BLASTX nr result
ID: Rehmannia26_contig00032846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00032846
(673 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise... 341 1e-91
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 313 3e-83
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope... 308 1e-81
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 302 5e-80
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 302 7e-80
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 300 2e-79
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 300 2e-79
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 298 8e-79
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 298 8e-79
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 294 2e-77
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 294 2e-77
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 292 6e-77
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 292 6e-77
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 292 7e-77
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 292 7e-77
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 290 4e-76
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 288 8e-76
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 285 7e-75
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 285 9e-75
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 282 8e-74
>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
Length = 1379
Score = 341 bits (874), Expect = 1e-91
Identities = 167/225 (74%), Positives = 191/225 (84%), Gaps = 2/225 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FY+ LVKD+SS+F+ +YPS DD P E+FGLV + LFRGL+PYQEMVHSISSREVIVRS+
Sbjct: 712 FYTERLVKDLSSLFRSKYPSSDDCPTEDFGLVCQPLFRGLNPYQEMVHSISSREVIVRSS 771
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 361
RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEY NS +I +EFCAGDPVGV
Sbjct: 772 RGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYSANSTDIVTEFCAGDPVGV 831
Query: 362 LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKH 541
LAAT+MSNPAYKAVLD W+MMK+ILLC +FKND SDRRVILYL++C+CGRKH
Sbjct: 832 LAATSMSNPAYKAVLDSSSSSNSAWQMMKDILLCATSFKNDISDRRVILYLTDCECGRKH 891
Query: 542 CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMH--EEGNPGPV 670
CQE AL+V+NHLKKV+LKDTA++FLIEY Q+ EEG PG V
Sbjct: 892 CQETGALVVQNHLKKVTLKDTAVDFLIEYFHQLCQSLEEGYPGLV 936
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 313 bits (802), Expect = 3e-83
Identities = 159/220 (72%), Positives = 176/220 (80%), Gaps = 1/220 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FY+ LV DM+ +FQK+YPS P+EEFGLV LF GLDPYQ M+HSISSREVIVRST
Sbjct: 714 FYTKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRST 773
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVG 358
RGLTEPGTLFKNLMAILRDVVICYDGTVRN SNSIIQFEYG + +N+ SEFCAGDPVG
Sbjct: 774 RGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVG 833
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKAVLD WEMMKEILLCGV+FKND SDRRVILYL++C C R
Sbjct: 834 VLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRG 893
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGN 658
+C+E AA +VKNHL KV LKD A EFLIEY + E +
Sbjct: 894 YCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENS 933
>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1127
Score = 308 bits (789), Expect = 1e-81
Identities = 157/220 (71%), Positives = 173/220 (78%), Gaps = 1/220 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FY LV DM+ +FQK+YPS P+EEFGLV LF GLDPYQ M+HSISSREVIVRST
Sbjct: 265 FYXXTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRST 324
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVG 358
RGLTEPGTLF NLMAILRDVVICYDGTVRN SNSIIQFEYG + +N+ SEFCAGDPVG
Sbjct: 325 RGLTEPGTLFXNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVG 384
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKA LD WEMMKEILLCGV+FKND SDRRVILYL++C C R
Sbjct: 385 VLAATAMSNPAYKAXLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRG 444
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGN 658
+C+E AA +VKNHL KV LKD A EFLIEY + E +
Sbjct: 445 YCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENS 484
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 302 bits (774), Expect = 5e-80
Identities = 150/214 (70%), Positives = 175/214 (81%), Gaps = 1/214 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FYS LV+D++S+ +YPS DYP+ E+GLV F GLDPY+ +VHSI++REVIVRS+
Sbjct: 716 FYSKTLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSS 775
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVG 358
RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGVN + F AG+PVG
Sbjct: 776 RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVG 835
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKAVLD WE+MKEILLC VNFKN+ DRRVILYL+NC CGRK
Sbjct: 836 VLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRK 895
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQM 640
