157 (60%), Positives = 114/157 (72%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
I+FTK+PY EDVGP +I+SI FS S EV+K EV+V G YDH+ KP +NGLLDP M
Sbjct: 7 IEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRM 66
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GP NK C TC G F CPGH GYL L LPVYNVGY N I+DI+KCICK+CS +LL+EK
Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEK 126
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+ L+KMRN + EPLKK E+ K VVKKC+ MA +
Sbjct: 127 LYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQR 163
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 202 bits (515), Expect = 3e-50
Identities = 94/157 (59%), Positives = 119/157 (75%)
Frame = -1
Query: 492 MARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDN 313
MAR + ++ TK+P+ EDVG RRI+SI+FS FSG EV ++ EV+V Y+H KP+ N
Sbjct: 1 MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60
Query: 312 GLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCS 133
GLLD MG ANK+G C TC+G FAECPGH GYL LALPV+NVG+ N I+D++KCICK CS
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120
Query: 132 RVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKC 22
RVLL EK+R FL+KMRN K +PL+K+ I+K V KC
Sbjct: 121 RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC 157
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 202 bits (515), Expect = 3e-50
Identities = 94/157 (59%), Positives = 119/157 (75%)
Frame = -1
Query: 492 MARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDN 313
MAR + ++ TK+P+ EDVG RRI+SI+FS FSG EV ++ EV+V Y+H KP+ N
Sbjct: 1 MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60
Query: 312 GLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCS 133
GLLD MG ANK+G C TC+G FAECPGH GYL LALPV+NVG+ N I+D++KCICK CS
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120
Query: 132 RVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKC 22
RVLL EK+R FL+KMRN K +PL+K+ I+K V KC
Sbjct: 121 RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC 157
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 198 bits (504), Expect = 6e-49
Identities = 93/157 (59%), Positives = 112/157 (71%)
Frame = -1
Query: 471 IQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDNGLLDPHM 292
I+FTKQPY EDVGP +I+SI FS S EV+K EV+V + YY+ KP +NGLLD M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARM 66
Query: 291 GPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCSRVLLEEK 112
GP NK C TC G F CPGH GYL L LPVYNVG+ N I+DI+KCICK+CS +LL+EK
Sbjct: 67 GPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEK 126
Query: 111 ERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSK 1
+ L+KMRN K EPLKK E+ K VVKKC+ MA +
Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQR 163
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 196 bits (498), Expect = 3e-48
Identities = 91/157 (57%), Positives = 117/157 (74%)
Frame = -1
Query: 492 MARAQAAIQFTKQPYAEDVGPRRIESIQFSTFSGTEVLKTGEVEVSRGGYYDHTKKPIDN 313
MAR + ++ TK+P+ ED G RRI+SI+FS FSG EV ++ EV+V Y+ +P+ N
Sbjct: 1 MARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQEMRPVPN 60
Query: 312 GLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCICKKCS 133
GLLD MG ANK+G C TC+G FAECPGH GYL LALPV+NVG+ N I+D++KCICK CS
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCS 120
Query: 132 RVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKC 22
RVLL EK+R FL+KMRN K +PL+K+ I+K V KC
Sbjct: 121 RVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC 157