BLASTX nr result
ID: Rehmannia26_contig00031559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00031559
(381 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 70 4e-10
gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japo... 65 7e-09
gb|AAV43829.1| hypothetical protein [Oryza sativa Japonica Group... 65 7e-09
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 65 9e-09
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 65 9e-09
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ... 62 8e-08
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 62 8e-08
gb|EMJ25902.1| hypothetical protein PRUPE_ppa025398mg, partial [... 62 1e-07
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 60 2e-07
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 60 2e-07
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 60 4e-07
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 59 5e-07
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 59 7e-07
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo... 59 7e-07
gb|ABD33127.1| Hemopexin [Medicago truncatula] 59 9e-07
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 57 2e-06
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 57 2e-06
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 57 2e-06
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group] 57 3e-06
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 57 3e-06
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/115 (37%), Positives = 58/115 (50%)
Frame = -1
Query: 345 GKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSA 166
GK+ F FD RW+ DG+ I Q WN D G QF +K+ CR A+ W KS
Sbjct: 20 GKQNFRFDKRWIGKDGLLEAISQGWNLD-SGFREGQFVEKLTNCRRAISKWRKSLIPFGR 78
Query: 165 VIIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
I+ KA L ++ E L L +AY++EE YW QK+R+ W+K G
Sbjct: 79 QTIEDLKAEL-DVAQRDDDRSREEITELTLRLKEAYRDEEQYWYQKSRSLWMKLG 132
>gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japonica Group]
Length = 763
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/109 (32%), Positives = 56/109 (51%)
Frame = -1
Query: 327 FDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVIIDRC 148
+++ W + + D V+ QAW L F+ K+ L+ WSKSK N I+
Sbjct: 541 YEAIWEREESFDSVVQQAWGEGEVVRNLGDFKTKMAYTMDELVKWSKSKIGNIKKGIESR 600
Query: 147 KARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
+ +L E+RM G D PE +K L + + EE +W Q+++ WLK+G
Sbjct: 601 RKKLGELRMAGMLDSEPEVKKIKEQLQEMLRREEIWWRQRSQITWLKEG 649
>gb|AAV43829.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55168037|gb|AAV43905.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 796
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/109 (32%), Positives = 56/109 (51%)
Frame = -1
Query: 327 FDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVIIDRC 148
+++ W + + D V+ QAW L F+ K+ L+ WSKSK N I+
Sbjct: 574 YEAIWEREESFDSVVQQAWGEGEVVRNLGDFKTKMAYTMDELVKWSKSKIGNIKKGIESR 633
Query: 147 KARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
+ +L E+RM G D PE +K L + + EE +W Q+++ WLK+G
Sbjct: 634 RKKLGELRMAGMLDSEPEVKKIKEQLQEMLRREEIWWRQRSQITWLKEG 682
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 65.1 bits (157), Expect = 9e-09
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -1
Query: 336 RFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVII 157
+F FD R+L + + I + W+ GT + ++ CR +L +W K NS I
Sbjct: 202 QFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKI 260
Query: 156 DRCKARLSEIRMVGFSDKWPEWCN---LKGVLDKAYKEEEGYWSQKARNKWLKDG 1
++ +A L + + + WP + LK L KAY+EEE YW QK+R KWL+ G
Sbjct: 261 NQLEAALEKEQSL----VWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSG 311
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 65.1 bits (157), Expect = 9e-09
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -1
Query: 336 RFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVII 157
+F FD R+L + + I + W+ GT + ++ CR +L +W K NS I
Sbjct: 205 QFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKI 263
Query: 156 DRCKARLSEIRMVGFSDKWPEWCN---LKGVLDKAYKEEEGYWSQKARNKWLKDG 1
++ +A L + + + WP + LK L KAY+EEE YW QK+R KWL+ G
Sbjct: 264 NQLEAALEKEQSL----VWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSG 314