+C+E AA +VKN LKKVSLKDTA+EF+IEY +Q+
Sbjct: 896 YCRERAACLVKNQLKKVSLKDTAVEFMIEYNNQL 929
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 302 bits (773), Expect = 7e-80
Identities = 146/217 (67%), Positives = 173/217 (79%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FYS LV+D++S+F ++YP D YP+EEFG V R F GLDPY+E+VHSI++REVIVRS+
Sbjct: 514 FYSRGLVEDVASLFHQKYPFADVYPSEEFGFVSRCFFHGLDPYEEIVHSIATREVIVRSS 573
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 361
+GL EPGTLFKNLMA+LRDVVICYDGTVRN SNS+IQFEYGV + F AGDPVGV
Sbjct: 574 KGLAEPGTLFKNLMAVLRDVVICYDGTVRNISSNSVIQFEYGVGGMQSQNLFPAGDPVGV 633
Query: 362 LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKH 541
LAATAMSNPAYKAVLD W+MMKEIL C NF+ND +DRRVILYL++C CGRK+
Sbjct: 634 LAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRANFRNDINDRRVILYLNDCCCGRKY 693
Query: 542 CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEE 652
CQENA+ +VKNHLKKVSL+D AIE IEY+ + E
Sbjct: 694 CQENASCLVKNHLKKVSLRDAAIELAIEYKRPKLEPE 730
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 300 bits (769), Expect = 2e-79
Identities = 151/214 (70%), Positives = 173/214 (80%), Gaps = 2/214 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS LV+ M+ +F+ +YP DYP+ EFGL+ F GLDPY+EMVHSIS+RE+IVRS
Sbjct: 773 FYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRS 832
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPV 355
+RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV + F AG+PV
Sbjct: 833 SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPV 892
Query: 356 GVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGR 535
GVLAATAMSNPAYKAVLD WE+MKEILLC VNFKND DRRVILYL++CDCGR
Sbjct: 893 GVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGR 952
Query: 536 KHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQ 637
K+C+ENAA +VKN LKK SLKDTA+EF+IEY Q
Sbjct: 953 KYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQ 986
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 300 bits (769), Expect = 2e-79
Identities = 151/214 (70%), Positives = 173/214 (80%), Gaps = 2/214 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS LV+ M+ +F+ +YP DYP+ EFGL+ F GLDPY+EMVHSIS+RE+IVRS
Sbjct: 713 FYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRS 772
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPV 355
+RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV + F AG+PV
Sbjct: 773 SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPV 832
Query: 356 GVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGR 535
GVLAATAMSNPAYKAVLD WE+MKEILLC VNFKND DRRVILYL++CDCGR
Sbjct: 833 GVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGR 892
Query: 536 KHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQ 637
K+C+ENAA +VKN LKK SLKDTA+EF+IEY Q
Sbjct: 893 KYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQ 926
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 298 bits (764), Expect = 8e-79
Identities = 152/224 (67%), Positives = 174/224 (77%), Gaps = 1/224 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS LV+D++ FQ YPS DYP+ EFGL+ F GLDPY+ MVHSIS+REVIVRS
Sbjct: 714 FYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRS 773
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVG 358
+RGL+EPGTLFKNLMAILRDVVICYDGTVRN SNSIIQF+YG+N A +F AG+PVG
Sbjct: 774 SRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVG 832
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKAVLD WE+MKEILLC V+ KND DRRVILYL +CDCGRK
Sbjct: 833 VLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRK 892
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPV 670
+CQENAA +VKNHL+KV LKDTA+E + EY+ Q E G V
Sbjct: 893 YCQENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLV 936
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 298 bits (764), Expect = 8e-79
Identities = 152/224 (67%), Positives = 174/224 (77%), Gaps = 1/224 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS LV+D++ FQ YPS DYP+ EFGL+ F GLDPY+ MVHSIS+REVIVRS
Sbjct: 714 FYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRS 773
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVG 358
+RGL+EPGTLFKNLMAILRDVVICYDGTVRN SNSIIQF+YG+N A +F AG+PVG
Sbjct: 774 SRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVG 832
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKAVLD WE+MKEILLC V+ KND DRRVILYL +CDCGRK
Sbjct: 833 VLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRK 892
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPV 670
+CQENAA +VKNHL+KV LKDTA+E + EY+ Q E G V
Sbjct: 893 YCQENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLV 936
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 294 bits (752), Expect = 2e-77
Identities = 144/210 (68%), Positives = 170/210 (80%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FYS LV+D++S F++ YP +YP ++GL+ F GLDPY+EM HSIS+REVIVRS+
Sbjct: 714 FYSKTLVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSS 773
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 361
