BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00032406
         (380 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   120   1e-25
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   118   9e-25
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   117   2e-24
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   115   6e-24
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   115   8e-24
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   114   2e-23
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   114   2e-23
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   113   2e-23
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   113   2e-23
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   112   5e-23
emb|CAN67587.1| hypothetical protein VITISV_036279 [Vitis vinifera]   111   1e-22
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   110   2e-22
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   110   3e-22
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   110   3e-22
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   110   3e-22
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   109   3e-22
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   109   4e-22
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   108   6e-22
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   108   6e-22
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   108   6e-22

>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  120 bits (302), Expect = 1e-25
 Identities = 64/126 (50%), Positives = 83/126 (65%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGH S   L  LPF SDV  T     S  CE+C ++KQ+R  FPLS +  +  F+LVH D
Sbjct: 511 LGHPSSKALHLLPF-SDV--TSSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCD 567

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           LWGPY  TS+  + Y LT+VDD+SRA W++LL  K E P+ L+ FI LV+ Q+   IK++
Sbjct: 568 LWGPYRTTSICGSRYFLTLVDDYSRAVWLYLLPSKQEAPKHLKNFIALVERQYTTNIKMI 627

Query: 19  RSDNGS 2
           RSDNGS
Sbjct: 628 RSDNGS 633


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  118 bits (295), Expect = 9e-25
 Identities = 58/126 (46%), Positives = 84/126 (66%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGHAS  I++ LP   ++  + K+ L   C+ C ++KQ+R +FPLSD+ + ++F L+H D
Sbjct: 520 LGHASDKIVNLLP--RELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCD 577

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WGPY   S     Y LTIVDD+SR  W++L+  KSE  + L+ FI LV+ QF   IK+V
Sbjct: 578 VWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKIV 637

Query: 19  RSDNGS 2
           RSDNG+
Sbjct: 638 RSDNGT 643


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/126 (46%), Positives = 83/126 (65%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGHAS  I++ LP   ++  + K+ L   C+ C ++KQ+R +FPLSD+ + ++F L+H D
Sbjct: 296 LGHASDKIVNLLP--RELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCD 353

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WGPY   S     Y LTIVDD+SR  W++L+  KSE  + L+ FI LV+ QF   IK V
Sbjct: 354 VWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKTV 413

Query: 19  RSDNGS 2
           RSDNG+
Sbjct: 414 RSDNGT 419


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  115 bits (288), Expect = 6e-24
 Identities = 58/125 (46%), Positives = 76/125 (60%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGH S  +    PFL +     K      C +C  +K +R  FPLS S + + FDL+H+D
Sbjct: 537 LGHPSSKVSVLFPFLQN-----KTLDVSTCSICPLAKHTRTPFPLSVSSSDSCFDLIHVD 591

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WG Y V SL    Y LTIVDDHSR+TW++L+ HKSE   +L  F+ LV  QF   +K+V
Sbjct: 592 IWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIV 651

Query: 19  RSDNG 5
           RSDNG
Sbjct: 652 RSDNG 656


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  115 bits (287), Expect = 8e-24
 Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTD--KQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVH 206
           LGH S    S L  LS+V  T   K + S  C VCH +KQ +LSFP +++   + F+L+H
Sbjct: 573 LGHPS---FSRLDSLSEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLH 629

Query: 205 IDLWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIK 26
           ID+WGP++V ++    Y LTIVDDHSRATWI+LL+ KS+V  V   FI LV+ Q+   +K
Sbjct: 630 IDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVK 689

Query: 25  VVRSDN 8
            VRSDN
Sbjct: 690 SVRSDN 695


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/126 (44%), Positives = 82/126 (65%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGHAS  I++ LP   ++  + K+ L   C+ C ++KQ+R +FPL D+ + ++F L+H D
Sbjct: 296 LGHASDKIVNLLP--RELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLIHCD 353

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WGPY   S     Y LTIVDD+SR  W++L+  KSE  + L+ F+ LV+ QF   IK V
Sbjct: 354 VWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDTEIKTV 413

Query: 19  RSDNGS 2
           RSDNG+
Sbjct: 414 RSDNGT 419


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  114 bits (284), Expect = 2e-23
 Identities = 59/126 (46%), Positives = 77/126 (61%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGH S ++LS LP  S   KT     S  C+VC ++KQ+R  FP S +     F L+H D
Sbjct: 534 LGHPSFSVLSSLPLFS---KTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLIHCD 590

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WGPY V +     Y LTIVDD+SRA W +LL  KSEV +VL  F+   + QF   +K+V
Sbjct: 591 VWGPYRVPASCGAVYFLTIVDDYSRAVWTYLLLEKSEVRQVLTNFLKYAEKQFGKTVKMV 650

