BLASTX nr result

ID: Rehmannia26_contig00032793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00032793
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528689.1| pentatricopeptide repeat-containing protein,...    61   2e-07
gb|EXC23833.1| hypothetical protein L484_006096 [Morus notabilis]      59   5e-07
ref|XP_004246986.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_006429582.1| hypothetical protein CICLE_v10013314mg, part...    57   3e-06

>ref|XP_002528689.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531861|gb|EEF33678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 271

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/81 (35%), Positives = 53/81 (65%)
 Frame = +3

Query: 180 KEKQSIYGHTSNRKLQVQDFLETVVTVPSSEKLEAFEKFQRNGEMQTISEFNHLLMSLVA 359
           ++++S+       +LQV+  L+ +  +P   + E  + F ++GE+ +IS+FN LLM+LV 
Sbjct: 40  QKQESVKFDAKASRLQVEKLLDAIRALPFKGRTEILDVFGKDGEIPSISDFNDLLMALVI 99

Query: 360 ADEFELALKLKSNLSSFGLFP 422
           A+E +LAL + S++S+ GL P
Sbjct: 100 ANELDLALNMYSDVSTLGLVP 120


>gb|EXC23833.1| hypothetical protein L484_006096 [Morus notabilis]
          Length = 618

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
 Frame = +3

Query: 135 NSINRRKFHLFATPIKE---KQSIYGHTSNRKLQVQDFLETVVTVPSSEKLEAFEKFQRN 305
           N I + K + +  PI E   K   Y  T++  +QV++ +E V  +PS E+ +  + +++N
Sbjct: 160 NDIVQPKDNNYRLPINEDCPKYLDYDKTASI-IQVKNLVERVQVLPSKERSKTIKIWKQN 218

Query: 306 GEMQTISEFNHLLMSLVAADEFELALKLKSNLSSFGL 416
           GE +T+SEFN LLM+L+  D+  LALKL   +S  G+
Sbjct: 219 GEFETVSEFNDLLMALLFVDDSNLALKLFDEMSFHGV 255


>ref|XP_004246986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Solanum lycopersicum]
          Length = 461

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +3

Query: 300 RNGEMQTISEFNHLLMSLVAADEFELALKLKSNLSSFGLFP 422
           +NG  QTIS+FNH L SLV ADEFELALKL S+ SS+GL P
Sbjct: 51  KNGGFQTISDFNHQLTSLVLADEFELALKLTSSSSSYGLTP 91


>ref|XP_006429582.1| hypothetical protein CICLE_v10013314mg, partial [Citrus clementina]
           gi|557531639|gb|ESR42822.1| hypothetical protein
           CICLE_v10013314mg, partial [Citrus clementina]
          Length = 438

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/69 (39%), Positives = 44/69 (63%)
 Frame = +3

Query: 216 RKLQVQDFLETVVTVPSSEKLEAFEKFQRNGEMQTISEFNHLLMSLVAADEFELALKLKS 395
           R LQ Q F++ +   P  E+++ F+  +++G   ++S+FN LLM+LV  +E E A+K  S
Sbjct: 9   RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 68

Query: 396 NLSSFGLFP 422
             SS+GL P
Sbjct: 69  EASSYGLAP 77


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