RGL+EPGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+ S F AG+PVGV
Sbjct: 774 RGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGV 833
Query: 362 LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKH 541
LAATAMSNPAYKAVLD WE+MKEILLC V+F ND DRRVILYL++C CGRK+
Sbjct: 834 LAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKY 893
Query: 542 CQENAALIVKNHLKKVSLKDTAIEFLIEYR 631
CQE AA +VKN LK+VSLKD A+EFLIEY+
Sbjct: 894 CQERAAYMVKNQLKRVSLKDAAVEFLIEYK 923
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 294 bits (752), Expect = 2e-77
Identities = 144/210 (68%), Positives = 170/210 (80%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FYS LV+D++S F++ YP +YP ++GL+ F GLDPY+EM HSIS+REVIVRS+
Sbjct: 715 FYSKTLVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSS 774
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 361
RGL+EPGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+ S F AG+PVGV
Sbjct: 775 RGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGV 834
Query: 362 LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKH 541
LAATAMSNPAYKAVLD WE+MKEILLC V+F ND DRRVILYL++C CGRK+
Sbjct: 835 LAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKY 894
Query: 542 CQENAALIVKNHLKKVSLKDTAIEFLIEYR 631
CQE AA +VKN LK+VSLKD A+EFLIEY+
Sbjct: 895 CQERAAYMVKNQLKRVSLKDAAVEFLIEYK 924
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 292 bits (748), Expect = 6e-77
Identities = 150/226 (66%), Positives = 175/226 (77%), Gaps = 3/226 (1%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS L++D++S+F RY S DYP+ EFGLV F GLDPY+EMVHSIS+REV+VRS
Sbjct: 713 FYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRS 772
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIA--SEFCAGDP 352
+RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYG+ + + S F G+P
Sbjct: 773 SRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEP 832
Query: 353 VGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCG 532
VGVLAATAMS PAYKAVLD W+MMKEILLC V+FKN+ DRRVILYL+NC CG
Sbjct: 833 VGVLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACG 892
Query: 533 RKHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPV 670
RK+C ENAA +VK+HLKKV+LKD A++F+IEY Q PG V
Sbjct: 893 RKYCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQPTPSGLGPGLV 938
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 292 bits (748), Expect = 6e-77
Identities = 150/226 (66%), Positives = 175/226 (77%), Gaps = 3/226 (1%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS L++D++S+F RY S DYP+ EFGLV F GLDPY+EMVHSIS+REV+VRS
Sbjct: 743 FYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRS 802
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIA--SEFCAGDP 352
+RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYG+ + + S F G+P
Sbjct: 803 SRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEP 862
Query: 353 VGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCG 532
VGVLAATAMS PAYKAVLD W+MMKEILLC V+FKN+ DRRVILYL+NC CG
Sbjct: 863 VGVLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACG 922
Query: 533 RKHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPV 670
RK+C ENAA +VK+HLKKV+LKD A++F+IEY Q PG V
Sbjct: 923 RKYCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQPTPSGLGPGLV 968
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 292 bits (747), Expect = 7e-77
Identities = 144/212 (67%), Positives = 172/212 (81%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FYS LV+D+S ++ ++YP DYP+ E GL+ F GLDPY+E+VHSIS+REVIVRS+
Sbjct: 717 FYSKTLVEDVSCLYTRKYPENVDYPSAEHGLIRSCFFHGLDPYEEIVHSISTREVIVRSS 776
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 361
RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG SA + + AG+PVGV
Sbjct: 777 RGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGRGSAR--NLYPAGEPVGV 834
Query: 362 LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKH 541
LAATAMSNPAYKAVLD WE+MKEILLC F+N+ DRRVILYL++C CGRK+
Sbjct: 835 LAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKAIFRNELIDRRVILYLNHCGCGRKY 894
Query: 542 CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQ 637
C+E A +V+N LKKVSLKDTA+EF+IEY++Q
Sbjct: 895 CREQATYLVQNQLKKVSLKDTAVEFMIEYKNQ 926
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 292 bits (747), Expect = 7e-77
Identities = 146/213 (68%), Positives = 174/213 (81%), Gaps = 2/213 (0%)
Frame = +2
Query: 5 YSAILVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
YS LV+D+SS++Q +YPS DYP+ EFGLV R GLDP + M+HSI++REVIVRS+
Sbjct: 713 YSKTLVEDVSSLYQNKYPSDIVDYPSAEFGLVHRGFVHGLDPVEGMIHSIATREVIVRSS 772
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVG 358
RGL+EPGTLFKNLMA LRDVVICYDGTVRN CSNSIIQFEYGV S + F AG+PVG
Sbjct: 773 RGLSEPGTLFKNLMATLRDVVICYDGTVRNVCSNSIIQFEYGVKSGSGPENLFPAGEPVG 832
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKAVLD W++MKEILLC VNFKN+ DRRV+LYL++C CGRK
Sbjct: 833 VLAATAMSNPAYKAVLDSTPSSNSSWDLMKEILLCKVNFKNELIDRRVVLYLNDCGCGRK 892
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQ 637
+C+E+AA +VKN LKKVSLKDTA+EF+IEY+ +