Query: 19  RSDNGS 2
           RSDNG+
Sbjct: 651 RSDNGT 656


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  113 bits (283), Expect = 2e-23
 Identities = 59/126 (46%), Positives = 82/126 (65%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGH S  +L  L F SD   T     S  CE+C K+KQ+R  FPLS++  ++ F++VH D
Sbjct: 475 LGHPSSKVLKLLSF-SD--STGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCD 531

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           LWGPY  TS+  + Y LT+VD+++RA W++LL  K   P  L+ FI LV+ QF+  IK +
Sbjct: 532 LWGPYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPMHLKNFISLVERQFSTKIKTI 591

Query: 19  RSDNGS 2
           RSDNG+
Sbjct: 592 RSDNGT 597


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  113 bits (283), Expect = 2e-23
 Identities = 63/126 (50%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTD--KQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVH 206
           LGHAS   L  L  +SD   T   K + S  C VCH +KQ +LSFP S+      FDL+H
Sbjct: 562 LGHAS---LQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLH 618

Query: 205 IDLWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIK 26
           ID+WGP++V ++    Y LTIVDDHSRATW++LL+ KSEV  V   FI  V+ Q+   +K
Sbjct: 619 IDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVK 678

Query: 25  VVRSDN 8
            VRSDN
Sbjct: 679 AVRSDN 684


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/124 (43%), Positives = 80/124 (64%)
 Frame = -2

Query: 379  LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
            +GH S + +  L  + ++  +D       C +C  +KQ RLSFP+ ++ A N FDL+H D
Sbjct: 1801 MGHPSISRIKELAKMIEI--SDFPNCKEVCHICPLAKQRRLSFPILNNIAENIFDLIHCD 1858

Query: 199  LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
            +WGP+   +     Y  TIVDD SR TW++LL+HKS++ +V+ RF  L++TQF+ VIKV 
Sbjct: 1859 IWGPFKTPTHAGHSYFATIVDDKSRYTWVYLLKHKSDILQVIPRFFKLIETQFSKVIKVF 1918

Query: 19   RSDN 8
            RSDN
Sbjct: 1919 RSDN 1922



 Score =  106 bits (264), Expect = 4e-21
 Identities = 52/124 (41%), Positives = 79/124 (63%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           +GH S + +  L  + ++  +D         +C  +KQ RLSFP+ ++ A N F+L+H D
Sbjct: 376 MGHPSISRIKELAKMIEI--SDFPNCKEVYHICPLAKQRRLSFPILNNIAENVFELIHCD 433

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WGP+   +     Y  TIVDD SR TW++LL+HKS++ +V+ RF  L++TQF+ VIKV 
Sbjct: 434 IWGPFKTPTHAGHSYSATIVDDKSRYTWVYLLKHKSDILQVIPRFFKLIETQFSKVIKVF 493

Query: 19  RSDN 8
           RSDN
Sbjct: 494 RSDN 497


>emb|CAN67587.1| hypothetical protein VITISV_036279 [Vitis vinifera]
          Length = 1034

 Score =  111 bits (277), Expect = 1e-22
 Identities = 55/125 (44%), Positives = 77/125 (61%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGH +  ILSH+     +   D+  LSLKC+ C  SK   L FPL  S A++ FDL+H D
Sbjct: 458 LGHPNTKILSHVLNSDLLGNKDRSSLSLKCDSCKLSKSKTLHFPLHTSRASHCFDLIHSD 517

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WGP +V+S     Y +T +DDHSR TW++ L+ KSEV R    F++ V  QF+  IK +
Sbjct: 518 VWGPSSVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLVYVDNQFSTSIKTL 577

Query: 19  RSDNG 5
            +D+G
Sbjct: 578 HTDSG 582


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  110 bits (276), Expect = 2e-22
 Identities = 58/126 (46%), Positives = 78/126 (61%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGH S ++LS LP L+    +     S  C+VC ++KQ+R  FP+S + +   F L+H D
Sbjct: 95  LGHPSFSVLSSLPVLTS---SSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCD 151

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           +WGPY V S     Y LTIVDD SRA W +LL  KSEV  VL  F++  + QF   +KV+
Sbjct: 152 VWGPYRVPSSCGAVYFLTIVDDFSRAVWTYLLLAKSEVRTVLTNFLVYTEKQFGKSVKVL 211

Query: 19  RSDNGS 2
           RSDNG+
Sbjct: 212 RSDNGT 217


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/126 (45%), Positives = 78/126 (61%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           +GH S  ++  LP +S++    K  L+  CE+C ++K  R  FPLSD+ A   F+ +H D
Sbjct: 187 MGHPSEKVVKLLPPVSNL----KGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCD 242

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           LWG Y   S     Y LTIVDD SRA WI+LL  K+EV R+   FI +V  QF+  +KVV
Sbjct: 243 LWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVV 302

