BLASTX nr result
ID: Rehmannia26_contig00032896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00032896
(610 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518103.1| PREDICTED: ZF-HD homeobox protein At4g24660-... 61 3e-16
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 55 1e-15
emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera] 56 2e-15
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 54 6e-15
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 54 4e-14
gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana] 52 5e-14
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 54 6e-14
emb|CAN63182.1| hypothetical protein VITISV_029266 [Vitis vinifera] 52 7e-14
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 52 8e-14
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi... 52 8e-14
gb|EOY01844.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 56 2e-13
emb|CAN81503.1| hypothetical protein VITISV_018161 [Vitis vinifera] 55 2e-13
emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera] 53 7e-13
gb|EXB88426.1| Retrovirus-related Pol polyprotein from transposo... 51 1e-12
emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera] 52 1e-12
ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259... 51 2e-12
emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera] 51 2e-12
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 51 2e-12
emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera] 50 3e-12
emb|CAB10364.1| retrotransposon like protein [Arabidopsis thalia... 49 3e-12
>ref|XP_003518103.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
Length = 274
Score = 60.8 bits (146), Expect(2) = 3e-16
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +3
Query: 465 ATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKDLLAPSC 596
A +NW L+QLDVNNAFLN DL EEVYM+LP GY + L C
Sbjct: 46 AARNWCLLQLDVNNAFLNGDLLEEVYMELPKGYKSKNSSLYHEC 89
Score = 50.1 bits (118), Expect(2) = 3e-16
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLL 454
KA+L+AKGY QQ G+++ DTFS VAKL TV+VLL
Sbjct: 9 KAQLVAKGYTQQAGINFSDTFSLVAKLTTVRVLL 42
>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 54.7 bits (130), Expect(2) = 1e-15
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKD 578
AA + W L QLDVNNAFL+ DL EEVYM LPLG+S D
Sbjct: 713 AAAKQWYLHQLDVNNAFLHGDLNEEVYMQLPLGFSTPND 751
Score = 54.3 bits (129), Expect(2) = 1e-15
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGS 466
KARL+AKGY QQEG+ + DT+SPVAK+ TV+VLL + +
Sbjct: 677 KARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAA 714
>emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera]
Length = 659
Score = 56.2 bits (134), Expect(2) = 2e-15
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2
Query: 347 WNKARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPL 460
W+K L+AKGY QQEGV Y DTFS VAKL T+K+LL L
Sbjct: 356 WHKTHLVAKGYTQQEGVDYIDTFSLVAKLATIKLLLAL 393
Score = 52.4 bits (124), Expect(2) = 2e-15
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKDLL 584
A +W L+QLD+NNAFL+ DL EEVYM LP GY + D L
Sbjct: 394 ADIHSWFLVQLDINNAFLHGDLIEEVYMSLPQGYPHKGDTL 434
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 54.3 bits (129), Expect(2) = 6e-15
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGS 466
KARL+AKGY QQEG+ + DT+SPVAK+ TV+VLL + +
Sbjct: 983 KARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAA 1020
Score = 52.4 bits (124), Expect(2) = 6e-15
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKD 578
AAT+ W L QLDVNNAFL+ DL E+VYM LP G+S D
Sbjct: 1019 AATKQWYLHQLDVNNAFLHEDLNEDVYMQLPPGFSTPND 1057
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 54.3 bits (129), Expect(2) = 4e-14
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSNTK 475
KARL+AKGY Q+EG+ Y +TFSPVAKL +V+++L L + K
Sbjct: 978 KARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMK 1018
