BLASTX nr result

ID: Rehmannia26_contig00032202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00032202
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78929.1| hypothetical protein (mitochondrion) [Vicia faba]...    76   8e-13
ref|YP_004222348.1| hypothetical protein BevumaM_p115 [Beta vulg...    69   2e-11
ref|NP_064106.1| orf124 gene product (mitochondrion) [Beta vulga...    67   5e-11
ref|YP_173454.1| hypothetical protein NitaMp116 [Nicotiana tabac...    66   3e-09
gb|AGC78869.1| hypothetical protein (mitochondrion) [Vicia faba]       59   8e-08
dbj|BAO50917.1| putative uncharacterized protein (mitochondrion)...    52   5e-06

>gb|AGC78929.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803291|gb|AGC79026.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 110

 Score = 76.3 bits (186), Expect(2) = 8e-13
 Identities = 31/66 (46%), Positives = 47/66 (71%)
 Frame = -2

Query: 273 SITSTAQSAPSDIGGLFSGVCEHYREWMLISGRQLPPQWSIPDFVRTVLGNEAVQSPSFL 94
           S  S AQSAP ++  +F  +C+ Y EW++ +G+QLPP+WS+P  VRTV+G+EA+  P F+
Sbjct: 22  STRSDAQSAPPELERVFDRICDEYAEWVVRAGKQLPPEWSMPGLVRTVIGDEAIHIPGFI 81

Query: 93  KTVFYD 76
           K  + D
Sbjct: 82  KDSYVD 87



 Score = 22.7 bits (47), Expect(2) = 8e-13
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 80  MILGPGSWFFDEGIKLLDLINA 15
           M+ G  SW  +E  + LDLI +
Sbjct: 89  MLYGQNSWLCNEVFQFLDLITS 110


>ref|YP_004222348.1| hypothetical protein BevumaM_p115 [Beta vulgaris subsp. maritima]
           gi|346683221|ref|YP_004842153.1| hypothetical protein
           BemaM_p109 [Beta macrocarpa]
           gi|317905684|emb|CBJ14078.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439863|emb|CBJ17568.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148079|emb|CBJ20741.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500139|emb|CBX24958.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939171|emb|CBL52018.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 124

 Score = 68.9 bits (167), Expect(2) = 2e-11
 Identities = 33/66 (50%), Positives = 45/66 (68%)
 Frame = -2

Query: 273 SITSTAQSAPSDIGGLFSGVCEHYREWMLISGRQLPPQWSIPDFVRTVLGNEAVQSPSFL 94
           S  S AQSAPS +  LF  +C+ Y  ++  +GR LPP+W++PD VRTVLG+EA+Q   FL
Sbjct: 36  STRSDAQSAPSGLDQLFPEICDEYSRYVHEAGRVLPPEWTMPDLVRTVLGDEALQQ-GFL 94

Query: 93  KTVFYD 76
              +YD
Sbjct: 95  TDAYYD 100



 Score = 25.4 bits (54), Expect(2) = 2e-11
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 80  MILGPGSWFFDEGIKLLDLINAS 12
           M+ G  SW  +E + LLDLIN S
Sbjct: 102 MLCGTHSWGCEELLNLLDLINYS 124


>ref|NP_064106.1| orf124 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|9087356|dbj|BAA99500.1| orf124 [Beta vulgaris subsp.
           vulgaris]
          Length = 124

 Score = 67.4 bits (163), Expect(2) = 5e-11
 Identities = 32/66 (48%), Positives = 44/66 (66%)
 Frame = -2

Query: 273 SITSTAQSAPSDIGGLFSGVCEHYREWMLISGRQLPPQWSIPDFVRTVLGNEAVQSPSFL 94
           S  S AQSAPS +   F  +C+ Y  ++  +GR LPP+W++PD VRTVLG+EA+Q   FL
Sbjct: 36  STRSDAQSAPSGLDQFFPEICDEYSRYVHEAGRVLPPEWTMPDLVRTVLGDEALQQ-GFL 94

Query: 93  KTVFYD 76
              +YD
Sbjct: 95  TDAYYD 100



 Score = 25.4 bits (54), Expect(2) = 5e-11
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 80  MILGPGSWFFDEGIKLLDLINAS 12
           M+ G  SW  +E + LLDLIN S
Sbjct: 102 MLCGTHSWGCEELLNLLDLINYS 124


>ref|YP_173454.1| hypothetical protein NitaMp116 [Nicotiana tabacum]
           gi|56806618|dbj|BAD83519.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 125

 Score = 65.9 bits (159), Expect(2) = 3e-09
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -2

Query: 273 SITSTAQSAPSDIGGLFSGVCEHYREWMLISGRQLPPQWSIPDFVRTVLGNEAVQSPSFL 94
           S  S AQSAP ++  LF G+C+   E + + GR+LPP+W+I D ++ V+G+EA   P  L
Sbjct: 35  STRSDAQSAPPELTQLFDGICQKSAELLRLRGRELPPEWNIADLIQAVMGDEAFLIPGHL 94

Query: 93  KTVFYD 76
           +  +YD
Sbjct: 95  QDTYYD 100



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 80  MILGPGSWFFDEGIKLLDLIN 18
           ++ G  SW  ++    LDLIN
Sbjct: 102 LLRGCSSWLLEDLFHFLDLIN 122


>gb|AGC78869.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 107

 Score = 59.3 bits (142), Expect(2) = 8e-08
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = -2

Query: 273 SITSTAQSAPSDIGGLFSGVCEHYREWMLISGRQLPPQWSIPDFVRTVLGNEAVQSPSFL 94
           S  S A SAP+D   +   +     +W+ +SGRQLPP+WS+PD VR V+ ++ + +  FL
Sbjct: 17  STRSDAGSAPTDPVEILDRISTESSKWVDLSGRQLPPEWSMPDLVRAVIADDRIYNEGFL 76

Query: 93  KTVFYD 76
             ++YD
Sbjct: 77  TFLYYD 82



 Score = 22.7 bits (47), Expect(2) = 8e-08
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 80  MILGPGSWFFDEGIKLLDLIN 18
           M+ G  +W  +E +  LDLIN
Sbjct: 84  MLQGQDAWLCEEILTFLDLIN 104


>dbj|BAO50917.1| putative uncharacterized protein (mitochondrion) [Hevea
           brasiliensis]
          Length = 126

 Score = 51.6 bits (122), Expect(2) = 5e-06
 Identities = 24/66 (36%), Positives = 37/66 (56%)
 Frame = -2

Query: 273 SITSTAQSAPSDIGGLFSGVCEHYREWMLISGRQLPPQWSIPDFVRTVLGNEAVQSPSFL 94
           SI S A SAP +   +   + +   +W+  SGRQ+PP+W+  D VR V+G + +     L
Sbjct: 36  SIQSDASSAPLEFEEILDIISKESLKWIERSGRQVPPEWTTQDLVREVIGTDWISIEGLL 95

Query: 93  KTVFYD 76
           +  FYD
Sbjct: 96  RDHFYD 101



 Score = 24.3 bits (51), Expect(2) = 5e-06
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 80  MILGPGSWFFDEGIKLLDLIN 18
           M+ GP SW   +    LDLIN
Sbjct: 103 MLHGPNSWLSQDLFAFLDLIN 123


Top