BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00032844
         (618 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    70   6e-10
ref|XP_006487091.1| PREDICTED: uncharacterized protein LOC102612...    64   3e-08
ref|XP_002456488.1| hypothetical protein SORBIDRAFT_03g037190 [S...    64   3e-08
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    63   8e-08
ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312...    62   1e-07
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    62   2e-07
ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein A...    61   2e-07
ref|XP_002526091.1| conserved hypothetical protein [Ricinus comm...    61   3e-07
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    60   4e-07
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    60   4e-07
ref|XP_004309843.1| PREDICTED: uncharacterized protein LOC101294...    60   5e-07
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A...    59   1e-06
ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617...    56   9e-06

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
 Frame = +1

Query: 127  SSNRWLPPPINQLCVDVSLIFESNSNTVGGA--VRNHEGKMVLAFHKSIDKPGSIVFGEL 300
            S  RW  P   QL V+            GG   +R+  G +++A  K+   P S +  EL
Sbjct: 1486 SLRRWQAPSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSLVAEL 1545

Query: 301  EAIHIGLQIVLQRNMVIQQISSDFLLAVQAVTNPKEDLSYVGAKANIIRDLLSKIQDSEL 480
             AI +GL +V++R +    + SD L A+  + + +  L+  G     I++ ++ +  S +
Sbjct: 1546 LAIKVGLDLVVERRLRNIMVESDCLEAIHLLNSKERCLAPEGGLVEDIQNTMALVNISSI 1605

Query: 481  FHVRWTANMVAHTLASLHFSFPTLHVW-ESGNIPLWMKNLVHHD 609
            +HVR   N  AH +A         +VW E G  P W+ +L+ HD
Sbjct: 1606 YHVRREGNTAAHAIAKFVARNNGRYVWLEDG--PDWLMSLICHD 1647


>ref|XP_006487091.1| PREDICTED: uncharacterized protein LOC102612209 [Citrus sinensis]
          Length = 243

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
 Frame = +1

Query: 49  RASSFLEDFQKVQSLKHEATKLVNVVSSNRWLPPPINQLCVDVSLIFESNSNT--VGGAV 222
           RAS+ +E +++++     A  + +  S   W PPP  +  V+V    + +     +G  +
Sbjct: 54  RASAIVESYRRIKIQNGPARSIHHRNSQQIWKPPPDGKYKVNVDAAIQMSGLKAGLGVVI 113

Query: 223 RNHEGKMVLAFHKSIDKPGSIVFGELEAIHIGLQIVLQRNMVIQQISSDFLLAVQAVTNP 402
            N  GK++ A  K +   G++   E EAI  G+Q+  Q   +   I SD    V+ V N 
Sbjct: 114 GNSNGKIIAAAVKRVSYKGTVACMEAEAILFGIQVAQQAECLPMIIESDSTEVVELVLNR 173

Query: 403 KEDLSYVGAKANIIRDLLSKIQDSELFHVRWTANMVAHTLASLHFSFPTLHVW 561
           K  ++ +      I+  L     S +       N +AH++  + F F    +W
Sbjct: 174 KGSMTEISWTVEEIKQRLMNHNTSSIQFAPRKCNAIAHSIVKVAFDFENPVIW 226


>ref|XP_002456488.1| hypothetical protein SORBIDRAFT_03g037190 [Sorghum bicolor]
           gi|241928463|gb|EES01608.1| hypothetical protein
           SORBIDRAFT_03g037190 [Sorghum bicolor]
          Length = 589

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
 Frame = +1

Query: 130 SNRWLPPPINQLCV--DVSLIFESNSNTVGGAVRNHEGKMVLAFHKSIDKPGSIVFGELE 303
           S RW PP    L +  D + + +  +   G  VR+  G    A  + +   GS++  E E
Sbjct: 425 STRWSPPAPGMLKINSDGAFLQDRGTGAAGAVVRDSSGNFCAASARWLGPVGSVLIAEAE 484

Query: 304 AIHIGLQIVLQRNMVIQQISSDFLLAVQAVTNPKEDLSYVGAKANIIRDLLSKIQDSELF 483
           AI  GL+++ Q  M      +D    V    N     S + A    I +++S     EL 
Sbjct: 485 AIRDGLRLIPQGTMEHIIGETDAREVVALWKNRTRQRSEIAAILKEIEEIVSAFTSFELI 544

