BLASTX nr result
ID: Rehmannia26_contig00032754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00032754
(286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 67 3e-09
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 65 1e-08
gb|AAD14492.1| Hypothetical protein [Arabidopsis thaliana] 63 3e-08
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 63 5e-08
ref|XP_006303650.1| hypothetical protein CARUB_v10011649mg [Caps... 62 6e-08
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 62 6e-08
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 62 8e-08
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 61 2e-07
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 60 3e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 9e-07
gb|AAC62784.1| F11O4.8 [Arabidopsis thaliana] gi|7268196|emb|CAB... 58 1e-06
ref|XP_006279399.1| hypothetical protein CARUB_v10007977mg [Caps... 58 1e-06
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 58 1e-06
ref|XP_006296178.1| hypothetical protein CARUB_v10025338mg [Caps... 57 2e-06
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ... 57 2e-06
gb|EMS61574.1| Calcium/calmodulin-dependent serine/threonine-pro... 57 3e-06
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 57 3e-06
ref|NP_172471.1| ribonuclease H-like protein [Arabidopsis thalia... 57 3e-06
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 57 3e-06
gb|AAC34342.1| Hypothetical protein [Arabidopsis thaliana] 57 3e-06
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +2
Query: 8 FLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPVWWSK 187
FLW+ L G VPV + +RGI D C CGA+EE++ H LF C A ++W+LS + +
Sbjct: 840 FLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAP 899
Query: 188 GISPNCSI 211
GI P+ SI
Sbjct: 900 GIFPSNSI 907
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPVWW 181
K FLWK + G +PV +SRR I+A++ CK CG E +L HL+ C A KVW L+PV +
Sbjct: 984 KHFLWKAMKGALPVGEALSRRNIEAEVTCKRCGQTESSL-HLMLLCPYAKKVWELAPVLF 1042
Query: 182 SKGISPNCSI 211
+ + + S+
Sbjct: 1043 NPSEATHSSV 1052
>gb|AAD14492.1| Hypothetical protein [Arabidopsis thaliana]
Length = 240
Score = 63.2 bits (152), Expect = 3e-08
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +2
Query: 8 FLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
FLW+ L G VP+ + +RGI +I C CGA EET+ H LF C A ++W+LS +
Sbjct: 30 FLWQILAGCVPITDNLRKRGINCEIGCSRCGALEETINHTLFLCHPARQIWALSQI 85
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLS 169
++FLWK LHG +PV+ ++ RGI++D C C ET+ H+LF C A +VW+++
Sbjct: 1055 RIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAIT 1110
>ref|XP_006303650.1| hypothetical protein CARUB_v10011649mg [Capsella rubella]
gi|482572361|gb|EOA36548.1| hypothetical protein
CARUB_v10011649mg [Capsella rubella]
Length = 261
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +2
Query: 5 MFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSP 172
MFLWKCLHG +P Q+ R I A++ C CG E L HLLF C ++ +W+L P
Sbjct: 1 MFLWKCLHGAIPTGQQLVSRHIPANLACDLCGEPESIL-HLLFHCRFSIDIWALMP 55
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
KMFLW+ L +PV QI RRG+ D C+ CG E+ H+LFTC A +VW+LS V
Sbjct: 832 KMFLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV 889
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPVWW 181
K+FLW+ L +PV QI RRG+ D C+ CG E++ H+LFTC A +VW+LS V
Sbjct: 1058 KLFLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPT 1117
Query: 182 SKGISPNCSI 211
S+ N SI
Sbjct: 1118 SQFGFQNSSI 1127
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