Score = 49.7 bits (117), Expect(2) = 4e-14
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYS 566
AA WS+ QLD++NAFLN DL EE+YM +P GY+
Sbjct: 1014 AAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYA 1048
>gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
Length = 1309
Score = 52.0 bits (123), Expect(2) = 5e-14
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSNTK 475
KARL+AKGY Q+E + Y +TFSPVAKL +V+++L L + K
Sbjct: 931 KARLVAKGYTQEESLDYEETFSPVAKLTSVRMMLLLAAKMK 971
Score = 51.6 bits (122), Expect(2) = 5e-14
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKDLLAPS 593
AA WS++QLD++NAFLN DL EE+YM +P GY+ DL+ S
Sbjct: 967 AAKMKWSVLQLDISNAFLNGDLDEEIYMKIPPGYA---DLIGES 1007
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 54.3 bits (129), Expect(2) = 6e-14
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSNTKL 478
KARL+A+GY Q+EG+ Y +TFSPVAKL +VK+LL + + KL
Sbjct: 862 KARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKL 903
Score = 48.9 bits (115), Expect(2) = 6e-14
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY-SGQKDLLAPS--CQL 602
AA SL QLD++NAFLN DL EE+YM LP GY S Q D L P+ C+L
Sbjct: 898 AARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRL 947
>emb|CAN63182.1| hypothetical protein VITISV_029266 [Vitis vinifera]
Length = 405
Score = 52.4 bits (124), Expect(2) = 7e-14
Identities = 22/39 (56%), Positives = 33/39 (84%)
Frame = +2
Query: 350 NKARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGS 466
+KARL+AKGY QQEG+ + DTFSPVAK+ ++++LL + +
Sbjct: 45 HKARLVAKGYTQQEGLDFFDTFSPVAKITSIRLLLAVAA 83
Score = 50.8 bits (120), Expect(2) = 7e-14
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQ 572
AA + W L QLDVNNAFL+ DL EEVYM+LP G + Q
Sbjct: 82 AAVKQWHLHQLDVNNAFLHGDLHEEVYMELPPGLAVQ 118
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 52.0 bits (123), Expect(2) = 8e-14
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSNT 472
KARL+A+G+ QQEG+ Y +TFSPVAK +VK+LL L + T
Sbjct: 1000 KARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAAT 1039
Score = 50.8 bits (120), Expect(2) = 8e-14
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKDLLAPS 593
AA WSL Q+DV+NAFL+ +L EE+YM LP GY+ + PS
Sbjct: 1036 AAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPS 1079
>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
gi|7267797|emb|CAB81200.1| putative retrotransposon
polyprotein [Arabidopsis thaliana]
Length = 1203
Score = 52.0 bits (123), Expect(2) = 8e-14
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSNT 472
KARL+A+G+ QQEG+ Y +TFSPVAK +VK+LL L + T
Sbjct: 586 KARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAAT 625
Score = 50.8 bits (120), Expect(2) = 8e-14
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKDLLAPS 593
AA WSL Q+DV+NAFL+ +L EE+YM LP GY+ + PS
Sbjct: 622 AAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPS 665
>gb|EOY01844.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8, putative
[Theobroma cacao]
Length = 374
Score = 56.2 bits (134), Expect(2) = 2e-13
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +3
Query: 450 FFPWAATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY 563
FF A NW L QLDVNNAFLN +L E+VYM+LP GY
Sbjct: 127 FFALAVVHNWHLSQLDVNNAFLNGELAEDVYMELPQGY 164
Score = 45.4 bits (106), Expect(2) = 2e-13
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 350 NKARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPL 460
+KARL+AKGYNQ +G Y+DTF+ VA+ TV+V L
Sbjct: 94 SKARLVAKGYNQIKGFDYQDTFNLVARQTTVRVFFAL 130
>emb|CAN81503.1| hypothetical protein VITISV_018161 [Vitis vinifera]
Length = 710
Score = 54.7 bits (130), Expect(2) = 2e-13
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
K RL+AKGY Q G+ Y+DTFSPVAKL TV+VL+ L +N
Sbjct: 347 KVRLVAKGYTQTYGIDYQDTFSPVAKLNTVRVLISLAAN 385
Score = 46.6 bits (109), Expect(2) = 2e-13