>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1197
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/114 (30%), Positives = 58/114 (50%)
Frame = -1
Query: 342 KKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAV 163
K F +D R + + I +I AWN D+ + ++K+ CR A+I+W+K + NS
Sbjct: 235 KGLFRYDRRLKENEEIKDLIAAAWNEDLSDSV----EKKLSRCRRAIISWTKETQRNSQK 290
Query: 162 IIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
II+ K +L + ++ +D + L AY EE +W Q++R WL G
Sbjct: 291 IIEALKVKLEQAMVIPVNDVC-LLVQINSELSAAYLAEEAFWKQRSRQNWLSLG 343
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/114 (34%), Positives = 56/114 (49%)
Frame = -1
Query: 342 KKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAV 163
K F FD R + I QAWN + R + Q +++ CR AL W + +NS
Sbjct: 203 KGNFRFDKRLFNQPLVKEAIQQAWNGNQRVGGM-QVLERLKKCRSALSRWKQENNSNSLT 261
Query: 162 IIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
I + +A L + GF + LK L KA ++EE +WSQK+R KW+ G
Sbjct: 262 CISQARAALELEQSSGFPRSKVVF-TLKNDLCKANQDEETFWSQKSRAKWMHGG 314
>gb|EMJ25902.1| hypothetical protein PRUPE_ppa025398mg, partial [Prunus persica]
Length = 320
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = -1
Query: 315 WLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVIIDRCKARL 136
W Q + + +I AWN GT +YQ +KI R+ L+ W +S + I R +++L
Sbjct: 3 WTQHEDCESIIANAWNTSFTGTLMYQVCEKIKTTRIQLMQWQRSMFGTTKAEIQRVRSQL 62
Query: 135 SEI-RMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
+ R + + L LD EE +W Q+++ WLK+G
Sbjct: 63 DVVWRQPNSENTTATYHLLMSQLDSLLSREEAFWKQRSKVSWLKEG 108
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/127 (28%), Positives = 59/127 (46%)
Frame = -1
Query: 381 LLLLETDTPKFVGKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLAL 202
LLL +T K ++ W + + VI +AW + L K+ + L
Sbjct: 182 LLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKL 241
Query: 201 INWSKSKRTNSAVIIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKAR 22
++WSK K N I + +L E+R +G D E ++K L++ EE +W Q++R
Sbjct: 242 VSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSR 301
Query: 21 NKWLKDG 1
WLK+G
Sbjct: 302 ITWLKEG 308
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/127 (28%), Positives = 59/127 (46%)
Frame = -1
Query: 381 LLLLETDTPKFVGKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLAL 202
LLL +T K ++ W + + VI +AW + L K+ + L
Sbjct: 207 LLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKL 266
Query: 201 INWSKSKRTNSAVIIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKAR 22
++WSK K N I + +L E+R +G D E ++K L++ EE +W Q++R
Sbjct: 267 VSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSR 326
Query: 21 NKWLKDG 1
WLK+G
Sbjct: 327 ITWLKEG 333
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
Arabidopsis thaliana retrotransposon Ta11-1
gi|976278|gb|AAA75254.1| reverse transcriptase
[Arabidopsis thaliana]
Length = 1333
Score = 59.7 bits (143), Expect = 4e-07
Identities = 40/111 (36%), Positives = 52/111 (46%)
Frame = -1
Query: 333 FTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVIID 154
F FD R + I QAWN R L K+ CR AL W K NS+ I
Sbjct: 242 FRFDKRLFNQPNVKETIVQAWNGSQRNENLLVLD-KLKHCRSALSRWKKENNINSSTRIT 300
Query: 153 RCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
+ +A L + GF + +LK L KA +EE +WSQK+R KW+ G
Sbjct: 301 QARAALELEQSSGFP-RADLVFSLKNDLCKANHDEEVFWSQKSRAKWMHSG 350
>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 59.3 bits (142), Expect = 5e-07
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Frame = -1
Query: 378 LLLETDTPKFVGKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQ---FQQKIGLCRL 208
LL D K K F +D R D + ++ +AWN LY ++KI CRL
Sbjct: 62 LLTHFDLSKKKKKGVFRYDRRLKNNDEVTALVQEAWN-------LYDTDIVEEKISRCRL 114
Query: 207 ALINWSKSKRTNSAVIIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQK 28
++ WS++K+ +S +I+ + +L E M + L AYK EE YW Q+
Sbjct: 115 EIVKWSRAKQQSSQKLIEENRQKLEE-AMSSQDHNQELLSTINTNLLLAYKAEEEYWKQR 173
Query: 27 ARNKWLKDG 1
+R WL G
Sbjct: 174 SRQLWLALG 182
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Frame = -1
Query: 378 LLLETDTPKFVGKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALI 199
++L TD G F F+S W + ++++ W G + + + C+ +L