Query: 19  RSDNGS 2
           +SDNG+
Sbjct: 303 QSDNGT 308


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  110 bits (274), Expect = 3e-22
 Identities = 56/126 (44%), Positives = 77/126 (61%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           +GH S  ++  LP +S++    K  L+  CE+C ++K  R  FPLSD+ A   F+ +H D
Sbjct: 268 MGHPSEKVVKLLPLVSNI----KGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCD 323

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           LW  Y   S     Y LTIVDD SRA WI+LL  K+EV R+   FI +V  QF+  +KVV
Sbjct: 324 LWASYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVV 383

Query: 19  RSDNGS 2
           +SDNG+
Sbjct: 384 QSDNGT 389


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/126 (45%), Positives = 78/126 (61%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           +GH S  ++  LP +S++    K  L+  CE+C ++K  R  FPLSD+ A   F+ +H D
Sbjct: 273 MGHPSEKVVKLLPPVSNL----KGSLNKACEICFRAKHXRDKFPLSDNKATRIFEKIHCD 328

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           LWG Y   S     Y LTIVDD SRA WI+LL  K+EV R+   FI +V  QF+  +KVV
Sbjct: 329 LWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVV 388

Query: 19  RSDNGS 2
           +SDNG+
Sbjct: 389 QSDNGT 394


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  109 bits (273), Expect = 3e-22
 Identities = 56/126 (44%), Positives = 79/126 (62%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           +GH S  ++  LP +S++    K  L+  CE+C ++K  R  FPLSD+ A   F+ +H D
Sbjct: 400 MGHPSEKVVKLLPPVSNL----KGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCD 455

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           LWG Y   S     Y LTIVDD SRA WI+LL  K+EV ++   FI +V  QF+ ++KVV
Sbjct: 456 LWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFQMFMSFIAMVDQQFSQIVKVV 515

Query: 19  RSDNGS 2
           +SDNG+
Sbjct: 516 QSDNGT 521


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/124 (41%), Positives = 80/124 (64%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           LGH S      L  +  + K +K+ L + C +C K+KQ  LSFP  ++ + N FDL+HID
Sbjct: 590 LGHPSYEKNDVLHDVLGLPKRNKEDL-VHCSICQKAKQKHLSFPSKNNMSENKFDLIHID 648

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
            WGP+   +     Y LTIVDD+SRATW++L++ K++V ++   F+ +V+TQ+  ++K V
Sbjct: 649 TWGPFATPTTEGYKYFLTIVDDYSRATWVYLMKAKNDVLQIFPDFLKMVETQYGTLVKAV 708

Query: 19  RSDN 8
           RSDN
Sbjct: 709 RSDN 712


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  108 bits (271), Expect = 6e-22
 Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLS-DVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHI 203
           LGH S ++LS LP  S   C       S  C+VC ++KQ+R  FP S + + + F L+H 
Sbjct: 517 LGHPSFSVLSSLPLFSGSSCSVS----SRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHC 572

Query: 202 DLWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKV 23
           D+WGPY V S     Y LTIVDD SR+ W +LL  KSEV  VL  F+   + QF   +K+
Sbjct: 573 DVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKI 632

Query: 22  VRSDNGS 2
           +RSDNG+
Sbjct: 633 IRSDNGT 639


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  108 bits (271), Expect = 6e-22
 Identities = 54/126 (42%), Positives = 75/126 (59%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLSDVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHID 200
           +GH +  ++S +P  S         L+  C+VCH++KQ+R SFPLS +     F+L++ D
Sbjct: 396 MGHPAARVVSLIPESS--VSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCD 453

Query: 199 LWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKVV 20
           LWGPY   S     Y LTI+DD+SR  W++LL  KSE P  L+ F  +   QF   IK V
Sbjct: 454 LWGPYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTV 513

Query: 19  RSDNGS 2
           RSDNG+
Sbjct: 514 RSDNGT 519


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  108 bits (271), Expect = 6e-22
 Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
 Frame = -2

Query: 379 LGHASPTILSHLPFLS-DVCKTDKQQLSLKCEVCHKSKQSRLSFPLSDSYAANNFDLVHI 203
           LGH S ++LS LP  S   C       S  C+VC ++KQ+R  FP S + + + F L+H 
Sbjct: 517 LGHPSFSVLSSLPLFSGSSCSVS----SRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHC 572

Query: 202 DLWGPYTVTSLLNTPYMLTIVDDHSRATWIFLLQHKSEVPRVLERFILLVKTQFAGVIKV 23
           D+WGPY V S     Y LTIVDD SR+ W +LL  KSEV  VL  F+   + QF   +K+
Sbjct: 573 DVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKI 632

Query: 22  VRSDNGS 2
           +RSDNG+
Sbjct: 633 IRSDNGT 639