Query: 484 HVRWTANMVAHTLASLHFSFPTLHVWES 567
           HVR  AN VAHT A    S    HVW S
Sbjct: 545 HVRREANSVAHTCARFASSSLDSHVWFS 572


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
 Frame = +1

Query: 49   RASSFLEDFQKVQSLKHEATKLVNV--VSSNRWLPPPINQLCVDVSLIFESNSNT--VGG 216
            +A S LE + + +  K +A+ + NV  +   +W PPP N L V+V     +      +G 
Sbjct: 1146 KAESLLEAYHRAR--KPDASHIHNVKRIVQKKWEPPPGNFLKVNVDAAINNRDQVAGLGA 1203

Query: 217  AVRNHEGKMVLAFHKSIDKPGSIVFGELEAIHIGLQIVLQRNMVIQQISSDFLLAVQAVT 396
             +++  GK+V A  K +     + F E EA+  GLQI  + ++    + +D    V  + 
Sbjct: 1204 VIKDPSGKIVAAGTKQVPLREGVSFAEAEAMEWGLQIARELSLSALIMETDCKEVVDLLN 1263

Query: 397  NPKEDLSYVGAKANIIRDLLSKIQDSELFHVRWTANMVAHTLASLHFSFPTLHVW 561
            N K   + +    + I++     ++ +  H+  T N  AH+LA L     T  VW
Sbjct: 1264 NTKGSRTGISWVISDIQEQRRDFKEVKFRHIPRTCNTCAHSLAKLAVGANTSAVW 1318


>ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312896 [Fragaria vesca
            subsp. vesca]
          Length = 2277

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
 Frame = +1

Query: 118  NVVSSNRWLPPPINQLCVDVSLIFESNS--NTVGGAVRNHEGKMVLAFHKSIDKPGSIVF 291
            NV   +RW+ P    + ++V   + + S   ++GG  R+H G  +  F + +    S   
Sbjct: 1259 NVSPRDRWITPSSGYIKLNVDAAYNNASCMASLGGVFRDHTGSCLGVFMQGLFSAHSAHH 1318

Query: 292  GELEAIHIGLQIVLQRNMVIQQISSDFLLAVQAVTNPKEDLSYVGAKANIIRDLLSKIQD 471
             EL A+ +G+Q+ +  N+    I +D L+ V A+T+   D S +G     +R  LS I  
Sbjct: 1319 SELMALLVGVQVAIHHNLYPLSIETDCLVLVSALTSGSLDDSDLGFLIEDLRASLSTITA 1378

Query: 472  SELFHVRWTANMVAHTLASLHFSFP 546
               F +R +AN VAH +A   FS P
Sbjct: 1379 PVRF-MRRSANRVAHVIAKEAFSGP 1402


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/181 (23%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
 Frame = +1

Query: 52   ASSFLEDFQKVQSLKHEATKLVNVVSSNRWLPPPIN--QLCVDVSLIFESNSNTVGGAVR 225
            A + ++ ++++Q  + +A    ++VS   W  PP    ++ VD ++  E+    +G  +R
Sbjct: 581  AEAIVQSYKRIQMPQLQAFSNQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIR 640

Query: 226  NHEGKMVLAFHKSIDKPGSIVFGELEAIHIGLQIVLQRN---MVIQQISSDFLLAVQAVT 396
            N EGK + A  K       + + E EA   GL++        ++++  S +    V A  
Sbjct: 641  NSEGKFITAAIKPSKWLDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVSARK 700

Query: 397  NPKEDLSYVGAKANIIRDLLSKIQDSELFHVRWTANMVAHTLASLHFSFPTLHVWESGNI 576
            + K ++ ++ ++   ++D + +++  ++ H   T N  AHTLA L   +    +WE  N+
Sbjct: 701  STKAEIFWIVSE---VQDTMKRLKHVKIQHSPRTCNGFAHTLAKLVLDYTDCVIWED-NL 756