Sbjct: 893 YCREHAAYLVKNRLKKVSLKDTAVEFMIEYQKE 925
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 290 bits (741), Expect = 4e-76
Identities = 143/220 (65%), Positives = 176/220 (80%), Gaps = 2/220 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQ-KRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS LV+D++S FQ K + DDYP+ EFGL+ F GLDPY+E+VHSI++RE+I RS
Sbjct: 799 FYSKGLVEDVASHFQLKCFYDKDDYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIDRS 858
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPV 355
+RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ S + A F AG+PV
Sbjct: 859 SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDAAQHLFPAGEPV 918
Query: 356 GVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGR 535
GVLAAT+MSNPAYKAVLD W MKEILLC VNF+N+ +DRRVILYL++CDCGR
Sbjct: 919 GVLAATSMSNPAYKAVLDASPSSNSSWGFMKEILLCKVNFRNEPNDRRVILYLNDCDCGR 978
Query: 536 KHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEG 655
+C+ENAA +V+N L+KVSLKD A++F++EY+ Q +G
Sbjct: 979 NYCRENAAYLVQNQLRKVSLKDAALDFIVEYQQQRRRRDG 1018
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 288 bits (738), Expect = 8e-76
Identities = 143/221 (64%), Positives = 175/221 (79%), Gaps = 2/221 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQ-KRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRS 178
FYS LV+D+ S F K + D YP+ EFGL+ F GLDPY+E+VHSI++RE+IVRS
Sbjct: 717 FYSKGLVEDVGSHFHVKCFYDGDGYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIVRS 776
Query: 179 TRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPV 355
+RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ S + + F AG+PV
Sbjct: 777 SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDKSQPLFPAGEPV 836
Query: 356 GVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGR 535
GVLAAT+MSNPAYKAVLD WE MKEILLC VNF+N+ +DRRVILYL++CDCGR
Sbjct: 837 GVLAATSMSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPNDRRVILYLNDCDCGR 896
Query: 536 KHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGN 658
+C+ENAA +VKN L+KVSLKD A++F +EY+ Q +G+
Sbjct: 897 SYCRENAAYLVKNQLRKVSLKDAALDFTVEYQQQRRRNDGS 937
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 285 bits (730), Expect = 7e-75
Identities = 146/217 (67%), Positives = 171/217 (78%), Gaps = 2/217 (0%)
Frame = +2
Query: 5 YSAILVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
YS LV+D++S F +YP+ DYP+ ++GL+ + F GLD Y+EM HSIS+REVIVRS+
Sbjct: 720 YSKTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRSS 779
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVG 358
RGL+EPGTLFKNLMAILRDVVICYDGTVRN SNSIIQFEYGV S F AG+PVG
Sbjct: 780 RGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAGEPVG 839
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKAVLD W+MMKEILLC V FKND +DRRVILYL++C CGR
Sbjct: 840 VLAATAMSNPAYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRN 899
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHE 649
+CQE AA +VKNHL+KVSLKD A F+IEY+SQ + E
Sbjct: 900 YCQERAAYLVKNHLEKVSLKDIAKCFMIEYKSQQIPE 936
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 285 bits (729), Expect = 9e-75
Identities = 143/213 (67%), Positives = 167/213 (78%), Gaps = 1/213 (0%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRST 181
FY+ LV+DM+ F+ +YPS DYP+ + GL+ F GLDPY+EMVHSIS+REV+VRST
Sbjct: 716 FYTKTLVEDMALHFESKYPSDIDYPSAKHGLIQSCFFHGLDPYEEMVHSISAREVMVRST 775
Query: 182 RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSA-NIASEFCAGDPVG 358
RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ + S F AG+PVG
Sbjct: 776 RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGMKAGIKAQSLFPAGEPVG 835
Query: 359 VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRK 538
VLAATAMSNPAYKAVLD WE+MKEIL C VNFKND +DRRVILY + C CG+
Sbjct: 836 VLAATAMSNPAYKAVLDSTPSSNSSWELMKEILQCRVNFKNDITDRRVILYFNYCGCGKF 895
Query: 539 HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQ 637
+CQE A VKNHL+KV LKD A+ F+ EY+SQ
Sbjct: 896 YCQERLAYSVKNHLEKVILKDIALCFMCEYKSQ 928
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 282 bits (721), Expect = 8e-74
Identities = 143/223 (64%), Positives = 174/223 (78%), Gaps = 4/223 (1%)
Frame = +2
Query: 2 FYSAILVKDMSSMFQKRYPSC---DDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIV 172
FYS LV D++S F + C D YP+ E+GL+ F GLDPY+EMVHSIS+RE++V
Sbjct: 717 FYSKGLVDDVASHFHAK--CCYDGDGYPSAEYGLLKGCFFNGLDPYEEMVHSISTREIMV 774
Query: 173 RSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGD 349
RS+RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ + + + F AG+
Sbjct: 775 RSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSEHLFPAGE 834
Query: 350 PVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLSNCDC 529
PVGVLAATAMSNPAYKAVLD WE+MKEILLC VNF+N+ DRRVILYL++CDC
Sbjct: 835 PVGVLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVILYLNDCDC 894
Query: 530 GRKHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGN 658
G +C+ENAA VK+ L+KVSLKD A+EF+IEY+ Q +E +
Sbjct: 895 GGSYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENS 937