BLASTX nr result

ID: Rehmannia26_contig00031865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00031865
         (549 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243873.1| PREDICTED: F-box protein CPR30-like [Solanum...    64   3e-08
ref|XP_006366000.1| PREDICTED: F-box/kelch-repeat protein At3g06...    62   9e-08
ref|XP_004248467.1| PREDICTED: F-box protein At3g07870-like [Sol...    61   2e-07
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    59   8e-07
ref|XP_006365999.1| PREDICTED: F-box/kelch-repeat protein At3g06...    57   4e-06
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    57   4e-06
ref|XP_006366030.1| PREDICTED: F-box protein At3g07870-like [Sol...    56   5e-06
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    56   6e-06

>ref|XP_004243873.1| PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
          Length = 485

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/69 (46%), Positives = 47/69 (68%)
 Frame = -2

Query: 548 VDFEGGPGMILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYASNYMESLA 369
           +D  GG   ++GFRT+G++L+SA  +G+VSY+P     + LG+HGT  SF+   + ESLA
Sbjct: 353 IDLRGGFRNVVGFRTHGELLISARMVGMVSYNPKRRNISYLGIHGTNRSFHGEPFFESLA 412

Query: 368 LLAEGKEAR 342
           L+  GKE R
Sbjct: 413 LV--GKEDR 419


>ref|XP_006366000.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           tuberosum]
          Length = 384

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 30/62 (48%), Positives = 40/62 (64%)
 Frame = -2

Query: 548 VDFEGGPGMILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYASNYMESLA 369
           ++   G   I+GFR NG+VL S  N  LVSYDP +G++  L + G+  SFY  NY+ESL 
Sbjct: 311 INLVAGMEKIVGFRNNGEVLFSTRNNDLVSYDPNSGRNRGLRIQGSSRSFYVQNYVESLI 370

Query: 368 LL 363
           LL
Sbjct: 371 LL 372


>ref|XP_004248467.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
          Length = 385

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/62 (46%), Positives = 40/62 (64%)
 Frame = -2

Query: 548 VDFEGGPGMILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYASNYMESLA 369
           ++   G   ++GFR NG+VL S  +  LVSYDP +G++  L + G+  SFY  NYMESL 
Sbjct: 312 INLVAGMERVVGFRKNGEVLFSTRSSDLVSYDPNSGQNRGLRIQGSSRSFYVQNYMESLI 371

Query: 368 LL 363
           LL
Sbjct: 372 LL 373


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 27/65 (41%), Positives = 44/65 (67%)
 Frame = -2

Query: 527 GMILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYASNYMESLALLAEGKE 348
           GM+LG R NG++L+ + +  +V Y+P      +LG++G + +FY  +Y+ESLALL EGK 
Sbjct: 310 GMVLGLRENGEMLMESKSGEVVLYNPYIRLMKNLGIYGAEGTFYLDSYVESLALLNEGKG 369

Query: 347 ARERL 333
             E++
Sbjct: 370 ISEKV 374


>ref|XP_006365999.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           tuberosum]
          Length = 238

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = -2

Query: 521 ILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYASNYMESLAL 366
           ++GFR NG+VL S  +  LVSYDP +G++  LG+  +   FY  NYMESL L
Sbjct: 170 VVGFRNNGEVLFSTRSNDLVSYDPNSGQNRGLGIQWSSHPFYVQNYMESLIL 221


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 32/67 (47%), Positives = 38/67 (56%)
 Frame = -2

Query: 536 GGPGMILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYASNYMESLALLAE 357
           GG G +LG R N +VLL      L+SYDP   +S  LG+ G   SFYA  YMESL LL  
Sbjct: 307 GGIGKVLGLRNNVEVLLVGGQGELISYDPWYQRSKSLGISGESCSFYAGIYMESLVLLKG 366

Query: 356 GKEARER 336
            K +  R
Sbjct: 367 RKGSISR 373


>ref|XP_006366030.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum]
          Length = 393

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/61 (42%), Positives = 35/61 (57%)
 Frame = -2

Query: 548 VDFEGGPGMILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYASNYMESLA 369
           ++   G   ++GFR NG+VL S      VSYDP +G++  LG+ G    FY  NY ESL 
Sbjct: 311 INLVAGMEKVVGFRNNGEVLFSTRRNDPVSYDPNSGRNTSLGIQGVSSLFYVQNYRESLI 370

Query: 368 L 366
           L
Sbjct: 371 L 371


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = -2

Query: 548 VDFEGGPGMILGFRTNGDVLLSADNLGLVSYDPVTGKSADLGVHGTKDSFYAS-NYMESL 372
           VD   G GM LG R NG++L+++ N  LVSY P       LG+ G +DSF+    ++ESL
Sbjct: 309 VDPSQGLGMALGCRENGEMLMTSRNGELVSYKPENQIVKGLGIRGAQDSFFLDYTFVESL 368

Query: 371 ALLAEGK 351
           ALL EGK
Sbjct: 369 ALLNEGK 375


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