K+FLWK L G +PV +S RG+K D C+ CG E+++H+LF+C +VW++S +
Sbjct: 904 KVFLWKVLSGAIPVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPRQVWAMSNI 961
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPVWW 181
K F W+CL G + ++ R I + +C CGA EE++ HLLF C + ++W+LSP+
Sbjct: 936 KHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPS 995
Query: 182 SKGISPNCSI 211
S+ I P S+
Sbjct: 996 SEYIFPRNSL 1005
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPVWW 181
K+F WK +H + V + + +RG+ D C CG EET EHL++ C+ + + W +SP+
Sbjct: 1064 KLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRI 1123
Query: 182 SKGISPNCSIRQW 220
G S R W
Sbjct: 1124 HTGNIEAGSFRIW 1136
>gb|AAC62784.1| F11O4.8 [Arabidopsis thaliana] gi|7268196|emb|CAB77723.1| putative
reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 239
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
K FLW+ G + V S++S RGI+ DI CK C A+ET+ ++LF C + K+ LS +
Sbjct: 69 KHFLWQIASGFLAVTSKLSHRGIQCDITCKMCEMADETINNVLFECSHSRKICELSKI 126
>ref|XP_006279399.1| hypothetical protein CARUB_v10007977mg [Capsella rubella]
gi|482548097|gb|EOA12297.1| hypothetical protein
CARUB_v10007977mg [Capsella rubella]
Length = 417
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLS 169
KMF W+ L G + V + R GI + +C+ C EET+ H+LF C+ A +VWS+S
Sbjct: 101 KMFFWRVLSGAIAVSECLRRHGINTNPLCQVCKVEEETISHVLFGCQLAQQVWSVS 156
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
K+FLWK L G V V+ ++ RG+ + C C ETL H+LF C A +VW+L+P+
Sbjct: 785 KVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPM 842
>ref|XP_006296178.1| hypothetical protein CARUB_v10025338mg [Capsella rubella]
gi|482564886|gb|EOA29076.1| hypothetical protein
CARUB_v10025338mg [Capsella rubella]
Length = 417
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLS 169
K+F W+ L G V V + R GI ++ +C+ C EET+ H+LF C+ A +VWS+S
Sbjct: 101 KLFFWRVLSGAVAVSECLHRHGINSNPLCQACKVEEETISHVLFGCQLAQQVWSVS 156
>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1555
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
K+F+WK L G VPV ++ R I D CK CG + E++ HLLF C+ A +VW L+P+
Sbjct: 1261 KLFVWKVLKGAVPVGERLLERHIDIDPRCKRCG-SNESITHLLFHCQFAQRVWHLAPL 1317
>gb|EMS61574.1| Calcium/calmodulin-dependent serine/threonine-protein kinase 1
[Triticum urartu]
Length = 903
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 5 MFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVW 160
+F W+ LHGIVP ++ +K+ +IC C E L H+LFTC+R+ KVW
Sbjct: 718 VFNWRVLHGIVPCYCTLTDHHMKSPVICPVCRTTPEDLRHMLFTCDRSKKVW 769
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
K+F+WK ++P + +RGI + CK CG E + H+L TC+ A KVW SPV
Sbjct: 30 KIFVWKATKNLLPTAENLCKRGIVQEAHCKRCGNKVENILHVLVTCKAAKKVWQRSPV 87
>ref|NP_172471.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|332190406|gb|AEE28527.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 303
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
K+FLWK G +PV +Q+ RR I + C CG A ET H+LF C+ A +VW+L+P+
Sbjct: 5 KLFLWKAAAGALPVGAQLVRRHISSTWDCARCG-APETSTHMLFHCDFAAQVWNLAPL 61
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVW 160
K F+W+CL G + +Q+ R I AD C+ C A+ET+ H++FTC A VW
Sbjct: 1398 KHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVW 1450
>gb|AAC34342.1| Hypothetical protein [Arabidopsis thaliana]
Length = 374
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2
Query: 2 KMFLWKCLHGIVPVQSQISRRGIKADIICKWCGAAEETLEHLLFTCERAVKVWSLSPV 175
K+FLWK G +PV +Q+ RR I + C CG A ET H+LF C+ A +VW+L+P+
Sbjct: 5 KLFLWKAAAGALPVGAQLVRRHISSTWDCARCG-APETSTHMLFHCDFAAQVWNLAPL 61