Sbjct: 87 IVLSTDNVSRKGIPLFRFESYWAEEPESSRIVEECWLGVTNGRPISTWNSNLNRCKKSLK 146
Query: 198 NWSKSKRTNS-AVIIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKAR 22
+WS+SK S V I C L +++++ + L L + + +EE +W Q++R
Sbjct: 147 SWSRSKFPKSLKVKIKACIEELDDLQVLEPFSSSDKQVELSSKLSELWIKEEKFWHQRSR 206
Query: 21 NKWLKDG 1
KWLK G
Sbjct: 207 VKWLKSG 213
>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
Length = 1076
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/113 (28%), Positives = 54/113 (47%)
Frame = -1
Query: 339 KRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVI 160
K ++ W + + VI +AW + L K+ + L++WSK K N
Sbjct: 2 KIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKK 61
Query: 159 IDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
I + +L E+R +G D E ++K L++ EE +W Q++R WLK+G
Sbjct: 62 IKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEG 114
>gb|ABD33127.1| Hemopexin [Medicago truncatula]
Length = 236
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/114 (28%), Positives = 56/114 (49%)
Frame = -1
Query: 342 KKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAV 163
K++F F++ WL +D V+ W +D+ + + Q C L W +S R
Sbjct: 94 KRQFRFENSWLVEPELDSVVHDGWFHDVNEPMITRLQH----CTEELDQWGRSLRKRYKE 149
Query: 162 IIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
I +CK + E++ +G + E LK L+ +E+ +W Q+A+ W+KDG
Sbjct: 150 DIQKCKDIIEELQGLGDVETDGEIVLLKEKLNLLLIQEDTFWKQRAKIFWMKDG 203
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/127 (28%), Positives = 60/127 (47%)
Frame = -1
Query: 381 LLLLETDTPKFVGKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLAL 202
L L +T+T K + F FD R L+ + WN I G + ++ CR A+
Sbjct: 608 LSLEKTETRKM---RPFRFDKRLLEVPHFKTYVKAGWNKAINGQRKH-LPDQVRTCRQAM 663
Query: 201 INWSKSKRTNSAVIIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKAR 22
NS + I++ +A L + + +++ L AY++EE YW QK+R
Sbjct: 664 AKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSR 723
Query: 21 NKWLKDG 1
N+W+K+G
Sbjct: 724 NQWMKEG 730
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/127 (28%), Positives = 60/127 (47%)
Frame = -1
Query: 381 LLLLETDTPKFVGKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLAL 202
L L +T+T K + F FD R L+ + WN I G + ++ CR A+
Sbjct: 588 LSLEKTETRKM---RPFRFDKRLLEVPHFKTYVKAGWNKAINGQRKH-LPDQVRTCRQAM 643
Query: 201 INWSKSKRTNSAVIIDRCKARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKAR 22
NS + I++ +A L + + +++ L AY++EE YW QK+R
Sbjct: 644 AKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSR 703
Query: 21 NKWLKDG 1
N+W+K+G
Sbjct: 704 NQWMKEG 710
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 57.4 bits (137), Expect = 2e-06
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = -1
Query: 357 PKFVGKKRFTFDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKR 178
P K F FD R + + I ++ + W + + LY KI CR ++I W+K +
Sbjct: 176 PPLKRSKPFRFDRRLREKEEIRALVKEVWELARQDSVLY----KISRCRQSIIKWTKEQN 231
Query: 177 TNSAVIIDRCKARLSEIRMVGFSDKWPEWC-NLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
+NSA I + + L D P ++ L+ AY++EE +W Q +R +WL G
Sbjct: 232 SNSAKAIKKAQQALESALSADIPD--PSLIGSITQELEAAYRQEELFWKQWSRVQWLNSG 289
>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
Length = 1205
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/109 (29%), Positives = 52/109 (47%)
Frame = -1
Query: 327 FDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVIIDRC 148
F++ W + + + ++W+ L + K+ L WS+ K N I+RC
Sbjct: 270 FEAVWERVKSFNSIEHESWDDGGLAKNLGDVRTKLAYTMENLKRWSRDKIGNIKKSIERC 329
Query: 147 KARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
+ L E+RM G D P+ LK L + EE +W Q++R WLK+G
Sbjct: 330 RRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRSRITWLKEG 378
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/109 (29%), Positives = 52/109 (47%)
Frame = -1
Query: 327 FDSRWLQWDGIDLVIDQAWNYDIRGTALYQFQQKIGLCRLALINWSKSKRTNSAVIIDRC 148
F++ W + + + ++W+ L + K+ L WS+ K N I+RC
Sbjct: 492 FEAVWERVKSFNSIEHESWDDGGLAKNLGDVRTKLAYTMENLKRWSRDKIGNIKKSIERC 551
Query: 147 KARLSEIRMVGFSDKWPEWCNLKGVLDKAYKEEEGYWSQKARNKWLKDG 1
+ L E+RM G D P+ LK L + EE +W Q++R WLK+G
Sbjct: 552 RRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRSRITWLKEG 600