Query: 577  P 579
            P
Sbjct: 757  P 757


>ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 369

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
 Frame = +1

Query: 94  KHEATKLVNVVSSNRWLPPPINQLCVDVSLIFESN--SNTVGGAVRNHEGKMVLAFHKSI 267
           +H  +K    +S  +W  PP  +L V++   FE    S  VG  VRN+EG+ V  F +  
Sbjct: 206 QHSGSKKKRAIS--KWSCPPRGRLKVNIDGSFEQELGSGGVGVVVRNYEGECVATFARPF 263

Query: 268 DKPGSIVFGELEAIHIGLQIVLQRNMVIQQISSDFLLAVQAVTNPKEDLSYVGAKANIIR 447
               S    E EA+  G+ I +Q+     ++ SD +  V A+ N  +DLS  G      +
Sbjct: 264 QYALSAFHMEAEALRAGMLICIQQGWEDVEVESDCVNLVHALHNTDDDLSIAGRVIEDCQ 323

Query: 448 DLLSKIQDSELFHVRWTANMVAHTLA 525
             +S      L H+   AN VA+ LA
Sbjct: 324 RYVSAFNFFHLQHIYREANSVANRLA 349


>ref|XP_002526091.1| conserved hypothetical protein [Ricinus communis]
           gi|223534588|gb|EEF36285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 328

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 43/159 (27%), Positives = 72/159 (45%)
 Frame = +1

Query: 139 WLPPPINQLCVDVSLIFESNSNTVGGAVRNHEGKMVLAFHKSIDKPGSIVFGELEAIHIG 318
           WL P    L ++V  +F S +  +   +R+  G  ++A    I    ++V GELEAI  G
Sbjct: 169 WLAPVSGHLKMNVDDVFNSFACGLEFVLRDSSGACMVAGAFPISSTRTVVLGELEAIRQG 228

Query: 319 LQIVLQRNMVIQQISSDFLLAVQAVTNPKEDLSYVGAKANIIRDLLSKIQDSELFHVRWT 498
           L + L+  +    + +D L A+ ++      +   G     I+ L      S L  +   
Sbjct: 229 LILALECGLYGFSVETDCLGAIASINGIASLMDESGVLVQDIQHLSYMAHVSSLRFLPRN 288

Query: 499 ANMVAHTLASLHFSFPTLHVWESGNIPLWMKNLVHHDSV 615
           +NMVAH +A          VW    +PLW+ +L+  DS+
Sbjct: 289 SNMVAHFIACFALHAGVELVWLEDEVPLWLHDLLIRDSM 327


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
 Frame = +1

Query: 52   ASSFLEDFQKVQSLKHEATKLVNVVSSNRWLPPPIN--QLCVDVSLIFESNSNTVGGAVR 225
            A + ++ ++++Q  + +A    ++VS   W  PP    ++ VD ++  E+    +G  +R
Sbjct: 581  AEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIR 640

Query: 226  NHEGKMVLAFHKSIDKPGSIVFGELEAIHIGLQIVLQRN---MVIQQISSDFLLAVQAVT 396
            N EGK + A  K       + + E EA   GL++        ++++  S +    V A  
Sbjct: 641  NSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVSARK 700

Query: 397  NPKEDLSYVGAKANIIRDLLSKIQDSELFHVRWTANMVAHTLASLHFSFPTLHVWESGNI 576
            + K ++ ++ ++   ++D + +++  +L H     N  AHTLA L   +    +WE  N+
Sbjct: 701  STKAEIFWIVSE---VQDTMKRLKHVKLQHSPRACNGFAHTLAKLALDYTDCVIWED-NL 756

Query: 577  P 579
            P
Sbjct: 757  P 757


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
 Frame = +1

Query: 52   ASSFLEDFQKVQSLKHEATKLVNVVSSNRWLPPPIN--QLCVDVSLIFESNSNTVGGAVR 225
            A + ++ ++++Q  + +A    ++VS   W  PP    ++ VD ++  E+    +G  +R
Sbjct: 784  AEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIR 843

Query: 226  NHEGKMVLAFHKSIDKPGSIVFGELEAIHIGLQIVLQRN---MVIQQISSDFLLAVQAVT 396
            N EGK + A  K       + + E EA   GL++        ++++  S +    V A  
Sbjct: 844  NSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVSARK 903