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYS 566
AA NW L Q DV NAFL+ L EEVYMD+P YS
Sbjct: 383 AANLNWPLHQFDVKNAFLHGGLEEEVYMDIPPSYS 417
>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
Length = 1409
Score = 53.1 bits (126), Expect(2) = 7e-13
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
KARL+AKGY Q GV Y++TFSP AKL TV+VL+ L +N
Sbjct: 960 KARLVAKGYTQTYGVDYQETFSPXAKLNTVRVLISLAAN 998
Score = 46.6 bits (109), Expect(2) = 7e-13
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY 563
AA +W L Q DV NAFL+ DL EEVYMD+P G+
Sbjct: 996 AANLDWPLHQFDVKNAFLHGDLEEEVYMDIPPGF 1029
>gb|EXB88426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1155
Score = 51.2 bits (121), Expect(2) = 1e-12
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +3
Query: 465 ATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYSGQKD 578
A +WSL QLDV NAFLN DL EEVYM++P G+ + D
Sbjct: 79 ANLDWSLQQLDVKNAFLNGDLEEEVYMEMPPGFEDKGD 116
Score = 47.8 bits (112), Expect(2) = 1e-12
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
KA L+AKGY Q G+ Y+ TF+PVAK+ TV+VLL + +N
Sbjct: 42 KACLVAKGYTQTYGIDYQGTFAPVAKINTVRVLLSITAN 80
>emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
Length = 1387
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
KARL+AKG+ Q V Y++TFSPVAKL TV+VLL L +N
Sbjct: 967 KARLVAKGFTQTYXVDYQETFSPVAKLNTVRVLLSLAAN 1005
Score = 47.0 bits (110), Expect(2) = 1e-12
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY 563
AA +W L Q DV NAFL+ DL E++YMD+P GY
Sbjct: 1003 AANLDWPLHQFDVKNAFLHGDLEEDIYMDIPSGY 1036
>ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]
Length = 1624
Score = 51.2 bits (121), Expect(2) = 2e-12
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
KARL+AKG+ Q V Y++TFSPVAKL TV+VLL L +N
Sbjct: 722 KARLVAKGFTQTYRVDYQETFSPVAKLNTVRVLLSLAAN 760
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY 563
AA +W L Q DV NAFL+ DL E++YMD+P GY
Sbjct: 758 AANLDWPLHQFDVKNAFLHGDLEEDIYMDIPSGY 791
>emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]
Length = 1246
Score = 51.2 bits (121), Expect(2) = 2e-12
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
KARL+AKG+ Q G+ Y +TF+PVAKL TV+VLL + +N
Sbjct: 837 KARLVAKGFTQTXGIDYLETFAPVAKLNTVRVLLSIAAN 875
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY 563
AA +W L QLDV NAFLN +L EEVYMD P G+
Sbjct: 873 AANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPGF 906
>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 50.8 bits (120), Expect(2) = 2e-12
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
KARL+AKG+ Q G+ Y +TF+PVAKL TV+VLL + +N
Sbjct: 1056 KARLVAKGFTQTYGIDYLETFAPVAKLNTVRVLLSIAAN 1094
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY 563
AA +W L QLDV NAFLN +L EEVYMD P G+
Sbjct: 1092 AANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPGF 1125
>emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]
Length = 621
Score = 49.7 bits (117), Expect(2) = 3e-12
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGSN 469
KARL+AKGY Q G+ Y++TF+ VAK+ TV+VLL L +N
Sbjct: 210 KARLVAKGYTQTYGIDYQETFALVAKMNTVRVLLSLAAN 248
Score = 47.8 bits (112), Expect(2) = 3e-12
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGY 563
AA NW L Q DV NAFL+ +L EE+YM++P GY
Sbjct: 246 AANYNWDLQQFDVKNAFLHGELEEEIYMEVPPGY 279
>emb|CAB10364.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268334|emb|CAB78628.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 237
Score = 49.3 bits (116), Expect(2) = 3e-12
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 462 AATQNWSLMQLDVNNAFLNADLFEEVYMDLPLGYS 566
AA WSL Q+DV NAFL++DL EE+YM LP GY+
Sbjct: 61 AARFGWSLTQMDVTNAFLHSDLDEEIYMSLPQGYT 95
Score = 48.1 bits (113), Expect(2) = 3e-12
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 353 KARLIAKGYNQQEGVHYRDTFSPVAKLVTVKVLLPLGS 466
KARL+ KG+ Q EGV Y DTFS VAKL +VK++L L +
Sbjct: 25 KARLVTKGFTQHEGVDYFDTFSLVAKLASVKLILGLAA 62