BLASTX nr result

ID: Rehmannia26_contig00034796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00034796
         (574 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...    45   3e-07
emb|CAN74164.1| hypothetical protein VITISV_026444 [Vitis vinifera]    57   3e-06

>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score = 45.1 bits (105), Expect(2) = 3e-07
 Identities = 22/29 (75%), Positives = 22/29 (75%)
 Frame = +3

Query: 3   KKLRPRTISVYFIRYAERSKGC*FYCLSH 89
           KKL PRTIS YFI YAERSKG  FYC  H
Sbjct: 639 KKLDPRTISGYFIGYAERSKGYRFYCPHH 667



 Score = 35.4 bits (80), Expect(2) = 3e-07
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +2

Query: 92  TRFVEFRNAKFLEYDLISGSGQ 157
           TR VE RNAKF+E DLISGS Q
Sbjct: 669 TRIVESRNAKFIENDLISGSDQ 690


>emb|CAN74164.1| hypothetical protein VITISV_026444 [Vitis vinifera]
          Length = 689

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/60 (51%), Positives = 36/60 (60%)
 Frame = +3

Query: 3   KKLRPRTISVYFIRYAERSKGC*FYCLSHRLDLSNLEMQNFLNMT*SVGVVNFLDIIFDI 182
           KKL PRTIS YFIRYAE+SKG  FYC SH + +       FL      G   F +I+FDI
Sbjct: 577 KKLDPRTISGYFIRYAEKSKGYRFYCPSHSIRIVESRNAKFLEYDLVSGSDQFRNIVFDI 636


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