Query: 397  NPKEDLSYVGAKANIIRDLLSKIQDSELFHVRWTANMVAHTLASLHFSFPTLHVWESGNI 576
            + K ++ ++ ++   ++D + +++  +L H     N  AHTLA L   +    +WE  N+
Sbjct: 904  STKAEIFWIVSE---VQDTMKRLKHVKLQHSPRACNGFAHTLAKLALDYTDCVIWED-NL 959

Query: 577  P 579
            P
Sbjct: 960  P 960


>ref|XP_004309843.1| PREDICTED: uncharacterized protein LOC101294625 [Fragaria vesca
           subsp. vesca]
          Length = 180

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
 Frame = +1

Query: 136 RWLPPPINQLCVDV--SLIFESNSNTVGGAVRNHEGKMVLAFHKSIDKPGSIVFGELEAI 309
           RW  PP  +L +++  S +  +    VG  VR+  G  +    + ++   S++  E+EA 
Sbjct: 2   RWECPPSGRLKINIDGSFLASNGCGGVGVIVRDETGLGIATLSRPVEHAHSVLNMEVEAC 61

Query: 310 HIGLQIVLQRNMVIQQISSDFLLAVQAVTNPKEDLSYVGAKANIIRDLLSKIQDSELFHV 489
            +GL +   +      I SDF+L V A+   +EDLS VG      +D +   Q   + HV
Sbjct: 62  RVGLLLGTHQCWTNIDIKSDFILLVAALGREEEDLSEVGRVLCDCKDYMKAFQSITIQHV 121

Query: 490 RWTANMVAHTLASL 531
              AN VA+ LA L
Sbjct: 122 SREANGVANRLAHL 135


>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 888

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
 Frame = +1

Query: 100  EATKLV----NVVSSNRWLPPPIN--QLCVDVSLIFESNSNTVGGAVRNHEGKMVLAFHK 261
            EATK +    N  +  RW PP +   +L VD + +  +    +GG +RN  G  + AF  
Sbjct: 710  EATKPLVPKKNQQTRPRWSPPAVGVLKLNVDGAFLHNNTDGGIGGILRNSHGHAIAAFAY 769

Query: 262  SIDKPGSIVFGELEAIHIGLQIVLQRNMVIQQISSDFLLAVQAVTNPKEDLSYVGAKANI 441
             +    S    ELEAI  GLQ + +      +I +D  L VQ +      L   G   NI
Sbjct: 770  HLTNVTSPKQVELEAIRTGLQWMHKLGYHDYEIQTDCQLVVQDIVATDFLLMEYG---NI 826

Query: 442  IRDL---LSKIQDSELFHVRWTANMVAHTLASLHFSFPTLHVWESGNIPLWMKNLVHHD 609
            + D+   L+++++ ++     T N VAH LAS  F       W   ++P+ ++ ++ +D
Sbjct: 827  LADIHVALNRMRNVKITFAARTTNCVAHRLASFAFEQSNQLEW-LDSMPIMLREVLRYD 884


>ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617744 [Citrus sinensis]
          Length = 294

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 5/176 (2%)
 Frame = +1

Query: 49  RASSFLEDFQKVQSLKHEATKLVNVVSSNRWLPPPINQLCVDVSLIFESNSNTVG-GAV- 222
           +A S LE +Q+V+             S  RW PPP N L ++V     S    VG GAV 
Sbjct: 106 KAESMLEAYQRVRKTGTLHISNTREESQQRWSPPPTNVLKLNVDAATNSKDQKVGLGAVL 165

Query: 223 RNHEGKMVLAFHKSIDKPGSIVFGELEAIHIGLQIVLQRNMVIQQISSDFLLAVQAVTNP 402
           R+  G++V A  K       + F E EAI  GLQI  +       + +D     + V N 
Sbjct: 166 RDSNGRVVAAGIKQASFRKDVSFAEAEAIQWGLQIAKKAAAASLIVETDCKDVAELVNNT 225

Query: 403 KEDLSYVGAKANIIRDLLSKIQDSELFHVRWT---ANMVAHTLASLHFSFPTLHVW 561
           K   S +     II ++ ++ ++ +  H  +     N  AH+LA       T  VW
Sbjct: 226 KGSRSEI---FWIISEIQTQKREFQRIHFNFVPRFCNAHAHSLAKHALRKDTTAVW 278